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Chemoenzymatic synthesis of 6′-sialolactose-modified nanobody 6′-唾液乳糖修饰纳米体的化学酶合成
IF 1 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-01-01 DOI: 10.1080/07328303.2022.2055048
Min Jiang , Jie Zhao , Guodong Mei , Han Lin , Haofei Hong , Dan Li , Zhimeng Wu

6′-Sialolactose-modified mono- and bivalent nanobodies were designed and synthesized by a chemoenzymatic strategy. Epidermal growth factor receptor (EGFR)-targeting 7D12 nanobodies, including mono- and bivalent 7D12, were recombinantly expressed in Escherichia coli. Triglycine-modified 6′-sialolactose derivative was synthesized in nine steps. The conjugation of carbohydrates with nanobodies was achieved by Sortase-A mediated ligation with high conversion rates. The obtained glycoengineered nanobodies were finally verified by SDS-PAGE, western blot, and mass spectrometry.

采用化学酶法设计和合成了6′-唾液乳糖修饰的单价和二价纳米体。在大肠杆菌中重组表达了表皮生长因子受体(EGFR)靶向7D12纳米体,包括单价和二价7D12。通过9步合成了甘油三酯修饰的6′-唾液乳糖衍生物。碳水化合物与纳米体的结合是通过Sortase-A介导的高转化率连接实现的。获得的糖工程纳米体最终通过SDS-PAGE、western blot和质谱进行验证。
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引用次数: 1
Investigations to mechanism and applications of the glycosylation protocol employing 8-methyltosylaminoethynyl-1-naphthyl (MTEAN) glycoside donors 8-甲基甲酰基氨基乙基-1-萘基(MTEAN)糖苷供体糖基化机制及应用研究
IF 1 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-01-01 DOI: 10.1080/07328303.2022.2045021
Si-Yu Zhou , Hui-Juan Liu , Qing-Ju Zhang , Jin-Xi Liao , De-Yong Liu , Ming-Dong Li , Jian-Song Sun

Based on the capability of silyl ethers for efficient glycosylation, the new MTEAN glycosylation protocol utilizing 8-methyltosylaminoethynyl-1-naphthyl (MTEAN) glycosides as donors were extended to one-pot synthesis of nucleosides, late-stage modification of bioactive molecules, and stereoselective construction of 1,2-cis-glucosidic linkages using silyl ethers of the acceptors. Moreover, the reaction mechanism was systematically investigated by control reactions and side product characterizations, leading to the determination of a TfOH-catalyzed ynamide functionality-initiated process, which was further corroborated by identifications of the departure form of leaving group and the real catalyst.

基于硅基醚高效糖基化的能力,新的MTEAN糖基化方案利用8-甲基甲酰基氨基乙基-1-萘基(MTEAN)糖苷作为供体扩展到核苷的一锅合成,生物活性分子的后期修饰,以及利用受体的硅基醚立体选择性构建1,2-顺式糖苷键。此外,通过对照反应和副产物表征对反应机理进行了系统研究,确定了tfoh催化的酰胺官能团引发反应过程,并通过对离去基的离去形式和真实催化剂的鉴定进一步证实了这一结论。
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引用次数: 1
A novel synthesis of tetrahydrocortisone 3-glucuronide 四氢化可的松3-葡萄糖醛酸盐的新合成方法
IF 1 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-01-01 DOI: 10.1080/07328303.2021.2023559
Yan Zhang , Suqing Zhang , Rui Li , Jingshan Shen , Xiangrui Jiang , Haji A. Aisa

A new route for the synthesis of tetrahydrocortisone 3-glucuronide has been developed with cortisone acetate as a starting material. The key step was using lithium tri-tert-butoxyaluminum hydride to reduce the C-3 carbonyl group of 5β-dihydrocortisone acetate (8) to provide 3α-5β-tetrahydrocortisone acetate (5). Then, Koenig–Knorr method was used for glycosylation with glycosyl bromide as the donor, cadmium carbonate as promoter and 4Å molecular sieves as dehydrating agent to give high yield of the desired product. The new route is shorter and gives higher yield than that reported in the literature.

研究了以醋酸可的松为原料合成四氢化可的松3-葡萄糖醛酸盐的新工艺。关键步骤是用三叔丁基氢化铝锂还原5β-二氢化可的松醋酸酯(8)的C-3羰基,得到3α-5β-四氢化可的松醋酸酯(5)。然后以溴化糖基为供体,碳酸镉为促进剂,4Å分子筛为脱水剂,采用koenigk - knorr法进行糖基化反应,得到高收率的产品。新路线比文献报道的路线更短,产率更高。图形抽象
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引用次数: 0
Synthetic studies on naturally occurring sulfonium-type α-glucosidase inhibitors: progress and perspective 天然磺化型α-葡萄糖苷酶抑制剂的合成研究进展与展望
IF 1 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-01-01 DOI: 10.1080/07328303.2022.2115508
Ying Ding , Jingyi Chen , Dan Liu , Jiahui Zhou , Wenxiang Tao , Zhizhong Yang , Genzoh Tanabe , Osamu Muraoka , Weijia Xie

Extracts of Salacia, which are woody climbers mainly distributed in South Asian countries, have long been used to treat type-2 diabetes. Eight sulfonium-type α-glucosidase inhibitors salacinol, kotalanol, ponkoranol, salaprinol and their corresponding de-O-sulfonated analogues have been isolated so far. The unique structures, as well as distinguished biological activities, made them attractive targets in diverse research disciplines. The development of facile synthetic approaches is critical and fundamental for other extended investigations, including chemical biology and pharmaceutical development. This report provides an overview of the recent synthetic efforts directed toward the assembly of these sulfonium-containing polyhydroxylated natural products. This review will be helpful to gather insights into the development of a novel sulfonium type molecules with potential therapeutic applications.

Salacia是一种主要分布在南亚国家的木质攀援植物,其提取物长期以来被用于治疗2型糖尿病。目前已分离出8种磺化型α-葡萄糖苷酶抑制剂salacinol、kotalanol、ponkoranol、salaprinol及其相应的去邻磺化类似物。其独特的结构和独特的生物活性使其在不同学科的研究中具有吸引力。简易合成方法的发展对于包括化学生物学和药物开发在内的其他扩展研究至关重要和基础。本报告概述了最近针对这些含硫多羟基化天然产物的合成努力。这一综述将有助于收集新的具有潜在治疗应用价值的磺胺类分子的发展见解。
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引用次数: 0
A simpler and greener alternative route for anchoring carbohydrates with structural integrity on silica and glass supports 一个更简单和更环保的替代路线锚定碳水化合物与结构完整性的二氧化硅和玻璃支撑
IF 1 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-01-01 DOI: 10.1080/07328303.2022.2121835
Porkodi Kadhirvel , Manuel Azenha , Galya Ivanova , Carlos Pereira , António F. Silva

A novel, straightforward, and environmentally friendly direct coupling procedure to immobilize carbohydrates on solid supports is presented. A characterization study showed that all amino groups on solid supports participated in the linkage with a carbohydrate unit, implicating that the surface load can be easily adjusted by tuning the amination coverage of the surface. Most importantly, the integrity of the cyclic conformation of the linked sugar unit was demonstrated, a feature that is critical for most of the possible applications of carbohydrate-functionalized surfaces. Furthermore, carbohydrate-immobilized submicron particles synthesized by the direct coupling method, on which lectin profiling experiments were conducted, validated the successfulness of our simplistic approach.

提出了一种新颖、简单、环保的将碳水化合物固定在固体载体上的直接偶联方法。一项表征研究表明,固体载体上的所有氨基都参与了与碳水化合物单元的连接,这意味着通过调节表面的胺化覆盖率可以很容易地调节表面负荷。最重要的是,证明了连接糖单元的环状构象的完整性,这一特征对于大多数碳水化合物功能化表面的可能应用至关重要。此外,用直接偶联法合成了碳水化合物固定的亚微米颗粒,并进行了凝集素谱分析实验,验证了我们简化方法的成功。
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引用次数: 0
Facile synthesis of novel 3H-1,5-benzodiazepine-derived aryl C-glycosides by coupling of sugar alkynes, acyl chlorides and 1, 2-phenylenediamine 糖炔、酰氯和1,2 -苯二胺偶联制备新型3h -1,5-苯二氮卓基芳基c -糖苷
IF 1 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-01-01 DOI: 10.1080/07328303.2022.2045020
Qianxia Chen , Xiang Zhou , Fen Han , Fuyi Zhang , Yufen Zhao

Novel 3H-1,5-benzodiazepine-derived aryl C-glycosides were synthesized in good to excellent yields by the coupling of structurally diverse terminal sugar alkynes, aroyl chlorides and 1, 2-phenylenediamine. The protocol is general, mild and efficient. It was suitable for various terminal sugar alkynes and aroyl chlorides, with 37 selected examples. The sugar substrates include pyranosides, furanosides, and acyclic sugars with sensitive and bulky protecting groups. The aroyl chlorides contain electron-donating, electron-withdrawing and electron-neutral substituents.

摘要通过结构多样的末端糖炔、芳酰氯和1,2 -苯二胺的偶联,合成了新型的3h -1,5-苯二氮卓类芳基c -糖苷。该方案一般、温和、有效。该方法适用于各种末端糖炔和芳香烃,选取了37例。糖底物包括吡喃苷、呋喃苷和无环糖,具有敏感和庞大的保护基团。芳酰氯含有供电子、吸电子和电子中性取代基。
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引用次数: 0
Synthesis of glucopyranoside benzimidazolium-based ionic liquids for Pd-catalyzed aqueous Suzuki reaction pd催化铃木反应中葡萄糖吡喃苷苯并咪唑基离子液体的合成
IF 1 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-01-01 DOI: 10.1080/07328303.2022.2141770
Xiaoming Wen , Jian Wang , Luan He , Bisheng Wei , Ying Xie

Several novel benzimidazolium-based ionic liquids (BzIm ILs) with free and acetyl protected glucopyranoside unit were synthesized and used as ligand for Pd-catalyzed environment-friendly Suzuki reaction. The BzIm ILs with the acetyl protection shows the highest activity, probably because the sugar has a large steric hindrance and acetyl groups can coordinate with Pd. The nuclear magnetic resonance spectra of Pd(OAc)2/Glc-BzIm ILs free glucopyranoside indicate that Pd-C is formed. The Pd nanoparticles protected by ILs with a size of 5.3 (0.6) nm are considered to be real active species. A series of fluorene core arylfluorene derivatives were prepared with isolated yields above 90%.

合成了几种具有游离和乙酰基保护的苯并咪唑基离子液体(BzIm il),并将其作为配体用于pd催化的环境友好型铃木反应。具有乙酰基保护的BzIm il表现出最高的活性,这可能是因为糖具有较大的空间位阻,并且乙酰基可以与Pd配合。Pd(OAc)2/Glc-BzIm il游离葡萄糖吡喃苷的核磁共振谱表明Pd- c形成。被il保护的Pd纳米粒子尺寸为5.3 (0.6)nm,被认为是真正的活性物质。制备了一系列芴核心芳基芴衍生物,分离收率在90%以上。
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引用次数: 0
Structural characterization of water-soluble polysaccharides from Sophora flavescens Ait. and their anti-inflammatory activities based on NO release 苦参水溶性多糖的结构表征。以及基于NO释放的抗炎活性
IF 1 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-01-01 DOI: 10.1080/07328303.2023.2174551
Yi-Xuan Li , Bo-Wen Lu , Si-Liang Jiang , Cai-Xia Dong , Juan Du

Sophora flavescens Ait. is a medicinal herb traditionally used to treat inflammatory diseases. In this study, four polysaccharides, SFNP-1, SFNP-2, SFAP-1, and SFAP-2, were isolated from S. flavescens. Both SFNP-1 and SFNP-2 were (1→4)-linked glucans. SFAP-1 and SFAP-2 were identified as pectin-type polysaccharides containing mainly a homo-galacturanan backbone (as shown). NO release inhibition test revealed that the major polysaccharides, SFAP-1 and SFAP-2, did not have a significant anti-inflammatory effect. This result suggests that the anti-inflammatory effect of S. flavescens may not depend on its polysaccharides.

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苦参是传统上用于治疗炎症性疾病的草药。本研究从黄参中分离得到4种多糖,分别为SFNP-1、SFNP-2、srap -1和srap -2。SFNP-1和SFNP-2均为(1→4)链葡聚糖。srap -1和srap -2被鉴定为果胶型多糖,主要含有同型半乳糖聚糖骨架(如图所示)。NO释放抑制试验显示,srap -1和srap -2主要多糖无明显的抗炎作用。提示黄参的抗炎作用可能不依赖于其多糖。下载:下载高清图片(12KB)下载:下载全尺寸图片
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引用次数: 0
Structural and conformational dynamics of human milk oligosaccharides, lacto-N-fucopentaose I and II, through molecular dynamics simulation 通过分子动力学模拟,研究人乳低聚糖,乳- n -fucopentaose I和II的结构和构象动力学
IF 1 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-01-01 DOI: 10.1080/07328303.2022.2150203
B. Lalithamaheswari , C. Anu Radha

Carbohydrates, also known as glycans or sugars are the nature’s most abundant biomolecules. Human breast milk contains soluble oligosaccharides that are involved in the biological recognition process. Oligosaccharides occur in numerous conformational states due to their flexible nature at glycosidic linkages. Molecular dynamics simulation is used to investigate the structural flexibility of glycosidic linkage and intramolecular interactions between molecules. The work focused on human milk oligosaccharide (HMOs), lacto-N-fucopentaose (LNFP) I and II, investigated through MD simulation for 250 ns, and its replicate. Possible conformational models for LNFP I and II were determined and deposited in the open-access database 3DSDSCAR. The structural analysis was carried out for the two HMOs with the CPPTRAJ module.

碳水化合物,也被称为聚糖或糖,是自然界中最丰富的生物分子。人类母乳中含有可溶性低聚糖,参与生物识别过程。低聚糖由于其在糖苷键上的柔韧性而具有多种构象状态。分子动力学模拟用于研究糖苷键的结构灵活性和分子间的分子内相互作用。以人乳寡糖(HMOs)、乳- n -fucopentaose (LNFP) I和II为研究对象,进行了250 ns的MD模拟,并进行了重复实验。确定了LNFP I和LNFP II可能的构象模型,并将其存储在开放存取数据库3DSDSCAR中。利用CPPTRAJ模块对两个hmo进行结构分析。
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引用次数: 1
Comparative study of inclusion complex formation between β-cyclodextrin (host) and aromatic diamines (guests) by mixing in hot water, co-precipitation, and solid-state grinding methods 热水混合、共沉淀法和固态研磨法对β-环糊精(宿主)和芳香二胺(客体)包合物形成的比较研究
IF 1 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-01-01 DOI: 10.1080/07328303.2022.2068026
Mohammed Jabedul Hoque , Mitsuo Toda , Nobuyuki Mase

Aromatic diamines are essential components of polyimide and many other thermosetting polymers. Recent attention has been growing on the threading of cyclodextrins (CDs) onto diamine monomers intended to improve the solubility in water and thermal stability of resultant polymers. The co-precipitation method is often used to isolate inclusion complexes (ICs) of aromatic diamines and other sparingly water-soluble aromatic guest molecules with β-CD. To find the viability of other methods, we studied IC formation between β-CD and some aromatic diamines by mixing in hot water, co-precipitation, and solid-state grinding. ICs formation in water was carried out by solid guest dispersion into the β-CD aqueous solution at 80 °C with high-speed magnetic stirring. In contrast, solid-state grinding was employed by adding a small amount of water to promote IC formation. Thus, ICs prepared by mixing in hot water and solid-state grinding methods were crystallized from water by cooling to 4 °C. Structures of the ICs in solution were confirmed by chemical shifts changes of cavity protons of β-CD in 1H NMR and the cross-peaks between aromatic protons and cavity protons in 1H-1H ROESY NMR. Job’s plot and NMR titration experiments were used to determine the stoichiometric ratio of host and guest in solution.

摘要芳香族二胺是聚酰亚胺和许多其他热固性聚合物的基本成分。最近,人们越来越关注将环糊精(CDs)穿到二胺单体上,以提高所得聚合物在水中的溶解度和热稳定性。共沉淀法通常用于分离芳香族二胺和其他微溶性芳香客体分子与β-CD的包合物(IC)。为了寻找其他方法的可行性,我们通过在热水中混合、共沉淀和固态研磨研究了β-CD和一些芳香族二胺之间的IC形成。通过在80℃下将固体客体分散到β-CD水溶液中,在水中形成IC °C,高速磁力搅拌。相反,通过添加少量的水来促进IC的形成,采用固态研磨。因此,通过在热水中混合和固态研磨方法制备的IC通过冷却至4而从水中结晶 °C。通过1H NMR中β-CD空腔质子的化学位移变化和1H-1H ROESY NMR中芳香族质子与空腔质子之间的交叉峰证实了溶液中IC的结构。利用Job’s图和NMR滴定实验测定了溶液中主客体的化学计量比。图形摘要
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引用次数: 0
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Journal of Carbohydrate Chemistry
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