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Effect of Radopholus similis, Pratylenchus araucensis, Meloidogyne spp. and their interaction on Musa AAB 'Dominico Hartón' seedlings. 相似瓢虫、阿劳扇叶瓢虫、Meloidogyne及其互作对Musa AAB 'Dominico Hartón'幼苗的影响
IF 1.3 4区 生物学 Q2 ZOOLOGY Pub Date : 2023-11-24 eCollection Date: 2023-02-01 DOI: 10.2478/jofnem-2023-0054
O A Guzmán-Piedrahita, C Zamorano-Montañez, J Leguizamon-Caycedo, B L Castro-Caicedo, H D Lopez-Nicora

The effect of Radopholus similis, Pratylenchus araucensis, Meloidogyne spp., and their interaction was evaluated in seedlings of Musa AAB 'Dominico Hartón'. The study was conducted in a nursery in Palestina, Caldas department, Colombia. Forty-day-old plantain seedlings were infected separately with 750, 1,500, 2,250 and 3,000 of each species of nematodes/plant. Two experiments were conducted to evaluate the damage of R. similis, P. araucensis, Meloidogyne spp. and the mixture of 750 R. similis + 750 P. araucensis + 750 Meloidogyne spp. compared with the mixture of different proportions (1,500, 2,250 and 3,000 of each species of nematodes). Noninfected plants were included as a control treatment, for a total of 17 treatments in a randomized complete block design with ten replications. Twelve weeks after inoculation, all nematodes, both alone and in combination, reduced (p < 0.05) plantain dry root and shoot weight. In two experiments, R. similis, P. araucensis, and Meloidogyne spp. alone, each with a population density of 3,000, reduced (p < 0.05) root dry weight by 32.5%, 9.5% and 49%, respectively, and decreased (p < 0.05) shoot dry weight by 21.5%, 23%, and 31.5%, respectively, compared to the control. The interaction of nematodes with the lowest population decreased root (33%) and shoot (21%) weight. We conclude that the growth of 'Dominico Hartón' seedlings was affected by plant-parasitic nematodes, but the greatest damage occurred with concomitant nematode infection.

以Musa AAB 'Dominico Hartón'苗木为研究材料,评价了相似瓢虫(Radopholus similis)、阿劳扇叶瓢虫(Pratylenchus araucensis)、Meloidogyne spp及其交互作用。这项研究是在哥伦比亚卡尔达斯省巴勒斯坦的一个托儿所进行的。40日龄车前草幼苗分别感染750、1500、2250和3000种线虫/株。通过2个试验,对比不同比例(每种线虫1500、2250和3000)的混合线虫对相似圆背线虫、阿aucensis、Meloidogyne和750个相似圆背线虫+ 750个阿aucensis + 750个Meloidogyne的危害。未感染植物作为对照处理,采用随机完全区组设计,共17个处理,10个重复。接种12周后,所有线虫单独和组合均降低了车前草干根和干枝重(p < 0.05)。在2个试验中,在种群密度为3000的情况下,单独处理的similis、araucensis和Meloidogyne的根干重分别比对照降低了32.5%、9.5%和49% (p < 0.05),地上部干重分别比对照降低了21.5%、23%和31.5% (p < 0.05)。最小种群线虫的交互作用使根重减少33%,地上部重减少21%。结果表明,寄生线虫对Dominico Hartón幼苗生长有一定的影响,但寄生线虫对Dominico幼苗的危害最大。
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引用次数: 0
Parasite load effects on sex ratio, size, survival and mating fitness of Heleidomermis magnapapula in Culicoides sonorensis. 寄生物负荷对库蠓性比、大小、存活率和交配适合度的影响
IF 1.4 4区 生物学 Q2 ZOOLOGY Pub Date : 2023-11-23 eCollection Date: 2023-02-01 DOI: 10.2478/jofnem-2023-0052
Bradley A Mullens, Katherine A Luhring

Heleidomermis magnapapula parasitizes the blood-feeding midge Culicoides sonorensis. Most (84%) single mermithid infective second stage juveniles (J2) developed into adult females, while parasitism by multiple J2 yielded 97% male adults. Nematodes emerged from the midge larval host as adults and mated immediately; females were ovoviviparous. Host larvae were exposed to nematode J2 and examined intact microscopically to score initial parasite load. Midge hosts were reared individually. Premature midge death, nematode survival within the host, and emerging adult nematode sex ratio and size as a function of load and host size were all tracked. Higher nematode loads produced smaller adult nematode males. The higher loads also increased and accelerated premature host death. Emergence of > 7-9 adult nematode males was rare, but up to 19 tiny males emerged from a single host. Larger midges supported higher parasite loads and a larger total volume of emerged nematode biomass. Virgin adult nematode males then were paired with females of variable, known sizes (volume) and held to determine size effects on fertility (egg hatch), and male survival (longevity). Tested adult males ranged in size from 0.0025 - 0.0334 mm3 and females from 0.0121 - 0.1110 mm3. Logistic regression indicated female nematode fertility was positively influenced by male nematode size, while nematode load and female nematode size had no significant effect. While fertility was reduced statistically in smaller males, even some of the smallest male and female individuals could be fertile. Findings are related to field studies in this system.

magnapapula寄生于吸血蠓Culicoides sonoensis。绝大多数(84%)感染单梭子虫的第二阶段幼虫(J2)发育为成年雌虫,而多梭子虫寄生的97%发育为成年雄虫。线虫从蠓幼虫寄主中发育为成虫并立即交配;雌性是卵胎生的。将寄主幼虫暴露于线虫J2中,并在显微镜下检查完整的寄主幼虫,以记录初始寄生虫负荷。蚊宿主是单独饲养的。追踪了蠓的过早死亡、寄主内线虫的存活以及成虫的性别比例和大小与负荷和寄主大小的关系。较高的线虫负荷产生较小的成年线虫雄虫。较高的负荷也增加和加速了宿主的过早死亡。> 7-9只的成虫雄虫很少出现,但在单个寄主中可出现19只小雄虫。较大的蠓支持较高的寄生虫负荷和较大的出现线虫生物量总量。然后将未交配的成年线虫雄虫与不同大小(体积)的雌虫配对,以确定大小对生殖力(卵孵化)和雄虫存活率(寿命)的影响。受测试的成年雄性的尺寸范围为0.0025 - 0.0334毫米3,雌性为0.0121 - 0.1110毫米3。Logistic回归结果表明,雌线虫的生育能力受雄线虫大小的影响,而线虫负荷和雌线虫大小对其生育能力无显著影响。虽然体型较小的雄性动物的生育能力在统计上有所降低,但即使是一些体型最小的雄性和雌性个体也可能具有生育能力。研究结果与该系统的实地研究有关。
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引用次数: 0
Entomopathogenic Nematode Compatibility with Vineyard Fungicides. 昆虫病原线虫与葡萄园杀菌剂的相容性。
IF 1.3 4区 生物学 Q2 ZOOLOGY Pub Date : 2023-11-23 eCollection Date: 2023-02-01 DOI: 10.2478/jofnem-2023-0057
Raquel Campos-Herrera, Elizabeth Carpentero, Miguel Puelles, José Luis Ramos Sáez de Ojer, Rubén Blanco Pérez

Vineyards, covering over seven million hectares worldwide, hold significant socio-cultural importance. Traditionally reliant on conventional practices and agrochemicals, this agroecosystem faces environmental challenges, including soil and water pollution. Sustainable viticulture, driven by eco-friendly practices and cost reduction, has gained prominence, underlining the importance of biological control agents such as entomopathogenic nematodes (EPNs). EPNs naturally occurr in vineyard soils and play a crucial role in controlling pest damage. Ensuring compatibility between EPNs and the commonly used vineyard fungicides is critical, as these applications constitute the predominant pest-management practice during the productive grapevine cycle. This study assessed the impact of authorized grapevine fungicides on EPNs, focusing on the survival of populations and sublethal effects on their virulence. We investigated the compatibility of two EPN populations (Steinernema feltiae 107 and S. carpocapsae 'All') with three organic production-approved products (Bacillus pumilus, sulfur, and copper oxychloride) and two synthetic chemicals (Trifloxystrobin and Mancozeb). Our findings revealed that the viability of S. feltiae 107 was reduced when exposed to sulfur and copper oxychloride, and its virulence was affected by copper oxychloride and Mancozeb, although only two days after exposure and with no significant differences for larval mortality at five days. In contrast, S. carpocapsae 'All' exhibited full compatibility with all five fungicides, with no impact on its viability or virulence. Consequently, our results suggested that the evaluated fungicides could be co-applied on both EPN populations if they were employed on the same day. However, further research on multi-target interactions is needed to ensure the successful implementation of this kind of co-application.

全球葡萄园面积超过700万公顷,具有重要的社会文化意义。由于传统上依赖传统做法和农用化学品,这种农业生态系统面临着包括土壤和水污染在内的环境挑战。在生态友好和降低成本的推动下,可持续葡萄栽培日益受到重视,这凸显了昆虫病原线虫(EPNs)等生物防治剂的重要性。epn天然存在于葡萄园土壤中,在防治虫害中起着至关重要的作用。确保epn与常用的葡萄园杀菌剂之间的兼容性至关重要,因为这些应用构成了葡萄生产周期中主要的害虫管理实践。本研究评估了授权的葡萄杀菌剂对epn的影响,重点是种群的存活和对其毒力的亚致死效应。我们研究了两个EPN群体(Steinernema feltiae 107和S. carpocapsae 'All)与三种有机生产批准产品(杆状芽孢杆菌、硫和氯化铜)和两种合成化学品(Trifloxystrobin和Mancozeb)的相容性。结果表明,硫和氯化氧化铜对S. feltiae 107的生存能力有降低作用,氯化氧化铜和代锰锌对其毒力有影响,但作用时间仅为2天,5天的幼虫死亡率无显著差异。相反,S. carpocapsae 'All'与所有5种杀菌剂表现出完全的相容性,对其生存力和毒力没有影响。因此,我们的结果表明,如果在同一天施用,所评价的杀菌剂可以在两个EPN群体上同时施用。然而,为了确保这种协同应用的成功实施,还需要进一步研究多靶点相互作用。
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引用次数: 0
Stringent in-silico identification of putative G-protein-coupled receptors (GPCRs) of the entomopathogenic nematode Heterorhabditis bacteriophora. 昆虫病原性线虫嗜菌异habditis bacteriophora的推定g蛋白偶联受体(gpcr)的严格计算机鉴定。
IF 1.3 4区 生物学 Q2 ZOOLOGY Pub Date : 2023-11-23 eCollection Date: 2023-02-01 DOI: 10.2478/jofnem-2023-0038
Artha Kundu, Nisha Jaiswal, Uma Rao, Vishal Singh Somvanshi

The infective juveniles (IJs) of entomopathogenic nematode (EPN) Heterorhabditis bacteriophora find and infect their host insects in heterogeneous soil ecosystems by sensing a universal host cue (CO2) or insect/plant-derived odorants, which bind to various sensory receptors, including G protein-coupled receptors (GPCRs). Nematode chemosensory GPCRs (NemChRs) bind to a diverse set of ligands, including odor molecules. However, there is a lack of information on the NemChRs in EPNs. Here we identified 21 GPCRs in the H. bacteriophora genome sequence in a triphasic manner, combining various transmembrane detectors and GPCR predictors based on different algorithms, and considering inherent properties of GPCRs. The pipeline was validated by reciprocal BLAST, InterProscan, GPCR-CA, and NCBI CDD search. Functional classification of predicted GPCRs using Pfam revealed the presence of four NemChRs. Additionally, GPCRs were classified into various families based on the reciprocal BLAST approach into a frizzled type, a secretin type, and 19 rhodopsin types of GPCRs. Gi/o is the most abundant kind of G-protein, having a coupling specificity to all the fetched GPCRs. As the 21 GPCRs identified are expected to play a crucial role in the host-seeking behavior, these might be targeted to develop novel insect-pest management strategies by tweaking EPN IJ behavior, or to design novel anthelminthic drugs. Our new and stringent GPCR detection pipeline may also be used to identify GPCRs from the genome sequence of other organisms.

昆虫病原线虫(Heterorhabditis bacteriophora)的侵染幼虫(IJs)在异质土壤生态系统中通过感知宿主信号(CO2)或昆虫/植物来源的气味来发现并感染宿主昆虫,这些气味与多种感觉受体结合,包括G蛋白偶联受体(gpcr)。线虫的化学感觉GPCRs (NemChRs)与多种配体结合,包括气味分子。然而,缺乏关于EPNs中NemChRs的信息。本研究结合多种跨膜检测器和基于不同算法的GPCR预测因子,并考虑GPCR的固有特性,采用三相方法鉴定了21个噬菌体基因组序列中的GPCR。该管道通过BLAST、InterProscan、GPCR-CA和NCBI CDD检索进行验证。使用Pfam对预测的gpcr进行功能分类,发现存在4个NemChRs。此外,基于相互BLAST方法,将gpcr分为不同的家族,包括卷曲型、分泌素型和19种视紫红质型的gpcr。Gi/o是最丰富的一种g蛋白,对所有获得的gpcr都具有偶联特异性。由于鉴定出的21个gpcr预计在寄主寻找行为中发挥关键作用,因此可以通过调整EPN IJ的行为来开发新的害虫管理策略,或者设计新的抗虫药物。我们新的和严格的GPCR检测管道也可用于从其他生物的基因组序列中鉴定GPCR。
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引用次数: 0
First report of barley root-knot nematode, Meloidogyne naasi from turfgrass in Idaho, with multigene molecular characterization. 爱达荷州草坪草大麦根结线虫的多基因分子鉴定首次报道。
IF 1.3 4区 生物学 Q2 ZOOLOGY Pub Date : 2023-11-20 eCollection Date: 2023-02-01 DOI: 10.2478/jofnem-2023-0051
Andrea M Skantar, Zafar A Handoo, Mihail R Kantor, Maria N Hult

Barley root-knot nematode, Meloidogyne naasi Franklin, 1965, is one of the most important pest nematodes infecting monocots (Franklin, 1965). Two-inch core soil samples collected from a golf course in Ada County, Idaho were submitted for identification in November of 2019. A high number of Meloidogyne sp. juveniles were recovered from both soil samples using sieving and decantation followed by the sugar centrifugal flotation method. They were examined by light microscopy, morphometric measurements, and multiple molecular markers, including the ribosomal 28S D2-D3 and intergenic spacer 2 (IGS-2) regions, mitochondrial markers cytochrome oxidase I (COI) and the interval from COII to 16S, and the protein-coding gene Hsp90. Morphometrics as well as BlastN comparisons with other root-knot nematode sequences from GenBank were consistent with identification as M. naasi. Phylogenetic trees inferred from 28S, IGS-2, COI, or Hsp90 alignments each separated the Idaho population into a strongly supported clade with other populations of M. naasi, while the COII-16S interval could not resolve M. naasi from M. minor. This report represents the first morphological and molecular characterization of Meloidogyne naasi from turfgrass in Idaho.

大麦根结线虫,Meloidogyne naasi Franklin, 1965,是单子房最重要的害虫线虫之一(Franklin, 1965)。2019年11月,从爱达荷州阿达县的一个高尔夫球场采集的两英寸核心土壤样本被提交进行鉴定。通过筛分和滗析,再用糖离心浮选的方法,从土壤样品中都回收了大量的甜根线虫幼虫。通过光镜、形态测量和多种分子标记对它们进行检测,包括核糖体28S D2-D3和基因间间隔2 (IGS-2)区域、线粒体标记细胞色素氧化酶I (COI)和COII至16S的间隔,以及蛋白质编码基因Hsp90。形态计量学以及与GenBank中其他根结线虫序列的BlastN比较结果与M. naasi的鉴定一致。从28S、IGS-2、COI或Hsp90序列中推断出的系统发育树分别将爱达荷州人群与其他naasi人群划分为一个强烈支持的分支,而COII-16S区间无法将naasi人群与minor人群区分开来。本文首次报道了来自美国爱达荷州草坪草的美洛根线虫的形态和分子特征。
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引用次数: 0
GABA Immunoreactivity and Pharmacological Effects vary Among Stylet-Bearing Nematodes. GABA的免疫反应性和药理作用在有柱头线虫中存在差异。
IF 1.4 4区 生物学 Q2 ZOOLOGY Pub Date : 2023-11-18 eCollection Date: 2023-02-01 DOI: 10.2478/jofnem-2023-0049
Hannah M Reed, Ziduan Han, Nathan E Schroeder

Plant-parasitic nematodes conduct a series of sophisticated behaviors to complete their life cycles. Among these, locomotion behaviors, including finding the host and migrating to the feeding site, directly affect the success of parasitism. Thus, disrupting locomotion behaviors has the potential to control these parasites. γ-Aminobutyric acid (GABA) is the prominent inhibitory neurotransmitter in nematodes. GABA-immunoreactive neurons are mostly found in motor neurons, where they regulate behaviors in the model nematode C. elegans. However, the GABA system in most stylet-bearing nematodes has received little attention. Using immunohistochemistry, we found variation in the pattern of GABA-immunoreactivity among two major plant-parasites and a fungal feeder. Some of these GABA-immunoreactive neurons lack clear homologs to C. elegans. Pharmaceutical assays showed that applying GABA, its agonist, and its antagonist, can disrupt the locomotion behaviors of these nematodes, although sensitivity to a given compound varied between species. Our data suggest that the GABA system is a potential target for the control of plant-parasitic nematodes.

植物寄生线虫通过一系列复杂的行为来完成它们的生命周期。其中,寻找寄主和迁徙到取食地等运动行为直接影响寄生的成功与否。因此,破坏运动行为有可能控制这些寄生虫。γ-氨基丁酸(GABA)是线虫体内重要的抑制性神经递质。gaba免疫反应神经元主要存在于运动神经元中,它们调节秀丽隐杆线虫的行为。然而,GABA系统在大多数有柱体的线虫中得到的关注很少。利用免疫组织化学,我们发现了两种主要植物-寄生虫和真菌食用者之间gaba免疫反应模式的变化。其中一些gaba免疫反应神经元与秀丽隐杆线虫缺乏明确的同源物。药物试验表明,使用GABA及其激动剂和拮抗剂可以破坏这些线虫的运动行为,尽管对给定化合物的敏感性因物种而异。我们的数据表明,GABA系统是控制植物寄生线虫的潜在靶点。
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引用次数: 0
First reports of Hemicycliophora poranga, Helicotylenchus dihystera and Tylenchorhynchus zeae (Tylenchomorpha) from Greece and further records of four other nematode species. 本文首次报道了希腊的半圆线虫、半圆线虫和玉米线虫(tylenchhynchus zeae)及其他四种线虫的记录。
IF 1.4 4区 生物学 Q2 ZOOLOGY Pub Date : 2023-11-18 eCollection Date: 2023-02-01 DOI: 10.2478/jofnem-2023-0044
Ilenia Clavero-Camacho, Alba N Ruiz-Cuenca, Carolina Cantalapiedra-Navarrete, Antonio Archidona-Yuste, Ioannis Giannakou, Maria Kormpi, Juan E Palomares-Rius, Pablo Castillo, Emmanuel A Tzortzakakis

Nematode samplings in various areas and crops of Greece were carried out and the recovered nematode species were characterized using morphological and molecular data. Seven species of plant-parasitic nematodes were recovered, three of which are reported for the first time in Greece, including Hemicycliophora poranga, Helicotylenchus dihystera and Tylenchorhynchus zeae. Four other recovered species had already been reported in Greece, including Bitylenchus hispaniensis, Helicotylenchus microlobus, Nanidorus minor and Scutellonema brachyurus. D2-D3 segments of 28S rRNA gene for all of these nematode species are provided.

在希腊不同地区和作物中进行了线虫取样,并利用形态和分子数据对恢复的线虫物种进行了表征。共检获植物寄生线虫7种,其中3种为希腊首次报道,分别为半圈线虫(Hemicycliophora poranga)、螺旋线虫(Helicotylenchus dihystera)和玉米线虫(Tylenchorhynchus zeae)。在希腊已经报告了其他四种恢复的物种,包括bisylenchus hispaniensis、Helicotylenchus microlobus、Nanidorus minor和Scutellonema brachyurus。提供了所有这些线虫种类的28S rRNA基因的D2-D3片段。
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引用次数: 0
Morphological, molecular, and histopathological studies on Hadjelia truncata from Columba livia domestica and its role as an environmental biological indicator. 家columba banjelia truncata的形态、分子和组织病理学研究及其环境生物学指示作用。
IF 1.4 4区 生物学 Q2 ZOOLOGY Pub Date : 2023-11-16 eCollection Date: 2023-02-01 DOI: 10.2478/jofnem-2023-0050
Mohammed Albeshr, Rajwa Alsharief, Fatimah Al-Otibi, Esam M Al-Shaebi, Osama B Mohammed, Rewaida Abdel-Gaber

Pigeons are a cosmopolitan group of birds with abundant and large populations associated with human activities. This study focused on determining parasitic infections within domestic pigeons (Columba livia domestica). Forty-eight pigeons were examined for infections, of which 29.16% were infected with a nematode parasite, identified as Hadjelia truncata (Habronematidae), under the koilin layer of their gizzards. The population of nematodes in infected gizzards did not exceed 20 adult worms. DNA from the gizzard worms was extracted and subjected to PCR using primers that amplify the partial 18S rDNA and cytochrome C oxidase subunit I (COX I) regions. Identification of this parasite based on microscopic study revealed the presence of trilobed lips with cephalic papillae and amphidial pores, as well as other characteristic features. In males, spicules were unequal with the presence of six pedunculated pairs of caudal papillae (4 pre- and 2 post-anal) and a tail surrounded with caudal ala. In females, the vulva was a rounded aperture located in front of the posterior end of the esophagus and uteri, which was filled with numerous embryonated eggs. DNA Sequences from partial 18S rDNA were homologous to sequences obtained from H. truncata in GenBank with a high percentage of identity. DNA sequences from mitochondrial gene COX I, however, were unique, and they were the first sequenced for H. truncata, since no sequences for this taxon were previously available in GenBank. Histopathological examination revealed enlargement of infected gizzards in comparison to non-infected ones, with the presence of necrosis and interstitial infiltration in the koilin layer. Concentrations of heavy metals (Fe, Cu, Zn, Cd, Cr, and Co) were measured using inductivity-coupled plasma in tissues (liver, muscles, and gizzards) from infected and non-infected pigeons as well as their parasites. Results showed different affinities of metals to tissues. Recovered parasites can minimize element concentration from their pigeon tissues. In Saudi Arabia, this study was considered the first report identifying pigeon nematodes and evaluating of the effects of their pathogenicity on the animals' welfare, as well as their application as a useful tool for monitoring environmental pollution.

鸽子是一种世界性的鸟类,数量众多,与人类活动有关。本研究的重点是确定家鸽(Columba livia domestica)的寄生虫感染。对48只鸽子进行了感染检查,其中29.16%的鸽子在其砂囊的koilin层下感染了一种被鉴定为hajelia truncata (Habronematidae)的线虫寄生虫。感染沙囊内线虫数量不超过20只成虫。从沙虫中提取DNA,用扩增部分18S rDNA和细胞色素C氧化酶亚基I (COX I)区域的引物进行PCR。显微鉴定发现该寄生虫具有三叶状唇,头状乳头和两向孔,并具有其他特征。雄鱼的针状体不等长,有6对带梗的尾端乳头(4对在肛前,2对在肛后),尾巴被尾鳍包围。雌性的外阴是位于食道后端和子宫前的一个圆形孔,里面充满了许多有胚胎的卵子。其中,部分18S rDNA序列与GenBank中从truncata中获得的序列同源,同源率高。然而,线粒体基因COX - 1的DNA序列是独一无二的,并且它们是第一个对直立猿人进行测序的序列,因为之前在GenBank中没有该分类单元的序列。组织病理学检查显示感染的砂囊比未感染的砂囊增大,koilin层出现坏死和间质浸润。使用电感耦合血浆测量了感染和未感染鸽子及其寄生虫组织(肝脏、肌肉和沙囊)中的重金属(铁、铜、锌、镉、铬和钴)浓度。结果表明,金属对组织的亲和力不同。恢复后的寄生虫可以将鸽子组织中的元素浓度降到最低。在沙特阿拉伯,这项研究被认为是鉴定鸽子线虫并评估其致病性对动物福利的影响的第一份报告,以及它们作为监测环境污染的有用工具的应用。
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引用次数: 0
Nematode Genome Announcement: A Draft Genome of Seed Gall Nematode, Anguina tritici. 线虫基因组公告:种子瘿线虫,Anguina tritici基因组草图。
IF 1.3 4区 生物学 Q2 ZOOLOGY Pub Date : 2023-11-15 eCollection Date: 2023-02-01 DOI: 10.2478/jofnem-2023-0031
Ashish Kumar Singh, Antara Das, Ila Joshi, Manish Kumar, Deshika Kohli, Pankaj, Kishor Gaikwad, Pradeep Kumar Jain, Anil Sirohi

Anguina tritici is the first plant-parasitic nematode described in literature, dating back to the year 1743. It is responsible for causing earcockle (seed gall) and tundu diseases in wheat and rye. Notably, this nematode has been observed to survive in an anhydrobiotic state for up to 32 years within wheat seed galls. These exceptional characteristics have inspired the sequencing of the A. tritici genome. In this study, we present the initial draft genome of A. tritici, obtained using the Illumina MiSeq platform with coverage of 60-fold. The genome is estimated to have a size of 164 Mb and comprises 39,965 protein-coding genes, exhibiting a GC content of 39.1%. The availability of this genome data will serve as a foundation for future functional biological investigations, particularly for genes whose functions remain unknown to this day.

小麦线虫是文献记载的第一种植物寄生线虫,可追溯到1743年。它是造成小麦和黑麦的穗瘿病(种子瘿病)和tundu病的原因。值得注意的是,这种线虫已被观察到在无水状态下在小麦种子瘿中存活长达32年。这些特殊的特征激发了小麦小麦基因组测序的灵感。在这项研究中,我们展示了利用Illumina MiSeq平台获得的小麦小麦(A. tritici)的初始基因组草图,覆盖范围为60倍。据估计,该基因组的大小为164 Mb,包含39,965个蛋白质编码基因,GC含量为39.1%。这些基因组数据的可用性将作为未来功能生物学研究的基础,特别是对于功能至今仍未知的基因。
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引用次数: 0
A New Root-Knot Nematode species, Meloidogyne karsseni n. sp. (Nematoda: Meloidogynidae), From Mexico and a Taxonomic Update on M. paranaensis From Guatemala. 一种新的根结线虫,卡氏根结线虫(Meloidogyne karsseni n.sp.)(线虫目:根结线虫科),来自墨西哥,以及危地马拉paranaensis的分类学更新。
IF 1.3 4区 生物学 Q2 ZOOLOGY Pub Date : 2023-10-21 eCollection Date: 2023-02-01 DOI: 10.2478/jofnem-2023-0042
Phougeishangbam Rolish Singh, Denis Gitonga, Abolfazl Hajihassani, Adriaan Verhage, Eveline van Aalst-Philipse, Marjolein Couvreur, Wim Bert

A new root-knot nematode (RKN) species, Meloidogyne karsseni n. sp., associated with sweet pepper from Mexico, and a population of M. paranaensis from Guatemala, are described using data from morphological, biochemical (isozyme enzymes), molecular, and phylogenetic analyses. Meloidogyne karsseni n. sp. can be morphologically diagnosed using the combined features of the second-stage juveniles, viz. body length (345 to 422 μm), a conical rounded head region, a post-labial annule lacking transverse striation, a thin stylet 11 to 12 μm long, rounded to oval and backwardly sloping knobs, dorsal gland orifice (DGO) at 5.2 to 6.0 μm from the knobs, a hemizonid just above the secretory-excretory (SE) pore, a tapering tail with finely rounded terminus and one or two very weak constrictions at hyaline tail tip; the female characters viz. oval-to-rounded perineal pattern with coarse striation on lateral sides around the anus, low dorsal arch with finer striations, and distinctly visible lateral lines; and the male characteristics viz. a rounded and continuous head, a post-labial annule without transverse striations, a robust stylet 20 to 24 μm long, rounded-to-oval and slightly backwardly sloping knobs, and a DGO at 2.4 to 2.9 μm from the knobs. In all the studied males of M. paranaensis, a characteristic sclerotization around the duct of SE-pore was also observed for the first time. Sequences of 18S, D2-D3 of 28S, and ITS of rDNA, and cox1 of mtDNA were generated for the two species, and in the phylogenetic trees based on these genes, both species appeared in the tropical RKN species complex clade.

利用形态学、生物化学(同功酶)、分子和系统发育分析的数据,描述了一种新的根结线虫(RKN)物种,即与墨西哥甜椒相关的根结根线虫(Meloidogyne karsseni n.sp.)和危地马拉副根线虫(M.paranaensis)种群。卡氏根结线虫(Meloidogyne karsseni n.sp,分泌排泄孔(SE)正上方的半带,末端细圆形的渐缩尾巴,透明尾尖有一到两个非常弱的缩颈;雌性性状为卵圆至圆形会阴部,肛门周围两侧有粗条纹,背弓较低,条纹较细,侧线清晰可见;雄性特征,即圆形和连续的头部,无横向条纹的唇后环,20至24μm长、圆形至椭圆形且略微向后倾斜的结节的坚固探针,以及距结节2.4至2.9μm的DGO。在所有被研究的副aensis雄性中,SE孔导管周围也首次观察到特征性硬化。生成了两个物种的18S、28S的D2-D3、rDNA的ITS和mtDNA的cox1序列,在基于这些基因的系统发育树中,两个物种都出现在热带RKN物种复杂分支中。
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Journal of nematology
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