首页 > 最新文献

Journal of Biomedical Research最新文献

英文 中文
Taxonomic diversity of fecal microbiota associated with different metabolic phenotypes in residents of Arkhangelsk, Northwestern Russia. 俄罗斯西北部阿尔汉格尔斯克居民与不同代谢表型相关的粪便微生物群的分类多样性
IF 2.4 4区 医学 Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-10-25 DOI: 10.7555/JBR.39.20250258
Anna Postoeva, Ekaterina Krieger, Anna Leontyeva, Alexander V Kudryavtsev, Julia Galeeva, Dmitry Fedorov, Polina Kuzmichenko, Elena Ilina, Vadim Govorun

The study aimed to assess the taxonomic diversity and composition of gut microbiota in Arkhangelsk residents, Northwestern Russia, with varying metabolic statuses. A population-based cross-sectional "Know Your Heart" study (2015-2017, participants aged 35-69 years) included a health examination and gut microbiota analysis ( n = 685). Participants were divided into four metabolic phenotypes: metabolically healthy non-obese (MHN), metabolically unhealthy non-obese (MUN), metabolically healthy obese (MHO), and metabolically unhealthy obese (MUO). Analyses were performed using RStudio software (v.4.2.0) with the vegan and phyloseq packages (v.1.42.0) for microbiota analysis. The sample was distributed across phenotypes as follows: MHN (47.6%), MUN (22.1%), MHO (10.4%), and MUO (19.9%). Beta-diversity analysis revealed significant differences in overall microbiome composition between MUO and MHN participants, while alpha-diversity did not differ significantly across phenotypes. The MHN group was characterized by a higher abundance of beneficial commensals such as Christensenellaceae R-7 group, Ruminococcaceae UCG-005, and Eubacterium xylanophilum group, which are taxa previously associated with metabolic health and longevity. In contrast, the MUO group showed an increased abundance of Streptococcus salivarius and Negativibacillus, taxa linked to gut dysbiosis and metabolic disorders. Blautia spp. emerged as a major hub in the microbiota of obese participants, consistent with its reported association with visceral fat. In conclusion, microbial composition was similar in obese participants despite metabolic dysfunction, whereas unidirectional taxonomic shifts were observed in those with metabolic dysfunction alone. The differences in the predominance of microbial taxa across metabolic phenotypes suggest that these taxa have a role in the development of metabolic disorders and obesity.

该研究旨在评估俄罗斯西北部阿尔汉格尔斯克居民肠道微生物群的分类多样性和组成,这些居民具有不同的代谢状态。一项基于人群的横断面“了解你的心脏”研究(2015-2017年,参与者年龄在35-69岁)包括健康检查和肠道微生物群分析(n = 685)。参与者被分为四种代谢表型:代谢健康非肥胖(MHN)、代谢不健康非肥胖(MUN)、代谢健康肥胖(MHO)和代谢不健康肥胖(MUO)。分析使用RStudio软件(v.4.2.0)和vegan和phyloseq软件包(v.1.42.0)进行微生物群分析。样本的表型分布如下:MHN(47.6%)、MUN(22.1%)、MHO(10.4%)和MUO(19.9%)。β -多样性分析显示,MUO和MHN参与者的总体微生物组组成存在显著差异,而α -多样性在不同表型之间没有显著差异。MHN组具有更高丰度的有益共生菌,如Christensenellaceae R-7组、Ruminococcaceae UCG-005和嗜木真杆菌(Eubacterium xylanophilum)组,这些类群以前与代谢健康和长寿相关。相比之下,MUO组显示唾液链球菌和阴性杆菌的丰度增加,这些分类群与肠道生态失调和代谢紊乱有关。Blautia spp成为肥胖参与者微生物群的主要中心,与报道的与内脏脂肪的关联一致。综上所述,尽管存在代谢功能障碍,但肥胖参与者的微生物组成相似,而在单独存在代谢功能障碍的参与者中,微生物分类学发生了单向变化。微生物类群在代谢表型上的优势差异表明,这些类群在代谢紊乱和肥胖的发展中起作用。
{"title":"Taxonomic diversity of fecal microbiota associated with different metabolic phenotypes in residents of Arkhangelsk, Northwestern Russia.","authors":"Anna Postoeva, Ekaterina Krieger, Anna Leontyeva, Alexander V Kudryavtsev, Julia Galeeva, Dmitry Fedorov, Polina Kuzmichenko, Elena Ilina, Vadim Govorun","doi":"10.7555/JBR.39.20250258","DOIUrl":"https://doi.org/10.7555/JBR.39.20250258","url":null,"abstract":"<p><p>The study aimed to assess the taxonomic diversity and composition of gut microbiota in Arkhangelsk residents, Northwestern Russia, with varying metabolic statuses. A population-based cross-sectional \"Know Your Heart\" study (2015-2017, participants aged 35-69 years) included a health examination and gut microbiota analysis ( <i>n</i> = 685). Participants were divided into four metabolic phenotypes: metabolically healthy non-obese (MHN), metabolically unhealthy non-obese (MUN), metabolically healthy obese (MHO), and metabolically unhealthy obese (MUO). Analyses were performed using RStudio software (v.4.2.0) with the vegan and phyloseq packages (v.1.42.0) for microbiota analysis. The sample was distributed across phenotypes as follows: MHN (47.6%), MUN (22.1%), MHO (10.4%), and MUO (19.9%). Beta-diversity analysis revealed significant differences in overall microbiome composition between MUO and MHN participants, while alpha-diversity did not differ significantly across phenotypes. The MHN group was characterized by a higher abundance of beneficial commensals such as <i>Christensenellaceae R-7</i> group, <i>Ruminococcaceae UCG-005</i>, and <i>Eubacterium xylanophilum</i> group, which are taxa previously associated with metabolic health and longevity. In contrast, the MUO group showed an increased abundance of <i>Streptococcus salivarius</i> and <i>Negativibacillus</i>, taxa linked to gut dysbiosis and metabolic disorders. <i>Blautia spp</i>. emerged as a major hub in the microbiota of obese participants, consistent with its reported association with visceral fat. In conclusion, microbial composition was similar in obese participants despite metabolic dysfunction, whereas unidirectional taxonomic shifts were observed in those with metabolic dysfunction alone. The differences in the predominance of microbial taxa across metabolic phenotypes suggest that these taxa have a role in the development of metabolic disorders and obesity.</p>","PeriodicalId":15061,"journal":{"name":"Journal of Biomedical Research","volume":" ","pages":"1-17"},"PeriodicalIF":2.4,"publicationDate":"2025-10-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145458596","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
NS3 epitope-decorated nanoparticles produced in bacteria trigger potent T cell immunity against hepatitis C virus. 细菌中产生的NS3修饰纳米颗粒可触发T细胞对丙型肝炎病毒的有效免疫。
IF 2.4 4区 医学 Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-10-25 DOI: 10.7555/JBR.39.20250197
Victor V Kuprianov, Lyudmila I Nikolaeva, Maya D Stuchinskaya, Аnna A Zykova, Nikolai V Ravin

The highly conserved human leukocyte antigen-A2 (HLA-A2)-restricted epitope NS3-1073 represents a promising candidate for a therapeutic vaccine against hepatitis C virus (HCV). In this study, we engineered a set of fusion proteins based on the artificial peptide SAP, which were expressed in Escherichia coli and spontaneously self-assembled into nanosized particles displaying HCV epitopes, including NS3-1073. To enhance immunogenicity, the T helper epitope PADRE was incorporated into the construct. Alpha-helical linkers were introduced between SAP and the epitopes to facilitate proper protein folding. Notably, a helical linker with a high supercoiling propensity enabled soluble expression of the fusion protein containing both the NS3-1073 and PADRE, allowing purification of the in vivo-formed nanoparticles by metal affinity chromatography. Human dendritic cells derived from peripheral blood monocytes showed robust activation in response to the fusion proteins and preferentially stimulated T lymphocytes toward a Th1-biased immune response. In mice, immunization with nanoparticles carrying NS3-1073 induced splenocyte proliferation in response to in vitro stimulation with a mixture of NS3 peptides. These results demonstrate that recombinant nanoparticle-based carriers presenting the NS3-1073 epitope can be produced in bacterial systems and hold strong potential as a foundation for a therapeutic HCV vaccine.

高度保守的人白细胞抗原a2 (HLA-A2)限制性表位NS3-1073是抗丙型肝炎病毒(HCV)治疗性疫苗的一个有希望的候选物。在这项研究中,我们设计了一组基于人工肽SAP的融合蛋白,这些融合蛋白在大肠杆菌中表达,并自发自组装成显示HCV表位的纳米颗粒,包括NS3-1073。为了增强免疫原性,将T辅助表位PADRE加入到构建中。在SAP和表位之间引入了α -螺旋连接物,以促进适当的蛋白质折叠。值得注意的是,一个具有高超卷曲倾向的螺旋连接体使得含有NS3-1073和PADRE的融合蛋白可溶表达,从而允许通过金属亲和层析纯化体内形成的纳米颗粒。来源于外周血单核细胞的人树突状细胞对融合蛋白表现出强烈的激活反应,并优先刺激T淋巴细胞产生th1偏向性免疫反应。在小鼠中,携带NS3-1073的纳米颗粒免疫可诱导脾细胞对NS3多肽混合物的体外刺激产生增殖反应。这些结果表明,具有NS3-1073表位的重组纳米颗粒载体可以在细菌系统中产生,并具有作为治疗性HCV疫苗基础的强大潜力。
{"title":"NS3 epitope-decorated nanoparticles produced in bacteria trigger potent T cell immunity against hepatitis C virus.","authors":"Victor V Kuprianov, Lyudmila I Nikolaeva, Maya D Stuchinskaya, Аnna A Zykova, Nikolai V Ravin","doi":"10.7555/JBR.39.20250197","DOIUrl":"https://doi.org/10.7555/JBR.39.20250197","url":null,"abstract":"<p><p>The highly conserved human leukocyte antigen-A2 (HLA-A2)-restricted epitope NS3-1073 represents a promising candidate for a therapeutic vaccine against hepatitis C virus (HCV). In this study, we engineered a set of fusion proteins based on the artificial peptide SAP, which were expressed in <i>Escherichia coli</i> and spontaneously self-assembled into nanosized particles displaying HCV epitopes, including NS3-1073. To enhance immunogenicity, the T helper epitope PADRE was incorporated into the construct. Alpha-helical linkers were introduced between SAP and the epitopes to facilitate proper protein folding. Notably, a helical linker with a high supercoiling propensity enabled soluble expression of the fusion protein containing both the NS3-1073 and PADRE, allowing purification of the <i>in vivo</i>-formed nanoparticles by metal affinity chromatography. Human dendritic cells derived from peripheral blood monocytes showed robust activation in response to the fusion proteins and preferentially stimulated T lymphocytes toward a Th1-biased immune response. In mice, immunization with nanoparticles carrying NS3-1073 induced splenocyte proliferation in response to <i>in vitro</i> stimulation with a mixture of NS3 peptides. These results demonstrate that recombinant nanoparticle-based carriers presenting the NS3-1073 epitope can be produced in bacterial systems and hold strong potential as a foundation for a therapeutic HCV vaccine.</p>","PeriodicalId":15061,"journal":{"name":"Journal of Biomedical Research","volume":" ","pages":"1-11"},"PeriodicalIF":2.4,"publicationDate":"2025-10-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145451994","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
CRISPR/Cas9-mediated genome editing reveals six testis-enriched genes dispensable for male fertility in mice. CRISPR/ cas9介导的基因组编辑揭示了小鼠雄性生殖能力中不可或缺的六个睾丸富集基因。
IF 2.4 4区 医学 Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-10-25 DOI: 10.7555/JBR.39.20250247
Heling Fu, Haoran Chen, Chenmeijie Li, Shuai Lu, Yayun Gu, Zhibin Hu

The genetic landscape of male infertility is highly complex. It is estimated that at least 1000-2000 genes are involved in human and mouse infertility. Although functional analyses have been performed on hundreds of genes, many others still have unknown functions. Generating gene-editing mice is a powerful tool for exploring whether a given gene is essential for male reproduction in vivo. In this study, we investigated the function of six genes, Efcab7, Tekt3, Mlf1, Rp1l1, Agbl2, and Tmsb15a, using the CRISPR/Cas9 system. Mating tests with mutant mice revealed that all six genes are dispensable for male fecundity when individually ablated. Meanwhile, phenotypic analyses of testicular appearance and weight, testis and epididymis morphology, and sperm motility parameters in these six mutant mice also showed no significant differences compared with wild-type mice. In summary, our results suggested that these six genes could be deprioritized for other researchers when they are interested in their roles in male infertility, thereby preventing duplicative research efforts.

男性不育症的遗传景观是高度复杂的。据估计,至少有1000-2000个基因与人类和小鼠不孕有关。尽管已经对数百个基因进行了功能分析,但许多其他基因的功能仍然未知。产生基因编辑小鼠是一个强大的工具,用于探索一个给定的基因是否对体内的雄性生殖至关重要。在本研究中,我们利用CRISPR/Cas9系统研究了Efcab7、Tekt3、Mlf1、Rp1l1、Agbl2和Tmsb15a六个基因的功能。对突变小鼠的交配试验表明,当单独切除时,所有六个基因对雄性繁殖力都是必不可少的。同时,6只突变小鼠的睾丸外观和重量、睾丸和附睾形态、精子运动参数的表型分析也与野生型小鼠无显著差异。总之,我们的结果表明,当其他研究人员对这六个基因在男性不育中的作用感兴趣时,可以优先考虑这六个基因,从而防止重复的研究工作。
{"title":"CRISPR/Cas9-mediated genome editing reveals six testis-enriched genes dispensable for male fertility in mice.","authors":"Heling Fu, Haoran Chen, Chenmeijie Li, Shuai Lu, Yayun Gu, Zhibin Hu","doi":"10.7555/JBR.39.20250247","DOIUrl":"https://doi.org/10.7555/JBR.39.20250247","url":null,"abstract":"<p><p>The genetic landscape of male infertility is highly complex. It is estimated that at least 1000-2000 genes are involved in human and mouse infertility. Although functional analyses have been performed on hundreds of genes, many others still have unknown functions. Generating gene-editing mice is a powerful tool for exploring whether a given gene is essential for male reproduction <i>in vivo</i>. In this study, we investigated the function of six genes, <i>Efcab7</i>, <i>Tekt3</i>, <i>Mlf1</i>, <i>Rp1l1</i>, <i>Agbl2</i>, and <i>Tmsb15a</i>, using the CRISPR/Cas9 system. Mating tests with mutant mice revealed that all six genes are dispensable for male fecundity when individually ablated. Meanwhile, phenotypic analyses of testicular appearance and weight, testis and epididymis morphology, and sperm motility parameters in these six mutant mice also showed no significant differences compared with wild-type mice. In summary, our results suggested that these six genes could be deprioritized for other researchers when they are interested in their roles in male infertility, thereby preventing duplicative research efforts.</p>","PeriodicalId":15061,"journal":{"name":"Journal of Biomedical Research","volume":" ","pages":"1-14"},"PeriodicalIF":2.4,"publicationDate":"2025-10-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145451958","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Opioids regulate the functional state of immune cells and reduce inflammatory cardiac injury: Role of opioid receptors, MRGPRX2, and TLR4. 阿片受体、MRGPRX2和TLR4在调节免疫细胞功能状态和减轻炎症性心脏损伤中的作用
IF 2.4 4区 医学 Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-10-25 DOI: 10.7555/JBR.39.20250328
Svetlana V Gusakova, Maria Sirotina, Leonid N Maslov, Alisa S Slidnevskaya, Mikhail Kilin, Boris K Kurbatov, Artur Kan, Ivan A Derkachev, Feng Fu

Neutrophils, macrophages, CD3 +, CD4 +, and CD8 + T-lymphocytes express µ-, δ-, and κ-opioid receptors (ORs) with both high and low affinities for opioids. Mast cells express the atypical OR mas-related G-protein-coupled receptor X2 (MRGPRX2), which has a low affinity for morphine. Neutrophils and macrophages synthesize and release opioid peptides. The activation of ORs increases the synthesis of proinflammatory cytokines and the production of reactive oxygen species (ROS) in unstimulated leukocytes. Conversely, the activation of ORs reduces proinflammatory cytokine synthesis in stimulated neutrophils and macrophages. Morphine inhibits Toll-like receptor 4 (TLR4) expression in macrophages, thereby reducing inflammation. Methadone induces ROS production in mast cells through the activation of TLR4. Stimulation of TLR4 induces β-endorphin synthesis in macrophages. The production of pro-inflammatory cytokines and ROS contributes to cardiac reperfusion injury. The activation of κ 1- and µ-ORs reduces pro-inflammatory cytokine production by leukocytes and suppresses inflammatory injury to the heart and other organs.

中性粒细胞、巨噬细胞、CD3 +、CD4 +和CD8 + t淋巴细胞表达对阿片具有高亲和力和低亲和力的µ-、δ-和κ-阿片受体(ORs)。肥大细胞表达非典型OR肿块相关g蛋白偶联受体X2 (MRGPRX2),该受体对吗啡的亲和力较低。中性粒细胞和巨噬细胞合成并释放阿片肽。ORs的激活增加了未受刺激的白细胞中促炎细胞因子的合成和活性氧(ROS)的产生。相反,ORs的激活减少了受刺激的中性粒细胞和巨噬细胞中促炎细胞因子的合成。吗啡抑制巨噬细胞中toll样受体4 (TLR4)的表达,从而减轻炎症。美沙酮通过激活TLR4诱导肥大细胞产生ROS。刺激TLR4可诱导巨噬细胞合成β-内啡肽。促炎细胞因子和ROS的产生有助于心脏再灌注损伤。κ 1-和µ- ors的激活可减少白细胞产生的促炎细胞因子,抑制心脏和其他器官的炎症损伤。
{"title":"Opioids regulate the functional state of immune cells and reduce inflammatory cardiac injury: Role of opioid receptors, MRGPRX2, and TLR4.","authors":"Svetlana V Gusakova, Maria Sirotina, Leonid N Maslov, Alisa S Slidnevskaya, Mikhail Kilin, Boris K Kurbatov, Artur Kan, Ivan A Derkachev, Feng Fu","doi":"10.7555/JBR.39.20250328","DOIUrl":"https://doi.org/10.7555/JBR.39.20250328","url":null,"abstract":"<p><p>Neutrophils, macrophages, CD3 <sup>+</sup>, CD4 <sup>+</sup>, and CD8 <sup>+</sup> T-lymphocytes express µ-, δ-, and κ-opioid receptors (ORs) with both high and low affinities for opioids. Mast cells express the atypical OR mas-related G-protein-coupled receptor X2 (MRGPRX2), which has a low affinity for morphine. Neutrophils and macrophages synthesize and release opioid peptides. The activation of ORs increases the synthesis of proinflammatory cytokines and the production of reactive oxygen species (ROS) in unstimulated leukocytes. Conversely, the activation of ORs reduces proinflammatory cytokine synthesis in stimulated neutrophils and macrophages. Morphine inhibits Toll-like receptor 4 (TLR4) expression in macrophages, thereby reducing inflammation. Methadone induces ROS production in mast cells through the activation of TLR4. Stimulation of TLR4 induces β-endorphin synthesis in macrophages. The production of pro-inflammatory cytokines and ROS contributes to cardiac reperfusion injury. The activation of κ <sub>1</sub>- and µ-ORs reduces pro-inflammatory cytokine production by leukocytes and suppresses inflammatory injury to the heart and other organs.</p>","PeriodicalId":15061,"journal":{"name":"Journal of Biomedical Research","volume":" ","pages":"1-15"},"PeriodicalIF":2.4,"publicationDate":"2025-10-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145452028","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The crosstalk between autophagy and ferroptosis in pulmonary fibrosis. 肺纤维化中自噬与铁下垂之间的串扰。
IF 2.4 4区 医学 Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-10-25 DOI: 10.7555/JBR.39.20250243
Rongzhu Liu, Dongnan Zheng, Fengxu Wang, Mengna Jiang, Rui Zhao, Shan Bao, Xinyuan Zhao, Demin Cheng

Pulmonary fibrosis (PF) is a progressive lung disorder characterized by excessive deposition of extracellular matrix (ECM) in the alveoli, with irreversible fibrotic remodeling and destruction of alveolar structures. Clinically, PF is manifested by progressive dyspnea and a decline in lung function. These manifestations contribute to a poor prognosis and significantly diminish the quality of life of affected individuals. Current therapeutic options for PF remain limited, highlighting the urgent need to elucidate its molecular mechanisms in order to develop novel treatment strategies. Recent studies have revealed that autophagy and ferroptosis, two critical cell death pathways, engage in intricate crosstalk mechanisms that regulate the pathogenesis of PF. Autophagy maintains cellular homeostasis by mediating lysosome-dependent degradation, whereas ferroptosis is characterized by iron-dependent lipid peroxidation. The interplay between autophagy and ferroptosis plays a pivotal role in modulating fibrosis progression. However, the mechanistic interactions between autophagy and ferroptosis in PF remain poorly understood, particularly regarding their bidirectional crosstalk and their unique role in PF progression. This review aims to systematically synthesize the current understanding of autophagy-ferroptosis interactions in PF, thereby identifying potential therapeutic strategies and drug targets for PF treatment.

肺纤维化(PF)是一种进行性肺部疾病,其特征是肺泡内细胞外基质(ECM)过度沉积,伴有不可逆的纤维化重塑和肺泡结构破坏。临床表现为进行性呼吸困难和肺功能下降。这些表现导致预后不良,并显著降低患者的生活质量。目前对PF的治疗选择仍然有限,强调迫切需要阐明其分子机制,以制定新的治疗策略。最近的研究表明,自噬和铁凋亡是两种关键的细胞死亡途径,它们参与了复杂的串串机制,调节了PF的发病机制。自噬通过介导溶酶体依赖性降解来维持细胞稳态,而铁凋亡则以铁依赖性脂质过氧化为特征。自噬和铁下垂之间的相互作用在调节纤维化进程中起着关键作用。然而,自噬和铁下垂之间的机制相互作用仍然知之甚少,特别是关于它们的双向串扰和它们在PF进展中的独特作用。本综述旨在系统地综合目前对PF中自噬-铁凋亡相互作用的理解,从而确定PF治疗的潜在治疗策略和药物靶点。
{"title":"The crosstalk between autophagy and ferroptosis in pulmonary fibrosis.","authors":"Rongzhu Liu, Dongnan Zheng, Fengxu Wang, Mengna Jiang, Rui Zhao, Shan Bao, Xinyuan Zhao, Demin Cheng","doi":"10.7555/JBR.39.20250243","DOIUrl":"https://doi.org/10.7555/JBR.39.20250243","url":null,"abstract":"<p><p>Pulmonary fibrosis (PF) is a progressive lung disorder characterized by excessive deposition of extracellular matrix (ECM) in the alveoli, with irreversible fibrotic remodeling and destruction of alveolar structures. Clinically, PF is manifested by progressive dyspnea and a decline in lung function. These manifestations contribute to a poor prognosis and significantly diminish the quality of life of affected individuals. Current therapeutic options for PF remain limited, highlighting the urgent need to elucidate its molecular mechanisms in order to develop novel treatment strategies. Recent studies have revealed that autophagy and ferroptosis, two critical cell death pathways, engage in intricate crosstalk mechanisms that regulate the pathogenesis of PF. Autophagy maintains cellular homeostasis by mediating lysosome-dependent degradation, whereas ferroptosis is characterized by iron-dependent lipid peroxidation. The interplay between autophagy and ferroptosis plays a pivotal role in modulating fibrosis progression. However, the mechanistic interactions between autophagy and ferroptosis in PF remain poorly understood, particularly regarding their bidirectional crosstalk and their unique role in PF progression. This review aims to systematically synthesize the current understanding of autophagy-ferroptosis interactions in PF, thereby identifying potential therapeutic strategies and drug targets for PF treatment.</p>","PeriodicalId":15061,"journal":{"name":"Journal of Biomedical Research","volume":" ","pages":"1-17"},"PeriodicalIF":2.4,"publicationDate":"2025-10-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145345440","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Editorial commentary on the special issue of cancer research. 关于癌症研究特刊的社论评论。
IF 2.4 4区 医学 Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-09-25 DOI: 10.7555/JBR.39.20250800
{"title":"Editorial commentary on the special issue of cancer research.","authors":"","doi":"10.7555/JBR.39.20250800","DOIUrl":"10.7555/JBR.39.20250800","url":null,"abstract":"","PeriodicalId":15061,"journal":{"name":"Journal of Biomedical Research","volume":"39 5","pages":"439-440"},"PeriodicalIF":2.4,"publicationDate":"2025-09-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12481670/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145191584","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Where do I submit my next paper? A practical guide for biomedical researchers. 我的下一篇论文在哪里提交?生物医学研究人员的实用指南。
IF 2.4 4区 医学 Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-09-04 DOI: 10.7555/JBR.39.20250147
Mohammad S Alrashdan
{"title":"Where do I submit my next paper? A practical guide for biomedical researchers.","authors":"Mohammad S Alrashdan","doi":"10.7555/JBR.39.20250147","DOIUrl":"https://doi.org/10.7555/JBR.39.20250147","url":null,"abstract":"","PeriodicalId":15061,"journal":{"name":"Journal of Biomedical Research","volume":" ","pages":"1-5"},"PeriodicalIF":2.4,"publicationDate":"2025-09-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145033230","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
STK11 rs12977689 C>A gene polymorphism as a risk factor for coronary artery disease in type 2 diabetes patients. STK11 rs12977689 C>A基因多态性与2型糖尿病患者冠状动脉疾病的危险因素
IF 2.4 4区 医学 Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-09-04 DOI: 10.7555/JBR.39.20250136
Made Edwin Sridana, Wira Gotera, Bagus Ari, Pradnyana Dwi, Bagus Ari Pradnyana Dwi Sutanagera, Made Ratna Saraswati
{"title":"<i>STK11</i> rs12977689 C>A gene polymorphism as a risk factor for coronary artery disease in type 2 diabetes patients.","authors":"Made Edwin Sridana, Wira Gotera, Bagus Ari, Pradnyana Dwi, Bagus Ari Pradnyana Dwi Sutanagera, Made Ratna Saraswati","doi":"10.7555/JBR.39.20250136","DOIUrl":"https://doi.org/10.7555/JBR.39.20250136","url":null,"abstract":"","PeriodicalId":15061,"journal":{"name":"Journal of Biomedical Research","volume":" ","pages":"1-5"},"PeriodicalIF":2.4,"publicationDate":"2025-09-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145033156","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Stratified profiling of azoospermia: Differentiating histological subtypes with seminal plasma metabolic signatures. 无精子症的分层分析:用精浆代谢特征区分组织学亚型。
IF 2.4 4区 医学 Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-09-04 DOI: 10.7555/JBR.39.20250294
Jiachen Wang, Tianyi Song, Hongqi Fan, Mengyuan Zhu, Ying Yao, Laihua Li, Mingxi Liu, MinJian Chen, Jiahao Sha, Xiaoyu Yang, Yan Yuan

Non-obstructive azoospermia (NOA), characterized by impaired spermatogenesis and the complete absence of sperm in the ejaculate, represents one of the most severe forms of male infertility. Current diagnostic strategies rely on invasive procedures such as testicular sperm extraction, underscoring the urgent need for reliable, non-invasive alternatives. In the present study, we performed untargeted metabolomic profiling of human seminal plasma to identify biomarker panels capable of stratifying azoospermia subtypes through a stepwise approach. We identified distinct metabolite biomarker panels comparing NOA vs. obstructive azoospermia (OA), Sertoli cell-only syndrome vs. other NOA subtypes, and hypospermatogenesis vs. maturation arrest. Additionally, cross-species comparative analysis with high-resolution metabolomic data from purified mouse testicular cell populations implicated these biomarkers in specific germ cell stages and metabolic transitions during spermatogenesis. These findings establish a molecular framework for the non-invasive classification of azoospermia subtypes and provide novel insights into the metabolic disruptions underlying male infertility.

非阻塞性无精子症(NOA)以精子发生受损和射精中完全没有精子为特征,是男性不育最严重的形式之一。目前的诊断策略依赖于侵入性手术,如睾丸精子提取,这强调了对可靠、非侵入性替代方法的迫切需要。在本研究中,我们对人类精浆进行了非靶向代谢组学分析,通过逐步方法鉴定能够对无精子症亚型进行分层的生物标志物。我们确定了不同的代谢物生物标志物组,比较NOA与阻塞性无精子症(OA),仅支持细胞综合征与其他NOA亚型,以及精子发生不足与成熟停滞。此外,来自纯化小鼠睾丸细胞群的高分辨率代谢组学数据的跨物种比较分析表明,这些生物标志物与精子发生过程中特定的生殖细胞阶段和代谢转变有关。这些发现为无精子症亚型的无创分类建立了分子框架,并为男性不育的代谢紊乱提供了新的见解。
{"title":"Stratified profiling of azoospermia: Differentiating histological subtypes with seminal plasma metabolic signatures.","authors":"Jiachen Wang, Tianyi Song, Hongqi Fan, Mengyuan Zhu, Ying Yao, Laihua Li, Mingxi Liu, MinJian Chen, Jiahao Sha, Xiaoyu Yang, Yan Yuan","doi":"10.7555/JBR.39.20250294","DOIUrl":"https://doi.org/10.7555/JBR.39.20250294","url":null,"abstract":"<p><p>Non-obstructive azoospermia (NOA), characterized by impaired spermatogenesis and the complete absence of sperm in the ejaculate, represents one of the most severe forms of male infertility. Current diagnostic strategies rely on invasive procedures such as testicular sperm extraction, underscoring the urgent need for reliable, non-invasive alternatives. In the present study, we performed untargeted metabolomic profiling of human seminal plasma to identify biomarker panels capable of stratifying azoospermia subtypes through a stepwise approach. We identified distinct metabolite biomarker panels comparing NOA <i>vs.</i> obstructive azoospermia (OA), Sertoli cell-only syndrome <i>vs.</i> other NOA subtypes, and hypospermatogenesis <i>vs.</i> maturation arrest. Additionally, cross-species comparative analysis with high-resolution metabolomic data from purified mouse testicular cell populations implicated these biomarkers in specific germ cell stages and metabolic transitions during spermatogenesis. These findings establish a molecular framework for the non-invasive classification of azoospermia subtypes and provide novel insights into the metabolic disruptions underlying male infertility.</p>","PeriodicalId":15061,"journal":{"name":"Journal of Biomedical Research","volume":" ","pages":"1-11"},"PeriodicalIF":2.4,"publicationDate":"2025-09-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145033259","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The mediating effect of blood pressure between healthy lifestyles and stroke: Results from the China Kadoorie Biobank study. 血压在健康生活方式和中风之间的中介作用:来自中国嘉道理生物银行的研究结果。
IF 2.4 4区 医学 Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-08-29 DOI: 10.7555/JBR.39.20250177
Zidong Wang, Jiaxi Zhou, Xikang Fan, Jian Su, Houyue Geng, Xun Wu, Yujie Hua, Hongfu Ren, Jun Lyu, Pei Pei, Canqing Yu, Dianjianyi Sun, Yan Lu, Jinyi Zhou, Ran Tao

While a healthy lifestyle is known to reduce the risk of stroke, the extent to which blood pressure (BP) mediates this association remains unclear. The present study aimed to quantify the mediating role of BP in the association between combined lifestyle factors and stroke incidence. Using data from 51929 participants free of major cardiovascular diseases or cancer at baseline, we employed structural equation modeling to assess the mediating effects of systolic (SBP) and diastolic (DBP) blood pressure. During the follow-up, 2811 incident stroke cases were identified. A healthy lifestyle was significantly associated with a reduced risk of stroke, with SBP mediating 44.70% ( β = -0.0014, 95% confidence interval [CI]: -0.0016 to -0.0012) and DBP mediating 37.81% ( β = -0.0012, 95% CI: -0.0015 to -0.0009) of this association. The mediating effects were attenuated but remained significant for ischemic stroke (SBP: 33.21%; DBP: 27.24%). In conclusion, approximately two-fifths of the protective association between a healthy lifestyle and stroke may be mediated by BP. These findings suggest that BP control may serve as an important early indicator for evaluating the effectiveness of lifestyle interventions in reducing stroke risk.

虽然健康的生活方式可以降低中风风险,但血压在多大程度上介导这种关联仍不清楚。本研究旨在量化血压在综合生活方式因素与脑卒中发生率之间的中介作用。使用51929名无主要心血管疾病或癌症的参与者的数据,我们采用结构方程模型来评估收缩压(SBP)和舒张压(DBP)的中介作用。在随访期间,确定了2811例突发中风病例。健康的生活方式与卒中风险降低显著相关,收缩压介导44.70% (β = - 0.0014, 95%可信区间[CI]: - 0.0016至- 0.0012),舒张压介导37.81% (β = - 0.0012, 95% CI: - 0.0015至- 0.0009)。缺血性脑卒中的介导作用减弱,但仍具有显著性(收缩压:33.21%;舒张压:27.24%)。总之,大约五分之二的健康生活方式与中风之间的保护性关联可能是由血压介导的。这些发现表明,血压控制可以作为评估生活方式干预在降低卒中风险方面有效性的重要早期指标。
{"title":"The mediating effect of blood pressure between healthy lifestyles and stroke: Results from the China Kadoorie Biobank study.","authors":"Zidong Wang, Jiaxi Zhou, Xikang Fan, Jian Su, Houyue Geng, Xun Wu, Yujie Hua, Hongfu Ren, Jun Lyu, Pei Pei, Canqing Yu, Dianjianyi Sun, Yan Lu, Jinyi Zhou, Ran Tao","doi":"10.7555/JBR.39.20250177","DOIUrl":"10.7555/JBR.39.20250177","url":null,"abstract":"<p><p>While a healthy lifestyle is known to reduce the risk of stroke, the extent to which blood pressure (BP) mediates this association remains unclear. The present study aimed to quantify the mediating role of BP in the association between combined lifestyle factors and stroke incidence. Using data from 51929 participants free of major cardiovascular diseases or cancer at baseline, we employed structural equation modeling to assess the mediating effects of systolic (SBP) and diastolic (DBP) blood pressure. During the follow-up, 2811 incident stroke cases were identified. A healthy lifestyle was significantly associated with a reduced risk of stroke, with SBP mediating 44.70% ( <i>β</i> = -0.0014, 95% confidence interval [CI]: -0.0016 to -0.0012) and DBP mediating 37.81% ( <i>β</i> = -0.0012, 95% CI: -0.0015 to -0.0009) of this association. The mediating effects were attenuated but remained significant for ischemic stroke (SBP: 33.21%; DBP: 27.24%). In conclusion, approximately two-fifths of the protective association between a healthy lifestyle and stroke may be mediated by BP. These findings suggest that BP control may serve as an important early indicator for evaluating the effectiveness of lifestyle interventions in reducing stroke risk.</p>","PeriodicalId":15061,"journal":{"name":"Journal of Biomedical Research","volume":" ","pages":"23-31"},"PeriodicalIF":2.4,"publicationDate":"2025-08-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12799335/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144955261","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Journal of Biomedical Research
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1