Pub Date : 2016-11-01Epub Date: 2017-03-09DOI: 10.1016/j.molcatb.2017.03.004
Stefano Serra , Davide De Simeis , Elisabetta Brenna
The four isomeric forms of the flavour linalool oxide (pyranoid) were synthesized starting from the inexpensive monoterpene terpinolene. The key steps of the process include mCPBA epoxidation of the starting diene, alumina-catalysed rearrangement of the obtained diepoxide and the diastereoselective reduction of the ketone 2,2,6-trimethyl-6-vinyldihydro-2H-pyran-3(4H)-one. The resulting racemic cis- and trans-linalool oxides were resolved through an enzyme-mediated acetylation procedure. More specifically, we found that Candida rugosa lipase and lipase PS are the catalysts of choice for the resolution of cis- and trans-linalool oxide, respectively.
{"title":"Lipase mediated resolution of cis- and trans-linalool oxide (pyranoid)","authors":"Stefano Serra , Davide De Simeis , Elisabetta Brenna","doi":"10.1016/j.molcatb.2017.03.004","DOIUrl":"10.1016/j.molcatb.2017.03.004","url":null,"abstract":"<div><p>The four isomeric forms of the flavour linalool oxide (pyranoid) were synthesized starting from the inexpensive monoterpene terpinolene. The key steps of the process include <em>m</em>CPBA epoxidation of the starting diene, alumina-catalysed rearrangement of the obtained diepoxide and the diastereoselective reduction of the ketone 2,2,6-trimethyl-6-vinyldihydro-2<em>H</em>-pyran-3(4<em>H</em>)-one. The resulting racemic <em>cis-</em> and <em>trans</em>-linalool oxides were resolved through an enzyme-mediated acetylation procedure. More specifically, we found that <em>Candida rugosa</em> lipase and lipase PS are the catalysts of choice for the resolution of <em>cis</em>- and <em>trans</em>-linalool oxide, respectively.</p></div>","PeriodicalId":16416,"journal":{"name":"Journal of Molecular Catalysis B-enzymatic","volume":"133 ","pages":"Pages S420-S425"},"PeriodicalIF":0.0,"publicationDate":"2016-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.molcatb.2017.03.004","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"84305120","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2016-11-01Epub Date: 2016-11-09DOI: 10.1016/j.molcatb.2016.10.018
Sabine Pils , Kordula Schnabl , Silvia Wallner , Marko Kljajic , Nina Kupresanin , Rolf Breinbauer , Michael Fuchs , Raquel Rocha , Joerg H. Schrittwieser , Wolfgang Kroutil , Bastian Daniel , Peter Macheroux
Monolignol oxidoreductases from the berberine bridge enzyme-like (BBE-like) protein family (pfam 08031) catalyze the oxidation of monolignols to the corresponding aldehydes. In this report, we explore the potential of a monolignol oxidoreductase from Arabidopsis thaliana (AtBBE-like protein 15) as biocatalyst for oxidative reactions. For this study we employed a variant with enhanced reactivity towards oxygen, which was obtained by a single amino acid exchange (L182V). The pH and temperature optima of the purified AtBBE-like protein 15 L182V were determined as well as the tolerance toward organic co-solvents; furthermore the substrate scope was characterized. The enzyme has a temperature optimum of 50 °C and retains more than 50% activity between pH 5 and pH 10 within 5 min. The enzyme shows increased activity in the presence of various co-solvents (10–50% v/v), including acetonitrile, 2-propanol, 1,4-dioxane, and dimethyl sulfoxide. Primary benzylic and primary or secondary allylic alcohols were accepted as substrates. The enantioselectivity E in the oxidation of secondary alcohols was good to excellent (E>34 to >200).
{"title":"Characterization of the monolignol oxidoreductase AtBBE-like protein 15 L182V for biocatalytic applications","authors":"Sabine Pils , Kordula Schnabl , Silvia Wallner , Marko Kljajic , Nina Kupresanin , Rolf Breinbauer , Michael Fuchs , Raquel Rocha , Joerg H. Schrittwieser , Wolfgang Kroutil , Bastian Daniel , Peter Macheroux","doi":"10.1016/j.molcatb.2016.10.018","DOIUrl":"10.1016/j.molcatb.2016.10.018","url":null,"abstract":"<div><p>Monolignol oxidoreductases from the berberine bridge enzyme-like (BBE-like) protein family (pfam 08031) catalyze the oxidation of monolignols to the corresponding aldehydes. In this report, we explore the potential of a monolignol oxidoreductase from <em>Arabidopsis thaliana</em> (<em>At</em>BBE-like protein 15) as biocatalyst for oxidative reactions. For this study we employed a variant with enhanced reactivity towards oxygen, which was obtained by a single amino acid exchange (L182V). The pH and temperature optima of the purified <em>At</em>BBE-like protein 15 L182V were determined as well as the tolerance toward organic co-solvents; furthermore the substrate scope was characterized. The enzyme has a temperature optimum of 50<!--> <!-->°C and retains more than 50% activity between pH 5 and pH 10 within 5<!--> <!-->min. The enzyme shows increased activity in the presence of various co-solvents (10–50% v/v), including acetonitrile, 2-propanol, 1,4-dioxane, and dimethyl sulfoxide. Primary benzylic and primary or secondary allylic alcohols were accepted as substrates. The enantioselectivity <em>E</em> in the oxidation of secondary alcohols was good to excellent (<em>E</em>>34 to >200).</p></div>","PeriodicalId":16416,"journal":{"name":"Journal of Molecular Catalysis B-enzymatic","volume":"133 ","pages":"Pages S6-S14"},"PeriodicalIF":0.0,"publicationDate":"2016-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.molcatb.2016.10.018","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"89309986","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2016-11-01Epub Date: 2016-11-30DOI: 10.1016/j.molcatb.2016.11.023
Fengyu Kou , Jing Zhao , Jiao Liu , Jie Shen , Qin Ye , Ping Zheng , Zhimin Li , Jibin Sun , Yanhe Ma
Lysine decarboxylases (LDCs) catalyze the conversion of l-lysine to cadaverine, a highly attractive building block for bio-based polyamides. Due to economic and environmental concerns, LDCs active at elevated pH are highly desirable. In this study, a new LDC from Aliivibrio salmonicida (AsLdc) was discovered, expressed, and characterized. Compared to the LDCs from Escherichia coli, LdcC and CadA, the latter was frequently used for cadaverine production, the purified AsLdc showed much higher activities at alkaline pH 7.0–8.5, for instance, 205.1 U/mg at pH 7.5 with 10 μg/mL enzyme, in comparison to 68.3 and 51.5 U/mg for CadA and LdcC, respectively. The activities of AsLdc and CadA correlated well with the proportions of decamers at the pH range of 5.0–8.5. AsLdc with a melting temperature of 79 °C was more thermostable than CadA (73.6 °C). When used for whole-cell biotransformation of l-lysine to cadaverine at pH 7.5, AsLdc completed the transformation within 7 h while the CadA did only 82.8%. These results indicate the high potential of the new AsLdc for the industrial production of cadaverine.
{"title":"Characterization of a new lysine decarboxylase from Aliivibrio salmonicida for cadaverine production at alkaline pH","authors":"Fengyu Kou , Jing Zhao , Jiao Liu , Jie Shen , Qin Ye , Ping Zheng , Zhimin Li , Jibin Sun , Yanhe Ma","doi":"10.1016/j.molcatb.2016.11.023","DOIUrl":"10.1016/j.molcatb.2016.11.023","url":null,"abstract":"<div><p>Lysine decarboxylases (LDCs) catalyze the conversion of <span>l</span>-lysine to cadaverine, a highly attractive building block for bio-based polyamides. Due to economic and environmental concerns, LDCs active at elevated pH are highly desirable. In this study, a new LDC from <em>Aliivibrio salmonicida</em> (AsLdc) was discovered, expressed, and characterized. Compared to the LDCs from <em>Escherichia coli</em>, LdcC and CadA, the latter was frequently used for cadaverine production, the purified AsLdc showed much higher activities at alkaline pH 7.0–8.5, for instance, 205.1<!--> <!-->U/mg at pH 7.5 with 10<!--> <!-->μg/mL enzyme, in comparison to 68.3 and 51.5<!--> <!-->U/mg for CadA and LdcC, respectively. The activities of AsLdc and CadA correlated well with the proportions of decamers at the pH range of 5.0–8.5. AsLdc with a melting temperature of 79<!--> <!-->°C was more thermostable than CadA (73.6<!--> <!-->°C). When used for whole-cell biotransformation of <span>l</span>-lysine to cadaverine at pH 7.5, AsLdc completed the transformation within 7<!--> <!-->h while the CadA did only 82.8%. These results indicate the high potential of the new AsLdc for the industrial production of cadaverine.</p></div>","PeriodicalId":16416,"journal":{"name":"Journal of Molecular Catalysis B-enzymatic","volume":"133 ","pages":"Pages S88-S94"},"PeriodicalIF":0.0,"publicationDate":"2016-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.molcatb.2016.11.023","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"73458310","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2016-11-01Epub Date: 2017-01-06DOI: 10.1016/j.molcatb.2017.01.005
Rika Matsumoto , Hiroshi Satoh , Makoto Ueda
6-Gingerol ((S)-5-hydroxy-1-(4-hydroxy-3-methoxyphenyl)-3-decanone), the major gingerol present in ginger rhizomes, has been found to prevent fat accumulation and improve blood flow. However, its low solubility in water and strong pungent odor often limit its potential applications such as in functional foods. In order to overcome these disadvantages, we investigated microbial glucosylation of 6-gingerol by the soil bacterium Ensifer sp. M-26. 5-O-α-Glucosylgingerol was found to be produced from a mixture of maltose and 6-gingerol by the action of washed cells of Ensifer sp. M-26. The addition of organic solvents, such as hexane, to the reaction mixture enhanced 5-O-α-glucosylgingerol production. When the microbial reaction was carried out with 1.3 g/L of 6-gingerol and 100 g/L of maltose under optimized conditions, 0.40 g/L of 5-O-α-glucosylgingerol was accumulated in 25 h. The molar yield of 5-O-α-glucosylgingerol was 19.9 mol%.
{"title":"Production of 5-O-α-glucosylgingerol via glucosylation of 6-gingerol by Ensifer sp. M-26","authors":"Rika Matsumoto , Hiroshi Satoh , Makoto Ueda","doi":"10.1016/j.molcatb.2017.01.005","DOIUrl":"10.1016/j.molcatb.2017.01.005","url":null,"abstract":"<div><p>6-Gingerol ((<em>S</em><span>)-5-hydroxy-1-(4-hydroxy-3-methoxyphenyl)-3-decanone), the major gingerol present in ginger rhizomes, has been found to prevent fat accumulation and improve blood flow. However, its low solubility in water and strong pungent odor often limit its potential applications such as in functional foods. In order to overcome these disadvantages, we investigated microbial glucosylation of 6-gingerol by the soil bacterium </span><em>Ensifer</em> sp. M-26. 5-<em>O</em>-α-Glucosylgingerol was found to be produced from a mixture of maltose and 6-gingerol by the action of washed cells of <em>Ensifer</em> sp. M-26. The addition of organic solvents, such as hexane, to the reaction mixture enhanced 5-<em>O</em>-α-glucosylgingerol production. When the microbial reaction was carried out with 1.3<!--> <!-->g/L of 6-gingerol and 100<!--> <!-->g/L of maltose under optimized conditions, 0.40<!--> <!-->g/L of 5-<em>O</em>-α-glucosylgingerol was accumulated in 25<!--> <!-->h. The molar yield of 5-<em>O</em>-α-glucosylgingerol was 19.9<!--> <!-->mol%.</p></div>","PeriodicalId":16416,"journal":{"name":"Journal of Molecular Catalysis B-enzymatic","volume":"133 ","pages":"Pages S200-S203"},"PeriodicalIF":0.0,"publicationDate":"2016-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.molcatb.2017.01.005","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"89263248","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2016-11-01Epub Date: 2016-08-10DOI: 10.1016/j.molcatb.2016.08.004
Nitesh D. Punyapreddiwar, Sangesh P. Zodape, Atul V. Wankhade, Umesh R. Pratap
An efficient, cost effective and environmentally friendly protocol has been developed for the Michael addition of malononitrile on 1,3-diaryl-2-propen-1-ones (Chalcones) using very cheaper, easily available natural catalyst, baker’s yeast. The whole cells of yeast excellently worked in nonaqueous medium, ethanol without decrease in catalytic activity.
{"title":"Conjugate addition of malononitrile on chalcone: Biocatalytic CC bond formation","authors":"Nitesh D. Punyapreddiwar, Sangesh P. Zodape, Atul V. Wankhade, Umesh R. Pratap","doi":"10.1016/j.molcatb.2016.08.004","DOIUrl":"10.1016/j.molcatb.2016.08.004","url":null,"abstract":"<div><p>An efficient, cost effective and environmentally friendly protocol has been developed for the Michael addition of malononitrile on 1,3-diaryl-2-propen-1-ones (Chalcones) using very cheaper, easily available natural catalyst, baker’s yeast. The whole cells of yeast excellently worked in nonaqueous medium, ethanol without decrease in catalytic activity.</p></div>","PeriodicalId":16416,"journal":{"name":"Journal of Molecular Catalysis B-enzymatic","volume":"133 ","pages":"Pages 124-126"},"PeriodicalIF":0.0,"publicationDate":"2016-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.molcatb.2016.08.004","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"76575527","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2016-11-01Epub Date: 2017-02-16DOI: 10.1016/j.molcatb.2017.02.007
Shuhong Mao , Lixia Zhang , Zhijiang Ge , Xuerong Wang , Yanqing Li , Xiaoguang Liu , Fei Liu , Fuping Lu
Biotransformation of steroid compounds: androst-4-ene-3, 17-dione (1), 19-nor-4-androstene-3, 17-dione (2), 13β-ethyl-4-gonene-3, 17-dione (3) using Penicillium decumbens as biocatalyst was investigated, and selective hydroxylation of 1–3 was observed. Biotransformation of 1 afforded 1α-hydroxy-androst-4-ene-3, 17-dione (4) and 1α, 6β-dihydroxy-androst-4-ene-3, 17-dione (5). Incubation of 19-nor-4-androstene-3, 17-dione (2) with P. decumbens culture resulted in the isolation of compounds 1α-hydroxy-19-nor-4-androstene-3, 17-dione (6) and 1α, 15β-dihydroxy-19-nor-4-androstene-3, 17-dione (7). Biotransformation of 3 gave one product 1α-hydroxy-13β-ethyl-4-gonene-3, 17-dione (8) at the same condition. The four metabolic products 5–8 were reported for the first time and the identified C1-α hydroxylation reaction of steroid by P. decumbens provides an another possibility to perform chemical modifications on C-1.
{"title":"Microbial hydroxylation of steroids by Penicillium decumbens","authors":"Shuhong Mao , Lixia Zhang , Zhijiang Ge , Xuerong Wang , Yanqing Li , Xiaoguang Liu , Fei Liu , Fuping Lu","doi":"10.1016/j.molcatb.2017.02.007","DOIUrl":"10.1016/j.molcatb.2017.02.007","url":null,"abstract":"<div><p>Biotransformation of steroid compounds: androst-4-ene-3, 17-dione (<strong>1</strong>), 19-nor-4-androstene-3, 17-dione (<strong>2</strong>), 13β-ethyl-4-gonene-3, 17-dione (<strong>3</strong>) using <em>Penicillium decumbens</em> as biocatalyst was investigated, and selective hydroxylation of <strong>1</strong>–<strong>3</strong> was observed. Biotransformation of <strong>1</strong> afforded 1α-hydroxy-androst-4-ene-3, 17-dione (<strong>4</strong>) and 1α, 6β-dihydroxy-androst-4-ene-3, 17-dione (<strong>5</strong>). Incubation of 19-nor-4-androstene-3, 17-dione (<strong>2</strong>) with <em>P. decumbens</em> culture resulted in the isolation of compounds 1α-hydroxy-19-nor-4-androstene-3, 17-dione (<strong>6</strong>) and 1α, 15β-dihydroxy-19-nor-4-androstene-3, 17-dione (<strong>7</strong>). Biotransformation of <strong>3</strong> gave one product 1α-hydroxy-13β-ethyl-4-gonene-3, 17-dione (<strong>8</strong>) at the same condition. The four metabolic products <strong>5</strong>–<strong>8</strong> were reported for the first time and the identified C1-α hydroxylation reaction of steroid by <em>P. decumbens</em> provides an another possibility to perform chemical modifications on C-1.</p></div>","PeriodicalId":16416,"journal":{"name":"Journal of Molecular Catalysis B-enzymatic","volume":"133 ","pages":"Pages S346-S351"},"PeriodicalIF":0.0,"publicationDate":"2016-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.molcatb.2017.02.007","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"77253450","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2016-11-01Epub Date: 2017-01-24DOI: 10.1016/j.molcatb.2017.01.016
Ummuhan Cakmak, Nagihan Saglam Ertunga
The xylanase gene (xynTF16) from a thermophilic bacterium Geobacillus sp. TF16 was cloned into pET-28a(+) vector and expressed in Escherichia coli BL21(DE3)pLysS. Recombinant enzyme (GsXynTF16) was purified 52-fold by nickel affinity chromatography, and determined as a single band 39.8 kDa on SDS-PAGE with a specific activity of 246 U/mg protein. The recombinant enzyme was immobilized on chitosan with a yield of 85.6%. The enzyme showed the highest activity towards xylan. The immobilized enzyme displayed an increase in optimum temperature from 55 to 65 °C in comparison with free enzyme. While the free enzyme was optimally active at pH 8.5, immobilized enzyme showed higher activity in the pH range 6.0–8.5. Thermal and pH stability of immobilized enzyme was determined to be higher than that of the free enzyme. Immobilized xylanase could be reused for 6 consecutive cycles retaining 80% of its initial activity. It was also found to be effective in releasing the reducing sugar from juice and poultry feed and oven spring in bakery. These results suggest that this study provides an alternative xylanase enzyme with enhanced properties.
{"title":"Gene cloning, expression, immobilization and characterization of endo-xylanase from Geobacillus sp. TF16 and investigation of its industrial applications","authors":"Ummuhan Cakmak, Nagihan Saglam Ertunga","doi":"10.1016/j.molcatb.2017.01.016","DOIUrl":"10.1016/j.molcatb.2017.01.016","url":null,"abstract":"<div><p><span>The xylanase gene (</span><em>xyn</em>TF16) from a thermophilic bacterium <em>Geobacillus</em> sp. TF16 was cloned into pET-28a(+) vector and expressed in <em>Escherichia coli</em> BL21(DE3)pLysS. Recombinant enzyme (GsXynTF16) was purified 52-fold by nickel affinity chromatography, and determined as a single band 39.8<!--> <!-->kDa on SDS-PAGE with a specific activity of 246<!--> <!-->U/mg protein. The recombinant enzyme was immobilized on chitosan with a yield of 85.6%. The enzyme showed the highest activity towards xylan. The immobilized enzyme displayed an increase in optimum temperature from 55 to 65<!--> <!-->°C in comparison with free enzyme. While the free enzyme was optimally active at pH 8.5, immobilized enzyme showed higher activity in the pH range 6.0–8.5. Thermal and pH stability of immobilized enzyme was determined to be higher than that of the free enzyme. Immobilized xylanase could be reused for 6 consecutive cycles retaining 80% of its initial activity. It was also found to be effective in releasing the reducing sugar from juice and poultry feed and oven spring in bakery. These results suggest that this study provides an alternative xylanase enzyme with enhanced properties.</p></div>","PeriodicalId":16416,"journal":{"name":"Journal of Molecular Catalysis B-enzymatic","volume":"133 ","pages":"Pages S288-S298"},"PeriodicalIF":0.0,"publicationDate":"2016-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.molcatb.2017.01.016","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"89275043","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2016-11-01Epub Date: 2017-01-09DOI: 10.1016/j.molcatb.2017.01.008
Yang-Yang Guo , Xiao-Wei Yu , Yan Xu
Thermophilic enzymes have attracted widespread attention due to their unique characteristics such as temperature, solvent, and pH stability. In this study, two novel esterases were identified in hyperthermophilic bacterium Aquifex aeolicus VF5 based on the typical characteristics of lipolytic enzymes. Two genes, Aaeo1 and Aaeo2 encoded 207 and 226 amino acids respectively, were synthesized after optimization according to the P. pastoris codon preferences. Using sequence alignment and phylogenetic analysis, Aaeo1 and Aaeo2, were classified into the bacterial lipolytic enzyme family VIII and V, respectively. Two genes were cloned and expressed in P. pastoris cells, and the recombinant enzymes were purified from culture supernatants by Ni2+-NTA affinity chromatography and characterized. The optimum temperatures of Aaeo1 and Aaeo2 were 80 °C and 85 °C, respectively, and both of the optimal pH was 8.0. Aaeo1 had the activity preference both to short and long chain p-nitrophenyl esters and triacylglycerides, and the Km and kcat of the best substrate, p-nitrophenyl butyrate (p-NPC4) were 5.11 ± 0.31 mM and 16.12 ± 2.32 s−1, respectively. While Aaeo2 only displayed high activity towards short chain p-nitrophenyl esters, p-nitrophenyl butyrate (p-NPC4), and exhibited Km and kcat of 0.79 ± 0.03 mM and 3.59 ± 1.15 s−1, respectively. The activities of both esterases were inhibited by PMSF, DEPC, and EDTA, but were activated by DTT. The two esterases exhibited certain tolerance to various organic solvents and some detergents. These characteristics make them very promising for the industrial application.
{"title":"Cloning, expression and characterization of two thermostable esterases from Aquifex aeolicus VF5","authors":"Yang-Yang Guo , Xiao-Wei Yu , Yan Xu","doi":"10.1016/j.molcatb.2017.01.008","DOIUrl":"10.1016/j.molcatb.2017.01.008","url":null,"abstract":"<div><p>Thermophilic enzymes have attracted widespread attention due to their unique characteristics such as temperature, solvent, and pH stability. In this study, two novel esterases were identified in hyperthermophilic bacterium <em>Aquifex aeolicus</em> VF5 based on the typical characteristics of lipolytic enzymes. Two genes, <em>Aaeo1</em> and <em>Aaeo2</em> encoded 207 and 226 amino acids respectively, were synthesized after optimization according to the <em>P. pastoris</em> codon preferences. Using sequence alignment and phylogenetic analysis, Aaeo1 and Aaeo2, were classified into the bacterial lipolytic enzyme family VIII and V, respectively. Two genes were cloned and expressed in <em>P. pastoris</em> cells, and the recombinant enzymes were purified from culture supernatants by Ni<sup>2+</sup>-NTA affinity chromatography and characterized. The optimum temperatures of Aaeo1 and Aaeo2 were 80<!--> <!-->°C and 85<!--> <!-->°C, respectively, and both of the optimal pH was 8.0. Aaeo1 had the activity preference both to short and long chain <em>p</em>-nitrophenyl esters and triacylglycerides, and the <em>K</em><sub>m</sub> and <em>k</em><sub>cat</sub> of the best substrate, <em>p</em>-nitrophenyl butyrate (<em>p</em>-NPC<sub>4</sub>) were 5.11<!--> <!-->±<!--> <!-->0.31<!--> <!-->mM and 16.12<!--> <!-->±<!--> <!-->2.32<!--> <!-->s<sup>−1</sup>, respectively. While Aaeo2 only displayed high activity towards short chain <em>p</em>-nitrophenyl esters, <em>p</em>-nitrophenyl butyrate (<em>p</em>-NPC<sub>4</sub>), and exhibited <em>K</em><sub>m</sub> and <em>k</em><sub>cat</sub> of 0.79<!--> <!-->±<!--> <!-->0.03<!--> <!-->mM and 3.59<!--> <!-->±<!--> <!-->1.15<!--> <!-->s<sup>−1</sup>, respectively. The activities of both esterases were inhibited by PMSF, DEPC, and EDTA, but were activated by DTT. The two esterases exhibited certain tolerance to various organic solvents and some detergents. These characteristics make them very promising for the industrial application.</p></div>","PeriodicalId":16416,"journal":{"name":"Journal of Molecular Catalysis B-enzymatic","volume":"133 ","pages":"Pages S220-S229"},"PeriodicalIF":0.0,"publicationDate":"2016-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.molcatb.2017.01.008","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"75662868","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2016-11-01Epub Date: 2017-01-16DOI: 10.1016/j.molcatb.2017.01.009
Noraziah Abu Yazid, Raquel Barrena, Antoni Sánchez
Alkaline proteases produced from protein-rich waste (hair waste and soya residues) by solid state fermentation (SSF) were immobilised onto functionalized magnetic iron oxide nanoparticles (MNPs) using glutaraldehyde as a crosslinking agent. The covalent binding method had a better immobilisation yield compared to simple adsorption, retaining 93%–96% (459 ± 106 U/mg nanoparticles, 319 ± 34 U/mg nanoparticles) of hair waste and soya residues proteases, respectively after crosslinking with 5% glutaraldehyde for 6 h. However, the adsorption immobilisation yield was 47%–54% after 8 h for both proteases. MNPs and immobilised proteases were characterized using transmission electron microscopy (TEM), scanning electron microscopy (SEM), Fourier transform infrared spectroscopy (FT-IR) and electron diffraction. Our results indicated successful crosslinking between the proteases and amino-functionalized MNPs. The operational stability (pH and temperature) and storage stability of free and immobilised enzyme were also analysed. Despite the fact that the optimum pH of free and immobilised proteases was identical in the alkaline region, the immobilised proteases reached their optimum condition at higher temperatures (40 °C–60 °C). After 2 months of storage at 4 °C, the immobilised proteases showed good stability, retaining more than 85% of their initial activity. The high magnetic response of MNPs render an ease of separation and reusability, which contributes to the residual activity of both immobilised proteases on MNPs retaining more than 60% of their initial values after seven hydrolytic cycles. These results showed the enhancement of the stability of the crosslinking interactions between the proteases and nanoparticles. The immobilised proteases were capable of hydrolysing selected proteins (casein, oat bran protein isolate, and egg white albumin). However, differences in the degree of hydrolysis were observed, depending on the combination of the protease and type of substrate used.
{"title":"The immobilisation of proteases produced by SSF onto functionalized magnetic nanoparticles: Application in the hydrolysis of different protein sources","authors":"Noraziah Abu Yazid, Raquel Barrena, Antoni Sánchez","doi":"10.1016/j.molcatb.2017.01.009","DOIUrl":"10.1016/j.molcatb.2017.01.009","url":null,"abstract":"<div><p>Alkaline proteases produced from protein-rich waste (hair waste and soya residues) by solid state fermentation (SSF) were immobilised onto functionalized magnetic iron oxide nanoparticles (MNPs) using glutaraldehyde as a crosslinking agent. The covalent binding method had a better immobilisation yield compared to simple adsorption, retaining 93%–96% (459<!--> <!-->±<!--> <!-->106<!--> <!-->U/mg nanoparticles, 319<!--> <!-->±<!--> <!-->34<!--> <!-->U/mg nanoparticles) of hair waste and soya residues proteases, respectively after crosslinking with 5% glutaraldehyde for 6<!--> <!-->h. However, the adsorption immobilisation yield was 47%–54% after 8<!--> <!-->h for both proteases. MNPs and immobilised proteases were characterized using transmission electron microscopy (TEM), scanning electron microscopy (SEM), Fourier transform infrared spectroscopy (FT-IR) and electron diffraction. Our results indicated successful crosslinking between the proteases and amino-functionalized MNPs. The operational stability (pH and temperature) and storage stability of free and immobilised enzyme were also analysed. Despite the fact that the optimum pH of free and immobilised proteases was identical in the alkaline region, the immobilised proteases reached their optimum condition at higher temperatures (40<!--> <!-->°C–60<!--> <!-->°C). After 2 months of storage at 4<!--> <!-->°C, the immobilised proteases showed good stability, retaining more than 85% of their initial activity. The high magnetic response of MNPs render an ease of separation and reusability, which contributes to the residual activity of both immobilised proteases on MNPs retaining more than 60% of their initial values after seven hydrolytic cycles. These results showed the enhancement of the stability of the crosslinking interactions between the proteases and nanoparticles. The immobilised proteases were capable of hydrolysing selected proteins (casein, oat bran protein isolate, and egg white albumin). However, differences in the degree of hydrolysis were observed, depending on the combination of the protease and type of substrate used.</p></div>","PeriodicalId":16416,"journal":{"name":"Journal of Molecular Catalysis B-enzymatic","volume":"133 ","pages":"Pages S230-S242"},"PeriodicalIF":0.0,"publicationDate":"2016-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.molcatb.2017.01.009","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"85640500","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2016-11-01Epub Date: 2017-01-27DOI: 10.1016/j.molcatb.2017.01.018
Kai Huang, Tao Zhang, Bo Jiang, Wanmeng Mu, Ming Miao
l-Ornithine, a non-protein amino acid, is widely used as a food supplement and nutrition product that is usually produced by the enzymatic hydrolysis of l-arginine. However, urea, a by-product, complicates purification of l-ornithine. Here, we describe a highly efficient coupled system, which involves Rummeliibacillus pycnus arginase and Jack bean urease, for the production of l-ornithine without urea residue. Although R. pycnus arginase exhibited the highest enzyme activity at pH 9.5 with Mn2+, it could be activated by Ni2+ at 70 °C and pH 6.5. Kinetic study showed that, compared with Mn2+-containing arginase, Ni2+-containing arginase had a higher substrate affinity and catalysis efficiency. Based on the properties of commercial Jack bean urease and recombinant arginase, both enzymes showed robust activity at pH 6.5 and 40–50 °C. Using a coupled system involving arginase and urease for bioconversion, l-ornithine production of 37.8 g l−1 was achieved with a 99.7% molar yield within 5 h. Thus, this coupled system represents an applicable strategy for the biosynthesis of l-ornithine.
l-鸟氨酸是一种非蛋白质氨基酸,被广泛用作食品补充剂和营养品,通常由l-精氨酸酶解产生。然而,副产品尿素使l-鸟氨酸的纯化变得复杂。在此,我们描述了一种高效的偶联系统,该系统涉及pycnus Rummeliibacillus arginase和Jack bean脲酶,用于生产l-鸟氨酸而不产生尿素残留。虽然在pH为9.5的Mn2+条件下,红毛鼠精氨酸酶的活性最高,但在70°C和pH为6.5的Ni2+条件下,它也能被激活。动力学研究表明,与含Mn2+的精氨酸酶相比,含Ni2+的精氨酸酶具有更高的底物亲和力和催化效率。根据商业豆角脲酶和重组精氨酸酶的特性,这两种酶在pH 6.5和40-50°C条件下都具有很强的活性。利用精氨酸酶和脲酶的偶联系统进行生物转化,在5 h内以99.7%的摩尔产率实现了37.8 g l−1的l-鸟氨酸生产。因此,该偶联系统代表了一种适用于l-鸟氨酸生物合成的策略。
{"title":"A coupled system involving arginase and urease for l-ornithine production","authors":"Kai Huang, Tao Zhang, Bo Jiang, Wanmeng Mu, Ming Miao","doi":"10.1016/j.molcatb.2017.01.018","DOIUrl":"10.1016/j.molcatb.2017.01.018","url":null,"abstract":"<div><p><span>l</span>-Ornithine, a non-protein amino acid, is widely used as a food supplement and nutrition product that is usually produced by the enzymatic hydrolysis of <span>l</span>-arginine. However, urea, a by-product, complicates purification of <span>l</span>-ornithine. Here, we describe a highly efficient coupled system, which involves <em>Rummeliibacillus pycnus</em> arginase and Jack bean urease, for the production of <span>l</span>-ornithine without urea residue. Although <em>R. pycnus</em> arginase exhibited the highest enzyme activity at pH 9.5 with Mn<sup>2+</sup>, it could be activated by Ni<sup>2+</sup> at 70<!--> <!-->°C and pH 6.5. Kinetic study showed that, compared with Mn<sup>2+</sup>-containing arginase, Ni<sup>2+</sup>-containing arginase had a higher substrate affinity and catalysis efficiency. Based on the properties of commercial Jack bean urease and recombinant arginase, both enzymes showed robust activity at pH 6.5 and 40–50<!--> <!-->°C. Using a coupled system involving arginase and urease for bioconversion, <span>l</span>-ornithine production of 37.8<!--> <!-->g<!--> <!-->l<sup>−1</sup> was achieved with a 99.7% molar yield within 5<!--> <!-->h. Thus, this coupled system represents an applicable strategy for the biosynthesis of <span>l</span>-ornithine.</p></div>","PeriodicalId":16416,"journal":{"name":"Journal of Molecular Catalysis B-enzymatic","volume":"133 ","pages":"Pages S303-S310"},"PeriodicalIF":0.0,"publicationDate":"2016-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.molcatb.2017.01.018","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"79282680","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}