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Machine Learning to Predict Interim Response in Pediatric Classical Hodgkin Lymphoma Using Affordable Blood Tests. 使用经济实惠的血液化验工具通过机器学习预测小儿典型霍奇金淋巴瘤的中期反应
IF 3.2 Q2 ONCOLOGY Pub Date : 2024-10-01 Epub Date: 2024-10-24 DOI: 10.1200/GO.23.00435
Jennifer A Geel, Artsiom Hramyka, Jan du Plessis, Yasmin Goga, Anel Van Zyl, Marc G Hendricks, Thanushree Naidoo, Rema Mathew, Lizette Louw, Amy Carr, Beverley Neethling, Tanya M Schickerling, Fareed Omar, Liezl Du Plessis, Elelwani Madzhia, Vhutshilo Netshituni, Katherine Eyal, Thandeka V Z Ngcana, Tom Kelsey, Daynia E Ballott, Monika L Metzger

Purpose: Response assessment of classical Hodgkin lymphoma (cHL) with positron emission tomography-computerized tomography (PET-CT) is standard of care in well-resourced settings but unavailable in most African countries. We aimed to investigate correlations between changes in PET-CT findings at interim analysis with changes in blood test results in pediatric patients with cHL in 17 South African centers.

Methods: Changes in ferritin, lactate dehydrogenase (LDH), erythrocyte sedimentation rate (ESR), albumin, total white cell count (TWC), absolute lymphocyte count (ALC), and absolute eosinophil count were compared with PET-CT Deauville scores (DS) after two cycles of doxorubicin, bleomycin, vinblastine, and dacarbazine in 84 pediatric patients with cHL. DS 1-3 denoted rapid early response (RER) while DS 4-5 denoted slow early response (SER). Missing values were imputed using the k-nearest neighbor algorithm. Baseline and follow-up blood test values were combined into a single difference variable. Data were split into training and testing sets for analysis using Python scikit-learn 1.2.2 with logistic regression, random forests, naïve Bayes, and support vector machine classifiers.

Results: Random forest analysis achieved the best validated test accuracy of 73% when predicting RER or SER from blood samples. When applied to the full data set, the optimal model had a predictive accuracy of 80% and a receiver operating characteristic AUC of 89%. The most predictive variable was the differences in ALC, contributing 21% to the model. Differences in ferritin, LDH, and TWC contributed 15%-16%. Differences in ESR, hemoglobin, and albumin contributed 11%-12%.

Conclusion: Changes in low-cost, widely available blood tests may predict chemosensitivity for pediatric cHL without access to PET-CT, identifying patients who may not require radiotherapy. Changes in these nonspecific blood tests should be assessed in combination with clinical findings and available imaging to avoid undertreatment.

目的:利用正电子发射计算机断层扫描(PET-CT)对典型霍奇金淋巴瘤(cHL)进行反应评估是资源丰富地区的标准治疗方法,但在大多数非洲国家却无法实现。我们旨在研究南非 17 个中心的 cHL 儿童患者在中期分析时 PET-CT 结果的变化与血液检测结果变化之间的相关性:方法:在对 84 名儿童 cHL 患者进行两个周期的多柔比星、博来霉素、长春新碱和达卡巴嗪治疗后,将铁蛋白、乳酸脱氢酶 (LDH)、红细胞沉降率 (ESR)、白蛋白、白细胞总数 (TWC)、淋巴细胞绝对计数 (ALC) 和嗜酸性粒细胞绝对计数的变化与 PET-CT 多维尔评分 (DS) 进行比较。DS 1-3 表示快速早期反应(RER),DS 4-5 表示缓慢早期反应(SER)。缺失值采用 k 最近邻算法进行归类。基线和随访血液测试值合并为一个差值变量。数据被分成训练集和测试集,使用 Python scikit-learn 1.2.2 和逻辑回归、随机森林、奈夫贝叶斯和支持向量机分类器进行分析:在预测血液样本中的 RER 或 SER 时,随机森林分析取得了 73% 的最佳验证测试准确率。当应用于完整数据集时,最佳模型的预测准确率为 80%,接受者操作特征 AUC 为 89%。最具预测性的变量是 ALC 的差异,对模型的贡献率为 21%。铁蛋白、LDH 和 TWC 的差异占 15%-16%。血沉、血红蛋白和白蛋白的差异占 11%-12%:结论:低成本、可广泛使用的血液检测项目的变化可预测未接受 PET-CT 治疗的小儿 cHL 的化疗敏感性,从而识别出可能不需要放疗的患者。这些非特异性血液检测指标的变化应结合临床结果和现有影像学资料进行评估,以避免治疗不当。
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引用次数: 0
Barriers to Follow-Up of an Abnormal Clinical Breast Examination in Uttar Pradesh, India: A Qualitative Study. 印度北方邦临床乳房异常检查随访障碍:定性研究。
IF 3.2 Q2 ONCOLOGY Pub Date : 2024-10-01 Epub Date: 2024-10-10 DOI: 10.1200/GO.24.00001
Erica Liebermann, Vaibhav Patwardhan, Gulnoza Usmanova, Nadeem Aktar, Shivani Agrawal, Parag Bhamare, Maura McCarthy, Ophira Ginsburg, Somesh Kumar

Purpose: To understand key barriers to diagnostic follow-up for women with an abnormal clinical breast examination (CBE) at the primary care level in the Uttar Pradesh state in India. We also explored acceptability of mobile phones to address barriers to CBE follow-up for women.

Materials and methods: We conducted 28 semistructured in-depth interviews with 12 women with an abnormal CBE at the primary health facility who did not have diagnostic follow-up, four community health workers, nine health care providers from health facilities in rural and urban settings, and three state-level decision makers. Interviews were audiorecorded, transcribed verbatim, and translated from Hindi to English. Thematic analysis was conducted using Dedoose qualitative software. Themes were organized by multilevel barriers to follow-up.

Results: Key barriers to CBE follow-up included knowledge, fear, and stigma about breast cancer; women's health not being prioritized in the family; discomfort seeing male providers; and difficulty navigating the diagnostic facility. Despite community education and outreach efforts by community health workers (known as Accredited Social Health Activists), lack of awareness of breast cancer and the importance of follow-up for abnormal CBE remains a barrier to early detection. Despite widespread access to mobile phones, perceived acceptability varied among stakeholders regarding mobile phone use for breast health education and communication with clients.

Conclusion: Knowledge, cultural, and health system barriers challenge women's ability to follow recommendations for diagnostic follow-up of an abnormal CBE. Multilevel and gender-responsive strategies are needed to address these barriers. Our results suggest that mobile phones could be used to further improve breast health awareness, patient navigation, and tracking, and further research is needed.

目的:了解印度北方邦基层医疗机构对临床乳房检查(CBE)异常妇女进行诊断随访的主要障碍。我们还探讨了用手机解决妇女 CBE 随访障碍的可接受性:我们进行了 28 次半结构式深度访谈,访谈对象包括 12 名在基层医疗机构发现 CBE 异常但未进行诊断随访的妇女、4 名社区卫生工作者、9 名来自农村和城市医疗机构的医疗服务提供者以及 3 名邦级决策者。对访谈进行了录音、逐字记录并从印地语翻译成英语。使用 Dedoose 定性软件进行了主题分析。结果:结果:CBE 随访的主要障碍包括对乳腺癌的了解、恐惧和污名化;女性健康在家庭中未被优先考虑;看男医生不舒服;以及在诊断设施中的导航困难。尽管社区卫生工作者(被称为 "经认可的社会健康活动家")开展了社区教育和外联工作,但人们对乳腺癌以及异常 CBE 随访的重要性缺乏认识,这仍然是早期发现的一个障碍。尽管移动电话已广泛普及,但各利益相关方对使用移动电话进行乳腺健康教育和与客户沟通的接受程度不尽相同:结论:知识、文化和医疗系统方面的障碍对妇女遵循CBE异常诊断跟踪建议的能力构成了挑战。要消除这些障碍,需要采取多层次和促进性别平等的策略。我们的研究结果表明,手机可用于进一步提高乳腺健康意识、患者导航和跟踪,还需要进一步的研究。
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引用次数: 0
Barriers to Implementing a Quality Improvement Program in Low- and Middle-Income Countries: Adequacy of Resources. 中低收入国家实施质量改进计划的障碍:资源的充足性。
IF 3.2 Q2 ONCOLOGY Pub Date : 2024-10-01 Epub Date: 2024-10-24 DOI: 10.1200/GO.24.00114
Debanjan Pain, Emily MacDuffie, Yehoda M Martei, Megan Kassick, Daniel J Ikeda, Lawrence N Shulman, Lina Loaiza Salazar, Dayssy Diaz Pardo, Shona Nag, Surbhi Grover

Low- and middle-income countries (LMICs) report disproportionally worse cancer mortality. Current global cancer control efforts focus predominantly on expanding access to multimodality treatment for patients, whereas less attention has been spent on implementing strategies to ensure sustained quality assessment and improvement across the cancer care continuum. The goal of this focused review was to examine specific resource barriers to the development and implementation of quality improvement programs in LMICs. In this article, we use a nonsystematic review process to discuss the existing literature on four resource barriers within the context of cancer care delivery in LMICs, focusing on staff, time allocated for quality improvement work, research infrastructure, and funding. We provide possible solutions to address these barriers and share examples of specific quality improvement initiatives implemented across different world regions. Possible solutions to address these resource barriers include investment in human resources by increasing recruitment and training of the workforce, engagement of medical trainees and patients in quality improvement work, establishment of cancer registries and electronic medical records, and prioritization by large international funding agencies to invest in quality improvement research in LMICs. This review highlights four prevalent resources barriers to quality improvement in LMICs. Using examples from Botswana, Colombia, India, and Rwanda, we demonstrate solutions that may help overcome these barriers.

中低收入国家(LMICs)的癌症死亡率高得不成比例。目前全球癌症控制工作的重点主要集中在扩大患者获得多模式治疗的机会上,而较少关注如何实施战略以确保在整个癌症治疗过程中持续进行质量评估和改进。本次重点综述的目的是研究在低收入和中等收入国家制定和实施质量改进计划的具体资源障碍。在本文中,我们采用了非系统性综述的方法,讨论了在低收入国家癌症医疗服务中存在的四种资源障碍的现有文献,重点关注人员、分配给质量改进工作的时间、研究基础设施和资金。我们提供了解决这些障碍的可行方案,并分享了世界不同地区实施的具体质量改进措施的实例。解决这些资源障碍的可行方案包括:通过增加人员招聘和培训进行人力资源投资;让医学学员和患者参与质量改进工作;建立癌症登记册和电子病历;大型国际资助机构优先投资于低收入和中等收入国家的质量改进研究。本综述重点介绍了阻碍低收入与中等收入国家质量改进的四种普遍存在的资源障碍。通过博茨瓦纳、哥伦比亚、印度和卢旺达的实例,我们展示了有助于克服这些障碍的解决方案。
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引用次数: 0
Fifteen Years of Non-Hodgkin Lymphoma in an Indonesian National Referral Hospital: Epidemiologic Trends and Diagnostic Challenges. 印度尼西亚一家国家转诊医院的非霍奇金淋巴瘤十五年:流行病学趋势与诊断挑战》。
IF 3.2 Q2 ONCOLOGY Pub Date : 2024-10-01 Epub Date: 2024-11-07 DOI: 10.1200/GO-24-00346
Agnes Stephanie Harahap, Maria Francisca Ham, Andree Kurniawan, Stefanny Charles, Felix Wijovi, Lugyanti Sukrisman

Purpose: The global burden of lymphoma is substantial because of the increase in its incidence in recent decades. However, disease characteristics vary across different geographical locations. Numerous immunohistochemistry markers and molecular studies are essential to determine lymphoma diagnosis and prognosis. This poses significant challenges in developing countries with limited health care resources. This large-scale study assesses the frequency of non-Hodgkin lymphoma (NHL) in Indonesia over the past 15 years, analyses its clinicopathologic features, and predicts future trends.

Methods: This retrospective study collected lymphoma patients diagnosed at the Department of Anatomical Pathology Dr. Cipto Mangunkusumo National Central General Hospital, Indonesia, from 2009 until 2023. All lymphoma diagnoses were confirmed by using ancillary tools classified as an enhanced lymphoma panel according to a resource-stratified guideline. We analyzed the clinicopathologic features of each NHL type and further applied the Autoregressive Integrated Moving Average model to predict future incidence trends.

Results: The study consisted of 7,368 NHL patients. Among these, B-cell lymphomas accounted for 90.6%, with diffuse large B-cell lymphoma being the most prevalent subtype (68.8%), followed by follicular lymphoma (8.8%) and marginal zone lymphoma (5.8%). Extranodal natural killer/T-cell lymphoma, nasal type, is the most common T-cell lymphoma found (26.3%). All types of lymphoma were found to be more common in males (57.7%). Extranodal involvement, particularly in the tonsil and upper respiratory tract, was frequently observed. Projection analysis indicates a steady increase in lymphoma patients in the future.

Conclusion: This study highlights the distribution and burden of NHL in Indonesia over 15 years. The overall epidemiologic pattern of NHL in this study aligns with the results observed in other Asian countries. The rising incidence of lymphoma requires improved health care infrastructure and prevention strategies.

目的:由于近几十年来淋巴瘤发病率的上升,淋巴瘤给全球带来了沉重的负担。然而,不同地理位置的疾病特征各不相同。大量免疫组化标记物和分子研究对确定淋巴瘤诊断和预后至关重要。这给医疗资源有限的发展中国家带来了巨大挑战。这项大规模研究评估了过去15年印尼非霍奇金淋巴瘤(NHL)的发病率,分析了其临床病理特征,并预测了未来趋势:这项回顾性研究收集了2009年至2023年期间在印度尼西亚Cipto Mangunkusumo博士国立中央综合医院解剖病理学部确诊的淋巴瘤患者。所有淋巴瘤诊断均通过使用根据资源分级指南分类为增强型淋巴瘤面板的辅助工具进行确诊。我们分析了每种NHL类型的临床病理特征,并进一步应用自回归整合移动平均模型预测未来的发病趋势:研究包括7368名NHL患者。其中,B细胞淋巴瘤占90.6%,弥漫大B细胞淋巴瘤是最常见的亚型(68.8%),其次是滤泡淋巴瘤(8.8%)和边缘区淋巴瘤(5.8%)。鼻型结节外自然杀伤/T细胞淋巴瘤是最常见的T细胞淋巴瘤(26.3%)。所有类型的淋巴瘤均以男性多见(57.7%)。结节外受累,尤其是扁桃体和上呼吸道受累的情况很常见。预测分析表明,未来淋巴瘤患者将稳步增加:本研究强调了15年来NHL在印尼的分布和负担情况。本研究中 NHL 的总体流行病学模式与在其他亚洲国家观察到的结果一致。随着淋巴瘤发病率的上升,需要改善医疗基础设施和制定预防策略。
{"title":"Fifteen Years of Non-Hodgkin Lymphoma in an Indonesian National Referral Hospital: Epidemiologic Trends and Diagnostic Challenges.","authors":"Agnes Stephanie Harahap, Maria Francisca Ham, Andree Kurniawan, Stefanny Charles, Felix Wijovi, Lugyanti Sukrisman","doi":"10.1200/GO-24-00346","DOIUrl":"10.1200/GO-24-00346","url":null,"abstract":"<p><strong>Purpose: </strong>The global burden of lymphoma is substantial because of the increase in its incidence in recent decades. However, disease characteristics vary across different geographical locations. Numerous immunohistochemistry markers and molecular studies are essential to determine lymphoma diagnosis and prognosis. This poses significant challenges in developing countries with limited health care resources. This large-scale study assesses the frequency of non-Hodgkin lymphoma (NHL) in Indonesia over the past 15 years, analyses its clinicopathologic features, and predicts future trends.</p><p><strong>Methods: </strong>This retrospective study collected lymphoma patients diagnosed at the Department of Anatomical Pathology Dr. Cipto Mangunkusumo National Central General Hospital, Indonesia, from 2009 until 2023. All lymphoma diagnoses were confirmed by using ancillary tools classified as an enhanced lymphoma panel according to a resource-stratified guideline. We analyzed the clinicopathologic features of each NHL type and further applied the Autoregressive Integrated Moving Average model to predict future incidence trends.</p><p><strong>Results: </strong>The study consisted of 7,368 NHL patients. Among these, B-cell lymphomas accounted for 90.6%, with diffuse large B-cell lymphoma being the most prevalent subtype (68.8%), followed by follicular lymphoma (8.8%) and marginal zone lymphoma (5.8%). Extranodal natural killer/T-cell lymphoma, nasal type, is the most common T-cell lymphoma found (26.3%). All types of lymphoma were found to be more common in males (57.7%). Extranodal involvement, particularly in the tonsil and upper respiratory tract, was frequently observed. Projection analysis indicates a steady increase in lymphoma patients in the future.</p><p><strong>Conclusion: </strong>This study highlights the distribution and burden of NHL in Indonesia over 15 years. The overall epidemiologic pattern of NHL in this study aligns with the results observed in other Asian countries. The rising incidence of lymphoma requires improved health care infrastructure and prevention strategies.</p>","PeriodicalId":14806,"journal":{"name":"JCO Global Oncology","volume":"10 ","pages":"e2400346"},"PeriodicalIF":3.2,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11583351/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142604585","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Intersectionality Between Country, Gender and Funding in Authorship for Phase III Trials Presented at the ASCO Annual Meeting 2022. 在 2022 年 ASCO 年会上发表的《III 期试验作者身份中的国家、性别和资金交叉性》。
IF 3.2 Q2 ONCOLOGY Pub Date : 2024-10-01 Epub Date: 2024-10-03 DOI: 10.1200/GO.24.00238
Laure-Anne Teuwen, Joanna Young, Saleh Alessy, Berna C Özdemir, Diah Martina, Sharif Folorunso, Maria T Bourlon, Hans Prenen, Eva Segelov

Purpose: Multiple disparities have been recognized in the area of location, gender, and funding for leadership in oncology clinical trials. Understanding their intersectionality is crucial to be able to formulate policies and actions, to ensure research is representative of the global oncology community. Here, data from phase III trials presented at the ASCO Annual Meeting of 2022 (ASCO22) were analyzed.

Methods: The location of institution, gender of lead and senior authors, and funding source for solid tumor phase III trial abstracts presented at the ASCO22 were analyzed. World Bank analytical grouping version 2021-2022 was used to describe regions and countries as high (HIC), upper-middle (UMIC), lower-middle (LoMIC), and low-income (LIC).

Results: Across 239 phase III abstracts, lead and senior authors respectively represented HIC institutions in 83% and 85%, UMIC in 13% and 12%, and LoMIC in 4% and 3%. No authors worked in LICs or sub-Saharan Africa. Women accounted for 29% of lead and 23% of senior authors. This distribution persisted across regions, with women as lead authors ranging from 19% (UMIC) to 31% (HIC), and as senior authors from 7% (UMIC) to 25% (HIC). Industry funded 62% of trials, academia 17%, and others 15%; 6% lacked funding. Industry funding was highest in HIC trials (66% for lead and senior authors), followed by UMICs (55% lead, 53% senior) and LoMICs (11% lead, 0% senior). Industry-sponsored trials were proportionally equally represented among female and male senior authors (63% each).

Conclusion: There is marked intersectionality in leadership of oncology clinical trials presented at the world's largest oncology conference.

目的:人们已经认识到,在肿瘤学临床试验的地点、性别和领导资金方面存在多种差异。了解这些差异的交叉性对于制定政策和行动、确保研究能够代表全球肿瘤学界至关重要。本文分析了在 2022 年 ASCO 年会(ASCO22)上展示的 III 期试验数据:方法:分析了在 ASCO22 上发表的实体瘤 III 期试验摘要的机构所在地、主要作者和资深作者的性别以及资金来源。世界银行 2021-2022 年版分析分组将地区和国家分为高收入国家(HIC)、中上游国家(UMIC)、中下游国家(LoMIC)和低收入国家(LIC):结果:在 239 篇 III 期论文摘要中,主要作者和资深作者分别有 83% 和 85% 来自高收入国家,13% 和 12% 来自中上收入国家,4% 和 3% 来自低收入国家。没有作者在低收入国家或撒哈拉以南非洲工作。女性占主要作者的 29%,占资深作者的 23%。这种分布在不同地区持续存在,女性作为主要作者的比例从19%(UMIC)到31%(HIC)不等,女性作为资深作者的比例从7%(UMIC)到25%(HIC)不等。工业界资助了62%的试验,学术界资助了17%,其他资助了15%;6%的试验缺乏资助。产业资助比例最高的是HIC试验(66%为第一作者和资深作者),其次是UMIC试验(55%为第一作者,53%为资深作者)和LoMIC试验(11%为第一作者,0%为资深作者)。行业赞助的试验在女性和男性资深作者中的比例相当(各占 63%):结论:在全球最大的肿瘤学会议上发表的肿瘤临床试验的领导者存在明显的交叉性。
{"title":"Intersectionality Between Country, Gender and Funding in Authorship for Phase III Trials Presented at the ASCO Annual Meeting 2022.","authors":"Laure-Anne Teuwen, Joanna Young, Saleh Alessy, Berna C Özdemir, Diah Martina, Sharif Folorunso, Maria T Bourlon, Hans Prenen, Eva Segelov","doi":"10.1200/GO.24.00238","DOIUrl":"10.1200/GO.24.00238","url":null,"abstract":"<p><strong>Purpose: </strong>Multiple disparities have been recognized in the area of location, gender, and funding for leadership in oncology clinical trials. Understanding their intersectionality is crucial to be able to formulate policies and actions, to ensure research is representative of the global oncology community. Here, data from phase III trials presented at the ASCO Annual Meeting of 2022 (ASCO22) were analyzed.</p><p><strong>Methods: </strong>The location of institution, gender of lead and senior authors, and funding source for solid tumor phase III trial abstracts presented at the ASCO22 were analyzed. World Bank analytical grouping version 2021-2022 was used to describe regions and countries as high (HIC), upper-middle (UMIC), lower-middle (LoMIC), and low-income (LIC).</p><p><strong>Results: </strong>Across 239 phase III abstracts, lead and senior authors respectively represented HIC institutions in 83% and 85%, UMIC in 13% and 12%, and LoMIC in 4% and 3%. No authors worked in LICs or sub-Saharan Africa. Women accounted for 29% of lead and 23% of senior authors. This distribution persisted across regions, with women as lead authors ranging from 19% (UMIC) to 31% (HIC), and as senior authors from 7% (UMIC) to 25% (HIC). Industry funded 62% of trials, academia 17%, and others 15%; 6% lacked funding. Industry funding was highest in HIC trials (66% for lead and senior authors), followed by UMICs (55% lead, 53% senior) and LoMICs (11% lead, 0% senior). Industry-sponsored trials were proportionally equally represented among female and male senior authors (63% each).</p><p><strong>Conclusion: </strong>There is marked intersectionality in leadership of oncology clinical trials presented at the world's largest oncology conference.</p>","PeriodicalId":14806,"journal":{"name":"JCO Global Oncology","volume":"10 ","pages":"e2400238"},"PeriodicalIF":3.2,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142371927","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genetic Signatures: CD44 Single-Nucleotide Polymorphisms Affect Cell Surface Expression and Elevate Risk in Head and Neck Squamous Cell Carcinoma. 遗传特征:CD44 单核苷酸多态性影响细胞表面表达并增加头颈部鳞状细胞癌的风险。
IF 3.2 Q2 ONCOLOGY Pub Date : 2024-10-01 Epub Date: 2024-10-31 DOI: 10.1200/GO.24.00084
Muhammad Kashif, Shah Jahan, Sadia Minhas, Ali Amar, Romeeza Tahir, Haseeb Nisar, Faheem Shehzad, Abdul Hanan Nagi, Nadeem Afzal

Purpose: This study aimed to investigate the impact of single-nucleotide polymorphisms (SNPs) in the CD44 gene, specifically in the 3'UTR region (rs13347) and intronic region (rs187115), on the cell surface expression of CD44 protein and the risk of development of head and neck squamous cell carcinoma (HNSCC).

Materials and methods: The study involved analysis of 85 samples and 85 healthy controls. Immunohistochemistry (IHC) and flow cytometry were used to assess cell surface protein expression using CD44 antibody. DNA from formalin-fixed paraffin-embedded tissue sections was isolated and amplified using targeted primers. Sanger sequencing of the resultant amplified products was performed to determine the genotypes of the CD44 rs13347 and rs187115 SNPs. GTEx and RegulomeDB were queried to evaluate the genotypic effects of these variants on target gene expression and regulation.

Results: A comparison between patients with HNSCC and healthy controls revealed a significant association between CD44 rs13347 and an increased risk of HNSCC in all the analyzed models, especially the TT genotype showed a significantly higher risk with an odds ratio of 8.69 (95% CI, 2.35 to 32.09; P = .0003). However, no significant association was found between CD44 rs187115 and HNSCC in any of the models analyzed (all P > .05). Other notable findings included significant associations between CD44 rs13347 genotype and age (P = .031), number of CD44-positive tumor cells (P = .049), CD44 staining intensity (SI; P = .039), and CD44 immunoreactivity score (IRS) status (P = .019).

Conclusion: The T allele and homozygous TT genotype of CD44 rs13347 SNP were associated with increased susceptibility to HNSCC and decreased proportion of CD44-positive tumor cells, low SI, and reduced IRS.

目的:本研究旨在探讨CD44基因中的单核苷酸多态性(SNPs),尤其是3'UTR区(rs13347)和内含子区(rs187115)的单核苷酸多态性对CD44蛋白的细胞表面表达以及头颈部鳞状细胞癌(HNSCC)发病风险的影响:研究分析了 85 个样本和 85 个健康对照组。采用免疫组织化学(IHC)和流式细胞术,使用 CD44 抗体评估细胞表面蛋白的表达。从福尔马林固定石蜡包埋的组织切片中分离DNA,并使用目标引物进行扩增。对扩增产物进行 Sanger 测序,以确定 CD44 rs13347 和 rs187115 SNPs 的基因型。对 GTEx 和 RegulomeDB 进行了查询,以评估这些变异对靶基因表达和调控的基因型影响:在所有分析模型中,HNSCC 患者与健康对照组的比较显示 CD44 rs13347 与 HNSCC 风险增加有显著关联,尤其是 TT 基因型的风险显著增加,几率比为 8.69 (95% CI, 2.35 to 32.09; P = .0003)。然而,在所有分析模型中,CD44 rs187115 与 HNSCC 之间均未发现明显关联(所有 P > .05)。其他值得注意的发现包括 CD44 rs13347 基因型与年龄(P = .031)、CD44 阳性肿瘤细胞数量(P = .049)、CD44 染色强度(SI;P = .039)和 CD44 免疫反应性评分(IRS)状态(P = .019)之间的显着关联:结论:CD44 rs13347 SNP 的 T 等位基因和同源 TT 基因型与 HNSCC 易感性增加、CD44 阳性肿瘤细胞比例降低、SI 低和 IRS 降低有关。
{"title":"Genetic Signatures: <i>CD44</i> Single-Nucleotide Polymorphisms Affect Cell Surface Expression and Elevate Risk in Head and Neck Squamous Cell Carcinoma.","authors":"Muhammad Kashif, Shah Jahan, Sadia Minhas, Ali Amar, Romeeza Tahir, Haseeb Nisar, Faheem Shehzad, Abdul Hanan Nagi, Nadeem Afzal","doi":"10.1200/GO.24.00084","DOIUrl":"10.1200/GO.24.00084","url":null,"abstract":"<p><strong>Purpose: </strong>This study aimed to investigate the impact of single-nucleotide polymorphisms (SNPs) in the <i>CD44</i> gene, specifically in the 3'UTR region (rs13347) and intronic region (rs187115), on the cell surface expression of CD44 protein and the risk of development of head and neck squamous cell carcinoma (HNSCC).</p><p><strong>Materials and methods: </strong>The study involved analysis of 85 samples and 85 healthy controls. Immunohistochemistry (IHC) and flow cytometry were used to assess cell surface protein expression using CD44 antibody. DNA from formalin-fixed paraffin-embedded tissue sections was isolated and amplified using targeted primers. Sanger sequencing of the resultant amplified products was performed to determine the genotypes of the <i>CD44</i> rs13347 and rs187115 SNPs. GTEx and RegulomeDB were queried to evaluate the genotypic effects of these variants on target gene expression and regulation.</p><p><strong>Results: </strong>A comparison between patients with HNSCC and healthy controls revealed a significant association between <i>CD44</i> rs13347 and an increased risk of HNSCC in all the analyzed models, especially the TT genotype showed a significantly higher risk with an odds ratio of 8.69 (95% CI, 2.35 to 32.09; <i>P</i> = .0003). However, no significant association was found between <i>CD44</i> rs187115 and HNSCC in any of the models analyzed (all <i>P</i> > .05). Other notable findings included significant associations between <i>CD44</i> rs13347 genotype and age (<i>P</i> = .031), number of CD44-positive tumor cells (<i>P</i> = .049), CD44 staining intensity (SI; <i>P</i> = .039), and CD44 immunoreactivity score (IRS) status (<i>P</i> = .019).</p><p><strong>Conclusion: </strong>The T allele and homozygous TT genotype of <i>CD44</i> rs13347 SNP were associated with increased susceptibility to HNSCC and decreased proportion of CD44-positive tumor cells, low SI, and reduced IRS.</p>","PeriodicalId":14806,"journal":{"name":"JCO Global Oncology","volume":"10 ","pages":"e2400084"},"PeriodicalIF":3.2,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142557872","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Development and Validation of a Clinical Prediction Model for Paclitaxel Hypersensitivity Reaction on the Basis of Real-World Data: Pac-HSR Score. 基于真实世界数据的紫杉醇超敏反应临床预测模型的开发与验证:Pac-HSR 评分。
IF 3.2 Q2 ONCOLOGY Pub Date : 2024-10-01 Epub Date: 2024-10-17 DOI: 10.1200/GO-24-00318
Sunatee Sa-Nguansai, Radasar Sukphinetkul

Purpose: Paclitaxel is effective chemotherapy against various cancers but can cause hypersensitivity reaction (HSR). This study aimed to identify predictors associated with paclitaxel HSR and develop a clinical prediction model to guide clinical decisions.

Methods: Data were collected from the medical records database of Rajavithi Hospital. Patients with cancer treated with paclitaxel from 2015 to 2022 were included, and a multivariable logistic regression analysis identified predictors associated with paclitaxel HSR. The scoring system was transformed and calibrated on the basis of diagnostic parameters. Discrimination and calibration performances were assessed. Internal validation was conducted using bootstrap resampling with 1,000 replications.

Results: This study involved 3,708 patients with cancer, with an incidence of paclitaxel HSR of 10.11%. An 11-predictor-based Pac-HSR scoring system was developed, involving the following factors: younger age; poor Eastern Cooperative Oncology Group performance status; previous history of paclitaxel HSR; medication allergy history; chronic obstructive airway disease; lung and cervical cancers; high actual dose of paclitaxel; no diphenhydramine premedication; low hemoglobin level; high WBC count; and high absolute lymphocyte count. The C-statistics was 0.73 (95% CI, 0.70 to 0.76), indicating acceptable discrimination. The P value of the Hosmer-Lemeshow goodness-of-fit test was 0.751. The ratio of observed and expected values was 1.00, indicating good calibration. At a cutoff point of 8, specificity was 75.28% and sensitivity was 57.07%. Internal validation indicated good performance with minimal bias, and decision curve analysis demonstrated improved prediction with the use of this scoring system in clinical decision making.

Conclusion: This study developed the 11-predictor-based Pac-HSR scoring system for predicting paclitaxel HSR in patients with cancer. High-risk patients identified by this score should be prioritized for close monitoring and early treatment prophylaxis.

目的:紫杉醇是治疗多种癌症的有效化疗药物,但可引起超敏反应(HSR)。本研究旨在确定与紫杉醇超敏反应相关的预测因素,并建立临床预测模型以指导临床决策:方法:从 Rajavithi 医院的病历数据库中收集数据。纳入了2015年至2022年接受紫杉醇治疗的癌症患者,并通过多变量逻辑回归分析确定了与紫杉醇HSR相关的预测因素。根据诊断参数对评分系统进行了转换和校准。评估了识别和校准性能。使用自举重采样法进行了1000次重复,进行了内部验证:这项研究涉及 3708 名癌症患者,紫杉醇 HSR 发生率为 10.11%。研究建立了一个基于 11 个预测因子的 Pac-HSR 评分系统,其中包括以下因素:年龄较小;东部合作肿瘤学组(Eastern Cooperative Oncology Group)表现较差;既往紫杉醇 HSR 病史;药物过敏史;慢性阻塞性气道疾病;肺癌和宫颈癌;紫杉醇实际剂量高;无苯海拉明预处理;低血红蛋白水平;高白细胞计数;高绝对淋巴细胞计数。C 统计量为 0.73(95% CI,0.70 至 0.76),表明区分度可以接受。Hosmer-Lemeshow 拟合优度检验的 P 值为 0.751。观察值与预期值的比值为 1.00,表明校准效果良好。在截断点为 8 时,特异性为 75.28%,灵敏度为 57.07%。内部验证表明该评分系统性能良好,偏差极小,决策曲线分析表明在临床决策中使用该评分系统可提高预测效果:本研究开发了基于 11 个预测因子的 Pac-HSR 评分系统,用于预测癌症患者的紫杉醇 HSR。通过该评分确定的高危患者应优先进行密切监测和早期预防治疗。
{"title":"Development and Validation of a Clinical Prediction Model for Paclitaxel Hypersensitivity Reaction on the Basis of Real-World Data: Pac-HSR Score.","authors":"Sunatee Sa-Nguansai, Radasar Sukphinetkul","doi":"10.1200/GO-24-00318","DOIUrl":"https://doi.org/10.1200/GO-24-00318","url":null,"abstract":"<p><strong>Purpose: </strong>Paclitaxel is effective chemotherapy against various cancers but can cause hypersensitivity reaction (HSR). This study aimed to identify predictors associated with paclitaxel HSR and develop a clinical prediction model to guide clinical decisions.</p><p><strong>Methods: </strong>Data were collected from the medical records database of Rajavithi Hospital. Patients with cancer treated with paclitaxel from 2015 to 2022 were included, and a multivariable logistic regression analysis identified predictors associated with paclitaxel HSR. The scoring system was transformed and calibrated on the basis of diagnostic parameters. Discrimination and calibration performances were assessed. Internal validation was conducted using bootstrap resampling with 1,000 replications.</p><p><strong>Results: </strong>This study involved 3,708 patients with cancer, with an incidence of paclitaxel HSR of 10.11%. An 11-predictor-based Pac-HSR scoring system was developed, involving the following factors: younger age; poor Eastern Cooperative Oncology Group performance status; previous history of paclitaxel HSR; medication allergy history; chronic obstructive airway disease; lung and cervical cancers; high actual dose of paclitaxel; no diphenhydramine premedication; low hemoglobin level; high WBC count; and high absolute lymphocyte count. The C-statistics was 0.73 (95% CI, 0.70 to 0.76), indicating acceptable discrimination. The <i>P</i> value of the Hosmer-Lemeshow goodness-of-fit test was 0.751. The ratio of observed and expected values was 1.00, indicating good calibration. At a cutoff point of 8, specificity was 75.28% and sensitivity was 57.07%. Internal validation indicated good performance with minimal bias, and decision curve analysis demonstrated improved prediction with the use of this scoring system in clinical decision making.</p><p><strong>Conclusion: </strong>This study developed the 11-predictor-based Pac-HSR scoring system for predicting paclitaxel HSR in patients with cancer. High-risk patients identified by this score should be prioritized for close monitoring and early treatment prophylaxis.</p>","PeriodicalId":14806,"journal":{"name":"JCO Global Oncology","volume":"10 ","pages":"e2400318"},"PeriodicalIF":3.2,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142465990","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Assessment of the Clinicopathologic Characteristics and Survival Rates of Colorectal Cancer Among Syrian Refugees and Turkish Population in Gaziantep Province. 评估加济安泰普省叙利亚难民和土耳其人结直肠癌的临床病理特征和存活率。
IF 3.2 Q2 ONCOLOGY Pub Date : 2024-10-01 Epub Date: 2024-11-07 DOI: 10.1200/GO.24.00211
Canan Karan, İlker Nihat Okten, Oğuzhan Kesen, Atalay Çelikyürek, Fatih Teker, Şuayib Yalçın

Purpose: Syrian refugees (SRs) have had difficulties in the diagnosis, treatment, and follow-up of chronic diseases, such as cancer, because of the conflict in the region. The cancer diagnosis and treatment process of SR are also a matter of curiosity. We aimed to compare the demographic characteristics and survival outcome data of SRs and Turkish citizens (TCs), and colorectal cancer (CRC) is one of the most common cancer types seen with similar frequency globally.

Materials and methods: A total of 421 patients with CRC were included. Overall survival (OS) was estimated using the Kaplan-Meier method, and the log-rank test was used for comparison. Patient demographic data were compared using the Pearson Chi-square test and independent t test.

Results: In total, 421 patients (282 TCs and 139 SRs) were included in this study. The mean age was 52.9 ± 14.3 years for the entire population: 55.3 ± 14.1 years for TCs and 47.9 ± 13.4 years for SRs. Forty (29%) SRs and 60 (21.4%) TCs had de novo metastatic disease (P = .08). The median OS in the general population was 57.9 months (95% CI, 40.1 to 75.7), whereas it was 80.9 months (95% CI, 56.5 to 97.2) in TCs and 42.2 months in SRs (95% CI, 27.0 to 57.4; P = .006). In the nonmetastatic group, the median OS did not reach (NR) in TCs, and it was 52.6 months (95% CI, 43.7 to 61.5) in SRs (P = .02). In the metastatic group, the median OS was 21 months (95% CI, 8.5 to 29.2) in TCs, and it was 18.9 months in SRs (95% CI, 16.3 to 25.7; P = .93).

Conclusion: The survival rate was lower in the SR group. Since CRC is also common among refugees, developing and implementing methods to improve the welfare of vulnerable populations is necessary.

目的:由于该地区的冲突,叙利亚难民(SR)在癌症等慢性病的诊断、治疗和随访方面遇到了困难。叙利亚难民的癌症诊断和治疗过程也是一个令人好奇的问题。结直肠癌(CRC)是全球最常见的癌症类型之一,其发病率与土耳其公民(TC)相似:共纳入 421 名 CRC 患者。采用 Kaplan-Meier 法估算总生存期(OS),并使用对数秩检验进行比较。采用皮尔逊卡方检验和独立t检验比较患者人口统计学数据:本研究共纳入 421 例患者(282 例 TC 和 139 例 SR)。全部患者的平均年龄为(52.9±14.3)岁:TC 为 55.3 ± 14.1 岁,SR 为 47.9 ± 13.4 岁。40例(29%)SR和60例(21.4%)TC患有新发转移性疾病(P = .08)。普通人群的中位 OS 为 57.9 个月(95% CI,40.1 至 75.7),而 TC 为 80.9 个月(95% CI,56.5 至 97.2),SR 为 42.2 个月(95% CI,27.0 至 57.4;P = .006)。在非转移组中,TC的中位OS未达到(NR),SR的中位OS为52.6个月(95% CI,43.7至61.5)(P = .02)。在转移组中,TC 的中位 OS 为 21 个月(95% CI,8.5 至 29.2),SR 为 18.9 个月(95% CI,16.3 至 25.7;P = .93):结论:SR 组的存活率较低。由于 CRC 在难民中也很常见,因此有必要制定和实施改善弱势人群福利的方法。
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引用次数: 0
Enhancing Cancer Supportive Care: Integrating Psychosocial Support, Nutrition, and Physical Activity Using Telehealth Solutions. 加强癌症支持性护理:利用远程保健解决方案整合社会心理支持、营养和体育活动。
IF 3.2 Q2 ONCOLOGY Pub Date : 2024-10-01 Epub Date: 2024-11-07 DOI: 10.1200/GO-24-00333
Cristiane Decat Bergerot, Paulo Gustavo Bergerot, Errol J Philip, Renata Ferrari, Rafaela Mota Peixoto, Tracy E Crane, Kathryn H Schmitz, Enrique Soto-Perez-de-Celis

This review explores current guidelines for integrating psychosocial support, nutrition, and physical activity into cancer care and examines the resources available to deliver comprehensive care effectively and equitably, with a focus on telehealth solutions. A review of current guidelines related to psychosocial support, nutrition, and exercise in oncology published between the years 2020 and 2024 was conducted. Additionally, relevant articles from the authors' personal archives were included. Current guidelines emphasize routine psychosocial distress screening, nutritional assessment, and tailored physical activity interventions for patients with cancer. The National Comprehensive Cancer Network and ASCO highlight the need for regular psychosocial evaluations and the management of common psychiatric disorders. The American Cancer Society and the Academy of Nutrition and Dietetics recommend nutritional screening, personalized counseling, and exercise to improve treatment tolerance and overall quality of life. Despite these recommendations, challenges such as resource limitations, time constraints, and financial barriers hinder their implementation. Integrating psychosocial support, medical nutrition therapy, and physical activity into cancer care is essential to enhancing patients' quality of life. Telehealth offers a viable solution to overcome barriers by providing remote access to supportive services, facilitating comprehensive care, and promoting patient engagement. The effectiveness of telehealth in delivering psychosocial, nutritional, and physical activity support highlights its potential to improve patient outcomes and overcome barriers to care. Telehealth technologies hold high potential to optimize cancer care delivery, ensuring personalized support for patients throughout their cancer journey.

本综述探讨了将社会心理支持、营养和体育锻炼纳入癌症护理的现行指南,并研究了有效、公平地提供综合护理的可用资源,重点关注远程医疗解决方案。本文回顾了 2020 年至 2024 年间发布的与肿瘤治疗中的社会心理支持、营养和运动相关的现行指南。此外,还收录了作者个人档案中的相关文章。目前的指南强调对癌症患者进行常规的社会心理压力筛查、营养评估和有针对性的体育锻炼干预。美国国家综合癌症网络(National Comprehensive Cancer Network)和美国癌症协会(ASCO)强调了定期进行社会心理评估和管理常见精神疾病的必要性。美国癌症协会和营养与饮食学会建议进行营养筛查、个性化咨询和锻炼,以提高治疗耐受性和整体生活质量。尽管有这些建议,但资源限制、时间限制和经济障碍等挑战阻碍了这些建议的实施。将社会心理支持、医学营养治疗和体育锻炼融入癌症护理对提高患者的生活质量至关重要。远程医疗为克服障碍提供了一个可行的解决方案,它能让患者远程获得支持性服务,促进全面护理,并提高患者的参与度。远程保健在提供社会心理、营养和体育锻炼支持方面的有效性凸显了其改善患者预后和克服护理障碍的潜力。远程保健技术在优化癌症护理服务、确保在癌症治疗过程中为患者提供个性化支持方面潜力巨大。
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引用次数: 0
Delays in Presentation, Diagnosis, and Treatment Among Patients With GI Cancer in Southwest Nigeria. 尼日利亚西南部消化道癌症患者的就诊、诊断和治疗延迟。
IF 3.2 Q2 ONCOLOGY Pub Date : 2024-10-01 Epub Date: 2024-10-17 DOI: 10.1200/GO.24.00060
Justina Ucheojor Onwuka, Funmilola Olanike Wuraola, Israel Adeyemi Owoade, Yetunde Florence Ogunyemi, Matteo Di Bernardo, Anna J Dare, Tajudeen Olakunle Mohammed, Mahdi Sheikh, Olalekan Olasehinde, T Peter Kingham, Hilary A Robbins, Olusegun Isaac Alatise

Purpose: The incidence of GI cancers is increasing in sub-Saharan African countries. We described the oncological care pathway and assessed presentation, diagnosis, and treatment intervals and delays among patients with GI cancer who presented to the Obafemi Awolowo University Teaching Hospitals Complex in Ile-Ife, Nigeria.

Methods: We analyzed data from 545 patients with GI cancer in the African Research Group for Oncology (ARGO) database. We defined presentation interval as the interval between symptom onset and presentation to tertiary hospital, diagnostic interval as between presentation and diagnosis, and treatment interval as between diagnosis and initiation of treatment. We considered >3 months, >1 month, and >1 month to be presentation, diagnosis, and treatment delays, respectively. We compared lengths of intervals using Mann-Whitney U tests and logistic regression.

Results: The most frequent cancer types were pancreatic (32%) and colorectal (28%). Most patients presented at stages III (38%) and IV (30%). The median presentation interval was 84 days (IQR, 56-191), and 49% presented after 3 months or longer. The median diagnosis and treatment intervals were 0 (IQR, 0-8) and 7 (IQR, 0-23) days, respectively. There was no relationship between age, sex, education, or distance to tertiary hospital and presentation delay, but patients with stage III to IV versus I to II had higher odds of presentation delay (odds ratio [OR], 1.68 [95% CI, 1.13 to 2.50]). Among patients with pancreatic cancer, older patients were less likely to have a diagnosis delay (OR, 0.50 [95% CI, 0.25 to 0.98]).

Conclusion: About half of patients with GI cancer in Ile-Ife, Nigeria, did not present to tertiary hospitals until more than 90 days after noticing symptoms. Efforts are warranted to improve public knowledge of GI cancer symptoms and to strengthen health systems for prompt diagnosis and referral to specialty care.

目的:在撒哈拉以南非洲国家,消化道癌症的发病率正在上升。我们描述了肿瘤治疗路径,并评估了在尼日利亚伊费岛奥巴费米-阿沃洛沃大学综合教学医院就诊的消化道癌症患者的就诊、诊断、治疗间隔和延误情况:我们分析了非洲肿瘤学研究小组(ARGO)数据库中 545 名消化道癌症患者的数据。我们将发病间隔定义为从症状出现到到三级医院就诊的间隔,诊断间隔定义为从发病到确诊的间隔,治疗间隔定义为从确诊到开始治疗的间隔。我们将大于 3 个月、大于 1 个月和大于 1 个月分别视为发病间隔、诊断间隔和治疗间隔。我们使用 Mann-Whitney U 检验和逻辑回归法比较了间隔时间的长短:最常见的癌症类型是胰腺癌(32%)和结肠直肠癌(28%)。大多数患者处于 III 期(38%)和 IV 期(30%)。中位发病间隔为 84 天(IQR,56-191),49% 的患者在 3 个月或更长时间后发病。诊断和治疗间隔的中位数分别为 0 天(IQR,0-8)和 7 天(IQR,0-23)。年龄、性别、教育程度或与三级医院的距离与就诊延迟没有关系,但III至IV期患者与I至II期患者相比,就诊延迟的几率更高(几率比[OR],1.68[95% CI,1.13至2.50])。在胰腺癌患者中,年龄较大的患者延迟诊断的可能性较小(OR,0.50 [95% CI,0.25 至 0.98]):结论:尼日利亚伊费岛约有一半的消化道癌症患者在发现症状超过 90 天后才到三级医院就诊。有必要努力提高公众对消化道癌症症状的认识,并加强医疗系统,以便及时诊断和转诊到专科医疗机构。
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引用次数: 0
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JCO Global Oncology
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