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International Symposium on Ciliate Biology (ISCB 2025) and Interdisciplinary Research 国际纤毛虫生物学研讨会(ISCB 2025)和跨学科研究
IF 2.6 4区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-02-06 DOI: 10.1111/jeu.70066
Ravi Toteja, Komal Kamra, Rup Lal, Santosh Kumar, Utkarsh Sood, Princy Hira, Alan Warren, Harpreet Kaur, Swati Maurya, Sandeep Antil, Jyoti Dagar, Seema Makhija

The International Symposium on Ciliate Biology (ISCB 2025) was held at Acharya Narendra Dev College, University of Delhi. The symposium brought together leading experts from around the world. Preceded by hands-on workshops in taxonomy and genomics, the symposium offered a dynamic platform for knowledge exchange, featuring plenary lectures, invited talks, oral presentations, and posters on topics spanning biodiversity, taxonomy, cell biology, model systems, health, toxicology, and science communication. Sessions highlighted ciliates' ecological significance—from climate change monitoring to their roles as bioindicators and agents of environmental restoration. Cutting-edge research showcased molecular, cellular, and integrative approaches, including phylogenomic analyses, innovative uses of ciliates in pollution detection, vector control, and explored practical applications of ciliates in health and agriculture. The event drew approximately 300 participants, with strong international representation, fostering new collaborations and inspiring future research. Recommendations from the symposia advocate for enhanced interdisciplinary efforts, expanded molecular tools, frugal science innovations, and greater public science communication. The ISCB 2025 concluded with a cultural program and a General Body Meeting of the Indian Society of Ciliate Biology (ISoCB) outlining strategic directions for ISoCB, including global membership and triennial symposia. The event underlined the pivotal role of ciliates in biological research, environmental stewardship, and education.

国际纤毛虫生物学研讨会(isb2025)在德里大学的Acharya Narendra Dev学院举行。研讨会汇集了来自世界各地的顶尖专家。在分类学和基因组学的实践研讨会之前,研讨会提供了一个动态的知识交流平台,包括全体讲座、邀请演讲、口头报告和海报,主题涵盖生物多样性、分类学、细胞生物学、模型系统、健康、毒理学和科学传播。塞申斯强调了纤毛虫的生态意义——从气候变化监测到它们作为生物指标和环境恢复媒介的作用。前沿研究展示了分子、细胞和综合方法,包括系统基因组分析、纤毛虫在污染检测、病媒控制中的创新应用,并探索了纤毛虫在卫生和农业中的实际应用。该活动吸引了大约300名参与者,具有强大的国际代表性,促进了新的合作并激发了未来的研究。专题讨论会的建议提倡加强跨学科的努力,扩大分子工具,节俭的科学创新和更大的公共科学交流。ISCB 2025以一个文化项目和印度纤毛虫生物学学会(ISoCB)全体会议结束,该会议概述了ISoCB的战略方向,包括全球会员和三年一次的专题讨论会。这次活动强调了纤毛虫在生物研究、环境管理和教育中的关键作用。
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引用次数: 0
Genetic Features of the Scuticociliate Pathogen Philaster sp. Isolate FWC2 That Causes Sea Urchin Mass Mortality 导致海胆大量死亡的囊藻致病菌Philaster sp. FWC2的遗传特征。
IF 2.6 4区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-02-02 DOI: 10.1111/jeu.70065
Shen Jean Lim, Mya Breitbart

A scuticociliate most closely related to Philaster apodigitiformis caused mass mortalities of diadematoid sea urchins and was cultured as Philaster sp. isolate FWC2. We sequenced the metagenomic content of this isolate, which was predicted to represent ≤ 56% of the complete genome. Based on k-mer counts, the haploid genome size was predicted to be 122–136 Mbp. We assembled and annotated a 4,088 bp nuclear ribosomal operon, a 41,396 bp mitochondrial genome with 19.22% G + C content, 24 protein-coding genes, 6 tRNA genes, and 2 rRNA genes, and a protein sequence homologous to β-PKA in Philaster apodigitiformis potentially involved in host infection.

与Philaster apo数字化最接近的一种扇尾虫引起了类蝶体海胆的大量死亡,并被培养为Philaster sp.分离菌株FWC2。我们对该分离物的宏基因组含量进行了测序,预计其占全基因组的≤56%。根据k-mer计数,预测单倍体基因组大小为122- 136mbp。我们组装并注释了一个4088 bp的核糖体操纵子,一个41396 bp的线粒体基因组(G + C含量19.22%),24个蛋白质编码基因,6个tRNA基因和2个rRNA基因,以及一个与可能参与宿主感染的Philaster apo数字化虫β-PKA同源的蛋白质序列。
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引用次数: 0
A Practical Approach to Study Uncultivated Protists Using Single-Cell Techniques for Electron Microscopy 利用电子显微镜单细胞技术研究原生生物的实用方法。
IF 2.6 4区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-02-02 DOI: 10.1111/jeu.70061
Maia V. Palka, Kevin C. Wakeman, Eunji Park, Gordon Lax, Brian S. Leander

Protists represent a significant portion of eukaryotic diversity with a wide range of ecological roles, lifestyles, and diverse morphological traits. Despite their widespread importance in ecological systems and their potential as model organisms, most protist lineages remain poorly characterized, in part due to their small size and the fact that many lineages remain uncultivated. High-resolution microscopy techniques like transmission and scanning electron microscopy (TEM and SEM) are powerful tools for studying protists, but the application of these techniques has significant limitations when applied to uncultivated species, largely due to the absence of reproducible methodologies tailored to studying single cells with small sample sizes. We present a robust protocol for preparing individual eukaryotic cells for TEM and SEM that addresses these limitations, can be implemented in the field, and uses inexpensive and easily obtainable materials. Our method minimizes cell loss during sample preparation for TEM and SEM, and it enables the tracking of single cells through TEM preparation to ensure cells can be localized and oriented appropriately for ultramicrotome sectioning. This protocol expands the feasibility of ultrastructural studies on uncultivated protist lineages and aims to make high-resolution microscopy more accessible for the broader community of protistologists who study uncultivated taxa.

原生生物是真核生物多样性的重要组成部分,具有广泛的生态作用、生活方式和多样的形态特征。尽管它们在生态系统中具有广泛的重要性,并具有作为模式生物的潜力,但大多数原生生物谱系的特征仍然很差,部分原因是它们的体积小,而且许多谱系仍未被培育。高分辨率显微镜技术,如透射电镜和扫描电子显微镜(TEM和SEM)是研究原生生物的有力工具,但这些技术的应用在应用于未栽培物种时具有显着的局限性,主要是因为缺乏专门用于研究小样本量单细胞的可重复方法。我们提出了一种强大的方案,用于制备用于TEM和SEM的单个真核细胞,该方案解决了这些限制,可以在现场实施,并且使用廉价且易于获得的材料。我们的方法最大限度地减少了TEM和SEM样品制备过程中的细胞损失,并且可以通过TEM制备对单个细胞进行跟踪,以确保细胞可以适当地定位和定向以进行超微切片。该协议扩大了对未栽培原生生物谱系进行超微结构研究的可行性,并旨在为研究未栽培分类群的更广泛的原生生物学家提供更容易获得的高分辨率显微镜。
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引用次数: 0
The Microbiome Within a Microbe: Rethinking Blastocystis Biology 微生物中的微生物组:对囊胚生物学的重新思考。
IF 2.6 4区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-01-26 DOI: 10.1111/jeu.70056
Daisy Shaw, Eleni Gentekaki, Anastasios D. Tsaousis

Blastocystis spp., one of the most prevalent microeukaryotes in the human gut, has long puzzled researchers with its ambiguous role in health and disease. Decades-old microscopy studies reported bacterial- and viral-like particles within Blastocystis spp. cells, but these findings have been mainly overlooked. Comparable associations in other protozoa, such as those between Trichomonas vaginalis and Mycoplasma, as well as protozoan–virus interactions, are known to influence metabolism, immune evasion, and ecological fitness. Here, we revisit these neglected observations in Blastocystis spp., framing them within the holobiont concept and proposing that this protist may host its own microbial consortium. We also propose potential mechanisms, ecological implications, and modern experimental strategies—from organ-on-a-chip to single-cell multi-omics—to rigorously test this hypothesis. Recognizing Blastocystis spp. as a possible “microbiome within a microbe” could transform our understanding of its biology and its place in gut microbial ecology.

囊虫是人类肠道中最常见的微真核生物之一,长期以来,它在健康和疾病中的模糊作用一直困扰着研究人员。几十年前的显微镜研究报告了囊胚细胞内的细菌和病毒样颗粒,但这些发现主要被忽视了。其他原生动物的类似关联,如阴道毛滴虫和支原体之间的关联,以及原生动物与病毒的相互作用,已知会影响代谢、免疫逃避和生态适应性。在这里,我们重新审视这些在囊胚中被忽视的观察结果,将它们置于全息生物的概念中,并提出这种原生生物可能拥有自己的微生物联盟。我们还提出了潜在的机制、生态影响和现代实验策略——从芯片上的器官到单细胞多组学——来严格检验这一假设。认识到囊虫是一种可能的“微生物中的微生物组”可以改变我们对其生物学及其在肠道微生物生态学中的地位的理解。
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引用次数: 0
The Romantic Discovery of Radiolaria in the Ocean 海洋中放射虫的浪漫发现。
IF 2.6 4区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-01-18 DOI: 10.1111/jeu.70062
Johan Decelle

Radiolaria are unicellular marine organisms (protists) that have been drifting in oceanic plankton for hundreds of millions of years. These mineral architects can build extraordinarily complex skeletons, which fascinated and puzzled naturalists observing water samples through rudimentary microscopes. In the 19th century, the discovery and study of Radiolaria are associated with scientific voyages and human adventures. Naturalists who studied medicine and anatomy in European universities were captivated by the morphology of Radiolaria and expressed a profound wanderlust to collect them in the ocean. These intrepid and workaholic adventurers devoted their restless lives to studying microscopic life, while also actively engaging in teaching and sharing their observations and hypotheses with students. This article aims to retrace the discovery of Radiolaria through the lives of prominent naturalists and marine biologists, primarily Christian Gottfried Ehrenberg, Thomas Henry Huxley, Johannes Müller, and Ernst Haeckel. It also highlights the intellectual and geographic influences that shaped their research, including figures such as Johannes Wolfgang von Goethe and Alexander von Humboldt, as well as places like Jena, Helgoland, Villefranche-sur-Mer and Italy, which served as sampling locations and sources of romantic and artistic inspiration. Pioneering work on Radiolaria played a central role in shaping several emerging concepts (e.g., cell theory, individuality) and fields (e.g., taxonomy, evolution of morphology, symbiosis). The discovery of Radiolaria therefore reveals that even the most elusive marine microorganisms can deeply transform our understanding of life.

放射虫是单细胞海洋生物(原生生物),已经在海洋浮游生物中漂流了数亿年。这些矿物建筑师可以建造非常复杂的骨架,这让通过基本显微镜观察水样的博物学家既着迷又困惑。在19世纪,放射虫的发现和研究与科学航行和人类冒险有关。在欧洲大学学习医学和解剖学的博物学家被放射虫的形态所吸引,并表达了在海洋中收集它们的深刻的旅行欲望。这些无畏的工作狂冒险家把他们不安分的生活投入到微观生命的研究中,同时也积极参与教学,与学生分享他们的观察和假设。本文旨在通过杰出的博物学家和海洋生物学家,主要是克里斯蒂安·戈特弗里德·埃伦伯格、托马斯·亨利·赫胥黎、约翰内斯·梅勒和恩斯特·海克尔的生活,追溯放射虫的发现。它还强调了影响他们研究的知识和地理因素,包括约翰内斯·沃尔夫冈·冯·歌德和亚历山大·冯·洪堡等人物,以及耶拿、黑尔戈兰、海边维尔弗朗什和意大利等地,这些地方曾是浪漫和艺术灵感的采样地点和来源。放射菌的开创性工作在形成几个新兴概念(如细胞理论、个体性)和领域(如分类学、形态进化、共生)方面发挥了核心作用。因此,放射虫的发现表明,即使是最难以捉摸的海洋微生物也能深刻地改变我们对生命的理解。
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引用次数: 0
Host Phosphorus Limitation Triggers Trade-Off Between Stoichiometric Homeostasis and Production in the Micro-Parasite Amoebophrya ceratii 寄主磷限制触发微寄生虫角状变形虫体内化学计量平衡和生产之间的权衡。
IF 2.6 4区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-01-14 DOI: 10.1111/jeu.70060
Irene Romero Rodríguez, Cécile Jauzein, Emilie Rabiller, Sophie Schmitt, Florian Caradec, Mickael Le Gac, Claire Labry

Phosphorus (P) is a chemical element essential for life that can drive dynamics of microorganisms in marine environments. Nutrient acquisition by parasitic organisms is mainly done through infection. In the case of micro-parasites, how host diet limitations affect parasite stoichiometry and parasite–host interaction has not been thoroughly studied yet. This study focused on the free-living stage of Amoebophrya ceratii, a micro-parasite (Syndiniales, Dinoflagellates) of marine dinoflagellates. It aims to examine how host P limitation prior to infection affects parasite stoichiometry and infection cycle. To this end, Scrippsiella acuminata was used as a host and cultivated under P-replete or P-limiting conditions. Infection and parasite production were monitored, and elemental quotas and stoichiometry of the freshly produced dinospores were determined. In P-replete conditions, elemental quotas and ratios of the parasites were similar to their host, showing a strong need for P. While the host's stoichiometry was greatly impacted by P limitation, parasites were able to maintain stoichiometric homeostasis and elemental cell quotas. Finally, host P limitation mainly affected the dinospore production, exhibiting a trade-off between dinospores quotas, stoichiometric homeostasis, and production. These findings have implications for host–parasite interactions and biogeochemical cycling in coastal waters.

磷(P)是一种生命必需的化学元素,可以驱动海洋环境中微生物的动力学。寄生生物主要通过感染获取营养。在微型寄生虫的情况下,寄主的饮食限制如何影响寄生虫的化学计量和寄主与寄主的相互作用尚未得到充分的研究。本研究的重点是海洋鞭毛虫的一种微寄生虫——角状变形虫的自由生活阶段。目的是研究感染前宿主磷限制如何影响寄生虫的化学计量和感染周期。为此,以尖锐Scrippsiella为寄主,在补磷和限磷条件下进行培养。监测感染和寄生虫的产生,并确定新产生的恐龙孢子的元素配额和化学计量。在全磷条件下,寄主体内的元素配额和比例与寄主相似,表现出对磷的强烈需求。寄主体内的化学计量受到磷限制的严重影响,寄主体内的化学计量平衡和元素细胞配额得以维持。最后,寄主磷限制主要影响恐龙孢子产量,表现出恐龙孢子配额、化学计量稳态和产量之间的权衡关系。这些发现对沿海水域宿主-寄生虫相互作用和生物地球化学循环具有重要意义。
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引用次数: 0
Comparison of Methods to Characterize the Microbiota of Myxomycete Plasmodia 黏菌疟原虫菌群鉴定方法的比较。
IF 2.6 4区 生物学 Q3 MICROBIOLOGY Pub Date : 2025-12-17 DOI: 10.1111/jeu.70058
Juan Pablo Molina-Viramontes, Elizabeth Selene Gómez-Acata, Stephanie Hereira-Pacheco, Arturo Estrada-Torres, Yendi E. Navarro-Noya

Myxomycetes are valuable models for studying interactions between single-celled eukaryotes and bacteria; however, little is known about their microbiota or optimal DNA extraction methods. We analyzed the bacterial community of Claustria didermoides plasmodia using commercial and noncommercial DNA extraction methods. A total of 218 amplicon sequence variants (ASVs) were identified, dominated by Pseudomonadota (78%), Bacillota (10%), and Actinomycetota (9%). Achromobacter denitrificans was the most abundant species, with 3–7 codominant ASVs, including opportunistic pathogens. The commercial kit captured higher diversity, while the noncommercial method favored Gram-negatives and preserved DNA integrity longer when phenol was added.

黏菌是研究单细胞真核生物与细菌相互作用的重要模型;然而,人们对它们的微生物群或最佳DNA提取方法知之甚少。采用商业和非商业DNA提取方法分析了双皮革疟原虫的细菌群落。共鉴定出218个扩增子序列变异(asv),以假单胞菌(78%)、芽孢杆菌(10%)和放线菌(9%)为主。反硝化无色杆菌数量最多,共有3-7种共显性asv,包括条件致病菌。商业试剂盒捕获了更高的多样性,而非商业方法倾向于革兰氏阴性,当添加苯酚时,保存DNA完整性的时间更长。
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引用次数: 0
GPI-Anchored Proteomes and Their Biochemical Pathway in Alveolates: Evolutionary Insights and Heterologous Expression in Tetrahymena Thermophila gpi锚定的蛋白质组及其在肺泡中的生化途径:嗜热四膜虫的进化见解和异源表达
IF 2.6 4区 生物学 Q3 MICROBIOLOGY Pub Date : 2025-12-08 DOI: 10.1111/jeu.70055
Gervasio Puca, María G. Montes, Juan Orlowski, Mariela Lujan Tomazic, Daniel H. González Maglio, Carolina de la Fuente, Mónica Florin-Christensen, Leonhard Schnittger, Alejandro D. Nusblat

Glycosylphosphatidylinositol (GPI)-anchored proteins (GPI-APs) play essential roles in eukaryotic cell biology, yet their evolutionary diversity across alveolates remains poorly understood. Here, we conducted a comparative genomic analysis of GPI biosynthetic pathways and GPI-AP repertoires across representative species of Ciliophora, Apicomplexa, and Dinoflagellata. Our findings reveal lineage-specific patterns of gene loss, expansion, and functional divergence, with ciliates exhibiting reduced canonical enzyme sets but expanded trafficking components. Using a benchmarked pipeline of GPI-AP predictors combined with signal peptide detection, we identified candidate GPI-anchored proteins and performed functional annotation to determine enriched Gene Ontology terms. To complement the bioinformatic analyses, we expressed the apicomplexan GPI-anchored antigen GPI4 from Babesia bovis in Tetrahymena thermophila. This approach extends previous efforts that used Tetrahymena as a heterologous expression system for parasite surface antigens. The recombinant protein localized to ciliary membranes and showed features consistent with proper processing. This study highlights the evolutionary plasticity of GPI systems in alveolates and reinforces the utility of Tetrahymena as a eukaryotic platform for the production and analysis of GPI-anchored proteins with potential diagnostic or immunoprophylactic applications.

糖基磷脂酰肌醇(GPI)锚定蛋白(GPI- aps)在真核细胞生物学中起着至关重要的作用,但它们在不同牙泡中的进化多样性仍然知之甚少。在这里,我们对纤毛虫、顶复虫和鞭毛虫等代表性物种的GPI生物合成途径和GPI- ap谱进行了比较基因组分析。我们的研究结果揭示了基因丢失、扩增和功能分化的谱系特异性模式,纤毛虫表现出典型酶组减少,但运输成分增加。利用GPI-AP预测因子的基准管道结合信号肽检测,我们确定了候选gpi锚定蛋白,并进行了功能注释,以确定富集的基因本体术语。为了补充生物信息学分析,我们在嗜热四膜虫中表达了来自牛巴贝斯虫的顶端复合体gpi -锚定抗原GPI4。该方法扩展了先前使用四膜虫作为寄生虫表面抗原的异源表达系统的工作。重组蛋白定位于纤毛膜,表现出与正常加工相一致的特征。这项研究强调了肺泡中GPI系统的进化可塑性,并加强了四膜虫作为生产和分析GPI锚定蛋白的真核平台的效用,这些蛋白具有潜在的诊断或免疫预防应用。
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引用次数: 0
Molecular Characterization of Superoxide Dismutase and Its Putative Relationship With Drug Resistance in Eimeria Tenella 柔嫩艾美球虫超氧化物歧化酶的分子特征及其与耐药的关系
IF 2.6 4区 生物学 Q3 MICROBIOLOGY Pub Date : 2025-12-08 DOI: 10.1111/jeu.70057
Xinrui Xie, Yu Yu, Guilin Liu, Qiping Zhao, Shunhai Zhu, Jinwen Wang, Jiayu Bai, Wenqi Han, Hui Dong, Hongyu Han

Avian coccidiosis, an intestinal parasitic disease caused by Eimeria spp., remains one of the most economically significant diseases in poultry. Although anticoccidial drugs have been effective in controlling coccidiosis, the emergence of drug resistance in Eimeria poses a persistent challenge to disease management. Our previous study revealed differential expression of superoxide dismutase (EtSOD) between drug-sensitive (DS) and drug-resistant Eimeria tenella strains. In this study, qPCR and western blot analyses demonstrated that EtSOD expression was significantly upregulated in diclazuril-resistant (DZR) and maduramicin-resistant (MRR) strains compared to the DS strain, with a progressive increase corresponding to higher drug concentrations. Enzyme activity assays further confirmed that SOD activity was elevated in both resistant strains. Additionally, qPCR results indicated higher EtSOD mRNA levels in second-generation merozoites and unsporulated oocysts than in sporulated oocysts and sporozoites. Indirect immunofluorescence revealed that fluorescence intensity increased during parasite development within host cells. Notably, EtSOD was predominantly localized on the surface of sporozoites and merozoites, as well as on the parasitophorous vacuole membrane (PVM) post-invasion of DF-1 cells, suggesting its potential role in host–parasite interactions and immune evasion. Collectively, these findings imply that EtSOD may contribute to drug resistance and facilitate parasite growth and development within host cells.

禽球虫病是由艾美耳球虫引起的一种肠道寄生虫病,是家禽中最具经济意义的疾病之一。虽然抗球虫药物在控制球虫病方面有效,但艾美耳球虫耐药性的出现对疾病管理构成了持续的挑战。我们之前的研究揭示了超氧化物歧化酶(EtSOD)在药物敏感(DS)和耐药的柔嫩艾美球虫株之间的表达差异。本研究通过qPCR和western blot分析发现,与DS菌株相比,dilazuril resistant (DZR)和maduramicin resistant (MRR)菌株中EtSOD的表达明显上调,且随着药物浓度的升高,EtSOD的表达也逐渐升高。酶活性测定进一步证实,两种耐药菌株的SOD活性均升高。此外,qPCR结果显示,第二代分裂子和无孢子卵囊中EtSOD mRNA水平高于有孢子卵囊和孢子子。间接免疫荧光显示,在寄主细胞内的寄生虫发育过程中,荧光强度增加。值得注意的是,EtSOD主要定位于孢子子和分生子表面,以及DF-1细胞入侵后的寄生液泡膜(PVM),这表明它在宿主-寄生虫相互作用和免疫逃避中可能发挥作用。总的来说,这些发现表明EtSOD可能有助于宿主细胞内的耐药性和促进寄生虫的生长和发育。
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引用次数: 0
Editorial Acknowledgment 社论承认。
IF 2.6 4区 生物学 Q3 MICROBIOLOGY Pub Date : 2025-11-24 DOI: 10.1111/jeu.70054
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引用次数: 0
期刊
Journal of Eukaryotic Microbiology
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