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Efficient synthesis of 2-benzofuranyl C-glycosides by one-pot cascade reaction of sugar alkynes and substituted 2-iodophenols 通过糖炔和取代的 2-碘苯酚的单锅级联反应高效合成 2-苯并呋喃基 C-糖苷
IF 1.2 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-07-24 DOI: 10.1080/07328303.2023.2280538
Zhaoxin Cao , Xiang Zhou , Fuyi Zhang , Yufen Zhao
2-Benzofuranyl C-glycosides were synthesized in good to excellent yields by one-pot cascade reaction of terminal sugar alkynes and substituted 2-iodophenols. The products have wide structural diversity and potential biological activity. This new synthetic method is general, mild, and efficient. Thirty-seven examples have been given. The structurally diverse terminal sugar alkynes included pyranosides, furanosides, and acyclic sugars with sensitive and bulky protecting groups. The substituted 2-iodophenols contained electron-donating, electron-withdrawing, and electron-neutral substituents. The mechanism for the formation of the products has been proposed.
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引用次数: 0
Two new species of the Phaoniaboleticola-group (Diptera, Muscidae, Phaoniinae) from China. 来自中国的两个 Phaoniaboleticola 群新种(双翅目,鹟科,Phaoniinae)。
IF 1.3 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-07-03 eCollection Date: 2023-01-01 DOI: 10.3897/zookeys.1168.97845
Zhongyan Zhou, Lianmeng Wei

Two new species of Phaonia are described: Phaoniaagitata Zhou & Wei, sp. nov. and Phaonianujiangensis Zhou & Wei, sp. nov., which were collected from Guizhou and Yunnan provinces of southwestern China and are assigned to the boleticola-group. A key to the species of this group is provided. The type specimens are deposited in the Wei Lianmeng Model Worker Innovation Studio, Anshun, Guizhou, China (WLMWISAGC).

本文描述了两个新的Phaonia物种:和 Phaonianujiangensis Zhou & Wei, sp.本研究提供了该组物种的检索表。模式标本保存于贵州安顺魏连萌劳模创新工作室(WLMWISAGC)。
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引用次数: 0
Bacterial cellulose-based hydrogels carrying Lewis X trisaccharides as a system for monitoring carbohydrate–carbohydrate interactions with the naked eye 细菌纤维素基水凝胶携带Lewis X三糖,作为肉眼监测碳水化合物-碳水化合物相互作用的系统
IF 1.2 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-03-24 DOI: 10.1080/07328303.2023.2242927
Jiayu Dong , Katsunari Hiroki , Mizuki Tobito , Keisuke Yoshida , Ai Tanabe , Taiki Shindo , Megu Gunji , Qintong Li , Teruaki Hasegawa
Bacterial cellulose-based hydrogels carrying Lewis X trisaccharides were prepared via a three-step synthetic route, involving (1) NaIO4 oxidation of commercially available nata de coco, (2) reductive amination of the product using propargylamine, and (3) Cu+-catalysed alkyne-azide cycloaddition using azide-functionalised Lewis X trisaccharides. The resultant bacterial cellulose-based hydrogels were assembled in aqueous media containing Ca2+ or Na+, demonstrating ion-mediated interactions among Lewis X trisaccharides. Furthermore, reference experiments using bacterial cellulose-based hydrogels carrying N-acetyl-lactosaminides and those carrying N-acetyl-D-glucosaminides revealed that the two non-reducing terminals (i.e., β-galactoside and α-fucoside of Lewis X trisaccharide) substantially contribute to their interactions.
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引用次数: 0
Chemoselectivity of 3,3'-dithiobis(sulfosuccinimylpropionate)-based 3-mercaptopropionylation of amine-linked aminomonosaccharides 以3,3'-二硫代丙酸磺基琥珀酰丙酸为基础的胺链氨基单糖3-巯基丙酸化反应的化学选择性
IF 1.2 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-03-24 DOI: 10.1080/07328303.2023.2280513
Yikuan Qi , Chunjun Qin , Shengyong Zhu , Jian Yin
Many polysaccharides on the surface of bacteria contain free amino groups, limiting the application of amine-based linker in these glycans. Herein, we investigated the chemoselectivity of N-acylation during the dithiobis(sulfosuccinimidylpropionate)-based 3-mercaptopropionylation of amine-linked aminomonosaccharides. Interestingly, for the 2-, 3-, and 4-aminoglucosides and 4-aminogalactoside, the 3-mercaptopropionyl group was selectively installed onto the amine of the linker. The chemoselectivity for the introduction of the thiol moiety was poor with the 2- and 3-aminogalactosides and 2- and 3-aminomannosides. In the meanwhile, the Fukui function was used to further quantify the nucleophilicity of amino groups. These results will serve well for the preparation of conjugation-ready aminoglycans.
摘要细菌表面的许多多糖含有游离氨基,这限制了胺基连接剂在这些多糖中的应用。在此,我们研究了氨基连接的氨基单糖在二硫代(磺基琥珀酰丙酸)基3-巯基丙酰化过程中n -酰化的化学选择性。有趣的是,对于2-、3-和4-氨基葡萄糖苷和4-氨基半乳糖糖苷,3-巯基丙酰被选择性地安装在连接体的胺上。2-和3-氨基半乳糖苷以及2-和3-氨基甘露糖苷对巯基部分引入的化学选择性较差。同时,利用Fukui函数进一步量化了氨基的亲核性。这些结果对制备偶联型氨基聚糖具有良好的指导意义。关键词:氨基连接;氨基糖;化学选择性;3,3′-二硫代丙酸磺基丁二酰丙酸硫醇连接;本材料可通过互联网免费获取https://www.tandfonline.com/toc/lcar20/current.Disclosure声明作者未报告潜在的利益冲突。项目资助:国家自然科学基金项目[no . 22077052,22277042];国家重点科技发展计划项目[no . 2020YFA0908304]。
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引用次数: 0
Ulvan from green seaweed Ulva lactuca: Optimization of ultrasound-assisted extraction, structure, and cytotoxic activity 绿海藻Ulva lactuca:超声辅助提取、结构及细胞毒活性的优化
IF 1.2 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-03-24 DOI: 10.1080/07328303.2023.2280560
Thuy T. T. Thanh , Quang V. Ngo , Tai T. Nguyen , Anh N. Nguyen , Thu T. M. Quach , Luong V. Dang , Tam Q. Nguyen , Xuan T. T. Do
An ulvan was extracted from green seaweed Ulva lactuca by ultrasound-assisted extraction. The extraction conditions were optimized by response surface methodology. The optimal conditions were extraction temperature at 84.75 °C, extraction time of 30.51 min, solvent to material ratio of 60.51 mL/g to achieve the yield of 22.5%. The ulvan is composed of repeated sequences of three disaccharides: →4)-β-D-Glucuronic acid(1→4)α-L-Rhamnose-3-sulfate(1→, →4)α-L-Iduronic acid(1→4)α-L-Rhamnose-3-sulfate(1→, and →4)α-D-Xylose-2-sulfate(1→4)α-L-Rhamnose-3-sulfate(→. The ulvan showed cytotoxic activities against five human cancer cell lines, including human hepatocellular carcinoma, human breast cancer, human cervical cancer, human colorectal adenocarcinoma and human undifferentiated thyroid carcinomas.
摘要采用超声辅助提取的方法,从绿海藻中提取一种紫檀素。采用响应面法对提取条件进行优化。最佳提取条件为提取温度84.75℃,提取时间30.51 min,料液比60.51 mL/g,得率为22.5%。该化合物由三个双糖组成:→4)-β- d -葡萄糖醛酸(1→4)α- l -鼠李糖-3-硫酸盐(1→,→4)α- l -伊杜醛酸(1→4)α- d -木糖-2-硫酸盐(1→4)α- l -鼠李糖-3-硫酸盐(1→,→4)α- d -木糖-2-硫酸盐(1→4)α- l -鼠李糖-3-硫酸盐(→)。对人肝癌、人乳腺癌、人宫颈癌、人结直肠腺癌和人未分化甲状腺癌等5种人类癌细胞系均有细胞毒活性。关键词:细胞毒活性;结构;超声辅助提取;本研究由越南科技部资助,项目编号为NDT.89.JPN/20。
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引用次数: 0
Betacoronaviral lectins: Identification through a genomic search—A structural and evolutionary biology perspective
IF 1.2 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-03-24 DOI: 10.1080/07328303.2023.2285970
Pavan K. Madasu , Arpita Maity , Dhabaleswar Patra , Thyageshwar Chandran
Carbohydrate-binding proteins known as “Lectins” play a crucial role in host-pathogen interactions. Most of the viral surface proteins have lectin activity. In fact, they make the first line of communication with the host cells. Recent reports indicating the haemagglutination property and structural evidences of coronaviral protein bound with Sialic acid (Sia) draw our attention to exploring the presence of lectins in the Betacoronavirus genus from reference genomes. We have considered the seventeen reference genomes of different species and subspecies under the Betacoronavirus genus to identify lectin fold/domain(s) types. We have employed three strategies for characterizing lectin fold/domain(s). The strategies include the sequence-based search against the conserved domain database (CDD) and profile HMMER and Structure-based search against Protein Data Bank (PDB) and unified platform of lectins UniLectin3D database. Interestingly, both the identified proteins, namely Hemagglutinin-esterase (HE) and Spike (S) protein, were localized on viral membranes and played a pivotal role in host-pathogen interactions. These protein structures are fabricated by most pliable β-strands forming varied architectures and topologies, such as β-sandwich, jelly-roll fold, β-barrel, β-prism, β-trefoil, β-propeller and β-hairpins. The identified lectin fold/domain(s) were compared with the characterized ones and were docked with Sia using HADDOCK, and the binding affinity was calculated using the PRODIGY server. Molecular docking studies reveal that all the identified lectin fold/domains agree with the Canyon hypothesis. Furthermore, it could be observed that coronaviruses are constantly evolving by shedding their extra baggage. The latter variants were found to have only the lectin domain but not the esterase domain.
{"title":"Betacoronaviral lectins: Identification through a genomic search—A structural and evolutionary biology perspective","authors":"Pavan K. Madasu ,&nbsp;Arpita Maity ,&nbsp;Dhabaleswar Patra ,&nbsp;Thyageshwar Chandran","doi":"10.1080/07328303.2023.2285970","DOIUrl":"10.1080/07328303.2023.2285970","url":null,"abstract":"<div><div>Carbohydrate-binding proteins known as “Lectins” play a crucial role in host-pathogen interactions. Most of the viral surface proteins have lectin activity. In fact, they make the first line of communication with the host cells. Recent reports indicating the haemagglutination property and structural evidences of coronaviral protein bound with Sialic acid (Sia) draw our attention to exploring the presence of lectins in the Betacoronavirus genus from reference genomes. We have considered the seventeen reference genomes of different species and subspecies under the Betacoronavirus genus to identify lectin fold/domain(s) types. We have employed three strategies for characterizing lectin fold/domain(s). The strategies include the sequence-based search against the conserved domain database (CDD) and profile HMMER and Structure-based search against Protein Data Bank (PDB) and unified platform of lectins UniLectin3D database. Interestingly, both the identified proteins, namely Hemagglutinin-esterase (HE) and Spike (S) protein, were localized on viral membranes and played a pivotal role in host-pathogen interactions. These protein structures are fabricated by most pliable β-strands forming varied architectures and topologies, such as β-sandwich, jelly-roll fold, β-barrel, β-prism, β-trefoil, β-propeller and β-hairpins. The identified lectin fold/domain(s) were compared with the characterized ones and were docked with Sia using HADDOCK, and the binding affinity was calculated using the PRODIGY server. Molecular docking studies reveal that all the identified lectin fold/domains agree with the Canyon hypothesis. Furthermore, it could be observed that coronaviruses are constantly evolving by shedding their extra baggage. The latter variants were found to have only the lectin domain but not the esterase domain.</div></div>","PeriodicalId":15311,"journal":{"name":"Journal of Carbohydrate Chemistry","volume":"42 13","pages":"Pages 112-134"},"PeriodicalIF":1.2,"publicationDate":"2023-03-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143292443","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A comprehensive study of intravenous iron-carbohydrate nanomedicines: From synthesis methodology to physicochemical and pharmaceutical characterization 静脉注射铁碳水化合物纳米药物的综合研究:从合成方法到物理化学和药物表征
IF 1.2 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-03-24 DOI: 10.1080/07328303.2023.2272892
Ozra Tabasi , Mahdi Roohi Razlighi , Cavus Falamaki
Administration of intravenous iron is pivotal in the management of iron-deficiency anemia patients. In the past, parenteral iron was administrated as a ferric hydroxide complex that caused severe toxic reactions. The introduction of compounds containing iron in a core surrounded by a carbohydrate shell has circumvented this problem. Intravenous iron complexes, such as iron sucrose and iron carboxymaltose, consist of a polynuclear Fe (III)-oxyhydroxide/oxide core that is coated with a specific carbohydrate molecule. The carbohydrate shell stabilizes the insoluble iron core particles in colloidal suspension form and slows down the release of iron. Moreover, the carbohydrate shell chemistry differences influence the stability of the complex and iron release rate. In particular, this paper discusses the preparation method, physicochemical properties, and characteristics of iron sucrose, ferric derisomaltose, iron carboxymaltose, and ferumoxytol. These products differ in their physicochemical and clinical properties such as molecular weight distribution, particle size, zeta potential, free, and labile iron content, stability and release of iron in serum, and maximum tolerated dose. The first-generation of intravenous iron formulations were replaced with new intravenous iron dextran–free formulations, due to an elevated risk of anaphylactic reactions. Comparatively, the third-generation intravenous iron formulations, such as ferric derisomaltose, iron carboxymaltose, and ferumoxytol, allow higher doses of iron due to high complex stability and safety than the second generation formulations like iron sucrose.
摘要静脉给铁是治疗缺铁性贫血的关键。过去,肠外铁以氢氧化铁复合物的形式给药,会引起严重的毒性反应。在碳水化合物外壳包围的核中引入含铁化合物,就绕过了这个问题。静脉注射铁复合物,如蔗糖铁和羧麦芽糖铁,由多核铁(III)-氢氧化物/氧化物核心组成,该核心被特定的碳水化合物分子包裹。碳水化合物外壳稳定了不溶性铁核颗粒的胶体悬浮形式,减缓了铁的释放。此外,碳水化合物壳化学的差异影响了复合物的稳定性和铁的释放速度。重点讨论了蔗糖铁、三异麦芽糖铁、羧麦芽糖铁和阿魏木糖醇的制备方法、理化性质和特性。这些产品的理化性质和临床性质不同,如分子量分布、粒度、zeta电位、游离铁和不稳定铁含量、血清中铁的稳定性和释放以及最大耐受剂量。由于过敏反应的风险增加,第一代静脉注射铁制剂被新的不含右旋糖酐的静脉注射铁制剂所取代。相比之下,第三代静脉注射铁制剂,如三异麦芽糖铁、羧麦芽糖铁和阿魏木糖醇,由于高的复合稳定性和安全性,比第二代制剂如蔗糖铁允许更高的铁剂量。关键词:表征静脉铁铁缺乏铁制剂合成披露声明作者未报告潜在利益冲突。额外的informationFundingNone。
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引用次数: 0
Advances in the synthesis of antiviral agents from carbohydrate-derived chiral pools 糖源性手性池合成抗病毒药物的研究进展
IF 1 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-01-01 DOI: 10.1080/07328303.2023.2189473
Anjali Sharma , Smritilekha Bera , Dhananjoy Mondal

Carbohydrates are the most abundant natural products and a major component on the cell surface of living beings. They are useful building blocks of various natural products and organic synthesis due to their presence of multiple chiral centers and hydroxy groups. The recent outbreak of COVID-19 and other life-threatening viral infections necessitates the development of potent antiviral drugs. In this review, we focused on the synthesis of antiviral drugs to treat influenza, HIV, herpes, hepatitis, and other diseases, from different monosaccharides such as D-glucose, D-mannose, D-xylose, N-acetyl-D-glucosamine, D-gluconolactone, etc., such as anti-influenza drugs remdesivir, Tamiflu, zanamivir, and so on.

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碳水化合物是最丰富的天然产物,是生物细胞表面的主要成分。由于它们的多个手性中心和羟基的存在,它们是各种天然产物和有机合成的有用基石。最近爆发的COVID-19和其他危及生命的病毒感染要求开发强效抗病毒药物。本文综述了以d -葡萄糖、d -甘露糖、d -木糖、n -乙酰- d -葡萄糖胺、d -葡萄糖酸内酯等不同单糖为原料,如抗流感药物瑞德西韦、达菲、扎那米韦等,合成治疗流感、HIV、疱疹、肝炎等疾病的抗病毒药物。下载:下载高分辨率图片(247KB)下载:下载全尺寸图片
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引用次数: 0
New macrocycles incorporating glycolipids via copper-catalyzed triazole coupling 通过铜催化的三唑偶联结合糖脂的新大环
IF 1 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-01-01 DOI: 10.1080/07328303.2022.2039685
Nuha S. Kareem , Shaymaa A. Mohammed , May Jaleel Abed , Asaad H. Aneed , Hayder M. Kamal , N. Idayu Zahid , Karem J. Sabah

A series of new macrocycles based on alkyl glycosides derived from D-glucose and D-galactose was synthesized. The macrocycles were easily obtained by the reaction of dialkynyl derivatives with diazides via copper-catlyzed 1,3-cycloaddition reaction. Simple protecting group strategies were applied to obtain the vicinal dihydroxy derivatives, followed by Williamson etherification with propargyl bromides to get the dialkynyl derivatives. These derivatives were subjected to 1,3-Hüisgen triazole coupling with diazides furnishing the macrocycles in good yields. The 1,3-Hüisgen reaction used to build these macrocycles was investigated thoroughly with respect to reaction time, catalysts, solvents, and temperature for optimum macrocyclisation.

摘要以D-葡萄糖和D-半乳糖为原料,合成了一系列新的大环化合物。通过铜催化的1,3-环加成反应使二芳基衍生物与二叠氮化物反应,容易获得大环。采用简单的保护基策略得到邻位二羟基衍生物,然后用溴丙炔进行Williamson醚化反应得到二烷基衍生物。将这些衍生物与二叠氮化物进行1,3-Hüisgen三唑偶联,以高产率提供大环。从反应时间、催化剂、溶剂和最佳大环化温度等方面对用于构建这些大环的1,3-Hüisgen反应进行了彻底研究。图形摘要
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引用次数: 0
Highly stereoselective construction of 1,2-cis-D-quinovosamine glycosides for the synthesis of Pseudomonas aeruginosa O-antigen disaccharide 1,2-顺式- d -喹啉氨基糖苷的高立体选择性构建合成铜绿假单胞菌o抗原双糖
IF 1 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-01-01 DOI: 10.1080/07328303.2022.2055049
Hongli Hou , Guangzong Tian , Junjie Fu , Chunjun Qin , Guodong Chen , Xiaopeng Zou , Jing Hu , Jian Yin

The highly stereoselective synthesis of complex carbohydrates containing 1,2-cis-quinovosamine is an on-going challenge. Here, we report a synergistic strategy of merging reagent modulation and acyl remote participation for highly stereoselective construction of 1,2-cis-D-quinovosamine linkages. The strategy is applied to the preparation of natural disaccharide present on the surface of Pseudomonas aeruginosa bacteria. The resulting disaccharide can be covalently bound to microarray surface or carrier via the aminopentyl linker at the reducing end, allowing for exploring its antigenic and immunogenic properties.

高度立体选择性合成含有1,2-顺式-喹诺糖胺的复合碳水化合物是一个持续的挑战。在这里,我们报道了一种融合试剂调制和酰基远程参与的协同策略,用于高度立体选择性的1,2-顺式- d -喹诺胺键的构建。该方法应用于铜绿假单胞菌表面天然双糖的制备。所得到的双糖可以通过还原端的氨基戊基连接物与微阵列表面或载体共价结合,从而可以探索其抗原和免疫原性。
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引用次数: 0
期刊
Journal of Carbohydrate Chemistry
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