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Effect of NH4Cl supplementation on growth, photosynthesis, triacylglycerol content in Chlamydomonas reinhardtii under mixotrophic cultivation. 补充 NH4Cl 对混养条件下莱茵衣藻的生长、光合作用和三酰甘油含量的影响
IF 4 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-09-10 DOI: 10.1093/jambio/lxae233
Wattanapong Sittisaree,Kittisak Yokthongwattana,Chanat Aonbangkhen,Yodying Yingchutrakul,Sucheewin Krobthong
AIMAmmonium chloride (NH4Cl) is one of the nitrogen sources for microalgal cultivation. An excessive amounts of NH4Cl are toxic for microalgae. However, combining mixotrophic conditions and excessive quantities of NH4Cl positively affects microalgal biomass and lipid production. In this study, we investigated the impact of NH4Cl on the growth, biomass, and triglyceride (TAG) content of the green microalga Chlamydomonas reinhardtii especially under mixotrophic condition.METHODS AND RESULTSUnder photoautotrophic conditions (without organic carbon supplementation), adding 25 mM NH4Cl had no significant effect on microalgal growth or TAG content. However, under mixotrophic condition (with acetate supplementation), NH4Cl interfered with microalgal growth while inducing TAG content. To explore these effects further, we conducted a two-step cultivation process and found that NH4Cl reduced microalgal growth, but induced total lipid and TAG content, especially after 4-day cultivation. The photosynthesis performances showed that NH4Cl completely inhibited oxygen evolution on Day 4. However, NH4Cl slightly reduced the Fv/Fm ratio indicating that the NH4Cl supplementation directly affects microalgal photosynthesis. To investigate the TAG induction effect by NH4Cl, we compared the protein expression profiles of microalgae grown mixotrophically with and without 25 mM NH4Cl using a proteomics approach. This analysis identified 1,782 proteins, with putative acetate uptake transporter GFY5 and Acyl-coenzyme A oxidase being overexpressed in the NH4Cl-treated group.CONCLUSIONThese findings suggested that NH4Cl supplementation may stimulate acetate utilization and fatty acid synthesis pathways in microalgae cells. Our study indicated that NH4Cl supplementation can induce microalgal biomass and lipid production, particularly when combined with mixotrophic conditions.
AIM氯化铵(NH4Cl)是微藻培养的氮源之一。过量的 NH4Cl 对微藻有毒。然而,将混养条件与过量 NH4Cl 结合起来会对微藻的生物量和脂质产量产生积极影响。本研究探讨了 NH4Cl 对绿色微藻莱茵衣藻(Chlamydomonas reinhardtii)的生长、生物量和甘油三酯(TAG)含量的影响,尤其是在混养条件下的影响。然而,在混养条件下(补充醋酸盐),NH4Cl 会干扰微藻的生长,同时诱导 TAG 含量。为了进一步探讨这些影响,我们进行了两步培养过程,发现 NH4Cl 会降低微藻的生长,但会诱导总脂质和 TAG 的含量,尤其是在培养 4 天后。光合作用表现表明,NH4Cl 在第 4 天完全抑制了氧的进化。然而,NH4Cl 会轻微降低 Fv/Fm 比值,这表明 NH4Cl 的补充会直接影响微藻的光合作用。为了研究 NH4Cl 对 TAG 的诱导作用,我们使用蛋白质组学方法比较了在有 25 mM NH4Cl 和没有 25 mM NH4Cl 的情况下混养生长的微藻的蛋白质表达谱。该分析确定了 1,782 个蛋白质,其中推定的醋酸吸收转运体 GFY5 和酰辅酶 A 氧化酶在 NH4Cl 处理组中表达过高。我们的研究表明,补充 NH4Cl 可促进微藻生物量和脂质的产生,尤其是在与混养条件相结合的情况下。
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引用次数: 0
The effect of vitamin D3 and omega-3 combination, taken orally, on triglycerides, lining of intestine, and the biodiversity of gut microbiota in healthy rats. 口服维生素 D3 和欧米伽-3 复合物对甘油三酯、肠道内壁和肠道生物多样性的影响。
IF 3.2 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-09-02 DOI: 10.1093/jambio/lxae223
Shaymaa B Abdulrazzaq, Mahmoud Abu-Samak, Amin Omar, Muna Barakat, Lujain F Alzaghari, Ibrahim Mosleh, Moath Al-Najjar, Mohammad A A Al-Najjar

Aim: The gut microbiota plays a key role in host health. An intake of omega-3 and vitamin D3 in a separate manner is vital for maintaining good health of gut microbiota and controlling some illness manifestations. The aim of this study is to investigate the potential change in biodiversity of the gut microbiome in healthy rats supplemented with vitamin D3, omega-3 alone and their combination and to reflect onto the triglyceride levels in serum and fecal samples.

Methods and results: Using the 16S rRNA gene Miseq Illumina NGS, and monitoring triglyceride levels in serum and fecal samples coupled with several clinical parameters, we examined the effect of orally taken combination of omega-3 and vitamin D3 alongside the separate intake of supplements on gut microbiota in 24 healthy white Wistar rats for six weeks. The study findings showed that combination treatment encouraged the growth of opportunistic Clostridia class during day 21 and 42 of treatment by 7.7 and 7.4 folds, respectively, exhibited incomplete absorption levels for both supplements when used concomitantly, demonstrated a damaging effect on the gut intestinal lining wall thickness (126 µm) when compared to control group (158  µm), increasing lumen diameter (400 µm), and showed higher triglyceride level in fecal samples.

Conclusions: These findings indicate that omega-3 and vitamin D3 supplements as combination intake reveal unfavorable effects, thus, it is advised to conduct further in-depth studies to clarify the presence or absence of any chemical interaction between both supplements' molecules and to investigate based on human model to attain a superior perspective.

目的:肠道微生物群对宿主健康起着关键作用。分别摄入欧米伽-3 和维生素 D3 对维持肠道微生物群的健康和控制某些疾病的表现至关重要。本研究的目的是调查健康大鼠在补充维生素 D3、单独摄入欧米伽-3 和两者混合摄入后,肠道微生物群的生物多样性可能发生的变化,并反映血清和粪便样本中甘油三酯水平的变化:我们使用 16S rRNA 基因 Miseq Illumina NGS,监测血清和粪便样本中的甘油三酯水平以及一些临床参数,研究了口服欧米伽-3 和维生素 D3 组合以及单独摄入补充剂对 24 只健康白色 Wistar 大鼠肠道微生物群的影响:研究结果表明,在治疗的第21天和第42天,联合治疗会促进机会性梭状芽孢杆菌的生长,分别增加了7.7倍和7.4倍;同时使用两种营养补充剂时,两种营养补充剂的吸收水平均不完全;与对照组(158um)相比,联合治疗对肠道内壁厚度(126um)有破坏作用,增加了肠腔直径(400um);粪便样本中甘油三酯水平较高:这些研究结果表明,欧米伽-3和维生素D3补充剂联合摄入会产生不利影响,因此,建议开展进一步的深入研究,以明确这两种补充剂分子之间是否存在任何化学相互作用,并根据人体模型进行研究,以获得更高的视角。
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引用次数: 0
Enhanced bioremediation of soils contaminated with nicosulfuron using the bacterial complex A12. 利用复合细菌 A12 强化烟嘧磺隆污染土壤的生物修复。
IF 3.2 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-09-02 DOI: 10.1093/jambio/lxae215
Siya Wang, Meiqi Dong, Yufeng Xiao, Bingbing Yang, Hao Zhang, Xian Wu

Aims: To construct an efficient bacterial complex to degrade nicosulfuron and clarify its degradative characteristics, promote the growth of maize (Zea mays), and provide a theoretical foundation for the efficient remediation of soil contaminated with nicosulfuron.

Methods and results: Biocompatibility was determined by the filter paper sheet method by mixing Serratia marcescens A1 and Bacillus cereus A2 in a 1:1 ratio, yielding A12. The optimum culture conditions for the bacterial composite were obtained based on a three-factor, three-level analysis using response surface methodology, with 29.25 g l-1 for maltodextrin, 10.04 g l-1 for yeast extract, and 19.93 g l-1 for NaCl, which resulted in 92.42% degradation at 4 d. The degradation characteristics of A12 were clarified as follows: temperature 30°C, pH 7, initial concentration of nicosulfuron 20 mg l-1, and 4% inoculum. The ability to promote growth was determined by measuring the ratio of the lysosphere diameter (D) to the colony diameter (d), and the ability of the complex A12 to promote growth was higher than that of the two single strains.

Conclusions: Nicosulfuron degradation in sterilized and unsterilized soils reached 85.4% and 91.2% within 28 d, respectively. The ability of the strains to colonize the soil was determined by extraction of total soil DNA, primer design, and gel electrophoresis. The bioremediation effect of A12 was confirmed by the maximum recovery of fresh weight (124.35%) of nicosulfuron-sensitive crop plants and the significant recovery of soil enzyme activities, as measured by the physiological indices in the sensitive plants.

目的:构建高效降解烟嘧磺隆的细菌复合物,阐明其降解特性,促进玉米(Zea mays)生长,为烟嘧磺隆污染土壤的高效修复提供理论基础:生物相容性是通过滤纸片法测定的,方法是将 Serratia marcescens A1 和蜡样芽孢杆菌 A2 按 1:1 的比例混合,得到 A12。根据响应面法的三因素三水平分析,得到了细菌复合体的最佳培养条件:麦芽糊精为 29.25 g L-1,酵母提取物为 10.04 g L-1,NaCl 为 19.93 g L-1,4 d 时降解率为 92.42%。A12 的降解特性明确如下:温度 30°C,pH 7,烟嘧磺隆初始浓度为 20 mg L-1,接种量为 4%。通过测量溶胞直径(D)与菌落直径(d)的比值来确定促进生长的能力,复合菌株A12促进生长的能力高于两种单一菌株:结论:烟嘧磺隆在灭菌土壤和未灭菌土壤中的降解率在 28 d 内分别达到 85.4% 和 91.2%。通过提取土壤总 DNA、引物设计和凝胶电泳确定了菌株在土壤中的定殖能力。烟嘧磺隆敏感作物植株鲜重的最大恢复率(124.35%)和土壤酶活性的显著恢复证实了 A12 的生物修复效果。
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引用次数: 0
Evaluation of the long-term protection conferred by an organosilicon-based disinfectant formulation against bacterial contamination of surfaces. 评估以有机硅为基础的消毒剂配方对表面细菌污染所提供的长期保护。
IF 3.2 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-09-02 DOI: 10.1093/jambio/lxae210
Nguyen Nhat Thu Le, Jianfeng Wu, Alexander H Rickard, Chuanwu Xi

Aims: The aim of this work was to evaluate the efficacy of an organosilicon-based, commercially available antimicrobial formulation in the My-shield® product line against bacterial surface contamination.

Methods and results: The antimicrobial product was tested in vitro for its long-term persistence on surfaces and effectiveness against Staphylococcus aureus biofilms in comparison to 70% ethanol and 0.1% or 0.6% sodium hypochlorite. Field testing was also conducted over 6 weeks at a university athletic facility. In vitro studies demonstrated the log reductions achieved by the test product, 70% ethanol, and 0.1% sodium hypochlorite were 3.6, 3.1, and 3.2, respectively. The test product persisted on surfaces after washing and scrubbing, and pre-treatment with this product prevented S. aureus surface colonization for up to 30 days. In comparison, pre-treatment with 70% ethanol or 0.6% sodium hypochlorite was not protective against S. aureus biofilm formation after seven days. The field test demonstrated that weekly applications of the test product were more effective at reducing surface bacterial load than daily applications of a control product.

Conclusions: The test product conferred greater long-term protection against bacterial growth and biofilm formation by S. aureus than ethanol and sodium hypochlorite. Even with less frequent applications, the test product maintained a high level of antimicrobial activity.

目的:这项工作的目的是评估 My-shield® 产品系列中以有机硅为基础的市售抗菌剂配方对细菌表面污染的功效:与 70% 乙醇和 0.1% 或 0.6% 次氯酸钠相比,体外测试了该抗菌产品在物体表面的长期持久性以及对金黄色葡萄球菌生物膜的抗菌效果。此外,还在一所大学的体育设施进行了为期 6 周的现场测试。体外研究表明,测试产品、70% 乙醇和 0.1% 次氯酸钠的对数减少率分别为 3.6、3.1 和 3.2。测试产品在清洗和擦洗后仍能在物体表面存留,使用该产品进行预处理可防止金黄色葡萄球菌在物体表面定植长达 30 天。相比之下,用 70% 的乙醇或 0.6% 的次氯酸钠进行预处理在 7 天后也无法防止金黄色葡萄球菌生物膜的形成。现场测试表明,与每天使用对照产品相比,每周使用测试产品能更有效地减少表面细菌负荷:结论:与乙醇和次氯酸钠相比,测试产品对细菌生长和金黄色葡萄球菌生物膜的形成具有更强的长期保护作用。即使使用频率较低,测试产品也能保持较高的抗菌活性。
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引用次数: 0
The dynamic roles of intracellular vacuoles in heavy metal detoxification by Rhodotorula mucilaginosa. 黏液藻细胞内空泡在重金属解毒过程中的动态作用
IF 3.2 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-09-02 DOI: 10.1093/jambio/lxae241
Yixiao Shi, Lingyi Tang, Qi Shao, Yizhou Jiang, Zhijun Wang, Chao Peng, Tingting Gu, Zhen Li

Aims: Rhodotorula mucilaginosa (Rho) can develop a range of strategies to resist the toxicity of heavy metals. This study aimed to investigate the physiological responses and transcriptomic regulation of the fungus under different heavy metal stresses.

Methods and results: This study applied transmission electron microscopy and RNA-seq to investigate the fungal resistance to Pb, Cd, and Cu stresses. Under Pb stress, the activated autophagy-related genes, vesicle-fusing ATPase, and vacuolar ATP synthase improved vacuolar sequestration. This offsets the loss of lipids. However, the metal sequestration by vacuoles was not improved under Cd stress. Vacuolar fusion was also inhibited following the interference of intravacuolar Ca2+ due to their similar ionic radii. Cu2+ showed the maximum toxic effects due to its lowest cellular sorption (as low as 7%) with respect to Pb2+ and Cd2+, although the efflux pumps and divalent metal ion transporters partially contributed to the detoxification.

Conclusions: Divalent cation transporters and vacuolar sequestration are the critical strategies for Rho to resist Pb stress. Superoxide dismutase (SOD) is the main strategy for Cd resistance in Rho. The intracellular Cu level was decreased by efflux pump and divalent metal ion transporters.

目的:Rhodotorula mucilaginosa(Rho)可以采取一系列策略来抵抗重金属的毒性。本研究旨在探讨该真菌在不同重金属胁迫下的生理响应和转录组调控:本研究应用透射电子显微镜和 RNA-seq 技术研究了真菌对铅、镉和铜胁迫的抗性。在铅胁迫下,自噬相关基因、液泡融合 ATP 酶和液泡 ATP 合成酶被激活,从而改善了液泡螯合作用。这抵消了脂质的损失。然而,在镉胁迫下,液泡对金属的螯合作用并没有得到改善。由于离子半径相似,液泡内 Ca2+ 的干扰也抑制了液泡融合。与 Pb2+ 和 Cd2+ 相比,Cu2+ 的细胞吸附力最低(低至 7%),因此其毒性效应最大,尽管外排泵和二价金属离子转运体对解毒起了部分作用:结论:二价阳离子转运体和液泡螯合是 Rho 抵抗铅胁迫的关键策略。SOD是Rho抵抗镉的主要策略。外排泵和二价金属离子转运体降低了细胞内的铜含量。
{"title":"The dynamic roles of intracellular vacuoles in heavy metal detoxification by Rhodotorula mucilaginosa.","authors":"Yixiao Shi, Lingyi Tang, Qi Shao, Yizhou Jiang, Zhijun Wang, Chao Peng, Tingting Gu, Zhen Li","doi":"10.1093/jambio/lxae241","DOIUrl":"10.1093/jambio/lxae241","url":null,"abstract":"<p><strong>Aims: </strong>Rhodotorula mucilaginosa (Rho) can develop a range of strategies to resist the toxicity of heavy metals. This study aimed to investigate the physiological responses and transcriptomic regulation of the fungus under different heavy metal stresses.</p><p><strong>Methods and results: </strong>This study applied transmission electron microscopy and RNA-seq to investigate the fungal resistance to Pb, Cd, and Cu stresses. Under Pb stress, the activated autophagy-related genes, vesicle-fusing ATPase, and vacuolar ATP synthase improved vacuolar sequestration. This offsets the loss of lipids. However, the metal sequestration by vacuoles was not improved under Cd stress. Vacuolar fusion was also inhibited following the interference of intravacuolar Ca2+ due to their similar ionic radii. Cu2+ showed the maximum toxic effects due to its lowest cellular sorption (as low as 7%) with respect to Pb2+ and Cd2+, although the efflux pumps and divalent metal ion transporters partially contributed to the detoxification.</p><p><strong>Conclusions: </strong>Divalent cation transporters and vacuolar sequestration are the critical strategies for Rho to resist Pb stress. Superoxide dismutase (SOD) is the main strategy for Cd resistance in Rho. The intracellular Cu level was decreased by efflux pump and divalent metal ion transporters.</p>","PeriodicalId":15036,"journal":{"name":"Journal of Applied Microbiology","volume":" ","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-09-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142287926","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Isolation and identification of entomopathogenic fungi strains for Colorado potato beetle (Leptinotarsa decemlineata) control. 用于控制科罗拉多马铃薯甲虫(Leptinotarsa decemlineata)的昆虫病原真菌菌株的分离和鉴定。
IF 3.2 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-09-02 DOI: 10.1093/jambio/lxae213
Jana Konopická, Oxana Skoková Habuštová, Nicole Jánová, Martina Žurovcová, Petr Doležal, Rostislav Zemek

Aims: The Colorado potato beetle, Leptinotarsa decemlineata (Say) (Coleoptera: Chrysomelidae) is the most widespread insect pest that causes major economic losses, especially on potatoes. Due to heavy insecticide use, this species now resists most pesticides, posing a significant control challenge. Frequent pesticide application also harms non-target organisms, the environment, and human health. Hence, utilizing biocontrol agents like entomopathogenic fungi (EPF) offers a viable alternative for pest management. The aim of this study was to identify and characterize new EPF strains isolated from soil samples and evaluate their efficacy against adult L. decemlineata under laboratory conditions.

Methods and results: Soil samples were collected in potato fields or uncultivated areas adjacent to the field in the Czech Republic and the EPF strains were isolated using a modified Tenebrio bait method. A total of 20 fungal strains were isolated and identified using morphological and molecular markers based on the 28S rRNA, ITS, and elongation factor 1-alpha gene sequences as Beauveria bassiana (Bals.-Criv.) Vuill., Beauveria brongniartii (Sacc.) Petch, and Cordyceps fumosorosea (Wize) Kepler, B. Shrestha & Spatafora (Hypocreales: Cordycipitaceae), Purpureocillium lilacinum (Thom.) Luangsa-ard, Houbraken, Hywel-Jones & Samson (Hypocreales: Ophiocordycipitaceae), Metarhizium brunneum (Petch), and Metarhizium robertsii Bisch., Rehner & Humber (Hypocreales: Clavicipitaceae). The bioassays revealed high variability among virulence of these strains against L. decemlineata with the shortest median time to death (LT50 = 5 days) in M. robertsii strain MAN3b.

Conclusions: Results shown that some EPF strains, particularly those of genera Metarhizium, can be promising biocontrol agents against the Colorado potato beetle.

目的:科罗拉多马铃薯甲虫 Leptinotarsa decemlineata (Say)(鞘翅目:蝶形目)是造成重大经济损失的最普遍害虫,尤其是在马铃薯上。由于杀虫剂的大量使用,这种害虫现在对大多数杀虫剂产生了抗药性,给防治工作带来了巨大挑战。频繁施用杀虫剂还会危害非目标生物、环境和人类健康。因此,利用昆虫病原真菌(EPF)等生物控制剂为害虫管理提供了一种可行的替代方法。本研究的目的是鉴定和描述从土壤样本中分离出来的新 EPF 菌株,并在实验室条件下评估它们对 L. decemlineata 成虫的功效:方法:在捷克共和国的马铃薯田或邻近田地的未开垦区域采集土壤样本,采用改良的天牛诱饵法分离 EPF 菌株。共分离出 20 株真菌,并根据 28S rRNA、ITS 和伸长因子 1-α 基因序列利用形态学和分子标记鉴定为 Beauveria bassiana (Bals.-Criv.) Vuill、Beauveria brongniartii (Sacc.) Petch 和 Cordyceps fumosorosea (Wize) Kepler, B. Shrestha & Spatafora (Hypocreales: Cordycipitaceae), Purpureocillium lilacinum (Thom.) Luangsa-ard, Hou.Luangsa-ard, Houbraken, Hywel-Jones & Samson (Hypocreales: Ophiocordycipitaceae), Metarhizium brunneum (Petch) and Metarhizium robertsii Bisch、Rehner & Humber(Hypocreales: Clavicipitaceae)。生物测定显示,这些菌株对 L. decemlineata 的毒力差异很大,M. robertsii 菌株 MAN3b 的中位死亡时间(LT50 = 5.0 天)最短:研究结果表明,一些 EPF 菌株,尤其是 Metarhizium 属的菌株,是很有希望的科罗拉多马铃薯甲虫生物控制剂。
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引用次数: 0
Rhizobacterial diversity of Portuguese olive cultivars in the Douro valley and their potential as plant growth promoters. 杜罗河谷葡萄牙橄榄栽培品种的根瘤菌多样性及其作为植物生长促进剂的潜力。
IF 3.2 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-09-02 DOI: 10.1093/jambio/lxae220
Isabel N Sierra-Garcia, Maria J Ferreira, Camille E Granada, Carla Patinha, Ângela Cunha

Aims: This study investigated the bacterial communities in the rhizosphere of two traditional Portuguese olive cultivars, Cobrançosa and Negrinha de Freixo, in relation to soil properties. Additionally, we aimed to isolate and identify bacteria with potential for biocontrol and other plant growth-promoting traits from these rhizosphere communities.

Methods and results: Bacterial communities in the olive rhizosphere were investigated using a metabarcoding approach and the soil physicochemical properties of the olive groves were also analyzed. Higher bacterial richness was associated with Negrinha de Freixo growing in soil with high organic matter content and water-holding capacity. In contrast, the soils of the Cobrançosa grove presented higher pH and electric conductivity. Negrinha de Freixo rhizosphere was enriched with ASVs (Amplicon Sequence Variants) belonging to Bacillus, Gaiella, Acidothermus, Bradyrhizobium, and uncultured Xanthobacteraceae. On the other hand, the Cobrançosa rhizosphere was characterized by higher relative abundance of Streptomyces and Sphingomonas. Bacterial isolation from the rhizosphere and screening for plant growth-promoting activities were also performed. Six bacteria strains, predominantly Bacillus isolated from Negrinha de Freixo, demonstrated antagonistic activities against the olive fungal pathogen Colletotrichum gloeosporoides and other plant growth promotion (PGP) traits.

Conclusions: Our findings demonstrate that the structure of rhizosphere bacterial communities associated with olive trees is shaped by both plant cultivar and soil-related factors. The higher number of bacterial species in the rhizosphere of Negrinha de Freixo was related to a higher organic matter content and a greater abundance of isolates with plant growth promotion traits, particularly Bacillus strains.

目的:本研究调查了葡萄牙两个传统橄榄品种 Cobrançosa 和 Negrinha de Freixo 根瘤菌群落与土壤特性的关系。此外,我们还旨在从这些根瘤菌群中分离和鉴定具有生物控制潜力和其他植物生长促进特性的细菌:方法:我们采用代谢条形码方法调查了橄榄根圈中的细菌群落,并分析了橄榄园的土壤理化性质。生长在有机质含量高、持水能力强的土壤中的 Negrinha de Freixo 的细菌丰富度较高。相比之下,Cobrançosa 橄榄园的土壤pH值和电导率较高。Negrinha de Freixo 的根圈富含属于芽孢杆菌、盖拉菌、酸性热菌、巴西根瘤菌和未培养的黄杆菌科的 ASVs(扩增序列变体)。另一方面,Cobrançosa 根瘤菌群的特点是链霉菌和鞘氨单胞菌相对较多。此外,还从根瘤菌层中分离出细菌,并筛选出具有促进植物生长活性的细菌。从 Negrinha de Freixo 分离的六株细菌(主要是芽孢杆菌)表现出了对橄榄真菌病原体 C. gloeosporoides 的拮抗活性和其他植物生长促进特性(PGP):我们的研究结果表明,与橄榄树相关的根瘤菌群落结构受植物栽培和土壤相关因素的影响。Negrinha de Freixo根瘤菌群中细菌种类较多,这与有机质含量较高以及具有植物生长促进特性的分离菌株(尤其是芽孢杆菌菌株)较多有关。
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引用次数: 0
Potential therapeutic use of dermaseptin S4 from the frog Phyllomedusa sauvagii and its derivatives against bacterial pathogens in fish. 蛙皮素 S4 及其衍生物对鱼类细菌性病原体的潜在治疗作用。
IF 3.2 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-09-02 DOI: 10.1093/jambio/lxae222
Afef Braik, John Alberto Serna-Duque, Adel Nefzi, Sonia Aroui, María Ángeles Esteban

Aim: Dermaseptins are one of the main families of antimicrobial peptides (AMPs) derived from the skin secretions of Hylidae frogs. Among them, dermaseptin S4 (DS4) is characterized by its broad-spectrum of activity against bacteria, protozoa, and fungi. In this study, the physicochemical properties of the native peptide DS4 (1-28) and two derivatives [DS4 (1-28)a and DS4 (1-26)a] isolated from the skin of the frog Phyllomedusa sauvagii were investigated and their antimicrobial properties against two marine pathogenic bacteria (Vibrio harveyi and Vibrio anguillarum) were examined.

Methods and results: The results indicate that the peptide DS4 (1-26)a has high-antibacterial activity against the tested strains and low-hemolytic activity (<30% lysis at the highest tested concentration of 100 µg/mL) compared to the other two peptides tested. In addition, all three peptides affect the membrane and cell wall integrity of both pathogenic bacteria, causing leakage of cell contents, with DS4 (1-26)a having the most severe impact. These skills were corroborated by transmission electron microscopy and by the variation of cations in their binding sites due to the effects caused by the AMPs.

Conclusions: These results suggest that DS4 and its derivatives, in particular the truncated and amidated peptide DS4 (1-26)a could be effective in the treatment of infections caused by these marine pathogenic bacteria. Future studies are required to validate the use of DS4  in vivo for the prevention of bacterial diseases in fish.

目的:皮肤肽是从姬蛙科青蛙的皮肤分泌物中提取的抗菌肽(AMPs)的主要家族之一。其中,皮肤肽 S4(DS4)具有抗细菌、原生动物和真菌的广谱活性。本研究研究了从蛙皮中分离出的原生肽 DS4 (1-28) 和两种衍生物 [DS4 (1-28)a 和 DS4 (1-26)a]的理化性质,并考察了它们对两种海洋致病菌(V. harveyi 和 V. anguillarum)的抗菌特性:结果表明,与其他两种肽相比,肽 DS4 (1-26)a 对所测试的菌株具有较高的抗菌活性和较低的溶血活性(在 100 µg mL -1 的最高测试浓度下,溶血率小于 30%)。此外,所有三种肽都会影响两种病原菌的膜和细胞壁完整性,导致细胞内容物渗漏,其中 DS4 (1-26)a 的影响最为严重。透射电子显微镜和 AMPs 影响导致的结合位点阳离子变化证实了这些技能:这些结果表明,DS4 及其衍生物,特别是截短和酰胺化的多肽 DS4 (1-26)a 可以有效治疗这些海洋致病菌引起的感染。未来的研究需要验证 DS4 在体内用于预防鱼类细菌性疾病的有效性。
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引用次数: 0
Purification of proanthocyanidins from nut seeds and study on its bactericidal mechanism against Streptococcus mutans. 从坚果种子中提纯原花青素并研究其对变异链球菌的杀菌机制。
IF 3.2 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-09-02 DOI: 10.1093/jambio/lxae209
Zaixiang Lou, Xiaoyuan Fan, Caihua Liu, Yuemei Liao, Xiaojing Du, Hongxin Wang

Aim: The aim of this study was to purify proanthocyanidins from areca nut seeds (P-AN) and to investigate the bactericidal activity and mechanism of the purified products against Streptococcus mutans.

Methods and results: Ultra-performance liquid chromatography tandem quadrupole time-of-flight mass spectrometry, Fourier transform infrared, Matrix-assisted laser desorption/ ionization time of flight mass spectrometry (MADLI-TOF-MS), and thiolysis experiment were used for P-AN chemical analysis. Time-kill analysis and glycolytic pH drop were used to evaluate the activity of S. mutans in vitro. Meanwhile, the investigation of the bacteriostatic mechanism included membrane protein, fluidity, permeability, and integrity tests. The results showed that P-AN was a kind of proanthocyanidin mainly composed of B-type proanthocyanidins and their polymers. Moreover, MADLI-TOF-MS and thiolysis experiments demonstrated that the degree of polymerization of P-AN was 13. The time-kill analysis showed that P-AN had strong bactericidal activity against S. mutans. P-AN at minimum inhibitory concentration (MIC) concentrations was able to induce S. mutans death, while complete lethality occurred at 2 MIC. Glycolysis test showed that P-AN significantly inhibited S. mutans acid production (P < .01). The morphological changes of S. mutans were observed by scanning electron microscopy and transmission electron microscopy experiments, which indicated that P-AN destroyed the cellular structure of S. mutans. At the same time, significant changes were observed in membrane proteins, fluidity, permeability, and integrity.

Conclusion: P-AN can effectively inhibit the activity of S. mutans. P-AN can reduce the erosion of the tooth surface by the acid of S. mutans. P-AN could break the structure of the cell membrane protein of S. mutans. P-AN could destroy the integrity of membrane, resulting in the death of S. mutans.

目的:本研究旨在从果仁中提纯原花青素(P-AN),并研究提纯产物对突变菌的杀菌活性和机制:采用UPLC-Q-TOF-MS、FT-IR、MADLI-TOF-MS和硫解实验对P-AN进行化学分析。采用时间杀伤分析和糖酵解 pH 值下降来评价突变酵母菌的体外活性。同时,抑菌机制的研究包括膜蛋白、流动性、渗透性和完整性测试。结果表明,P-AN是一种原花青素,主要由B型原花青素及其聚合物组成。此外,MADLI-TOF-MS 和硫解实验表明,P-AN 的聚合度(DP)为 13。时间杀灭分析表明,P-AN 对突变菌具有很强的杀菌活性。在 MIC 浓度下,P-AN 能够诱导变异杆菌死亡,而在 MIC 浓度为 2 时,变异杆菌完全死亡。糖酵解试验表明,P-AN 能显著抑制变异杆菌产酸(p < 0.01)。通过 SEM 和 TEM 实验观察了变异杆菌的形态变化,表明 P-AN 破坏了变异杆菌的细胞结构。同时,膜蛋白、流动性、渗透性和完整性也发生了显著变化:结论:P-AN 能有效抑制变异杆菌的活性。结论:P-AN 能有效抑制变异杆菌的活性,减少变异杆菌酸性物质对牙齿表面的侵蚀。P-AN 可破坏变异杆菌细胞膜蛋白质的结构。P-AN 能破坏细胞膜的完整性,导致变异杆菌死亡。
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引用次数: 0
The impact of heat treatment on E. coli cell physiology in rich and minimal media considering oxidative secondary stress. 热处理对富集培养基和极少培养基中大肠杆菌细胞生理的影响(考虑氧化次生压力)。
IF 3.2 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-09-02 DOI: 10.1093/jambio/lxae216
Khanh C Vo, Jin J Sakamoto, Masakazu Furuta, Tetsuaki Tsuchido

Aims: This study investigates the cell physiology of thermally injured bacterial cells, with a specific focus on oxidative stress and the repair mechanisms associated with oxidative secondary stress.

Methods and results: We explored the effect of heat treatment on the activity of two protective enzymes, levels of intracellular reactive oxygen species, and redox potential. The findings reveal that enzyme activity slightly increased after heat treatment, gradually returning to baseline levels during subculture. The response of Escherichia coli cells to heat treatment, as assessed by the level of superoxide radicals generated and redox potential, varied based on growth conditions, namely minimal and rich media. Notably, the viability of injured cells improved when antioxidants were added to agar media, even in the presence of metabolic inhibitors.

Conclusions: These results suggest a complex system involved in repairing damage in heat-treated cells, particularly in rich media. While repairing membrane damage is crucial for cell regrowth and the electron transport system plays a critical role in the recovery process of injured cells under both tested conditions.

目的:本研究调查了热损伤细菌细胞的细胞生理学,特别关注氧化应激以及与氧化次生应激相关的修复机制:我们探讨了热处理对两种保护性酶的活性、细胞内活性氧水平和氧化还原电位的影响。研究结果表明,热处理后酶活性略有增加,在亚培养过程中逐渐恢复到基线水平。根据产生的超氧自由基水平和氧化还原电位评估,大肠杆菌细胞对热处理的反应因生长条件(即最小培养基和富培养基)而异。值得注意的是,在琼脂培养基中添加抗氧化剂后,即使存在代谢抑制剂,受伤细胞的存活率也会提高:这些结果表明,在热处理细胞中,特别是在富培养基中,修复损伤涉及一个复杂的系统。在两种测试条件下,修复膜损伤对细胞再生至关重要,而电子传递系统在损伤细胞的恢复过程中起着关键作用。
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引用次数: 0
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Journal of Applied Microbiology
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