Hannah M Resetarits, Gal Dishon, Vinayak Agarwal, Jennifer E Smith
The red alga Asparagopsis taxiformis has recently been recognized for its unique ability to significantly reduce methane emissions from ruminant animals when fed in small quantities. The main obstacle in using this seaweed as a methane-mitigating feed supplement is the lack of commercially available biomass. Little is known about how best to grow this red alga on a commercial scale, as there are few published studies that have investigated the factors that influence growth, physiology, and overall performance. This study examined the effects of temperature and CO2 enrichment on the growth, photophysiology, and concentration of bromoform, the secondary metabolite largely responsible for methane reduction in A. taxiformis. A series of single and multifactor closed culture experiments were conducted on A. taxiformis collected, isolated, and cultured from populations in Southern California. We identified the optimal temperature range to be between 22 and 26°C, with significant short-term stress observed below 15°C and above 26°C. Carbon dioxide addition resulted in increased performance, when accounting for growth per CO2 use. In general, we observed the highest bromoform concentrations in algae with the highest growth rates, but these results varied among experiments. These findings indicate that through environmental control and by addressing limiting resources, significant increases in biomass production and quality can be achieved.
{"title":"The effects of temperature and CO<sub>2</sub> enrichment on the red seaweed Asparagopsis taxiformis from Southern California with implications for aquaculture.","authors":"Hannah M Resetarits, Gal Dishon, Vinayak Agarwal, Jennifer E Smith","doi":"10.1111/jpy.13526","DOIUrl":"10.1111/jpy.13526","url":null,"abstract":"<p><p>The red alga Asparagopsis taxiformis has recently been recognized for its unique ability to significantly reduce methane emissions from ruminant animals when fed in small quantities. The main obstacle in using this seaweed as a methane-mitigating feed supplement is the lack of commercially available biomass. Little is known about how best to grow this red alga on a commercial scale, as there are few published studies that have investigated the factors that influence growth, physiology, and overall performance. This study examined the effects of temperature and CO<sub>2</sub> enrichment on the growth, photophysiology, and concentration of bromoform, the secondary metabolite largely responsible for methane reduction in A. taxiformis. A series of single and multifactor closed culture experiments were conducted on A. taxiformis collected, isolated, and cultured from populations in Southern California. We identified the optimal temperature range to be between 22 and 26°C, with significant short-term stress observed below 15°C and above 26°C. Carbon dioxide addition resulted in increased performance, when accounting for growth per CO<sub>2</sub> use. In general, we observed the highest bromoform concentrations in algae with the highest growth rates, but these results varied among experiments. These findings indicate that through environmental control and by addressing limiting resources, significant increases in biomass production and quality can be achieved.</p>","PeriodicalId":16831,"journal":{"name":"Journal of Phycology","volume":" ","pages":"1567-1584"},"PeriodicalIF":2.8,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11670279/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142770054","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-01Epub Date: 2024-10-28DOI: 10.1111/jpy.13508
Brinkley M Thornton, Heather L Spalding, Solenn Stoeckel, Melissa L Harris, Rachael M Wade, Stacy A Krueger-Hadfield
The relative rates of sexual versus asexual reproduction influence the partitioning of genetic diversity within and among populations. During range expansions, asexual reproduction often facilitates colonization and establishment. The arrival of the green alga Avrainvillea lacerata has caused shifts in habitat structure and community assemblages since its discovery in 1981 offshore of O'ahu, Hawai'i. Field observations suggest this species is spreading via vegetative reproduction. To characterize the reproductive system of A. lacerata in Hawai'i, we developed seven microsatellite loci and genotyped 321 blades collected between 2018 and 2023 from three intertidal sites at Maunalua Bay and 'Ewa Beach. We observed one to four alleles at multiple loci, suggesting A. lacerata is tetraploid. Each site was characterized by high genotypic richness (R > 0.8). However, clonal rates were also high, suggesting the vegetative spread of A. lacerata plays a significant role. The importance of clonal reproduction for the persistence of A. lacerata in Hawai'i is consistent with the ecological data collected for this species and observations of other abundant macroalgal invaders in Hawai'i and other regions of the world. These data demonstrate the necessity for implementing appropriate population genetic methods and provide insights into the biology of this alga that will contribute to future studies on effective management strategies incorporating its reproductive system. This study represents one of the few that investigate green algal population genetic patterns and contributes to our understanding of algal reproductive system evolution.
有性生殖与无性生殖的相对比率影响着种群内部和种群之间遗传多样性的分配。在分布区扩张过程中,无性繁殖往往有利于殖民和建立。自 1981 年在夏威夷奥阿胡近海发现绿藻 Avrainvillea lacerata 以来,它的到来已导致栖息地结构和群落组合发生变化。实地观察表明,该物种正在通过无性繁殖进行传播。为了描述 A. lacerata 在夏威夷的繁殖系统特征,我们开发了七个微卫星位点,并对 2018 年至 2023 年期间从 Maunalua 海湾和 'Ewa 海滩的三个潮间带地点采集的 321 片叶片进行了基因分型。我们在多个位点观察到一到四个等位基因,这表明 A. lacerata 是四倍体。每个地点的基因型丰富度都很高(R > 0.8)。然而,克隆率也很高,这表明 A. lacerata 的无性繁殖发挥了重要作用。克隆繁殖对 A. lacerata 在夏威夷的持续存在非常重要,这与为该物种收集的生态数据以及对夏威夷和世界其他地区其他大量大型藻类入侵者的观察结果是一致的。这些数据表明,有必要采用适当的种群遗传方法,并对这种藻类的生物学特性进行深入研究,这将有助于今后结合其繁殖系统开展有效管理策略的研究。这项研究是为数不多的研究绿藻种群遗传模式的研究之一,有助于我们了解藻类生殖系统的进化。
{"title":"Clonality contributes to the spread of Avrainvillea lacerata (Bryopsidales, Chlorophyta) in Hawai'i.","authors":"Brinkley M Thornton, Heather L Spalding, Solenn Stoeckel, Melissa L Harris, Rachael M Wade, Stacy A Krueger-Hadfield","doi":"10.1111/jpy.13508","DOIUrl":"10.1111/jpy.13508","url":null,"abstract":"<p><p>The relative rates of sexual versus asexual reproduction influence the partitioning of genetic diversity within and among populations. During range expansions, asexual reproduction often facilitates colonization and establishment. The arrival of the green alga Avrainvillea lacerata has caused shifts in habitat structure and community assemblages since its discovery in 1981 offshore of O'ahu, Hawai'i. Field observations suggest this species is spreading via vegetative reproduction. To characterize the reproductive system of A. lacerata in Hawai'i, we developed seven microsatellite loci and genotyped 321 blades collected between 2018 and 2023 from three intertidal sites at Maunalua Bay and 'Ewa Beach. We observed one to four alleles at multiple loci, suggesting A. lacerata is tetraploid. Each site was characterized by high genotypic richness (R > 0.8). However, clonal rates were also high, suggesting the vegetative spread of A. lacerata plays a significant role. The importance of clonal reproduction for the persistence of A. lacerata in Hawai'i is consistent with the ecological data collected for this species and observations of other abundant macroalgal invaders in Hawai'i and other regions of the world. These data demonstrate the necessity for implementing appropriate population genetic methods and provide insights into the biology of this alga that will contribute to future studies on effective management strategies incorporating its reproductive system. This study represents one of the few that investigate green algal population genetic patterns and contributes to our understanding of algal reproductive system evolution.</p>","PeriodicalId":16831,"journal":{"name":"Journal of Phycology","volume":" ","pages":"1371-1389"},"PeriodicalIF":2.8,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11670288/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142502634","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The marine cyanobacterium Synecococcus sp. (CCMP 1334) was grown in a continuous culture system on a 12:12 h light:dark cycle at all combinations of low and high pCO2 (400 and 1000 ppmv, respectively), nutrient availability (nitrate-limited and nutrient-replete conditions), and temperatures of 21, 24, 28, 32, and 35°C. The maximum nutrient-replete growth rate was ~1.15 day-1 at 32-35°C. Median nutrient-replete growth rates were higher at 1000 ppmv than at 400 ppmv pCO2 at all temperatures. Carbon:nitrogen ratios were independent of pCO2 at a fixed relative growth rate (i.e., growth rate ÷ nutrient-replete growth rate) but decreased with increasing temperature. Carbon:chlorophyll a ratios were decreased monotonically with increasing temperature and were higher under nitrate-limited than nutrient-replete conditions. Ratios of phycoerythrin to chlorophyll a were independent of growth conditions. Productivity indices were independent of temperature and nutrient limitation but were consistently higher at 1000 ppmv than 400 ppmv pCO2. Both growth rates and dark respiration rates were positively correlated with temperature, and the associated Q10 values were 2.2 and 2.3, respectively. A model of phytoplankton growth in which cellular carbon is allocated to structure, storage, or the light or dark reactions of photosynthesis accounted for the general patterns of cell composition and growth rate. This strain of Synechococcus appears well suited to changes in environmental conditions that are expected as the climate warms in response to anthropogenic emissions of CO2.
在连续培养系统中,在低pCO2和高pCO2(分别为400和1000 ppmv)、营养物质可用性(硝酸盐限制和营养物质充足的条件)和温度为21、24、28、32和35℃的所有组合中,在12:12 h的光:暗循环中培养海洋蓝藻藻藻球菌(CCMP 1334)。在32-35℃条件下,最大的营养物生长速率为~1.15 d -1。在所有温度下,1000 ppmv的中位营养物生长率都高于400 ppmv。碳氮比在固定的相对生长率(即生长率÷富营养化生长率)下不受pCO2影响,但随着温度的升高而降低。碳与叶绿素a比值随温度升高单调降低,硝酸盐限制条件下高于营养充足条件。藻红蛋白与叶绿素a的比值与生长条件无关。产量指标不受温度和养分限制的影响,但在co2浓度为1000 ppmv时均高于co2浓度为400 ppmv时。生长速率和暗呼吸速率均与温度呈正相关,Q10值分别为2.2和2.3。一种浮游植物生长的模型,其中细胞碳被分配到结构、储存或光合作用的明暗反应中,解释了细胞组成和生长速度的一般模式。由于人为二氧化碳排放导致气候变暖,这种聚球菌菌株似乎很适合环境条件的变化。
{"title":"Interactive effects of CO<sub>2</sub>, temperature, and nitrate limitation on the growth and physiology of strain CCMP 1334 of the marine cyanobacterium Synechococcus (Cyanophyceae).","authors":"Alyssa K Sharbaugh, Edward A Laws","doi":"10.1111/jpy.13531","DOIUrl":"https://doi.org/10.1111/jpy.13531","url":null,"abstract":"<p><p>The marine cyanobacterium Synecococcus sp. (CCMP 1334) was grown in a continuous culture system on a 12:12 h light:dark cycle at all combinations of low and high pCO<sub>2</sub> (400 and 1000 ppmv, respectively), nutrient availability (nitrate-limited and nutrient-replete conditions), and temperatures of 21, 24, 28, 32, and 35°C. The maximum nutrient-replete growth rate was ~1.15 day<sup>-1</sup> at 32-35°C. Median nutrient-replete growth rates were higher at 1000 ppmv than at 400 ppmv pCO<sub>2</sub> at all temperatures. Carbon:nitrogen ratios were independent of pCO<sub>2</sub> at a fixed relative growth rate (i.e., growth rate ÷ nutrient-replete growth rate) but decreased with increasing temperature. Carbon:chlorophyll a ratios were decreased monotonically with increasing temperature and were higher under nitrate-limited than nutrient-replete conditions. Ratios of phycoerythrin to chlorophyll a were independent of growth conditions. Productivity indices were independent of temperature and nutrient limitation but were consistently higher at 1000 ppmv than 400 ppmv pCO<sub>2</sub>. Both growth rates and dark respiration rates were positively correlated with temperature, and the associated Q<sub>10</sub> values were 2.2 and 2.3, respectively. A model of phytoplankton growth in which cellular carbon is allocated to structure, storage, or the light or dark reactions of photosynthesis accounted for the general patterns of cell composition and growth rate. This strain of Synechococcus appears well suited to changes in environmental conditions that are expected as the climate warms in response to anthropogenic emissions of CO<sub>2</sub>.</p>","PeriodicalId":16831,"journal":{"name":"Journal of Phycology","volume":" ","pages":""},"PeriodicalIF":2.8,"publicationDate":"2024-11-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142770053","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Beata Bober, Paweł Żmudzki, Ewelina Chrapusta-Srebrny
Cyanobacteria are known for producing a wide array of secondary metabolites, including non-ribosomally synthesized oligopeptides, whose functions remain to be determined. Woronichinia naegeliana, a common component of freshwater blooms, represents an under-explored resource of bioactive oligopeptides. Among these oligopeptides are cyanopeptolin 1081 and anabaenopeptin 899, which have been shown to have adverse effects on zooplankton. The absolute amino acid configuration of these peptides appears typical relative to other cyanopeptolins and anabaenopeptins. To understand their toxic mechanisms, enzyme assays were conducted. The inhibitory activity of cyanopeptolin 1081 and anabaenopeptin 899 was tested against proteases such as chymotrypsin, trypsin, elastase, thrombin, and carboxypeptidase A, resulting in different activities against these enzymes. Cyanopeptolin 1081 inhibited both chymotrypsin and elastase, while anabaenopeptin 899 inhibited carboxypeptidase A but failed to inhibit the other tested enzymes at a concentration of 37 μM. The inhibitory concentration values determined here highlight that these compounds are among the most potent enzyme inhibitors in freshwater-derived cyanopeptides.
{"title":"Occurrence of protease inhibitors in freshwater cyanobacterium Woronichinia naegeliana (Unger) Elenkin.","authors":"Beata Bober, Paweł Żmudzki, Ewelina Chrapusta-Srebrny","doi":"10.1111/jpy.13527","DOIUrl":"https://doi.org/10.1111/jpy.13527","url":null,"abstract":"<p><p>Cyanobacteria are known for producing a wide array of secondary metabolites, including non-ribosomally synthesized oligopeptides, whose functions remain to be determined. Woronichinia naegeliana, a common component of freshwater blooms, represents an under-explored resource of bioactive oligopeptides. Among these oligopeptides are cyanopeptolin 1081 and anabaenopeptin 899, which have been shown to have adverse effects on zooplankton. The absolute amino acid configuration of these peptides appears typical relative to other cyanopeptolins and anabaenopeptins. To understand their toxic mechanisms, enzyme assays were conducted. The inhibitory activity of cyanopeptolin 1081 and anabaenopeptin 899 was tested against proteases such as chymotrypsin, trypsin, elastase, thrombin, and carboxypeptidase A, resulting in different activities against these enzymes. Cyanopeptolin 1081 inhibited both chymotrypsin and elastase, while anabaenopeptin 899 inhibited carboxypeptidase A but failed to inhibit the other tested enzymes at a concentration of 37 μM. The inhibitory concentration values determined here highlight that these compounds are among the most potent enzyme inhibitors in freshwater-derived cyanopeptides.</p>","PeriodicalId":16831,"journal":{"name":"Journal of Phycology","volume":" ","pages":""},"PeriodicalIF":2.8,"publicationDate":"2024-11-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142693235","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Cristina Galobart, Cèlia Sitjà, Sònia de Caralt, Jorge Santamaría, Alba Vergés, Jordi Boada, Emma Cebrian
Marine macroalgae are important primary producers in coastal ecosystems. Within sheltered and shallow bays in the Mediterranean, various Fucalean macroalgae and seagrasses coexist, creating habitats of high ecological importance. These habitats have historically suffered from various disturbances, and on this basis, active restoration actions have been proposed as potential solutions for their recovery. Here, we assessed the restoration success of a 10-year restored macroalgal forest by evaluating the recovery in terms of oxygen and pH fluxes and comparing those data with those of a healthy marine forest and a degraded habitat counterpart. We estimated the overall changes in dissolved oxygen and pH using light and dark community in situ incubations. We also determined the biomass and composition of macroalgal and macroinvertebrate compartments of each assemblage. During light incubations, the healthy and restored forest assemblages showed similar average net oxygen production, 5.7 times higher than in the degraded one, and a greater increase in pH. More than 95% of the incubated biomass corresponded to macroalgal and seagrass species. The restored forest showed a six-fold increase in biomass, most likely being responsible for the recovery of primary production. This work provides empirical evidence that the restoration of a single structural species, once successful in the early stages, can yield positive results by recovering processes such as primary production and dark respiration. Moreover, these results showcase differences in ecosystem functions between healthy (either mature or restored) and degraded habitats, highlighting the importance of protecting and preserving coastal marine forests.
{"title":"Oxygen and pH fluxes in shallow bay habitats: Evaluating the effectiveness of a macroalgal forest restoration.","authors":"Cristina Galobart, Cèlia Sitjà, Sònia de Caralt, Jorge Santamaría, Alba Vergés, Jordi Boada, Emma Cebrian","doi":"10.1111/jpy.13520","DOIUrl":"10.1111/jpy.13520","url":null,"abstract":"<p><p>Marine macroalgae are important primary producers in coastal ecosystems. Within sheltered and shallow bays in the Mediterranean, various Fucalean macroalgae and seagrasses coexist, creating habitats of high ecological importance. These habitats have historically suffered from various disturbances, and on this basis, active restoration actions have been proposed as potential solutions for their recovery. Here, we assessed the restoration success of a 10-year restored macroalgal forest by evaluating the recovery in terms of oxygen and pH fluxes and comparing those data with those of a healthy marine forest and a degraded habitat counterpart. We estimated the overall changes in dissolved oxygen and pH using light and dark community in situ incubations. We also determined the biomass and composition of macroalgal and macroinvertebrate compartments of each assemblage. During light incubations, the healthy and restored forest assemblages showed similar average net oxygen production, 5.7 times higher than in the degraded one, and a greater increase in pH. More than 95% of the incubated biomass corresponded to macroalgal and seagrass species. The restored forest showed a six-fold increase in biomass, most likely being responsible for the recovery of primary production. This work provides empirical evidence that the restoration of a single structural species, once successful in the early stages, can yield positive results by recovering processes such as primary production and dark respiration. Moreover, these results showcase differences in ecosystem functions between healthy (either mature or restored) and degraded habitats, highlighting the importance of protecting and preserving coastal marine forests.</p>","PeriodicalId":16831,"journal":{"name":"Journal of Phycology","volume":" ","pages":""},"PeriodicalIF":2.8,"publicationDate":"2024-11-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142667948","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Algal highlight: What is in a name? Well…","authors":"Dale Casamatta","doi":"10.1111/jpy.13506","DOIUrl":"10.1111/jpy.13506","url":null,"abstract":"","PeriodicalId":16831,"journal":{"name":"Journal of Phycology","volume":"60 5","pages":"1068-1070"},"PeriodicalIF":2.8,"publicationDate":"2024-10-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142468346","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
This study investigated the changes in sea ice temperature, microalgae species distribution, shape changes, and photosynthetic activity observed in the first-year ice that forms in winter in Saroma-ko Lagoon, Hokkaido, Japan. Temperatures at the bottom of the ice remained constant at −1.7°C, near the freezing point, while they varied between −6 and −1°C with diel fluctuations at the surface layer. Carefully collected algal samples showed high photosynthetic quantum yield and acclimation to the light intensities of individual ice layers; this indicates that the algal photosynthetic activity responds to dynamic changes in the ice environment, such as variations in temperature, salinity, and brine space. The algal communities consisted of more than 95% diatoms. Smaller algal cells were distributed in the upper layer of the sea ice compared to the lower layers. Chaetoceros sp., the dominant small-cell species, was evenly distributed throughout the layers. In contrast, Detonula confervacea, the dominant large-cell species, was unevenly distributed in the lower layer, with smaller colony size and cell volume in the upper layer. The shape differences observed in this species were thought to be a response to the changing environment within the first-year sea ice.
{"title":"Survival strategies of microalgae in response to fluctuating brine environments in Saroma-ko Lagoon sea ice, Hokkaido, Japan","authors":"Kyoko Kawanobe, Sakae Kudoh, Yoshihiro Suzuki","doi":"10.1111/jpy.13505","DOIUrl":"10.1111/jpy.13505","url":null,"abstract":"<p>This study investigated the changes in sea ice temperature, microalgae species distribution, shape changes, and photosynthetic activity observed in the first-year ice that forms in winter in Saroma-ko Lagoon, Hokkaido, Japan. Temperatures at the bottom of the ice remained constant at −1.7°C, near the freezing point, while they varied between −6 and −1°C with diel fluctuations at the surface layer. Carefully collected algal samples showed high photosynthetic quantum yield and acclimation to the light intensities of individual ice layers; this indicates that the algal photosynthetic activity responds to dynamic changes in the ice environment, such as variations in temperature, salinity, and brine space. The algal communities consisted of more than 95% diatoms. Smaller algal cells were distributed in the upper layer of the sea ice compared to the lower layers. <i>Chaetoceros</i> sp., the dominant small-cell species, was evenly distributed throughout the layers. In contrast, <i>Detonula confervacea</i>, the dominant large-cell species, was unevenly distributed in the lower layer, with smaller colony size and cell volume in the upper layer. The shape differences observed in this species were thought to be a response to the changing environment within the first-year sea ice.</p>","PeriodicalId":16831,"journal":{"name":"Journal of Phycology","volume":"60 5","pages":"1305-1318"},"PeriodicalIF":2.8,"publicationDate":"2024-10-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/jpy.13505","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142372110","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
This investigation reports the polyphasic characterization of six cyanobacterial strains that were isolated from Basantgarh village of district Udhampur in the union territory of Jammu and Kashmir, India. Morphological examination of the isolated strains indicated that the strains are members of the genus Nostoc or its morphotypes. Phylogenetic analyses using the 16S rRNA gene showed that five strains clustered in the Nostoc sensu stricto clade, whereas one strain clustered in the Desmonostoc clade. Further, comparative studies with their phylogenetically related taxa, based on morphology, folded secondary structures, phylogeny of the ITS rRNA region, and the percent genetic homology of 16S rRNA gene and ITS rRNA region clearly established the strains as novel taxa belonging to the genera Nostoc and Desmonostoc. Also, two strains 21A-PS and 2JNA-PS emerged as conspecific to each other, representing the same species of Nostoc. Hence, in accordance with the International code of Nomenclature for algae, fungi, and plants, this study describes Nostoc jammuense, Nostoc globosum, Nostoc breve, and Nostoc coriaceum, as novel species of the genus Nostoc, while Desmonostoc raii is described as a novel species of the genus Desmonostoc. This study adds novel species of Nostoc from Indian habitats and reinforces the need to explore the Nostoc sensu stricto clade for more novel taxa.
{"title":"Expanding the cyanobacterial flora of India: Multiple novel species of Nostoc and Desmonostoc from Jammu and Kashmir, India using a polyphasic approach","authors":"Naresh Kumar, Aniket Saraf, Sagarika Pal, Prashant Singh","doi":"10.1111/jpy.13498","DOIUrl":"10.1111/jpy.13498","url":null,"abstract":"<p>This investigation reports the polyphasic characterization of six cyanobacterial strains that were isolated from Basantgarh village of district Udhampur in the union territory of Jammu and Kashmir, India. Morphological examination of the isolated strains indicated that the strains are members of the genus <i>Nostoc</i> or its morphotypes. Phylogenetic analyses using the 16S rRNA gene showed that five strains clustered in the <i>Nostoc</i> sensu stricto clade, whereas one strain clustered in the <i>Desmonostoc</i> clade. Further, comparative studies with their phylogenetically related taxa, based on morphology, folded secondary structures, phylogeny of the ITS rRNA region, and the percent genetic homology of 16S rRNA gene and ITS rRNA region clearly established the strains as novel taxa belonging to the genera <i>Nostoc</i> and <i>Desmonostoc</i>. Also, two strains 21A-PS and 2JNA-PS emerged as conspecific to each other, representing the same species of <i>Nostoc</i>. Hence, in accordance with the International code of Nomenclature for algae, fungi, and plants, this study describes <i>Nostoc jammuense</i>, <i>Nostoc globosum</i>, <i>Nostoc breve</i>, and <i>Nostoc coriaceum</i>, as novel species of the genus <i>Nostoc</i>, while <i>Desmonostoc raii</i> is described as a novel species of the genus <i>Desmonostoc</i>. This study adds novel species of <i>Nostoc</i> from Indian habitats and reinforces the need to explore the <i>Nostoc</i> sensu stricto clade for more novel taxa.</p>","PeriodicalId":16831,"journal":{"name":"Journal of Phycology","volume":"60 5","pages":"1190-1209"},"PeriodicalIF":2.8,"publicationDate":"2024-09-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142348907","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Tomas Lang, Scott F. Cummins, Nicholas A. Paul, Alexandra H. Campbell
Seaweed farming is the single largest aquaculture commodity with >30 million tonnes produced each year. Furthermore, the restoration of lost seaweed forests is gaining significant momentum, particularly for kelps in warming temperate areas. Whether in aquaculture settings, following restoration practices, or in the wild, all seaweeds undergo biotic interactions with a diverse range of co-occurring or cocultured organisms. To date, most research assessing such biotic interactions has focused on the response of the organism interacting with seaweeds, rather than on the seaweeds themselves. However, understanding how seaweeds respond to other organisms, particularly on a molecular scale, is crucial for optimizing outcomes of seaweed farming or restoration efforts and, potentially, also for the conservation of natural populations. In this systematic review, we assessed the molecular processes that seaweeds undergo during biotic interactions and propose priority areas for future research. Despite some insights into the response of seaweeds to biotic interactions, this review specifically highlights a lack of characterization of biomolecules involved in the response to chemical cues derived from interacting organisms (four studies in the last 20 years) and a predominant use of laboratory-based experiments conducted under controlled conditions. Additionally, this review reveals that studies targeting metabolites (70%) are more common than those examining the role of genes (22%) and proteins (8%). To effectively inform seaweed aquaculture efforts, it will be crucial to conduct larger scale experiments simulating natural environments. Also, employing a holistic approach targeting genes and proteins would be beneficial to complement the relatively well-established role of metabolites.
{"title":"Molecular responses of seaweeds to biotic interactions: A systematic review","authors":"Tomas Lang, Scott F. Cummins, Nicholas A. Paul, Alexandra H. Campbell","doi":"10.1111/jpy.13504","DOIUrl":"10.1111/jpy.13504","url":null,"abstract":"<p>Seaweed farming is the single largest aquaculture commodity with >30 million tonnes produced each year. Furthermore, the restoration of lost seaweed forests is gaining significant momentum, particularly for kelps in warming temperate areas. Whether in aquaculture settings, following restoration practices, or in the wild, all seaweeds undergo biotic interactions with a diverse range of co-occurring or cocultured organisms. To date, most research assessing such biotic interactions has focused on the response of the organism interacting with seaweeds, rather than on the seaweeds themselves. However, understanding how seaweeds respond to other organisms, particularly on a molecular scale, is crucial for optimizing outcomes of seaweed farming or restoration efforts and, potentially, also for the conservation of natural populations. In this systematic review, we assessed the molecular processes that seaweeds undergo during biotic interactions and propose priority areas for future research. Despite some insights into the response of seaweeds to biotic interactions, this review specifically highlights a lack of characterization of biomolecules involved in the response to chemical cues derived from interacting organisms (four studies in the last 20 years) and a predominant use of laboratory-based experiments conducted under controlled conditions. Additionally, this review reveals that studies targeting metabolites (70%) are more common than those examining the role of genes (22%) and proteins (8%). To effectively inform seaweed aquaculture efforts, it will be crucial to conduct larger scale experiments simulating natural environments. Also, employing a holistic approach targeting genes and proteins would be beneficial to complement the relatively well-established role of metabolites.</p>","PeriodicalId":16831,"journal":{"name":"Journal of Phycology","volume":"60 5","pages":"1036-1057"},"PeriodicalIF":2.8,"publicationDate":"2024-09-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/jpy.13504","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142289754","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Sarah Garric, Morgane Ratin, Benoit Gallet, Johan Decelle, Ian Probert, Francisco Rodriguez, Christophe Six
Cryptophytes are abundant and ubiquitous microalgae that constitute a major plastid source for kleptoplastidic ciliates and dinoflagellates. Despite their ecological significance, the understanding of their light preferences and photophysiology remains limited. Here, we provide a comprehensive study of the response of the haploid strain Teleaulax amphioxeia (Cr10EHU) to varying light irradiance. This strain is capable of growing under a wide range of irradiance levels, notably by finely tuning the different pigments bound to the membrane light-harvesting proteins. Analysis of the luminal phycoerythrin content revealed remarkable flexibility, with phycoerythrin emerging as a pivotal protein facilitating acclimation to varying light levels. Detailed ultrastructure examinations unveiled that this adaptability was supported by the synthesis of large thylakoidal vesicles, likely enhancing the capture of green photons efficiently under low light, a phenomenon previously undocumented. Teleaulax amphioxeia Cr10EHU effectively regulated light utilization by using a cryptophyte state transition-like process, with a larger amplitude observed under high growth irradiance. Furthermore, our results revealed the establishment of growth irradiance-dependent non-photochemical quenching of fluorescence, likely inducing the dissipation of excess light. This study underscores the particularities and the significant photoadaptability of the plastid of the haploid form of T. amphioxeia. It constitutes a comprehensive photophysiological characterization of the Cr10EHU strain that paves the way for future studies of the kleptoplastidy process.
{"title":"Photophysiology of the haploid form of the cryptophyte Teleaulax amphioxeia","authors":"Sarah Garric, Morgane Ratin, Benoit Gallet, Johan Decelle, Ian Probert, Francisco Rodriguez, Christophe Six","doi":"10.1111/jpy.13495","DOIUrl":"10.1111/jpy.13495","url":null,"abstract":"<p>Cryptophytes are abundant and ubiquitous microalgae that constitute a major plastid source for kleptoplastidic ciliates and dinoflagellates. Despite their ecological significance, the understanding of their light preferences and photophysiology remains limited. Here, we provide a comprehensive study of the response of the haploid strain <i>Teleaulax amphioxeia</i> (Cr10EHU) to varying light irradiance. This strain is capable of growing under a wide range of irradiance levels, notably by finely tuning the different pigments bound to the membrane light-harvesting proteins. Analysis of the luminal phycoerythrin content revealed remarkable flexibility, with phycoerythrin emerging as a pivotal protein facilitating acclimation to varying light levels. Detailed ultrastructure examinations unveiled that this adaptability was supported by the synthesis of large thylakoidal vesicles, likely enhancing the capture of green photons efficiently under low light, a phenomenon previously undocumented. <i>Teleaulax amphioxeia</i> Cr10EHU effectively regulated light utilization by using a cryptophyte state transition-like process, with a larger amplitude observed under high growth irradiance. Furthermore, our results revealed the establishment of growth irradiance-dependent non-photochemical quenching of fluorescence, likely inducing the dissipation of excess light. This study underscores the particularities and the significant photoadaptability of the plastid of the haploid form of <i>T. amphioxeia</i>. It constitutes a comprehensive photophysiological characterization of the Cr10EHU strain that paves the way for future studies of the kleptoplastidy process.</p>","PeriodicalId":16831,"journal":{"name":"Journal of Phycology","volume":"60 5","pages":"1220-1236"},"PeriodicalIF":2.8,"publicationDate":"2024-09-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142252454","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}