The gene encoding a β- galactosidase was cloned from Lactobacillus plantarum FMNP01 and expressed in Escherichia coli BL21(DE3). The characteristics of this purified recombinant enzyme, L.pFMNP01Gal, were determined, and its transgalactosylation reaction conditions for the production of lactulose were optimized. Using ONPG as substrate, the L.pFMNP01Gal showed specific activity of 980 U/g with a Km of 6.86 mM and a Kcat of 22.47/s. This enzyme was most stable at 40–50 °C, and exhibited optimum catalytic activity at 40 °C and pH 7.0. The activity of L.pFMNP01Gal was greatly inhibited by Cu2+, while other tested metal ions had little influence on it. For the optimization of transgalactosylation reaction, high lactulose production was achieved when 60% (W/V) sugars were used as substrates with a lactose/fructose mass ratio of 2:1, and 2 U/mL of L.pFMNP01Gal as catalyst. Under these optimum conditions, 18.38 ± 2.17 g/L of lactulose was synthesized in 6 h at 50 °C. This study provides an alternative method for enzymatic synthesis of lactulose.
{"title":"Characterization of recombinant β- galactosidase and its use in enzymatic synthesis of lactulose from lactose and fructose","authors":"Xue-Yi Liao , Qian-Wang Zheng , Qian-ling Zhou , Jun-Fang Lin , Li-Qiong Guo , Fang Yun","doi":"10.1016/j.molcatb.2016.09.019","DOIUrl":"https://doi.org/10.1016/j.molcatb.2016.09.019","url":null,"abstract":"<div><p>The gene encoding a β- galactosidase was cloned from <em>Lactobacillus plantarum</em> FMNP01 and expressed in <em>Escherichia coli</em> BL21(DE3). The characteristics of this purified recombinant enzyme, L.pFMNP01Gal, were determined, and its transgalactosylation reaction conditions for the production of lactulose were optimized. Using <em>O</em>NPG as substrate, the L.pFMNP01Gal showed specific activity of 980<!--> <!-->U/g with a Km of 6.86<!--> <!-->mM and a Kcat of 22.47/s. This enzyme was most stable at 40–50<!--> <!-->°C, and exhibited optimum catalytic activity at 40<!--> <!-->°C and pH 7.0. The activity of L.pFMNP01Gal was greatly inhibited by Cu<sup>2+</sup>, while other tested metal ions had little influence on it. For the optimization of transgalactosylation reaction, high lactulose production was achieved when 60% (W/V) sugars were used as substrates with a lactose/fructose mass ratio of 2:1, and 2<!--> <!-->U/mL of L.pFMNP01Gal as catalyst. Under these optimum conditions, 18.38<!--> <!-->±<!--> <!-->2.17<!--> <!-->g/L of lactulose was synthesized in 6<!--> <!-->h at 50<!--> <!-->°C. This study provides an alternative method for enzymatic synthesis of lactulose.</p></div>","PeriodicalId":16416,"journal":{"name":"Journal of Molecular Catalysis B-enzymatic","volume":"134 ","pages":"Pages 253-260"},"PeriodicalIF":0.0,"publicationDate":"2016-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.molcatb.2016.09.019","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"91658175","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2016-12-01DOI: 10.1016/j.molcatb.2016.11.012
Zi-Tong Meng , Chen Hu , Yan Zhang , Hai-Lun Guo , Mu Li
Cold-active lipases have emerged as an important class of biocatalysts for chemical and food industries due to their high efficiency at low temperature and long-chain substrate preference. In an effort to explore the feasibility of converting a cold-active esterase from Monascus ruber (Lip10) into a cold-active lipase, an Y264F variant in which the salt bridge between K243 and Y264 was disrupted has been constructed and characterized. The interfacial kinetic parameter, Kmapp for pNP-laurate (C12) and pNP-palmitate (C16), of Lip10 esterase was 4.2 and 5.7 times higher than those of the Y264F variant, respectively. Substrate specificity of the Y264F variant changed from shot-chain length substrate to medium- and long-chain length substrates, indicating that the Y264F variant turned into a lipase. Meanwhile, the Y264F variant displayed 48.6% maximum activity at 4 °C and 3.2 kcal/mol activation energy in the range of 5–30 °C, suggesting that it was still cold-active. Based on analysis of the structure-function relationships, it suggests that the shape of substrate channel controlled by the conserved salt bridge was very important for the substrate specificity. This study provides a way to alter the substrate preference of the Lip10 esterase as well as new insight into the structural basis of esterase substrate specificity.
{"title":"Conversion of a Monascus ruber esterase into a lipase by disrupting a salt bridge","authors":"Zi-Tong Meng , Chen Hu , Yan Zhang , Hai-Lun Guo , Mu Li","doi":"10.1016/j.molcatb.2016.11.012","DOIUrl":"10.1016/j.molcatb.2016.11.012","url":null,"abstract":"<div><p>Cold-active lipases have emerged as an important class of biocatalysts for chemical and food industries due to their high efficiency at low temperature and long-chain substrate preference. In an effort to explore the feasibility of converting a cold-active esterase from <em>Monascus ruber</em> (Lip10) into a cold-active lipase, an Y264F variant in which the salt bridge between K243 and Y264 was disrupted has been constructed and characterized. The interfacial kinetic parameter, K<sub>m</sub><sup>app</sup> for pNP-laurate (C12) and pNP-palmitate (C16), of Lip10 esterase was 4.2 and 5.7 times higher than those of the Y264F variant, respectively. Substrate specificity of the Y264F variant changed from shot-chain length substrate to medium- and long-chain length substrates, indicating that the Y264F variant turned into a lipase. Meanwhile, the Y264F variant displayed 48.6% maximum activity at 4<!--> <!-->°C and 3.2<!--> <!-->kcal/mol activation energy in the range of 5–30<!--> <!-->°C, suggesting that it was still cold-active. Based on analysis of the structure-function relationships, it suggests that the shape of substrate channel controlled by the conserved salt bridge was very important for the substrate specificity. This study provides a way to alter the substrate preference of the Lip10 esterase as well as new insight into the structural basis of esterase substrate specificity.</p></div>","PeriodicalId":16416,"journal":{"name":"Journal of Molecular Catalysis B-enzymatic","volume":"134 ","pages":"Pages 178-185"},"PeriodicalIF":0.0,"publicationDate":"2016-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.molcatb.2016.11.012","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"79425832","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2016-12-01DOI: 10.1016/j.molcatb.2016.06.005
Nikola Lončar , Nataša Božić , Zoran Vujčić
Bacterial laccases have proven advantages over fungal and plant counterparts in terms of wider pH optimum, higher stability and broader biocatalytic scope. In this work, Bacillus licheniformis ATCC 9945a laccase is produced heterologously in Escherichia coli. Produced laccase exhibits remarkably high temperature optimum at 90 °C and possess significant thermostability and resistance to inactivation by organic solvents. Laccase has an apparent melting temperature of 79 °C at pH 7.0 and above 70 °C in range of pH 5.0–8.0, while having half-life of 50 min at 70 °C. Presence of 10% organic solvents such as acetonitrile, dimethylformamide, dimethylsulfoxide or methanol reduces melting temperature to 45–52 °C but activity remains practically unimpaired. With 50% of acetonitrile and methanol laccase retained ∼40% of initial activity. EDTA and 300 mM sodium-chloride have positive effect on activity. Enzyme is active on syringaldazine, ABTS, phenols, amines, naphthol, lignin and lignin model compounds and mediates CC bond formation via oxidative coupling after one electron oxidation of phenolic group. Successful polymerization of 2-naphthol was achieved with 77% conversion of 250 mg/L 2-naphtol in only 15 min which may further expand substrate scope of this enzyme towards polymer production and/or xenobiotics removal for environmental applications.
{"title":"Expression and characterization of a thermostable organic solvent-tolerant laccase from Bacillus licheniformis ATCC 9945a","authors":"Nikola Lončar , Nataša Božić , Zoran Vujčić","doi":"10.1016/j.molcatb.2016.06.005","DOIUrl":"10.1016/j.molcatb.2016.06.005","url":null,"abstract":"<div><p>Bacterial laccases have proven advantages over fungal and plant counterparts in terms of wider pH optimum, higher stability and broader biocatalytic scope. In this work, <em>Bacillus licheniformis</em> ATCC 9945a laccase is produced heterologously in <em>Escherichia coli</em>. Produced laccase exhibits remarkably high temperature optimum at 90<!--> <!-->°C and possess significant thermostability and resistance to inactivation by organic solvents. Laccase has an apparent melting temperature of 79<!--> <!-->°C at pH 7.0 and above 70<!--> <!-->°C in range of pH 5.0–8.0, while having half-life of 50<!--> <!-->min at 70<!--> <!-->°C. Presence of 10% organic solvents such as acetonitrile, dimethylformamide, dimethylsulfoxide or methanol reduces melting temperature to 45–52<!--> <!-->°C but activity remains practically unimpaired. With 50% of acetonitrile and methanol laccase retained ∼40% of initial activity. EDTA and 300<!--> <!-->mM sodium-chloride have positive effect on activity. Enzyme is active on syringaldazine, ABTS, phenols, amines, naphthol, lignin and lignin model compounds and mediates C<img>C bond formation <em>via</em> oxidative coupling after one electron oxidation of phenolic group. Successful polymerization of 2-naphthol was achieved with 77% conversion of 250<!--> <!-->mg/L 2-naphtol in only 15<!--> <!-->min which may further expand substrate scope of this enzyme towards polymer production and/or xenobiotics removal for environmental applications.</p></div>","PeriodicalId":16416,"journal":{"name":"Journal of Molecular Catalysis B-enzymatic","volume":"134 ","pages":"Pages 390-395"},"PeriodicalIF":0.0,"publicationDate":"2016-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.molcatb.2016.06.005","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"83472527","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2016-12-01DOI: 10.1016/j.molcatb.2016.10.004
Ana I. Vicente , Javier Viña-Gonzalez , Paloma Santos-Moriano , Carlos Marquez-Alvarez , Antonio O. Ballesteros , Miguel Alcalde
Enzymatic production of C–N heteropolymeric dyes at alkaline pHs is an attractive process for the textile industry. In this work, we have designed a fungal laccase by directed evolution so that it may be used at alkaline pHs for the synthesis of C–N heteropolymeric dyes (C–N polydye) from catechol and 2,5-diaminobenzenesulfonic acid (2,5-DABSA). Firstly, several medium- and high-redox potential fungal laccases from previous laboratory evolution campaigns were benchmarked for the synthesis of the C–N polydye at pH 8.0, choosing an alkaline laccase mutant from Myceliophthora thermophila as the departure point for further engineering. Mutant libraries were then constructed, expressed in Saccharomyces cerevisiae and screened using a high-throughput colorimetric assay for the detection of the C–N polydye. By combining directed and focused molecular evolution, a novel, strongly expressed alkaline laccase variant was identified. This laccase was secreted at 37 mg/L and its catalytic efficiency for the oxidation of catechol and 2,5-DABSA at pH 8.0 was enhanced 3.5-fold relative to that of the wild-type, promoting the synthesis of the C–N polydye at basic pHs. While the improved expression was mostly the result of accumulating mutations that favor the yeast’s codon usage together with the recovery of a secretion mutation, the enhanced C–N polydye synthetic activity of the mutant laccase was dependent on the alkaline mutations it inherited. Readily secreted, this laccase mutant would appear to be a valuable platform for organic synthesis at basic pHs.
{"title":"Evolved alkaline fungal laccase secreted by Saccharomyces cerevisiae as useful tool for the synthesis of C–N heteropolymeric dye","authors":"Ana I. Vicente , Javier Viña-Gonzalez , Paloma Santos-Moriano , Carlos Marquez-Alvarez , Antonio O. Ballesteros , Miguel Alcalde","doi":"10.1016/j.molcatb.2016.10.004","DOIUrl":"10.1016/j.molcatb.2016.10.004","url":null,"abstract":"<div><p>Enzymatic production of C–N heteropolymeric dyes at alkaline pHs is an attractive process for the textile industry. In this work, we have designed a fungal laccase by directed evolution so that it may be used at alkaline pHs for the synthesis of C–N heteropolymeric dyes (C–N polydye) from catechol and 2,5-diaminobenzenesulfonic acid (2,5-DABSA). Firstly, several medium- and high-redox potential fungal laccases from previous laboratory evolution campaigns were benchmarked for the synthesis of the C–N polydye at pH 8.0, choosing an alkaline laccase mutant from <em>Myceliophthora thermophila</em> as the departure point for further engineering. Mutant libraries were then constructed, expressed in <em>Saccharomyces cerevisiae</em> and screened using a high-throughput colorimetric assay for the detection of the C–N polydye. By combining directed and focused molecular evolution, a novel, strongly expressed alkaline laccase variant was identified. This laccase was secreted at 37<!--> <!-->mg/L and its catalytic efficiency for the oxidation of catechol and 2,5-DABSA at pH 8.0 was enhanced 3.5-fold relative to that of the wild-type, promoting the synthesis of the C–N polydye at basic pHs. While the improved expression was mostly the result of accumulating mutations that favor the yeast’s codon usage together with the recovery of a secretion mutation, the enhanced C–N polydye synthetic activity of the mutant laccase was dependent on the alkaline mutations it inherited. Readily secreted, this laccase mutant would appear to be a valuable platform for organic synthesis at basic pHs.</p></div>","PeriodicalId":16416,"journal":{"name":"Journal of Molecular Catalysis B-enzymatic","volume":"134 ","pages":"Pages 323-330"},"PeriodicalIF":0.0,"publicationDate":"2016-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.molcatb.2016.10.004","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"90380196","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2016-12-01DOI: 10.1016/j.molcatb.2016.08.017
Dana I. Colpa, Marco W. Fraaije
The heterologous overexpression level of the bacterial dye decolorizing peroxidase TfuDyP in Escherichia coli was increased sixty fold to approximately 200 mg of purified enzyme per liter culture broth by fusing the enzyme to the small ubiquitin-related modifier protein (SUMO). The highly overexpressed SUMO-TfuDyP was, however, almost inactive. Analysis of the enzyme by UV–vis absorption spectroscopy and high-resolution mass spectrometry showed that a large fraction of the highly overexpressed enzyme contained the iron deficient heme precursor protoporphyrin IX (PPIX) instead of heme. Here we show that the activity of the enzyme was dependent on the expression level of the protein.
{"title":"High overexpression of dye decolorizing peroxidase TfuDyP leads to the incorporation of heme precursor protoporphyrin IX","authors":"Dana I. Colpa, Marco W. Fraaije","doi":"10.1016/j.molcatb.2016.08.017","DOIUrl":"10.1016/j.molcatb.2016.08.017","url":null,"abstract":"<div><p>The heterologous overexpression level of the bacterial dye decolorizing peroxidase <em>Tfu</em>DyP in <em>Escherichia coli</em> was increased sixty fold to approximately 200<!--> <!-->mg of purified enzyme per liter culture broth by fusing the enzyme to the small ubiquitin-related modifier protein (SUMO). The highly overexpressed SUMO-<em>Tfu</em>DyP was, however, almost inactive. Analysis of the enzyme by UV–vis absorption spectroscopy and high-resolution mass spectrometry showed that a large fraction of the highly overexpressed enzyme contained the iron deficient heme precursor protoporphyrin IX (PPIX) instead of heme. Here we show that the activity of the enzyme was dependent on the expression level of the protein.</p></div>","PeriodicalId":16416,"journal":{"name":"Journal of Molecular Catalysis B-enzymatic","volume":"134 ","pages":"Pages 372-377"},"PeriodicalIF":0.0,"publicationDate":"2016-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.molcatb.2016.08.017","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"85911898","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2016-12-01DOI: 10.1016/j.molcatb.2016.10.001
Maryam Siroosi , Mohammad Ali Amoozegar , Khosro Khajeh
Laccases are multicopper oxidases with various biotechnological applications that oxidize different aromatic or inorganic substrates. In present work, different bacterial strains isolated from Urmia lake, a hypersaline lake in northwest of Iran, were screened to find laccase-producing ones. Spore and an extracellular enzyme from a halotolerant spore-forming bacterium, Bacillus sp. strain WT, showed laccase activity toward typical laccase substrates: syringaldazine and 2, 2′-azino-bis (3-ethylbenzothiazoline-6-sulfonate). The extracellular laccase (0.01 U mL−1) decolorized sulphonyl green BLE up to 97% at pH 7.0 after two h incubation at 35 °C, without any addition of mediators. This enzyme with apparent molecular mass of 180 kDa was purified using ammonium sulfate precipitation method and anion exchange chromatography. The optimum laccase activity toward 2, 2′-azino-bis (3-ethylbenzothiazoline-6-sulfonate) and syringaldazine was at 55 °C and pH values of 5.0 and 8.0, respectively. One mM of metal ions, Na+ and Ni2+, increased the enzyme activity by 12%. The enzyme from Bacillus sp. strain WT could be able to tolerate up to 600–800 mM NaCl (a very strong laccase inhibitor) and showed halotolerant nature with maximum activity at 100 mM NaCl. One mM NaN3 (another potent laccase inhibitor) almost had no effect on the laccase activity; however, 1 mM l-Cys reduced 87% of its original activity. KM values for the purified enzyme on 2, 2′-azino-bis (3-ethylbenzothiazoline-6-sulfonate) and syringaldazine were determined to be 132.7 and 3.7 μM, with corresponding kcat values of 309 and 51 s−1, respectively. The present study is among the first studies on laccase activity of a halotolerant bacterial strain isolated from a hypersaline lake.
漆酶是具有多种生物技术应用的多铜氧化酶,可氧化不同的芳香或无机底物。本研究从伊朗西北部的高盐湖乌尔米亚湖中分离出不同的细菌菌株,筛选产生漆酶的菌株。来自耐盐孢子形成细菌芽孢杆菌菌株WT的孢子和胞外酶对典型的漆酶底物:丁香醛嗪和2,2 ' -氮基-双(3-乙基苯并噻唑啉-6-磺酸盐)显示出漆酶活性。细胞外漆酶(0.01 U mL−1)在35℃、不添加任何介质的条件下,在pH 7.0条件下对磺胺绿BLE进行2小时脱色,脱色率高达97%。采用硫酸铵沉淀法和阴离子交换色谱法纯化该酶,表观分子质量为180kda。漆酶对2,2′-氮基-双(3-乙基苯并噻唑-6-磺酸盐)和紫丁香嗪的最佳活性分别为55℃、5.0和8.0。1 mM的金属离子Na+和Ni2+可使酶活性提高12%。Bacillus sp.菌株WT能耐受600-800 mM NaCl(一种很强的漆酶抑制剂),并表现出耐盐性,在100 mM NaCl下活性最大。一mM NaN3(另一种有效的漆酶抑制剂)对漆酶活性几乎没有影响;然而,1 mM l-Cys使其活性降低了87%。纯化酶在2,2′-氮基-双(3-乙基苯并噻唑-6-磺酸盐)和丁香嗪上的KM值分别为132.7和3.7 μM,对应的kcat值分别为309和51 s−1。本研究是从高盐湖中分离出来的耐盐细菌菌株的漆酶活性的首次研究之一。
{"title":"Purification and characterization of an alkaline chloride-tolerant laccase from a halotolerant bacterium, Bacillus sp. strain WT","authors":"Maryam Siroosi , Mohammad Ali Amoozegar , Khosro Khajeh","doi":"10.1016/j.molcatb.2016.10.001","DOIUrl":"10.1016/j.molcatb.2016.10.001","url":null,"abstract":"<div><p>Laccases are multicopper oxidases with various biotechnological applications that oxidize different aromatic or inorganic substrates. In present work, different bacterial strains isolated from Urmia lake, a hypersaline lake in northwest of Iran, were screened to find laccase-producing ones. Spore and an extracellular enzyme from a halotolerant spore-forming bacterium<em>, Bacillus</em> sp. strain WT, showed laccase activity toward typical laccase substrates: syringaldazine and 2, 2′-azino-bis (3-ethylbenzothiazoline-6-sulfonate). The extracellular laccase (0.01<!--> <!-->U<!--> <!-->mL<sup>−1</sup>) decolorized sulphonyl green BLE up to 97% at pH 7.0 after two h incubation at 35<!--> <!-->°C, without any addition of mediators. This enzyme with apparent molecular mass of 180<!--> <!-->kDa was purified using ammonium sulfate precipitation method and anion exchange chromatography. The optimum laccase activity toward 2, 2′-azino-bis (3-ethylbenzothiazoline-6-sulfonate) and syringaldazine was at 55<!--> <!-->°C and pH values of 5.0 and 8.0, respectively. One mM of metal ions, Na<sup>+</sup> and Ni<sup>2+</sup>, increased the enzyme activity by 12%. The enzyme from <em>Bacillus</em> sp. strain WT could be able to tolerate up to 600–800<!--> <!-->mM NaCl (a very strong laccase inhibitor) and showed halotolerant nature with maximum activity at 100<!--> <!-->mM NaCl. One mM NaN<sub>3</sub> (another potent laccase inhibitor) almost had no effect on the laccase activity; however, 1<!--> <!-->mM <span>l</span>-Cys reduced 87% of its original activity. <em>K</em><sub>M</sub> values for the purified enzyme on 2, 2′-azino-bis (3-ethylbenzothiazoline-6-sulfonate) and syringaldazine were determined to be 132.7 and 3.7<!--> <!-->μM, with corresponding <em>k</em><sub>cat</sub> values of 309 and 51<!--> <!-->s<sup>−1</sup>, respectively. The present study is among the first studies on laccase activity of a halotolerant bacterial strain isolated from a hypersaline lake.</p></div>","PeriodicalId":16416,"journal":{"name":"Journal of Molecular Catalysis B-enzymatic","volume":"134 ","pages":"Pages 89-97"},"PeriodicalIF":0.0,"publicationDate":"2016-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.molcatb.2016.10.001","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"84466890","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2016-12-01DOI: 10.1016/j.molcatb.2016.10.012
Shuyu Wu , Yilin Wang , Tingting Shen , Junhui Wang , Guangya Zhang
We have successfully obtained a recombinant xylanase by fusing with elastin-like polypeptides (ELPs), the xylanase SoxB underwent a sharp irreversible phase transition, and self-assembled into an insoluble but more catalytically operative particle. This was analogous to the immobilized xylanase to a large extent and aroused our interest to gain new insights into the determinant factor that may cause this phenomenon. We herein listed several candidate factors including the length of ELPs, linker sequence, buffer properties, and the target protein, subsequently we evaluated their contributions to the formation of the active aggregates. The results suggested that SoxB was fused with ELPs as desired protein partners, neither ELPs length nor the linker type made crucial contribution to the formation of active aggregates. However, when Na2CO3 was chosen as the salt to trigger the phase transition, the catalytic activities detected in aggregates accounted for more than 87.7% of total activity, whereas above 83.8% of the activity remained in supernatant when using Na2SO4. Then we introduced an alkali-tolerant xylanase termed as Xyl and compared it with SoxB, and found that the activity ratio in insoluble particle dropped to 15.3% in Na2CO3 and 19.3% in Na2SO4 respectively, only a few insoluble aggregates observed during the purification. Therefore, we speculated the property of xylanase partner fused to ELPs should be the predominant factor to form the catalytically active insoluble aggregates, and this provides a promising not yet reported perspective for industrial application of “immobilized” SoxB.
{"title":"Investigation on the underlying mechanism: How fusion xylanase-ELPs self-assembles into insoluble active aggregates","authors":"Shuyu Wu , Yilin Wang , Tingting Shen , Junhui Wang , Guangya Zhang","doi":"10.1016/j.molcatb.2016.10.012","DOIUrl":"10.1016/j.molcatb.2016.10.012","url":null,"abstract":"<div><p>We have successfully obtained a recombinant xylanase by fusing with elastin-like polypeptides (ELPs), the xylanase SoxB underwent a sharp irreversible phase transition, and self-assembled into an insoluble but more catalytically operative particle. This was analogous to the immobilized xylanase to a large extent and aroused our interest to gain new insights into the determinant factor that may cause this phenomenon. We herein listed several candidate factors including the length of ELPs, linker sequence, buffer properties, and the target protein, subsequently we evaluated their contributions to the formation of the active aggregates. The results suggested that SoxB was fused with ELPs as desired protein partners, neither ELPs length nor the linker type made crucial contribution to the formation of active aggregates. However, when Na<sub>2</sub>CO<sub>3</sub> was chosen as the salt to trigger the phase transition, the catalytic activities detected in aggregates accounted for more than 87.7% of total activity, whereas above 83.8% of the activity remained in supernatant when using Na<sub>2</sub>SO<sub>4</sub>. Then we introduced an alkali-tolerant xylanase termed as Xyl and compared it with SoxB, and found that the activity ratio in insoluble particle dropped to 15.3% in Na<sub>2</sub>CO<sub>3</sub> and 19.3% in Na<sub>2</sub>SO<sub>4</sub> respectively, only a few insoluble aggregates observed during the purification. Therefore, we speculated the property of xylanase partner fused to ELPs should be the predominant factor to form the catalytically active insoluble aggregates, and this provides a promising not yet reported perspective for industrial application of “immobilized” SoxB.</p></div>","PeriodicalId":16416,"journal":{"name":"Journal of Molecular Catalysis B-enzymatic","volume":"134 ","pages":"Pages 247-252"},"PeriodicalIF":0.0,"publicationDate":"2016-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.molcatb.2016.10.012","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"86336573","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2016-12-01DOI: 10.1016/j.molcatb.2016.09.006
Xue-Dong Zhang, Jian Song, Na Gao, Zhi Guan, Yan-Hong He
This article presents a one-pot synthesis of nitrocyclopropanes via Michael addition initiated ring-closure sequence reactions of bromonitroalkane to α,β-unsaturated enones. Moderate to favorable yields (55–93%) and certain enantioselectivities were obtained with α-amylase from hog pancreas as the catalyst. This strategy utilizes the unnatural ability of enzymes to provide a convenient and biocatalytic method for green organic synthesis.
{"title":"One-pot synthesis of nitrocyclopropane: α-Amylase-catalyzed Michael addition initiated ring-closure sequence reactions","authors":"Xue-Dong Zhang, Jian Song, Na Gao, Zhi Guan, Yan-Hong He","doi":"10.1016/j.molcatb.2016.09.006","DOIUrl":"10.1016/j.molcatb.2016.09.006","url":null,"abstract":"<div><p>This article presents a one-pot synthesis of nitrocyclopropanes via Michael addition initiated ring-closure sequence reactions of bromonitroalkane to α,β-unsaturated enones. Moderate to favorable yields (55–93%) and certain enantioselectivities were obtained with α-amylase from hog pancreas as the catalyst. This strategy utilizes the unnatural ability of enzymes to provide a convenient and biocatalytic method for green organic synthesis.</p></div>","PeriodicalId":16416,"journal":{"name":"Journal of Molecular Catalysis B-enzymatic","volume":"134 ","pages":"Pages 1-8"},"PeriodicalIF":0.0,"publicationDate":"2016-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.molcatb.2016.09.006","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"81801920","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2016-12-01DOI: 10.1016/j.molcatb.2016.10.015
Gabriela I. Furque , Fabricio R. Bisogno , Virginia E. Sosa
This work extends the present knowledge about the ability of filamentous fungi and Baker’s Yeast to selectively transform oxygen-containing compounds. Previously, it has been demonstrated that several species of the Aspergillus genus are able to perform selective oxidation of benzopyrans. Isochroman or 3,4-dihydro-1H-benzopyran (1) was chosen as model substrate for the biotransformation since related motifs are often found in the structure of natural products with important biological and pharmacological activities. All the tested strains showed the ability to oxidize 1. Chemodivergent reaction pathways between the employed microorganisms were observed. The use of cytochrome P450 enzyme inhibitors, and different oxygenation conditions allowed to inquire about the type of enzymes involved in the process. The results obtained were compared with chemical one-electron oxidation of compound 1 and thus, a metabolic pathway was proposed.
{"title":"Chemodivergent fungal oxidation of isochroman","authors":"Gabriela I. Furque , Fabricio R. Bisogno , Virginia E. Sosa","doi":"10.1016/j.molcatb.2016.10.015","DOIUrl":"10.1016/j.molcatb.2016.10.015","url":null,"abstract":"<div><p>This work extends the present knowledge about the ability of filamentous fungi and Baker’s Yeast to selectively transform oxygen-containing compounds. Previously, it has been demonstrated that several species of the <em>Aspergillus</em> genus are able to perform selective oxidation of benzopyrans. Isochroman or 3,4-dihydro-1<em>H</em>-benzopyran (<strong>1</strong>) was chosen as model substrate for the biotransformation since related motifs are often found in the structure of natural products with important biological and pharmacological activities. All the tested strains showed the ability to oxidize <strong>1</strong>. Chemodivergent reaction pathways between the employed microorganisms were observed. The use of cytochrome P450 enzyme inhibitors, and different oxygenation conditions allowed to inquire about the type of enzymes involved in the process. The results obtained were compared with chemical one-electron oxidation of compound <strong>1</strong> and thus, a metabolic pathway was proposed.</p></div>","PeriodicalId":16416,"journal":{"name":"Journal of Molecular Catalysis B-enzymatic","volume":"134 ","pages":"Pages 310-316"},"PeriodicalIF":0.0,"publicationDate":"2016-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.molcatb.2016.10.015","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"86899235","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2016-12-01DOI: 10.1016/j.molcatb.2016.10.020
Jiang-Ke Yang, Ji-Wen Zhang, Lin Mao, Xun You, Guang-Jun Chen
The enzymatic hydrolyzation of inulin by endo-inulinase to produce oligofructoses, a new type of food additive and health product, is a promising, “green”, and environmentally friendly technique. To identify novel genetic sources of endo-inulinase genes and facilitate their industrial application for oligofructose production, we cloned an endo-inulinase gene from a Fusarium oxysporum strain and achieved high-level expression in the genetically modified Pichia pastoris strain in a pilot-scale bioreactor by using strategies such as C-terminal truncation and mutagenesis of protease-sensitive sites. We then optimized the parameters of the inulinase reaction and the amount of enzyme used to inulin hydrolysis and oligofructose production. The results of this study should facilitate the bulk production of inulinase and provide a reference for the industrial production of oligofructose from inulin.
{"title":"Genetic modification and optimization of endo-inulinase for the enzymatic production of oligofructose from inulin","authors":"Jiang-Ke Yang, Ji-Wen Zhang, Lin Mao, Xun You, Guang-Jun Chen","doi":"10.1016/j.molcatb.2016.10.020","DOIUrl":"10.1016/j.molcatb.2016.10.020","url":null,"abstract":"<div><p>The enzymatic hydrolyzation of inulin by endo-inulinase to produce oligofructoses, a new type of food additive and health product, is a promising, “green”, and environmentally friendly technique. To identify novel genetic sources of endo-inulinase genes and facilitate their industrial application for oligofructose production, we cloned an endo-inulinase gene from a <em>Fusarium oxysporum</em> strain and achieved high-level expression in the genetically modified <em>Pichia pastoris</em><span> strain in a pilot-scale bioreactor by using strategies such as C-terminal truncation and mutagenesis of protease-sensitive sites. We then optimized the parameters of the inulinase reaction and the amount of enzyme used to inulin hydrolysis and oligofructose production. The results of this study should facilitate the bulk production of inulinase and provide a reference for the industrial production of oligofructose from inulin.</span></p></div>","PeriodicalId":16416,"journal":{"name":"Journal of Molecular Catalysis B-enzymatic","volume":"134 ","pages":"Pages 225-232"},"PeriodicalIF":0.0,"publicationDate":"2016-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.molcatb.2016.10.020","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"78665551","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}