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The Juxtaposition of Allosteric and Catalytic Inhibition in PLK1: Tradeoff for Chemotherapy and Thermodynamic Profiles of KBJK557 and BI 6727 PLK1 中异位抑制与催化抑制的并存:KBJK557 和 BI 6727 的化疗权衡与热力学特征
IF 2.2 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-12-15 DOI: 10.1142/s2737416523500680
Ernest Oduro-Kwateng, Ali H. Rabbad, M. E. Soliman
{"title":"The Juxtaposition of Allosteric and Catalytic Inhibition in PLK1: Tradeoff for Chemotherapy and Thermodynamic Profiles of KBJK557 and BI 6727","authors":"Ernest Oduro-Kwateng, Ali H. Rabbad, M. E. Soliman","doi":"10.1142/s2737416523500680","DOIUrl":"https://doi.org/10.1142/s2737416523500680","url":null,"abstract":"","PeriodicalId":15603,"journal":{"name":"Journal of Computational Biophysics and Chemistry","volume":"65 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2023-12-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138999027","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Computational approach to identify the Key Genes for Invasive Lobular Carcinoma (ILC) Diagnosis and Therapies 用计算方法确定浸润性小叶癌 (ILC) 诊断和治疗的关键基因
IF 2.2 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-12-15 DOI: 10.1142/s2737416523500692
S. Anitha, S. Nandhini, D. Premnath, M. Indiraleka
{"title":"Computational approach to identify the Key Genes for Invasive Lobular Carcinoma (ILC) Diagnosis and Therapies","authors":"S. Anitha, S. Nandhini, D. Premnath, M. Indiraleka","doi":"10.1142/s2737416523500692","DOIUrl":"https://doi.org/10.1142/s2737416523500692","url":null,"abstract":"","PeriodicalId":15603,"journal":{"name":"Journal of Computational Biophysics and Chemistry","volume":"87 4","pages":""},"PeriodicalIF":2.2,"publicationDate":"2023-12-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138998183","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Molecular Dynamics Study on the Binding Characteristics and Transport Mechanism of Polysaccharides with Different Molecular Weights in Camellia Oleifera Abel 油茶中不同分子量多糖的结合特性和迁移机制的分子动力学研究
IF 2.2 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-12-08 DOI: 10.1142/s2737416523500679
Jihang Zhai, Fangfang Fan, Chaojie Wang, Zhiyang Zhang, Sheng Zhang, Yuan Zhao
{"title":"Molecular Dynamics Study on the Binding Characteristics and Transport Mechanism of Polysaccharides with Different Molecular Weights in Camellia Oleifera Abel","authors":"Jihang Zhai, Fangfang Fan, Chaojie Wang, Zhiyang Zhang, Sheng Zhang, Yuan Zhao","doi":"10.1142/s2737416523500679","DOIUrl":"https://doi.org/10.1142/s2737416523500679","url":null,"abstract":"","PeriodicalId":15603,"journal":{"name":"Journal of Computational Biophysics and Chemistry","volume":"87 5","pages":""},"PeriodicalIF":2.2,"publicationDate":"2023-12-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139010924","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Fragment-Based Protein Structure Prediction, Where Are We Now? 基于片段的蛋白质结构预测,我们现在在哪里?
IF 2.2 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-12-08 DOI: 10.1142/s2737416523300018
Qudsia Noor, Raheem Kayode, Rizwan Riaz, Areeba Siddiqui, Aiza Hassan Mirza, Abdul Rauf Siddiqi
{"title":"Fragment-Based Protein Structure Prediction, Where Are We Now?","authors":"Qudsia Noor, Raheem Kayode, Rizwan Riaz, Areeba Siddiqui, Aiza Hassan Mirza, Abdul Rauf Siddiqi","doi":"10.1142/s2737416523300018","DOIUrl":"https://doi.org/10.1142/s2737416523300018","url":null,"abstract":"","PeriodicalId":15603,"journal":{"name":"Journal of Computational Biophysics and Chemistry","volume":"73 2","pages":""},"PeriodicalIF":2.2,"publicationDate":"2023-12-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139011319","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Computational studies of multi-target directed ligands against acetylcholinesterase, butyrylcholinesterase and amyloid beta as potential anti-Alzheimer's agents 针对乙酰胆碱酯酶、丁酰胆碱酯酶和淀粉样蛋白 beta 的多靶向配体作为潜在抗老年痴呆药物的计算研究
IF 2.2 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-12-01 DOI: 10.1142/s2737416523500667
Neha Maurya, Mareechika Gaddam, Abha Sharma
{"title":"Computational studies of multi-target directed ligands against acetylcholinesterase, butyrylcholinesterase and amyloid beta as potential anti-Alzheimer's agents","authors":"Neha Maurya, Mareechika Gaddam, Abha Sharma","doi":"10.1142/s2737416523500667","DOIUrl":"https://doi.org/10.1142/s2737416523500667","url":null,"abstract":"","PeriodicalId":15603,"journal":{"name":"Journal of Computational Biophysics and Chemistry","volume":" 2","pages":""},"PeriodicalIF":2.2,"publicationDate":"2023-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138613336","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Antifibromyalgic activity of Phytomolecule Niranthin: In-Vivo analysis, Molecular docking, Dynamics and DFT 植物大分子 Niranthin 的抗纤维肌痛活性:体内分析、分子对接、动力学和 DFT
IF 2.2 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-12-01 DOI: 10.1142/s2737416523500655
A. Chopade, Vikram H. Potdar, Suraj N. Mali, Susmita Yadav, Anima Pandey, Chin-Hung Lai, Essa M. Saied, Oberdan Oliveira Ferreira, M. D. de Oliveira, S. S. Gurav, Eloísa Helena de Aguiar Andrade
{"title":"Antifibromyalgic activity of Phytomolecule Niranthin: In-Vivo analysis, Molecular docking, Dynamics and DFT","authors":"A. Chopade, Vikram H. Potdar, Suraj N. Mali, Susmita Yadav, Anima Pandey, Chin-Hung Lai, Essa M. Saied, Oberdan Oliveira Ferreira, M. D. de Oliveira, S. S. Gurav, Eloísa Helena de Aguiar Andrade","doi":"10.1142/s2737416523500655","DOIUrl":"https://doi.org/10.1142/s2737416523500655","url":null,"abstract":"","PeriodicalId":15603,"journal":{"name":"Journal of Computational Biophysics and Chemistry","volume":"6 11","pages":""},"PeriodicalIF":2.2,"publicationDate":"2023-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138609620","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
MLBKFD: probabilistic model methods to infer pseudo trajectories from single-cell data MLBKFD:从单细胞数据推断伪轨迹的概率模型方法
IF 2.2 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-11-17 DOI: 10.1142/s2737416524400015
Changfeng Han, Wenjie Cao, Cheng Li, Yanbing Guo, Yuebin Wang, Yazhou Shi, Ben-Gong Zhang
{"title":"MLBKFD: probabilistic model methods to infer pseudo trajectories from single-cell data","authors":"Changfeng Han, Wenjie Cao, Cheng Li, Yanbing Guo, Yuebin Wang, Yazhou Shi, Ben-Gong Zhang","doi":"10.1142/s2737416524400015","DOIUrl":"https://doi.org/10.1142/s2737416524400015","url":null,"abstract":"","PeriodicalId":15603,"journal":{"name":"Journal of Computational Biophysics and Chemistry","volume":"21 4","pages":""},"PeriodicalIF":2.2,"publicationDate":"2023-11-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139264894","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Spatially Resolved Transcriptomics Reveals Local Invasion-Related Genes in Liver Hepatocellular Carcinoma: Exploring the Therapeutic Potential of a Chimeric Protein Targeting Glypican-3 空间解析转录组学揭示肝脏肝细胞癌中与局部侵袭相关的基因:探索靶向 Glypican-3 的嵌合蛋白的治疗潜力
IF 2.2 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-11-17 DOI: 10.1142/s2737416523500643
M. Naveed, Hamza Jamil, Tariq Aziz, Syeda Izma Makhdoom, A. Alamri, M. Alhomrani, Roaa Mohammed Tahir Kassim, Nehad A. Shaer, Aminah A. Barqawi, N. Al-Abbas
{"title":"Spatially Resolved Transcriptomics Reveals Local Invasion-Related Genes in Liver Hepatocellular Carcinoma: Exploring the Therapeutic Potential of a Chimeric Protein Targeting Glypican-3","authors":"M. Naveed, Hamza Jamil, Tariq Aziz, Syeda Izma Makhdoom, A. Alamri, M. Alhomrani, Roaa Mohammed Tahir Kassim, Nehad A. Shaer, Aminah A. Barqawi, N. Al-Abbas","doi":"10.1142/s2737416523500643","DOIUrl":"https://doi.org/10.1142/s2737416523500643","url":null,"abstract":"","PeriodicalId":15603,"journal":{"name":"Journal of Computational Biophysics and Chemistry","volume":"45 9","pages":""},"PeriodicalIF":2.2,"publicationDate":"2023-11-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139264690","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Assessment of Melia azedarach Plant Extracts Activity against Hypothetical Protein of Mycobacterium Tuberculosis via GC-MS Analysis and In-Silico approaches 采用气相色谱-质谱分析和计算机技术评价苦楝提取物对结核分枝杆菌假想蛋白的活性
4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-11-07 DOI: 10.1142/s2737416523500631
Muhammad Naveed, Imran Ali, Tariq Aziz, Nouman Ali, Ali Hassan, Shafiq Ur Rahman, Riffat Aziz, Metab Alharbi, Abdulrahman Alsahammari, Abdullah F. Alasmari
{"title":"Assessment of <i>Melia azedarach</i> Plant Extracts Activity against Hypothetical Protein of Mycobacterium Tuberculosis via GC-MS Analysis and <i>In-Silico</i> approaches","authors":"Muhammad Naveed, Imran Ali, Tariq Aziz, Nouman Ali, Ali Hassan, Shafiq Ur Rahman, Riffat Aziz, Metab Alharbi, Abdulrahman Alsahammari, Abdullah F. Alasmari","doi":"10.1142/s2737416523500631","DOIUrl":"https://doi.org/10.1142/s2737416523500631","url":null,"abstract":"","PeriodicalId":15603,"journal":{"name":"Journal of Computational Biophysics and Chemistry","volume":"112 10","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-11-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135541073","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Computational screening of potential fatty acid synthase inhibitors as broad-spectrum antiviral agents 计算筛选潜在的脂肪酸合酶抑制剂作为广谱抗病毒药物
4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-10-27 DOI: 10.1142/s2737416523500606
Shaohua Xu, Huicheng Yuan, Ling Li, Kai Yang, Liangcun Zhao
{"title":"Computational screening of potential fatty acid synthase inhibitors as broad-spectrum antiviral agents","authors":"Shaohua Xu, Huicheng Yuan, Ling Li, Kai Yang, Liangcun Zhao","doi":"10.1142/s2737416523500606","DOIUrl":"https://doi.org/10.1142/s2737416523500606","url":null,"abstract":"","PeriodicalId":15603,"journal":{"name":"Journal of Computational Biophysics and Chemistry","volume":"62 11","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-10-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"136312430","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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