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High expression of GPR50 promotes the proliferation, migration and autophagy of hepatocellular carcinoma cells in vitro. 高表达 GPR50 可促进体外肝癌细胞的增殖、迁移和自噬。
IF 4.1 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2023-12-01 Epub Date: 2023-06-28 DOI: 10.1007/s12079-023-00772-9
Weiming Zhao, Lingling Xi, Guoying Yu, Gaiping Wang, Cuifang Chang

G protein-coupled receptors (GPCRs) play important roles in tumorigenesis and the development of hepatocellular carcinoma (HCC). GPR50 is an orphan GPCR. Previous studies have indicated that GPR50 could protect against breast cancer development and decrease tumor growth in a xenograft mouse model. However, its role in HCC remains indistinct. To detect the role and the regulation mechanism of GPR50 in HCC, GPR50 expression was analyzed in HCC patients (gene expression omnibus database (GEO) (GSE45436)) and detected in HCC cell line CBRH-7919, and the results showed that GPR50 was significantly up-regulated in HCC patients and CBRH-7919 cell line compared to the corresponding normal control. Gpr50 cDNA was transfected into HCC cell line CBRH-7919, and we found that Gpr50 promoted the proliferation, migration, and autophagy of CBRH-7919. The regulation mechanism of GPR50 in HCC was detected by isobaric tags for relative and absolute quantification (iTRAQ) analysis, and we found that GPR50 promoted HCC was closely related to CCT6A and PGK1. Taken together, GPR50 may promote HCC progression via CCT6A-induced proliferation and PGK1-induced migration and autophagy, and GPR50 could be an important target for HCC.

G 蛋白偶联受体(GPCR)在肿瘤发生和肝细胞癌(HCC)发展过程中发挥着重要作用。GPR50 是一种孤儿 GPCR。以前的研究表明,GPR50 可以防止乳腺癌的发展,并在异种移植小鼠模型中减少肿瘤的生长。然而,它在 HCC 中的作用仍不明确。为了检测GPR50在HCC中的作用和调控机制,研究人员分析了GPR50在HCC患者中的表达(基因表达总括数据库(GEO)(GSE45436)),并检测了HCC细胞株CBRH-7919中的表达,结果表明与相应的正常对照相比,GPR50在HCC患者和CBRH-7919细胞株中显著上调。将Gpr50 cDNA转染到HCC细胞株CBRH-7919中,我们发现Gpr50能促进CBRH-7919的增殖、迁移和自噬。通过同位素标签相对和绝对定量(iTRAQ)分析检测了GPR50在HCC中的调控机制,发现GPR50对HCC的促进作用与CCT6A和PGK1密切相关。综上所述,GPR50可能通过CCT6A诱导的增殖和PGK1诱导的迁移和自噬促进HCC的进展,GPR50可能是HCC的一个重要靶点。
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引用次数: 0
Knockdown of Yap attenuates TAA-induced hepatic fibrosis by interaction with hedgehog signals. 通过与刺猬信号相互作用,敲除 Yap 可减轻 TAA 诱导的肝纤维化。
IF 4.1 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2023-12-01 Epub Date: 2023-06-20 DOI: 10.1007/s12079-023-00775-6
Ye Zhao, Huiling Wang, Tianhua He, Bo Ma, Guoguang Chen, Chimeng Tzeng

Liver fibrosis is an aberrant wound healing response to tissue injury characterized by excessive extracellular matrix deposition and loss of normal liver architecture. Hepatic stellate cells (HSCs) activation is regards to be the major process in liver fibrogenesis which is dynamic and reversible. Both Hippo signaling core factor Yap and Hedgehog (Hh) signaling promote HSCs transdifferentiation thereby regulating the repair process of liver injury. However, the molecular function of YAP and the regulation between Yap and Hh during fibrogenesis remain uncertain. In this study, the essential roles of Yap in liver fibrosis were investigated. Yap was detected to be increased in liver fibrotic tissue by the thioacetamide (TAA)-induced zebrafish embryonic and adult models. Inhibition of Yap by both embryonic morpholino interference and adult's inhibitor treatment was proved to alleviate TAA-induced liver lesions by and histology and gene expression examination. Transcriptomic analysis and gene expression detection showed that Yap and Hh signaling pathway have a cross talking upon TAA-induced liver fibrosis. In addition, TAA induction promoted the nuclear colocalization of YAP and Hh signaling factor GLI2α. This study demonstrates that Yap and Hh play synergistic protective roles in liver fibrotic response and provides new theoretical insight concerning the mechanisms of fibrosis progression.

肝纤维化是对组织损伤的一种异常伤口愈合反应,其特点是细胞外基质过度沉积和正常肝脏结构丧失。肝星状细胞(HSCs)活化被认为是肝纤维化的主要过程,而肝纤维化是动态和可逆的。Hippo信号转导核心因子Yap和Hedgehog(Hh)信号转导都能促进造血干细胞的转分化,从而调节肝损伤的修复过程。然而,YAP的分子功能以及Yap和Hh在纤维化过程中的调控作用仍不确定。本研究探讨了Yap在肝纤维化中的重要作用。硫代乙酰胺(TAA)诱导的斑马鱼胚胎和成鱼模型检测到肝纤维化组织中的Yap增加。通过组织学和基因表达检测,证明通过胚胎吗啉干扰和成鱼抑制剂处理抑制Yap可减轻TAA诱导的肝脏病变。转录组分析和基因表达检测表明,Yap和Hh信号通路在TAA诱导的肝纤维化过程中存在交叉对话。此外,TAA诱导促进了YAP和Hh信号因子GLI2α的核共定位。该研究表明,Yap和Hh在肝纤维化反应中发挥协同保护作用,并为肝纤维化进展机制提供了新的理论依据。
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引用次数: 1
Insights into the mediation of Ca2+ signaling in the promoting effects of LETX-VI on the synthesis and release of dopamine. 洞察 Ca2+ 信号在 LETX-VI 对多巴胺合成和释放的促进作用中的中介作用。
IF 4.1 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2023-12-01 Epub Date: 2023-09-13 DOI: 10.1007/s12079-023-00783-6
Zhixiang Lei, Haiyan Wang, Yiwen Zhai, Minglu Sun, Si Chen, Panfeng Yin, Xianchun Wang

Latroeggtoxin-VI (LETX-VI) is an active protein and was previously demonstrated to have effects on the synthesis and release of dopamine. Hererin, the involvement of Ca2+ signaling in the effects of LETX-VI on dopamine was systematically investigated, using PC12 cells as a neuron model. LETX-VI was shown to promote dopamine release from PC12 cells both in the presence and absence of extracellular Ca2+; however the presence of extracellular Ca2+ was favorable for enhancing the promoting effects of LETX-VI on dopamine, because LETX-VI facilitated the influx of extracellular Ca2+ through the L-type calcium channels in plasma membrane (PM) to increase cytosolic Ca2+ concentration. LETX-VI was able to penetrate the PM of PC12 cells to act on the Ca2+ channel proteins IP3Rs and RyRs in the endoplasm reticulum (ER) membrane, opening the Ca2+ channels and promoting the release of ER Ca2+ to elevate cytosolic Ca2+ level. With the help of intracellular Ca2+ chelator BAPTA, the elevated cytosolic Ca2+ level was proven to play crucial role for the enhanced promoting effects of LETX-VI on dopamine. Taken together, LETX-VI is able to open the Ca2+ channels in both PM and ER membrane simultaneously to facilitate extracellular Ca2+ influx and ER Ca2+ release, and thus increases the cytosolic Ca2+ concentration to enhance the promoting effects on the synthesis and release of dopamine.

Latroeggtoxin-VI(LETX-VI)是一种活性蛋白,以前曾被证实对多巴胺的合成和释放有影响。本研究以 PC12 细胞为神经元模型,系统地研究了 Ca2+ 信号在 LETX-VI 对多巴胺的影响中的参与作用。研究表明,LETX-VI 在细胞外 Ca2+ 存在和不存在的情况下都能促进 PC12 细胞释放多巴胺;但细胞外 Ca2+ 的存在有利于增强 LETX-VI 对多巴胺的促进作用,因为 LETX-VI 能促进细胞外 Ca2+ 通过质膜(PM)上的 L 型钙通道流入,从而增加细胞膜 Ca2+ 浓度。LETX-VI 能够穿透 PC12 细胞的质膜,作用于内质网(ER)膜上的 Ca2+ 通道蛋白 IP3Rs 和 RyRs,打开 Ca2+ 通道,促进 ER Ca2+ 释放,从而提高细胞膜 Ca2+ 浓度。在细胞内 Ca2+ 螯合剂 BAPTA 的帮助下,细胞膜 Ca2+ 水平的升高被证明是 LETX-VI 增强促进多巴胺作用的关键因素。综上所述,LETX-VI 能够同时打开 PM 和 ER 膜上的 Ca2+ 通道,促进细胞外 Ca2+ 的流入和 ER Ca2+ 的释放,从而提高细胞膜 Ca2+ 浓度,增强对多巴胺合成和释放的促进作用。
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引用次数: 0
Tripartite motif-containing 9 promoted proliferation and migration of bladder cancer cells through CEACAM6-Smad2/3 axis. 含三方基序的 9 通过 CEACAM6-Smad2/3 轴促进膀胱癌细胞的增殖和迁移。
IF 4.1 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2023-12-01 Epub Date: 2023-05-30 DOI: 10.1007/s12079-023-00766-7
Zhao-Cun Zhang, Hai-Feng Zhao, Zhuang Sun, Yi Li, Ming-Lei Zhong, Bao-Hai Wang, Xian-Zhou Jiang

Studies have shown that tripartite motif-containing (TRIM) family proteins function as E3 ubiquitin ligases and play essential roles in cancer biology. In the present study, we validated a contribution of TRIM9 to bladder cancer progression. 296 patients derived from The Cancer Genome Atlas (TCGA) database and 22 clinical specimens were included, in which accumulated TRIM9 correlated with the poor prognosis and higher relapse in bladder patients. In vitro, TRIM9 promoted bladder cancer cells Biu-87 and T24 cell proliferation and migration. Meanwhile, overexpression of TRIM9 reduced the chemosensitivity in Biu-87 and T24 to mitomycin C (MMC) and gemcitabine (GEM). As an underlying mechanism, we found that TRIM9 stimulated carcinoembryonic antigen 6 (CEACAM6) upregulation, which further facilitated Smad2/3-matrix metalloproteinase 2 (MMP2) signaling activation both in vitro and in vivo. Those results indicated that TRIM9 facilitated bladder cancer development and chemoresistance by CEACAM6-Smad2/3 axis. TRIM9 and its associated molecules could be a potential diagnostic indicator and therapeutic target in bladder cancer.

研究表明,含三方基序(TRIM)家族蛋白具有 E3 泛素连接酶的功能,在癌症生物学中发挥着重要作用。在本研究中,我们验证了 TRIM9 对膀胱癌进展的贡献。研究纳入了来自癌症基因组图谱(TCGA)数据库的296名患者和22份临床标本,其中累积的TRIM9与膀胱癌患者的不良预后和高复发率相关。在体外,TRIM9能促进膀胱癌细胞Biu-87和T24的增殖和迁移。同时,TRIM9的过表达降低了Biu-87和T24对丝裂霉素C(MMC)和吉西他滨(GEM)的化疗敏感性。作为潜在机制,我们发现TRIM9刺激癌胚抗原6(CEACAM6)上调,这进一步促进了体外和体内Smad2/3-基质金属蛋白酶2(MMP2)信号的激活。这些结果表明,TRIM9通过CEACAM6-Smad2/3轴促进了膀胱癌的发展和化疗耐药性。TRIM9及其相关分子可能是膀胱癌的潜在诊断指标和治疗靶点。
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引用次数: 1
Metformin combined with rapamycin ameliorates podocyte injury in idiopathic membranous nephropathy through the AMPK/mTOR signaling pathway. 二甲双胍联合雷帕霉素可通过AMPK/mTOR信号通路改善特发性膜性肾病的荚膜损伤。
IF 4.1 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2023-12-01 Epub Date: 2023-09-13 DOI: 10.1007/s12079-023-00781-8
Meichen Ma, Yue Pan, Yue Zhang, Mei Yang, Ying Xi, Baoxu Lin, Wudi Hao, Jianhua Liu, Lina Wu, Yong Liu, Xiaosong Qin

Autophagy activation protects against podocyte injury in idiopathic membranous nephropathy (IMN). The AMPK/mTOR signaling pathway is a vital autophagy regulatory pathway. Metformin promotes autophagy, whereas rapamycin is an autophagy agonist. However, the therapeutic mechanisms of metformin and rapamycin in IMN remain unclear. Thus, we examined the mechanisms of action of metformin and rapamycin in IMN by regulating the AMPK/mTOR autophagy signaling pathway. Female Sprague-Dawley (SD) rats were treated with cationic bovine serum albumin (C-BSA) to establish an IMN model and were randomly divided into IMN model, metformin, rapamycin, and metformin + rapamycin groups. A control group was also established. Metformin and rapamycin were used as treatments. Renal histological changes, urinary protein excretion, the protein expression levels of key AMPK/mTOR signaling pathway proteins, renal tissue cell apoptosis, and autophagy-associated proteins (Beclin 1 and LC3) were examined. In addition, a C5b-9 sublysis model using the MPC-5 mouse podocyte cell line was established to verify the effect of metformin combined with rapamycin on podocytes. Metformin combined with rapamycin improved urinary protein excretion in IMN rats. Metformin combined with rapamycin attenuated the inflammatory response, renal fibrosis, and podocyte foot process fusion. In addition, it improved autophagy in podocytes as demonstrated by the enhanced expression of Beclin-1, p-AMPK/AMPK, LC3-II/I, and autophagosomes in podocytes and decreased p-mTOR/mTOR expression. In conclusion, metformin combined with rapamycin decreased proteinuria, improved renal fibrosis and podocyte autophagy via AMPK/mTOR pathway in IMN rats. The metformin and rapamycin decreased proteinuria and inproved renal fibrosis in IMN model rats.

自噬激活可保护特发性膜性肾病(IMN)中的荚膜细胞免受损伤。AMPK/mTOR信号通路是一条重要的自噬调节通路。二甲双胍能促进自噬,而雷帕霉素是一种自噬激动剂。然而,二甲双胍和雷帕霉素对 IMN 的治疗机制仍不清楚。因此,我们研究了二甲双胍和雷帕霉素通过调节 AMPK/mTOR 自噬信号通路对 IMN 的作用机制。用阳离子牛血清白蛋白(C-BSA)处理雌性斯普拉格-道利(SD)大鼠以建立IMN模型,并将其随机分为IMN模型组、二甲双胍组、雷帕霉素组和二甲双胍+雷帕霉素组。同时还设立了对照组。治疗方法为二甲双胍和雷帕霉素。研究人员检测了肾组织学变化、尿蛋白排泄、AMPK/mTOR 信号通路关键蛋白的表达水平、肾组织细胞凋亡和自噬相关蛋白(Beclin 1 和 LC3)。此外,为了验证二甲双胍联合雷帕霉素对荚膜细胞的影响,还利用 MPC-5 小鼠荚膜细胞系建立了 C5b-9 亚解模型。二甲双胍联合雷帕霉素可改善 IMN 大鼠的尿蛋白排泄。二甲双胍联合雷帕霉素可减轻炎症反应、肾脏纤维化和荚膜脚进程融合。此外,二甲双胍还能改善荚膜细胞的自噬,表现为荚膜细胞中 Beclin-1、p-AMPK/AMPK、LC3-II/I 和自噬体的表达增强,p-mTOR/mTOR 的表达降低。总之,二甲双胍联合雷帕霉素可降低 IMN 大鼠的蛋白尿,通过 AMPK/mTOR 通路改善肾脏纤维化和荚膜细胞自噬。二甲双胍联合雷帕霉素可降低IMN模型大鼠的蛋白尿,改善肾脏纤维化。
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引用次数: 0
Potential roles of lncRNA MALAT1-miRNA interactions in ocular diseases. lncRNA-MALAT1-miRNA相互作用在眼部疾病中的潜在作用。
IF 4.1 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2023-12-01 Epub Date: 2023-10-23 DOI: 10.1007/s12079-023-00787-2
Ava Nasrolahi, Fatemeh Khojasteh Pour, Abdolah Mousavi Salehi, Bartosz Kempisty, Maryam Hajizadeh, Mostafa Feghhi, Shirin Azizidoost, Maryam Farzaneh

Long non-coding RNAs (lncRNAs) are non-protein coding transcripts that are longer than 200 nucleotides in length. LncRNAs are implicated in gene expression at the transcriptional, translational, and epigenetic levels, and thereby impact different cellular processes including cell proliferation, migration, apoptosis, angiogenesis, and immune response. In recent years, numerous studies have demonstrated the significant contribution of lncRNAs to the pathogenesis and progression of various diseases, such as stroke, heart disease, and cancer. Further investigations have shown that lncRNAs have altered expression patterns in ocular tissues and cell lines during pathological conditions. The pathogenesis of various ocular diseases, including glaucoma, cataract, corneal diseases, proliferative vitreoretinopathy, diabetic retinopathy, and retinoblastoma, is influenced by the involvement of specific lncRNAs which play a critical role in the development and progression of these diseases. Metastasis-associated lung adenocarcinoma transcript 1 (MALAT1) is a well-researched lncRNA in the context of ocular diseases, which has been shown to exert its biological effects through several signaling pathways and downstream targets. The present review provides a comprehensive summary of the molecular mechanisms underlying the biological functions and roles of MALAT1 in ocular diseases.

长非编码RNA(lncRNA)是长度超过200个核苷酸的非蛋白质编码转录物。lncRNA在转录、翻译和表观遗传学水平上参与基因表达,从而影响不同的细胞过程,包括细胞增殖、迁移、凋亡、血管生成和免疫反应。近年来,大量研究表明lncRNA对各种疾病的发病机制和进展有重要贡献,如中风、心脏病和癌症。进一步的研究表明,lncRNA在病理条件下改变了眼组织和细胞系的表达模式。各种眼部疾病的发病机制,包括青光眼、白内障、角膜疾病、增殖性玻璃体视网膜病变、糖尿病视网膜病变和视网膜母细胞瘤,都受到特定lncRNA的影响,这些lncRNA在这些疾病的发展和进展中起着关键作用。转移相关肺腺癌转录物1(MALAT1)是一种在眼部疾病中得到充分研究的lncRNA,已被证明通过几种信号通路和下游靶点发挥其生物学作用。本文综述了MALAT1在眼部疾病中的生物学功能和作用的分子机制。
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引用次数: 0
Role of EGFR and FASN in breast cancer progression. 表皮生长因子受体和 FASN 在乳腺癌进展中的作用。
IF 4.1 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2023-12-01 Epub Date: 2023-07-25 DOI: 10.1007/s12079-023-00771-w
Suchi Chaturvedi, Mainak Biswas, Sushabhan Sadhukhan, Avinash Sonawane

Breast cancer (BC) emerged as one of the life-threatening diseases among females. Despite notable improvements made in cancer detection and treatment worldwide, according to GLOBACAN 2020, BC is the fifth leading cancer, with an estimated 1 in 6 cancer deaths, in a majority of countries. However, the exact cause that leads to BC progression still needs to be determined. Here, we reviewed the role of two novel biomarkers responsible for 50-70% of BC progression. The first one is epidermal growth factor receptor (EGFR) which belongs to the ErbB tyrosine kinases family, signalling pathways associated with it play a significant role in regulating cell proliferation and division. Another one is fatty acid synthase (FASN), a key enzyme responsible for the de novo lipid synthesis required for cancer cell development. This review presents a rationale for the EGFR-mediated pathways, their interaction with FASN, communion of these two biomarkers with BC, and improvements to overcome drug resistance caused by them.

乳腺癌(BC)是威胁女性生命的疾病之一。尽管全球在癌症检测和治疗方面取得了显著进步,但根据 GLOBACAN 2020 的数据,在大多数国家,乳腺癌仍是第五大主要癌症,估计每 6 人中就有 1 人死于乳腺癌。然而,导致 BC 进展的确切原因仍有待确定。在此,我们回顾了两种新型生物标志物的作用,这两种生物标志物导致了50-70%的BC进展。第一个是表皮生长因子受体(EGFR),它属于ErbB酪氨酸激酶家族,与之相关的信号通路在调节细胞增殖和分裂方面发挥着重要作用。另一种是脂肪酸合成酶(FASN),它是癌细胞发育所需的一种负责新脂质合成的关键酶。这篇综述介绍了表皮生长因子受体介导的途径、它们与 FASN 的相互作用、这两种生物标志物与 BC 的关系,以及克服由它们引起的耐药性的方法。
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引用次数: 1
PKCι induces differential phosphorylation of STAT3 to modify STAT3-related signaling pathways in pancreatic cancer cells. PKCι 可诱导 STAT3 发生不同程度的磷酸化,从而改变胰腺癌细胞中与 STAT3 相关的信号通路。
IF 3.6 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2023-12-01 Epub Date: 2023-08-07 DOI: 10.1007/s12079-023-00780-9
Junli Wang, Sijia Weng, Yue Zhu, Hongmei Chen, Jueyu Pan, Shuoyu Qiu, Yufeng Liu, Dapeng Wei, Tongbo Zhu

An increasing number of studies have documented atypical protein kinase C isoform ι (PKCι) as an oncoprotein playing multifaceted roles in pancreatic carcinogenesis, including sustaining the transformed growth, prohibiting apoptosis, strengthening invasiveness, facilitating autophagy, as well as promoting the immunosuppressive tumor microenvironment of pancreatic tumors. In this study, we present novel evidence that PKCι overexpression increases STAT3 phosphorylation at the Y705 residue while decreasing STAT3 phosphorylation at the S727 residue in pancreatic cancer cells. We further demonstrate that STAT3 phosphorylation at Y705 and S727 residues is mutually antagonistic, and that STAT3 Y705 phosphorylation is positively related to the transcriptional activity of STAT3 in pancreatic cancer cells. Furthermore, we discover that PKCι inhibition attenuates STAT3 transcriptional activity via Y705 dephosphorylation, which appears to be resulted from enhanced phosphorylation of S727 in pancreatic cancer cells. Finally, we investigate and prove that by modulating the STAT3 activity, the PKCι inhibitor can synergistically enhance the antitumor effects of pharmacological STAT3 inhibitors or reverse the anti-apoptotic side effects incited by the MEK inhibitor, thereby posing as a prospective sensitizer in the treatment of pancreatic cancer cells.

越来越多的研究表明,非典型蛋白激酶C同工酶ι(PKCι)是一种肿瘤蛋白,在胰腺癌发生过程中发挥着多方面的作用,包括维持转化生长、抑制凋亡、增强侵袭性、促进自噬以及促进胰腺肿瘤的免疫抑制性肿瘤微环境。在这项研究中,我们提出了新的证据,证明在胰腺癌细胞中,PKCι 的过表达会增加 STAT3 在 Y705 残基上的磷酸化,同时降低 STAT3 在 S727 残基上的磷酸化。我们进一步证明,STAT3 在 Y705 和 S727 残基上的磷酸化是相互拮抗的,STAT3 Y705 磷酸化与 STAT3 在胰腺癌细胞中的转录活性呈正相关。此外,我们还发现 PKCι 抑制可通过 Y705 去磷酸化来减弱 STAT3 的转录活性,而这似乎是胰腺癌细胞中 S727 磷酸化增强的结果。最后,我们研究并证明,通过调节 STAT3 的活性,PKCι 抑制剂可以协同增强药理 STAT3 抑制剂的抗肿瘤效果,或逆转 MEK 抑制剂引发的抗凋亡副作用,从而成为治疗胰腺癌细胞的前瞻性增敏剂。
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引用次数: 0
The advance of CCN3 in fibrosis. CCN3在纤维化中的进展。
IF 4.1 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2023-12-01 Epub Date: 2023-06-28 DOI: 10.1007/s12079-023-00778-3
Hui Yin, Na Liu, Xianming Zhou, Jie Chen, Lihua Duan

The extracellular matrix (ECM) is comprised of various extracellular macromolecules, including collagen, enzymes, and glycoproteins, which offer structural and biochemical support to neighboring cells. After tissue injury, extracellular matrix proteins deposit in the damaged tissue to promote tissue healing. However, an imbalance between ECM production and degradation can result in excessive deposition, leading to fibrosis and subsequent organ dysfunction. Acting as a regulatory protein within the extracellular matrix, CCN3 plays a crucial role in numerous biological processes, such as cell proliferation, angiogenesis, tumorigenesis, and wound healing. Many studies have demonstrated that CCN3 can reduce the production of ECM in tissues through diverse mechanisms thereby exerting an inhibitory effect on fibrosis. Consequently, CCN3 emerges as a promising therapeutic target for ameliorating fibrosis.

细胞外基质(ECM)由各种胞外大分子组成,包括胶原蛋白、酶和糖蛋白,为邻近细胞提供结构和生化支持。组织受伤后,细胞外基质蛋白会沉积在受损组织中,促进组织愈合。然而,细胞外基质蛋白生成和降解之间的失衡会导致过度沉积,从而导致纤维化和随后的器官功能障碍。CCN3 作为细胞外基质中的调节蛋白,在细胞增殖、血管生成、肿瘤发生和伤口愈合等众多生物过程中发挥着至关重要的作用。许多研究表明,CCN3 可通过多种机制减少组织中 ECM 的生成,从而对纤维化产生抑制作用。因此,CCN3 成为改善纤维化的一个有前景的治疗靶点。
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引用次数: 1
Identification of ZMYND19 as a novel biomarker of colorectal cancer: RNA-sequencing and machine learning analysis. 将 ZMYND19 鉴定为结直肠癌的新型生物标记物:RNA测序和机器学习分析
IF 4.1 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2023-12-01 Epub Date: 2023-07-10 DOI: 10.1007/s12079-023-00779-2
Ghazaleh Khalili-Tanha, Reza Mohit, Alireza Asadnia, Majid Khazaei, Mohammad Dashtiahangar, Mina Maftooh, Mohammadreza Nassiri, Seyed Mahdi Hassanian, Majid Ghayour-Mobarhan, Mohammad Ali Kiani, Gordon A Ferns, Jyotsna Batra, Elham Nazari, Amir Avan

Colorectal cancer (CRC) is the third most common cause of cancer-related deaths. The five-year relative survival rate for CRC is estimated to be approximately 90% for patients diagnosed with early stages and 14% for those diagnosed at an advanced stages of disease, respectively. Hence, the development of accurate prognostic markers is required. Bioinformatics enables the identification of dysregulated pathways and novel biomarkers. RNA expression profiling was performed in CRC patients from the TCGA database using a Machine Learning approach to identify differential expression genes (DEGs). Survival curves were assessed using Kaplan-Meier analysis to identify prognostic biomarkers. Furthermore, the molecular pathways, protein-protein interaction, the co-expression of DEGs, and the correlation between DEGs and clinical data have been evaluated. The diagnostic markers were then determined based on machine learning analysis. The results indicated that key upregulated genes are associated with the RNA processing and heterocycle metabolic process, including C10orf2, NOP2, DKC1, BYSL, RRP12, PUS7, MTHFD1L, and PPAT. Furthermore, the survival analysis identified NOP58, OSBPL3, DNAJC2, and ZMYND19 as prognostic markers. The combineROC curve analysis indicated that the combination of C10orf2 -PPAT- ZMYND19 can be considered as diagnostic markers with sensitivity, specificity, and AUC values of 0.98, 1.00, and 0.99, respectively. Eventually, ZMYND19 gene was validated in CRC patients. In conclusion, novel biomarkers of CRC have been identified that may be a promising strategy for early diagnosis, potential treatment, and better prognosis.

结肠直肠癌(CRC)是癌症相关死亡的第三大常见原因。据估计,CRC 早期患者的五年相对生存率约为 90%,晚期患者的五年相对生存率约为 14%。因此,需要开发准确的预后标志物。生物信息学能够识别失调的通路和新型生物标志物。我们使用机器学习方法对 TCGA 数据库中的 CRC 患者进行了 RNA 表达谱分析,以确定差异表达基因(DEGs)。利用 Kaplan-Meier 分析评估了生存曲线,以确定预后生物标志物。此外,还评估了分子通路、蛋白-蛋白相互作用、DEGs 的共表达以及 DEGs 与临床数据之间的相关性。然后根据机器学习分析确定了诊断标志物。结果表明,关键的上调基因与 RNA 处理和杂环代谢过程有关,包括 C10orf2、NOP2、DKC1、BYSL、RRP12、PUS7、MTHFD1L 和 PPAT。此外,生存分析还发现 NOP58、OSBPL3、DNAJC2 和 ZMYND19 是预后标志物。联合ROC曲线分析表明,C10orf2 -PPAT- ZMYND19的组合可被视为诊断标志物,其灵敏度、特异性和AUC值分别为0.98、1.00和0.99。最终,ZMYND19 基因在 CRC 患者中得到了验证。总之,新发现的 CRC 生物标记物可能是早期诊断、潜在治疗和改善预后的有效策略。
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引用次数: 3
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Journal of Cell Communication and Signaling
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