The gut microbiota influences neurodegenerative disease progression, including Alzheimer’s disease (AD), through microbial metabolites like amyloids in bacterial biofilms, such as the curli protein in Eshcherichia coli biofilm. In this context, the study focuses on two key aspects, namely, (i) how cross-kingdom bacterial biofilm proteins accelerate Aβ42 aggregation and induce neurotoxicity and (ii) whether a nanochaperone with hydrophobic sheets and hydrophilic polyphenolic moieties could inhibit cross-seeded aggregation. Considering this, we chemically synthesized and further characterized gallic acid-conjugated molybdenum disulfide quantum dots (GA@MoS2 QDs, ∼9.6 ± 4.2 nm) using spectroscopy and microscopy techniques, which showed ∼1.84-fold reduction in E. coli biofilm thickness, indicating interaction with biofilm components. The presence of the curli protein in E. coli was confirmed by dot blot and MALDI-TOF studies. Subsequent biophysical studies showed that isolated E. coli biofilm protein accelerated Aβ42 aggregation (heterotypic) by ∼6.76-fold, while GA@MoS2 QDs reduced this heterotypic aggregation by ∼9.49-fold reduction in Aβ42+ECBFP fluorescence relative to Aβ42 aggregates. In vitro studies with SH-SY5Y cells showed that heterotypic protein aggregation led to increased ROS production, intracellular calcium influx, and apoptosis induction, which were mitigated by GA@MoS2 QDs. The neuroprotective effect of GA@MoS2 QDs was also studied on Caenorhabditis elegans. Overall, the present studies suggested that the bacterial amyloid proteins may play a crucial role in Aβ42 aggregation, suggesting that targeting coaggregation could provide a novel therapeutic approach for the treatment of early onset AD.
{"title":"Nanoengineered Polyphenol-Quantum Dot Conjugates Inhibit Biofilm Protein-Aβ42 Heterotypic Fibrillogenesis, Restore Synaptic Transmission, and Suppress Apoptosis in Alzheimer’s Disease","authors":"Trilok Chand Saini, , , Shiwani Randhawa, , , Manik Bathla, , , Anjali Nisha, , , Nandini Teji, , and , Amitabha Acharya*, ","doi":"10.1021/acschemneuro.5c00467","DOIUrl":"10.1021/acschemneuro.5c00467","url":null,"abstract":"<p >The gut microbiota influences neurodegenerative disease progression, including Alzheimer’s disease (AD), through microbial metabolites like amyloids in bacterial biofilms, such as the curli protein in <i>Eshcherichia coli</i> biofilm. In this context, the study focuses on two key aspects, namely, (i) how cross-kingdom bacterial biofilm proteins accelerate Aβ42 aggregation and induce neurotoxicity and (ii) whether a nanochaperone with hydrophobic sheets and hydrophilic polyphenolic moieties could inhibit cross-seeded aggregation. Considering this, we chemically synthesized and further characterized gallic acid-conjugated molybdenum disulfide quantum dots (GA@MoS<sub>2</sub> QDs, ∼9.6 ± 4.2 nm) using spectroscopy and microscopy techniques, which showed ∼1.84-fold reduction in <i>E. coli</i> biofilm thickness, indicating interaction with biofilm components. The presence of the curli protein in <i>E. coli</i> was confirmed by dot blot and MALDI-TOF studies. Subsequent biophysical studies showed that isolated <i>E. coli</i> biofilm protein accelerated Aβ42 aggregation (heterotypic) by ∼6.76-fold, while GA@MoS<sub>2</sub> QDs reduced this heterotypic aggregation by ∼9.49-fold reduction in Aβ42+EC<sub>BFP</sub> fluorescence relative to Aβ42 aggregates. <i>In vitro</i> studies with SH-SY5Y cells showed that heterotypic protein aggregation led to increased ROS production, intracellular calcium influx, and apoptosis induction, which were mitigated by GA@MoS<sub>2</sub> QDs. The neuroprotective effect of GA@MoS<sub>2</sub> QDs was also studied on <i>Caenorhabditis elegans</i>. Overall, the present studies suggested that the bacterial amyloid proteins may play a crucial role in Aβ42 aggregation, suggesting that targeting coaggregation could provide a novel therapeutic approach for the treatment of early onset AD.</p>","PeriodicalId":13,"journal":{"name":"ACS Chemical Neuroscience","volume":"16 23","pages":"4458–4478"},"PeriodicalIF":3.9,"publicationDate":"2025-11-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145547418","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-11-19DOI: 10.1021/acschemneuro.5c00397
Yongli Qi, , , Jaehyeon Ryu, , , Dongyeol Jang, , , Bella Schaub, , , Yieljae Shin, , , Tianyu Bai, , , Gen Li, , , Joshua P. Aronson, , , James C. Leiter, , and , Hui Fang*,
Electrochemical sensors rely on reference electrodes (REs) to provide stable potential standards, ensuring accurate and reliable detection. The development of biocompatible, stable, and miniaturized REs to replace conventional Ag/AgCl electrodes is crucial for translating electrochemical sensing for human applications. This study evaluates the performance of thin-film electrodes made from gold (Au), platinum (Pt), poly(3,4-ethylenedioxythiophene)-polystyrenesulfonate (PEDOT:PSS), and platinum–iridium (Pt–Ir) as REs for fast-scan cyclic voltammetry (FSCV), a widely used technique for real-time neurotransmitter detection. Using dopamine (DA) sensing as a model platform, our results demonstrate that Pt–Ir electrodes provide the necessary stable potential, low drift, and high reproducibility for FSCV sensing, even at a reduced size of 0.1 mm × 0.1 mm. Additionally, Pt–Ir exhibited performance comparable to Ag/AgCl electrodes across various pH levels and in the presence of biofouling agents. These findings highlight Pt–Ir as a promising alternative RE, with strong potential for integration into miniaturized electrochemical sensors for both preclinical and clinical applications.
电化学传感器依靠参考电极(REs)提供稳定的电位标准,确保检测的准确性和可靠性。开发生物相容性、稳定性和小型化的REs来取代传统的Ag/AgCl电极是将电化学传感转化为人类应用的关键。本研究评估了由金(Au),铂(Pt),聚(3,4-乙烯二氧噻吩)-聚苯乙烯磺酸盐(PEDOT:PSS)和铂-铱(Pt- ir)作为REs制成的薄膜电极在快速扫描循环伏安法(FSCV)中的性能,FSCV是一种广泛用于实时神经递质检测的技术。使用多巴胺(DA)传感作为模型平台,我们的研究结果表明,Pt-Ir电极为FSCV传感提供了必要的稳定电位、低漂移和高再现性,即使在0.1 mm × 0.1 mm的尺寸下也是如此。此外,Pt-Ir在不同的pH水平和存在生物污垢剂的情况下表现出与Ag/AgCl电极相当的性能。这些发现强调了Pt-Ir作为一种有前途的替代稀土,具有集成到小型化电化学传感器中用于临床前和临床应用的强大潜力。
{"title":"Thin-Film Reference Electrodes for Fast-Scan Cyclic Voltammetry","authors":"Yongli Qi, , , Jaehyeon Ryu, , , Dongyeol Jang, , , Bella Schaub, , , Yieljae Shin, , , Tianyu Bai, , , Gen Li, , , Joshua P. Aronson, , , James C. Leiter, , and , Hui Fang*, ","doi":"10.1021/acschemneuro.5c00397","DOIUrl":"10.1021/acschemneuro.5c00397","url":null,"abstract":"<p >Electrochemical sensors rely on reference electrodes (REs) to provide stable potential standards, ensuring accurate and reliable detection. The development of biocompatible, stable, and miniaturized REs to replace conventional Ag/AgCl electrodes is crucial for translating electrochemical sensing for human applications. This study evaluates the performance of thin-film electrodes made from gold (Au), platinum (Pt), poly(3,4-ethylenedioxythiophene)-polystyrenesulfonate (PEDOT:PSS), and platinum–iridium (Pt–Ir) as REs for fast-scan cyclic voltammetry (FSCV), a widely used technique for real-time neurotransmitter detection. Using dopamine (DA) sensing as a model platform, our results demonstrate that Pt–Ir electrodes provide the necessary stable potential, low drift, and high reproducibility for FSCV sensing, even at a reduced size of 0.1 mm × 0.1 mm. Additionally, Pt–Ir exhibited performance comparable to Ag/AgCl electrodes across various pH levels and in the presence of biofouling agents. These findings highlight Pt–Ir as a promising alternative RE, with strong potential for integration into miniaturized electrochemical sensors for both preclinical and clinical applications.</p>","PeriodicalId":13,"journal":{"name":"ACS Chemical Neuroscience","volume":"16 23","pages":"4420–4428"},"PeriodicalIF":3.9,"publicationDate":"2025-11-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://pubs.acs.org/doi/pdf/10.1021/acschemneuro.5c00397","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145547352","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-11-17DOI: 10.1021/acschemneuro.5c00379
Mallesh Rathnam, , , Haley Hunter, , , Pallabi Sil Paul, , , Ralf Schirrmacher, , , Michael J. Serpe, , and , Satyabrata Kar*,
Self-aggregation of amyloid-β (Aβ) peptide plays a key role in the pathogenesis of Alzheimer’s disease (AD), the most prevalent cause of dementia affecting the elderly population. The development of an effective treatment for AD pathology remains elusive due to the presence of the blood-brain barrier (BBB) and the heterogeneous nature of disease progression. Recently, we reported that FDA-approved native poly(d,l-lactic-co-glycolic acid) (PLGA) nanoparticles without any conjugated/encapsulated agent can attenuate Aβ aggregation/toxicity in cellular and animal models of AD. Given the limitation associated with the fast clearance of the native PLGA by the reticuloendothelial system (RES), in the present study, we synthesized PEGylated native PLGA nanoparticles (PEG–PLGA-1) to reduce their clearance via the RES and evaluated their effects on Aβ aggregation/toxicity after biochemical and structural characterization. Determined with Thioflavin T kinetic assay, dynamic light scattering and fluorescence imaging, it was revealed that the native PEG–PLGA-1, which exhibits increased stability, not only inhibits the aggregation of Aβ peptides, but also triggers the disassembly of Aβ aggregates. Additionally, we showed that PEG–PLGA-1 are nontoxic and can significantly enhance the viability of mouse primary cortical cultured neurons against Aβ-mediated toxicity. Collectively, these results suggest that native PEG–PLGA-1 nanoparticles can inhibit Aβ aggregation and trigger disassembly of Aβ aggregates and can protect neurons against Aβ-mediated toxicity, thus suggesting their unique therapeutic potential in the treatment of AD pathology.
淀粉样蛋白-β (a β)肽的自聚集在阿尔茨海默病(AD)的发病机制中起关键作用,阿尔茨海默病是影响老年人的最常见的痴呆症原因。由于血脑屏障(BBB)的存在和疾病进展的异质性,开发一种有效治疗AD病理的方法仍然难以捉摸。最近,我们报道了fda批准的天然聚(d,l-乳酸-羟基乙酸)(PLGA)纳米颗粒不含任何缀合/封装剂,可以减轻AD细胞和动物模型中的Aβ聚集/毒性。考虑到网状内皮系统(RES)对天然PLGA的快速清除的局限性,在本研究中,我们合成了聚乙二醇化的天然PLGA纳米颗粒(PEG-PLGA-1),以减少其通过RES的清除,并通过生化和结构表征评估了其对Aβ聚集/毒性的影响。通过硫黄素T动力学分析、动态光散射和荧光成像分析,发现天然PEG-PLGA-1不仅抑制了Aβ肽的聚集,而且还引发了Aβ聚集体的分解。此外,我们发现PEG-PLGA-1无毒,可以显著提高小鼠皮层培养的原代神经元抗a β介导的毒性的活力。综上所述,这些结果表明,天然PEG-PLGA-1纳米颗粒可以抑制Aβ聚集并触发Aβ聚集物的分解,并可以保护神经元免受Aβ介导的毒性,从而表明它们在治疗AD病理方面具有独特的治疗潜力。
{"title":"Native PEG–PLGA Attenuates β-Amyloid Aggregation and Toxicity under In Vitro Conditions","authors":"Mallesh Rathnam, , , Haley Hunter, , , Pallabi Sil Paul, , , Ralf Schirrmacher, , , Michael J. Serpe, , and , Satyabrata Kar*, ","doi":"10.1021/acschemneuro.5c00379","DOIUrl":"10.1021/acschemneuro.5c00379","url":null,"abstract":"<p >Self-aggregation of amyloid-β (Aβ) peptide plays a key role in the pathogenesis of Alzheimer’s disease (AD), the most prevalent cause of dementia affecting the elderly population. The development of an effective treatment for AD pathology remains elusive due to the presence of the blood-brain barrier (BBB) and the heterogeneous nature of disease progression. Recently, we reported that FDA-approved native poly(<span>d</span>,<span>l</span>-lactic-<i>co</i>-glycolic acid) (PLGA) nanoparticles without any conjugated/encapsulated agent can attenuate Aβ aggregation/toxicity in cellular and animal models of AD. Given the limitation associated with the fast clearance of the native PLGA by the reticuloendothelial system (RES), in the present study, we synthesized PEGylated native PLGA nanoparticles (PEG–PLGA-1) to reduce their clearance via the RES and evaluated their effects on Aβ aggregation/toxicity after biochemical and structural characterization. Determined with Thioflavin T kinetic assay, dynamic light scattering and fluorescence imaging, it was revealed that the native PEG–PLGA-1, which exhibits increased stability, not only inhibits the aggregation of Aβ peptides, but also triggers the disassembly of Aβ aggregates. Additionally, we showed that PEG–PLGA-1 are nontoxic and can significantly enhance the viability of mouse primary cortical cultured neurons against Aβ-mediated toxicity. Collectively, these results suggest that native PEG–PLGA-1 nanoparticles can inhibit Aβ aggregation and trigger disassembly of Aβ aggregates and can protect neurons against Aβ-mediated toxicity, thus suggesting their unique therapeutic potential in the treatment of AD pathology.</p>","PeriodicalId":13,"journal":{"name":"ACS Chemical Neuroscience","volume":"16 23","pages":"4446–4457"},"PeriodicalIF":3.9,"publicationDate":"2025-11-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145538293","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-11-15DOI: 10.1021/acschemneuro.5c00673
Amanpreet Parihar, , , Amy Praetzel, , , Violeta Toader, , , Nathalie Marcal, , , Melissa Pestemalciyan, , , Ehsan Mohammadifar, , , Rainer Haag, , , Christopher J. Barrett, , , Timothy E. Kennedy*, , and , Linda Reven*,
Surfaces coated with the hyperbranched dendritic polyglycerol amine, dPGA, a nonprotein macromolecular biomimetic of polylysine, have been shown to provide enhanced support for stable long-term culture of embryonic rat neocortical neurons and human neurons derived from induced pluripotent stem cells (iPSCs). Here, we investigate the physical properties of surface-adsorbed dPGA to understand how it provides better support for cell attachment, survival, and growth. High-molecular-weight dPGA (MW 550 kDa) with ∼30% amine functionalization was deposited on silicon wafers from PBS (pH 7.4) solutions to measure the layer thickness and density by ellipsometry and surface roughness and texture by atomic force microscopy (AFM). Colloidal silica (dia ∼ 100 nm) was used as a substrate to measure surface charge (zeta potential), adsorbed amounts by thermal gravimetric analysis (TGA), and molecular mobility by solid-state NMR spectroscopy. We found that the dPGA film properties were dependent on the immersion time in the dPGA coating solution as well as the storage conditions of dPGA solutions. Upon immobilization, dPGA retains a globular but flattened shape. Chain mobility is reduced but the adsorbed dPGA still can be considered a highly flexible polymer that rearranges to present a higher density of positive surface charges as compared to dPGA in solution. Coated surfaces prepared with different deposition times were tested for the capacity to support cells in culture.
{"title":"Characterization of Dendritic Polyglycerol Amine Layers as Coatings for Improved Neural Cell Growth Surfaces","authors":"Amanpreet Parihar, , , Amy Praetzel, , , Violeta Toader, , , Nathalie Marcal, , , Melissa Pestemalciyan, , , Ehsan Mohammadifar, , , Rainer Haag, , , Christopher J. Barrett, , , Timothy E. Kennedy*, , and , Linda Reven*, ","doi":"10.1021/acschemneuro.5c00673","DOIUrl":"10.1021/acschemneuro.5c00673","url":null,"abstract":"<p >Surfaces coated with the hyperbranched dendritic polyglycerol amine, dPGA, a nonprotein macromolecular biomimetic of polylysine, have been shown to provide enhanced support for stable long-term culture of embryonic rat neocortical neurons and human neurons derived from induced pluripotent stem cells (iPSCs). Here, we investigate the physical properties of surface-adsorbed dPGA to understand how it provides better support for cell attachment, survival, and growth. High-molecular-weight dPGA (MW 550 kDa) with ∼30% amine functionalization was deposited on silicon wafers from PBS (pH 7.4) solutions to measure the layer thickness and density by ellipsometry and surface roughness and texture by atomic force microscopy (AFM). Colloidal silica (dia ∼ 100 nm) was used as a substrate to measure surface charge (zeta potential), adsorbed amounts by thermal gravimetric analysis (TGA), and molecular mobility by solid-state NMR spectroscopy. We found that the dPGA film properties were dependent on the immersion time in the dPGA coating solution as well as the storage conditions of dPGA solutions. Upon immobilization, dPGA retains a globular but flattened shape. Chain mobility is reduced but the adsorbed dPGA still can be considered a highly flexible polymer that rearranges to present a higher density of positive surface charges as compared to dPGA in solution. Coated surfaces prepared with different deposition times were tested for the capacity to support cells in culture.</p>","PeriodicalId":13,"journal":{"name":"ACS Chemical Neuroscience","volume":"16 23","pages":"4511–4518"},"PeriodicalIF":3.9,"publicationDate":"2025-11-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145522439","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-11-13DOI: 10.1021/acschemneuro.5c00527
Pablo S. Cavagnero, , , Yaíma Sánchez, , , Brian Fell, , , Oscar Ramírez Molina, , , Javiera Gavilán, , , Efraín A. Polo, , , Jorge Fuentealba, , , Margarita Gutierrez, , , Claudio A. Jiménez*, , and , Jhon J. López*,
Alzheimer’s disease (AD) is a neurodegenerative disorder marked by the accumulation of β-amyloid (Aβ) peptides, which disrupt neuronal homeostasis through their neurotoxic effects. Aβ aggregates interfere with synaptic function by interacting with nicotinic acetylcholine receptors (nAChRs), particularly the α7 subtype, thereby impairing cholinergic signaling, which is crucial for cognition and memory. Pharmacological advancements have identified Positive Allosteric Modulators (PAMs) as promising therapeutic agents to counteract Aβ neurotoxicity. PAMs enhance nAChR activity by binding to allosteric sites, thereby reducing Aβ-induced neurotoxicity without competing with acetylcholine. This study evaluates 3-((6-(phenylethynyl)pyridine-3-yl)oxy)quinuclidine (EQ-04), a novel PAM with high selectivity for the α7 nAChR subtype, demonstrating neuroprotective potential. In vitro analyses using PC-12 cells evaluated the cytotoxic and neuroprotective properties of EQ-04. Cytotoxicity assays confirmed EQ-04’s safety, showing no adverse effects on cell viability across concentrations. EQ-04 significantly enhanced cell viability by 37% at 1 nM against Aβ toxicity and inhibited Aβ aggregation. These findings highlight the potential of EQ-04 as a neuroprotective agent for Alzheimer’s disease (AD) therapy, warranting further investigation into its pharmacokinetics and in vivo efficacy.
{"title":"Neuroprotective Activity of 3-((6-(Phenylethynyl)pyridin-3-yl)oxy)quinuclidine: A Potential Ligand for the Treatment of Alzheimer’s Disease","authors":"Pablo S. Cavagnero, , , Yaíma Sánchez, , , Brian Fell, , , Oscar Ramírez Molina, , , Javiera Gavilán, , , Efraín A. Polo, , , Jorge Fuentealba, , , Margarita Gutierrez, , , Claudio A. Jiménez*, , and , Jhon J. López*, ","doi":"10.1021/acschemneuro.5c00527","DOIUrl":"10.1021/acschemneuro.5c00527","url":null,"abstract":"<p >Alzheimer’s disease (AD) is a neurodegenerative disorder marked by the accumulation of β-amyloid (Aβ) peptides, which disrupt neuronal homeostasis through their neurotoxic effects. Aβ aggregates interfere with synaptic function by interacting with nicotinic acetylcholine receptors (nAChRs), particularly the α7 subtype, thereby impairing cholinergic signaling, which is crucial for cognition and memory. Pharmacological advancements have identified Positive Allosteric Modulators (PAMs) as promising therapeutic agents to counteract Aβ neurotoxicity. PAMs enhance nAChR activity by binding to allosteric sites, thereby reducing Aβ-induced neurotoxicity without competing with acetylcholine. This study evaluates 3-((6-(phenylethynyl)pyridine-3-yl)oxy)quinuclidine (<b>EQ-04</b>), a novel PAM with high selectivity for the α7 nAChR subtype, demonstrating neuroprotective potential. <i>In vitro</i> analyses using PC-12 cells evaluated the cytotoxic and neuroprotective properties of <b>EQ-04</b>. Cytotoxicity assays confirmed <b>EQ-04</b>’s safety, showing no adverse effects on cell viability across concentrations. <b>EQ-04</b> significantly enhanced cell viability by 37% at 1 nM against Aβ toxicity and inhibited Aβ aggregation. These findings highlight the potential of <b>EQ-04</b> as a neuroprotective agent for Alzheimer’s disease (AD) therapy, warranting further investigation into its pharmacokinetics and <i>in vivo</i> efficacy.</p>","PeriodicalId":13,"journal":{"name":"ACS Chemical Neuroscience","volume":"16 23","pages":"4502–4510"},"PeriodicalIF":3.9,"publicationDate":"2025-11-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://pubs.acs.org/doi/pdf/10.1021/acschemneuro.5c00527","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145501261","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-11-12DOI: 10.1021/acschemneuro.5c00521
Jack K. McDonald*, , , Aakanksha Abrol, , , Chris Lumb, , , Ben Capuano, , , Peter J. Scammells, , , Liam Scott, , , Natalie A. Diepenhorst, , , Christopher J. Langmead, , , Sheng Yu Ang, , and , Gregory D. Stewart*,
Therapies enhancing remyelination offer the exciting prospect of disease-modifying treatments across a number of poorly treated neurological disorders. The class A orphan GPCR, GPR17, is one of the most studied receptors in remyelination; and antagonists of GPR17 have attracted significant attention as potential pro-myelinating medicines. Despite this, the signaling pathways linking GPR17 to remyelination and the molecular mechanisms of action of GPR17 antagonists are not well-defined. In the present study, we characterized GPR17 signaling and inhibition by three chemically distinct GPR17 antagonists: pranlukast, HAMI-3379, and a patent literature antagonist, RWT9996. In HEK293 cells recombinantly expressing GPR17- and BRET-based biosensors, pranlukast preferentially inhibited G protein activation over β-arrestin-2 recruitment, whereas HAMI3379 and RWT9996 equally inhibited all signal transduction tested. Follow-up studies using pharmacological inhibitors and GPR17 antagonists in Oli-neu cells, an immortalized mouse oligodendrocyte precursor cell (OPC) line with endogenous GPR17 expression, corroborated the G protein and β-arrestin coupling profile observed in recombinant cells. Specifically, the generated bias profile suggests that β-arrestin potentiates Gαq signaling from GPR17, conferring differential regulation of Gαq signaling by biased GPR17 antagonists. These findings highlight an unappreciated potential for biased signaling in the pharmacology of GPR17 ligands. We anticipate that these insights will help to inform the translation of GPR17-targeted therapies and improve our understanding of GPR17-mediated signaling pathways in governing myelination.
{"title":"G Protein: β-Arrestin Bias Confers Differential Regulation of Gαq Signaling by GPR17 Antagonists","authors":"Jack K. McDonald*, , , Aakanksha Abrol, , , Chris Lumb, , , Ben Capuano, , , Peter J. Scammells, , , Liam Scott, , , Natalie A. Diepenhorst, , , Christopher J. Langmead, , , Sheng Yu Ang, , and , Gregory D. Stewart*, ","doi":"10.1021/acschemneuro.5c00521","DOIUrl":"10.1021/acschemneuro.5c00521","url":null,"abstract":"<p >Therapies enhancing remyelination offer the exciting prospect of disease-modifying treatments across a number of poorly treated neurological disorders. The class A orphan GPCR, GPR17, is one of the most studied receptors in remyelination; and antagonists of GPR17 have attracted significant attention as potential pro-myelinating medicines. Despite this, the signaling pathways linking GPR17 to remyelination and the molecular mechanisms of action of GPR17 antagonists are not well-defined. In the present study, we characterized GPR17 signaling and inhibition by three chemically distinct GPR17 antagonists: pranlukast, HAMI-3379, and a patent literature antagonist, RWT9996. In HEK293 cells recombinantly expressing GPR17- and BRET-based biosensors, pranlukast preferentially inhibited G protein activation over β-arrestin-2 recruitment, whereas HAMI3379 and RWT9996 equally inhibited all signal transduction tested. Follow-up studies using pharmacological inhibitors and GPR17 antagonists in Oli-neu cells, an immortalized mouse oligodendrocyte precursor cell (OPC) line with endogenous GPR17 expression, corroborated the G protein and β-arrestin coupling profile observed in recombinant cells. Specifically, the generated bias profile suggests that β-arrestin potentiates Gα<sub>q</sub> signaling from GPR17, conferring differential regulation of Gα<sub>q</sub> signaling by biased GPR17 antagonists. These findings highlight an unappreciated potential for biased signaling in the pharmacology of GPR17 ligands. We anticipate that these insights will help to inform the translation of GPR17-targeted therapies and improve our understanding of GPR17-mediated signaling pathways in governing myelination.</p>","PeriodicalId":13,"journal":{"name":"ACS Chemical Neuroscience","volume":"16 23","pages":"4479–4491"},"PeriodicalIF":3.9,"publicationDate":"2025-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145493797","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-11-11DOI: 10.1021/acschemneuro.5c00793
Zahra Mahmoudi Eshkaftaki, , , Saeed Emadi*, , and , Ali Akbar Meratan*,
An increasing body of evidence suggests that mitochondrial dysfunction mediated by α-synuclein (α-syn) aggregates plays a key role in the pathogenesis of Parkinson’s disease (PD), leading to intensive research for the discovery and development of compounds with mitoprotective effects. Silymarin (SIL) is a complex mixture of flavonolignans with a wide range of protective effects on mitochondria under stress conditions. Herein, the potency of SIL, in bulk and nano forms, in protecting mitochondria against oxidative damage induced by α-syn aggregates has been investigated. Mitochondria were isolated from rat brain and liver tissues as well as human neuroblastoma SH-SY5Y cells, and damage was evaluated by using a range of biochemical assays. The obtained results show a substantial difference in the response of various mitochondria to oxidative damage induced by α-syn aggregates, with brain mitochondria exhibiting the highest vulnerability. We found that incubation of mitochondria with either bulk or nano forms of SIL before exposure to α-syn aggregates significantly attenuated oxidative damage in a dose-dependent manner. In parallel, α-syn aggregates aged in the presence of bulk or nano forms of SIL considerably lost their capacity to cause mitochondrial damage. While both bulk and nano forms of SIL showed significant mitoprotective effects, SIL nanosheets were much more effective. Possible mechanisms relating to the mitoprotective effects of SIL and the higher efficacy of SIL nanosheets are discussed. The obtained results suggest natural polyphenol-based nanoparticles as an efficient therapeutic approach in relation to amyloid-related diseases, such as PD.
{"title":"Silymarin-Based Nanosheets Efficiently Protect Mitochondria against Oxidative Damage Mediated by α-Synuclein Amyloid Aggregates","authors":"Zahra Mahmoudi Eshkaftaki, , , Saeed Emadi*, , and , Ali Akbar Meratan*, ","doi":"10.1021/acschemneuro.5c00793","DOIUrl":"10.1021/acschemneuro.5c00793","url":null,"abstract":"<p >An increasing body of evidence suggests that mitochondrial dysfunction mediated by α-synuclein (α-syn) aggregates plays a key role in the pathogenesis of Parkinson’s disease (PD), leading to intensive research for the discovery and development of compounds with mitoprotective effects. Silymarin (SIL) is a complex mixture of flavonolignans with a wide range of protective effects on mitochondria under stress conditions. Herein, the potency of SIL, in bulk and nano forms, in protecting mitochondria against oxidative damage induced by α-syn aggregates has been investigated. Mitochondria were isolated from rat brain and liver tissues as well as human neuroblastoma SH-SY5Y cells, and damage was evaluated by using a range of biochemical assays. The obtained results show a substantial difference in the response of various mitochondria to oxidative damage induced by α-syn aggregates, with brain mitochondria exhibiting the highest vulnerability. We found that incubation of mitochondria with either bulk or nano forms of SIL before exposure to α-syn aggregates significantly attenuated oxidative damage in a dose-dependent manner. In parallel, α-syn aggregates aged in the presence of bulk or nano forms of SIL considerably lost their capacity to cause mitochondrial damage. While both bulk and nano forms of SIL showed significant mitoprotective effects, SIL nanosheets were much more effective. Possible mechanisms relating to the mitoprotective effects of SIL and the higher efficacy of SIL nanosheets are discussed. The obtained results suggest natural polyphenol-based nanoparticles as an efficient therapeutic approach in relation to amyloid-related diseases, such as PD.</p>","PeriodicalId":13,"journal":{"name":"ACS Chemical Neuroscience","volume":"16 23","pages":"4546–4557"},"PeriodicalIF":3.9,"publicationDate":"2025-11-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145493855","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-11-05DOI: 10.1021/acschemneuro.5c00695
Steven A. Barker*,
Psychedelic drugs have begun to show therapeutic promise. However, there is a growing research effort focused on creating nonhallucinogenic analogs of these substances. The goal is to develop new treatments for an expanding list of psychiatric and neurodegenerative disorders, while eliminating the complications and costs of treatment engendered by the subjective psychedelic experience. Structure–activity relationships (SAR), particularly for LSD (d-lysergic acid diethylamide), have guided many of these efforts. This perspective examines the historical development and behavioral testing of several simple analogs of LSD’s D-ring, which, while nonhallucinogenic and nontoxic within the context of their testing to date, can block the behavior-disrupting effects of psychedelics administered to rodents. However, these data are quite mature. D-ring analogs of LSD may have therapeutic potential but require further testing to examine binding, plastogenic effects, and potential utility in psychiatry and neuromedicine, and are ripe for reinvestigation with current tools, approaches, and concepts. Further, the SAR data strongly suggest that the incorporation of several changes to the structural elements of the D-ring may enhance the effects of other LSD-related analogs currently undergoing clinical trials.
{"title":"Simple Analogs of the LSD D-Ring: A Consideration of Structure–Activity Relationships and Their Potential as Therapeutics","authors":"Steven A. Barker*, ","doi":"10.1021/acschemneuro.5c00695","DOIUrl":"10.1021/acschemneuro.5c00695","url":null,"abstract":"<p >Psychedelic drugs have begun to show therapeutic promise. However, there is a growing research effort focused on creating nonhallucinogenic analogs of these substances. The goal is to develop new treatments for an expanding list of psychiatric and neurodegenerative disorders, while eliminating the complications and costs of treatment engendered by the subjective psychedelic experience. Structure–activity relationships (SAR), particularly for LSD (<span>d</span>-lysergic acid diethylamide), have guided many of these efforts. This perspective examines the historical development and behavioral testing of several simple analogs of LSD’s D-ring, which, while nonhallucinogenic and nontoxic within the context of their testing to date, can block the behavior-disrupting effects of psychedelics administered to rodents. However, these data are quite mature. D-ring analogs of LSD may have therapeutic potential but require further testing to examine binding, plastogenic effects, and potential utility in psychiatry and neuromedicine, and are ripe for reinvestigation with current tools, approaches, and concepts. Further, the SAR data strongly suggest that the incorporation of several changes to the structural elements of the D-ring may enhance the effects of other LSD-related analogs currently undergoing clinical trials.</p>","PeriodicalId":13,"journal":{"name":"ACS Chemical Neuroscience","volume":"16 22","pages":"4309–4314"},"PeriodicalIF":3.9,"publicationDate":"2025-11-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://pubs.acs.org/doi/pdf/10.1021/acschemneuro.5c00695","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145443430","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Alzheimer’s disease (AD) is a progressive neurodegenerative disorder in which amyloid-β (Aβ) aggregation plays a pivotal role in its onset and progression. Inhibiting Aβ aggregation is a promising therapeutic strategy; however, its intrinsically disordered and conformationally flexible nature hinders both conventional and computational inhibitor design. Moreover, experimental development of Aβ inhibitors, encompassing molecular design, synthesis, and biological evaluation through repeated assays, is a slow, labor-intensive, and resource-intensive process. Therefore, robust design guidelines and predictive tools are essential for accelerating the discovery of Aβ inhibitors. To overcome these limitations, we developed a machine-learning-based, user-friendly web platform, Amylo-IC50Pred (https://amyloic50pred.vercel.app/), for rapid virtual screening of small molecules targeting Aβ aggregation. The platform integrates two classification models and one regression model, trained on 584 biologically validated compounds. For inhibitor–decoy discrimination, the Random Forest algorithm achieved perfect accuracy (100%). Potency classification into potent, moderately potent, and poor inhibitors was best achieved using Histogram-based Gradient Boosting (81% accuracy). The IC50 regression model, also based on Random Forest, achieved a coefficient of determination (R2) of 0.93, demonstrating strong predictive performance. 2D and 3D key molecular properties such as hydrophobicity, shape and charge distribution, and molecular symmetry were identified as critical contributors to model performance. Importantly, these identified properties provide valuable insights into the molecular features that govern Aβ aggregation inhibition and can serve as a foundation for rational design of potent and selective Aβ aggregation inhibitors. Amylo-IC50Pred thus represents a valuable resource for accelerating AD drug discovery.
阿尔茨海默病(AD)是一种进行性神经退行性疾病,淀粉样蛋白-β (a β)聚集在其发病和发展中起关键作用。抑制a β聚集是一种很有前景的治疗策略;然而,其内在的无序性和构象柔性阻碍了传统和计算抑制剂的设计。此外,a β抑制剂的实验开发,包括分子设计、合成和通过重复测定的生物学评价,是一个缓慢、劳动密集型和资源密集型的过程。因此,稳健的设计指南和预测工具对于加速发现Aβ抑制剂至关重要。为了克服这些限制,我们开发了一个基于机器学习的、用户友好的网络平台,Amylo-IC50Pred (https://amyloic50pred.vercel)。app/),用于靶向Aβ聚集的小分子的快速虚拟筛选。该平台集成了两个分类模型和一个回归模型,对584种经过生物学验证的化合物进行了训练。对于抑制-诱饵区分,随机森林算法达到了完美的准确率(100%)。使用基于直方图的梯度增强(81%的准确率),可以最好地将效力分类为强效、中等强效和弱效抑制剂。同样基于随机森林的IC50回归模型的决定系数(R2)为0.93,具有较强的预测性能。2D和3D关键分子性质,如疏水性、形状和电荷分布以及分子对称性,被认为是模型性能的关键因素。重要的是,这些鉴定的性质为控制a β聚集抑制的分子特征提供了有价值的见解,并可以作为合理设计有效和选择性a β聚集抑制剂的基础。因此,Amylo-IC50Pred代表了加速阿尔茨海默病药物发现的宝贵资源。
{"title":"Machine Learning–Based Bioactivity Prediction and Descriptor-Guided Rational Design of Amyloid-β Aggregation Inhibitors","authors":"Avantika Bansal, , , Akshat Raj Sharma, , , Arya Chakraborty, , , Aditya Sunkaria, , and , Alok Jain*, ","doi":"10.1021/acschemneuro.5c00649","DOIUrl":"10.1021/acschemneuro.5c00649","url":null,"abstract":"<p >Alzheimer’s disease (AD) is a progressive neurodegenerative disorder in which amyloid-β (Aβ) aggregation plays a pivotal role in its onset and progression. Inhibiting Aβ aggregation is a promising therapeutic strategy; however, its intrinsically disordered and conformationally flexible nature hinders both conventional and computational inhibitor design. Moreover, experimental development of Aβ inhibitors, encompassing molecular design, synthesis, and biological evaluation through repeated assays, is a slow, labor-intensive, and resource-intensive process. Therefore, robust design guidelines and predictive tools are essential for accelerating the discovery of Aβ inhibitors. To overcome these limitations, we developed a machine-learning-based, user-friendly web platform, <b>Amylo-IC</b><sub><b>50</b></sub><b>Pred</b> (https://amyloic50pred.vercel.app/), for rapid virtual screening of small molecules targeting Aβ aggregation. The platform integrates two classification models and one regression model, trained on 584 biologically validated compounds. For inhibitor–decoy discrimination, the Random Forest algorithm achieved perfect accuracy (100%). Potency classification into potent, moderately potent, and poor inhibitors was best achieved using Histogram-based Gradient Boosting (81% accuracy). The IC<sub>50</sub> regression model, also based on Random Forest, achieved a coefficient of determination (<i>R</i><sup>2</sup>) of 0.93, demonstrating strong predictive performance. 2D and 3D key molecular properties such as hydrophobicity, shape and charge distribution, and molecular symmetry were identified as critical contributors to model performance. Importantly, these identified properties provide valuable insights into the molecular features that govern Aβ aggregation inhibition and can serve as a foundation for rational design of potent and selective Aβ aggregation inhibitors. Amylo-IC<sub>50</sub>Pred thus represents a valuable resource for accelerating AD drug discovery.</p>","PeriodicalId":13,"journal":{"name":"ACS Chemical Neuroscience","volume":"16 22","pages":"4351–4363"},"PeriodicalIF":3.9,"publicationDate":"2025-11-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145450300","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Alzheimer’s disease (AD) is the most prevalent neurodegenerative disease characterized by memory loss and other cognitive functions. The key hallmarks of AD include extracellular beta-amyloid clumps and intracellular neurofibrillary tau tangles in the neurons. Cholinesterase inhibitors and NMDA-receptor antagonists and their combination are already approved treatments; however, these only give short-term symptom relief. Therefore, new therapeutic techniques and novel drugs are required to combat the century-old AD. This study includes the screening of nine novel small compounds (spiro-indenoquinoxaline-pyrrolidines) via in silico approaches; these compounds have been scrutinized to explore their potential as antiamyloidogenic drugs. Computational tools, including ADMET analysis, molecular docking, and molecular dynamics (MD) simulations, have been used for screening the selected compounds against monomeric peptides of Aβ (Aβ1–40 and Aβ1–42) and their oligomeric counterparts, i.e., 6Aβ9–40 and 6Aβ1–42. Among the nine molecules screened for this study, ADPR-d reflected the best drug-likeness and negligible toxicity. Further, ADPR-d has the highest binding affinity for all the peptides selected for this study. Additionally, MD simulations of Aβ peptide–ADPR-d complexes confirmed a stable complex formation. In vitro aggregation assay and cell culture studies for Aβ1–42 also support our in silico findings. The positive findings of the presented study highlight that the ADPR-d molecule may prove to be a potential therapeutic molecule against AD. However, these results would require further in vitro and in vivo analysis before proceeding to clinical settings with these compounds against AD.
{"title":"Identifying Novel Spiro-Indenoquinoxaline-Pyrrolidine-Based Amyloid Beta Inhibitors in Alzheimer’s Disease from In Silico to In Vitro","authors":"Shital Rani, , , Mandeep Kaur, , , Pritiman Pothal, , , Kshitij Rajput, , , Alisha Khera, , , Akanksha Sharma, , , Varsha Thombare, , , Ashish Sethi, , , Bishwajit Paul, , , Janeka Gartia, , , Vinod Kumar Yadav, , , Nitin Aniruddha Patil, , , Pavitra Ranawat, , , Adukamparai Rajukrishnan Suresh Babu*, , , Gurpal Singh*, , and , Ravi Pratap Barnwal*, ","doi":"10.1021/acschemneuro.5c00728","DOIUrl":"10.1021/acschemneuro.5c00728","url":null,"abstract":"<p >Alzheimer’s disease (AD) is the most prevalent neurodegenerative disease characterized by memory loss and other cognitive functions. The key hallmarks of AD include extracellular beta-amyloid clumps and intracellular neurofibrillary tau tangles in the neurons. Cholinesterase inhibitors and NMDA-receptor antagonists and their combination are already approved treatments; however, these only give short-term symptom relief. Therefore, new therapeutic techniques and novel drugs are required to combat the century-old AD. This study includes the screening of nine novel small compounds (spiro-indenoquinoxaline-pyrrolidines) via <i>in silico</i> approaches; these compounds have been scrutinized to explore their potential as antiamyloidogenic drugs. Computational tools, including ADMET analysis, molecular docking, and molecular dynamics (MD) simulations, have been used for screening the selected compounds against monomeric peptides of Aβ (Aβ<sub>1–40</sub> and Aβ<sub>1–42</sub>) and their oligomeric counterparts, i.e., 6Aβ<sub>9–40</sub> and 6Aβ<sub>1–42</sub>. Among the nine molecules screened for this study, ADPR-d reflected the best drug-likeness and negligible toxicity. Further, ADPR-d has the highest binding affinity for all the peptides selected for this study. Additionally, MD simulations of Aβ peptide–ADPR-d complexes confirmed a stable complex formation. <i>In vitro</i> aggregation assay and cell culture studies for Aβ<sub>1–42</sub> also support our <i>in silico</i> findings. The positive findings of the presented study highlight that the ADPR-d molecule may prove to be a potential therapeutic molecule against AD. However, these results would require further <i>in vitro</i> and <i>in vivo</i> analysis before proceeding to clinical settings with these compounds against AD.</p>","PeriodicalId":13,"journal":{"name":"ACS Chemical Neuroscience","volume":"16 22","pages":"4400–4416"},"PeriodicalIF":3.9,"publicationDate":"2025-11-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145436597","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}