Lam Nguyen-Ngoc, Jacob Larsen, Hai Doan-Nhu, Kenneth Neil Mertens, Nina Lundholm, Vy Xuan Nguyen, Bernd Krock, Hung Manh Pham, Mitsunori Iwataki, Sascha Plewe, Gwenael Bilien, Ha Viet Dao, Duyen Ngoc Huynh-Thi, Van Le Tran-Thi, Ian Probert
Ceratocorys armata, C. gourretii, and C. horrida have historically been treated as distinct species based on morphology. Both field samples and cultured strains, however, exhibit continuous morphological variation and intergradations between these taxa. Here, strains from Viet Nam, Japan (Pacific Ocean), and France (Mediterranean Sea, Atlantic Ocean) were analyzed using integrated morphomolecular approaches. Cultured strains revealed morphological intergradations from C. horrida to C. armata and from C. armata to C. gourretii. Phylogenetic analysis based on the ITS1-5.8S-ITS2 rDNA region sequences and the SSU (18S) and LSU (28S) nuclear rDNA gene sequences confirmed the genetic identity of these three taxa for these markers. The ITS2 secondary structure comparisons—including C. malayensis from Viet Nam and Malaysia—further supported their conspecificity, while validating C. malayensis as a distinct species. Based on these data, we have proposed to treat them as formae: C. horrida f. horrida, C. horrida f. armata, and C. horrida f. gourretii. Furthermore, our results indicated that C. malayensis strains from Viet Nam are non-toxic. We have also provided morphological descriptions and illustrations of C. bipes and C. magna, two species rarely reported in the Asia-Pacific region, enhancing the taxonomic clarity of the genus.
{"title":"Morphomolecular studies of Ceratocorys species (Dinophyceae, Gonyaulacales, Protoceratiaceae) reveal that Ceratocorys armata, C. gourretii, and C. horrida are conspecific and should be considered formae of C. horrida","authors":"Lam Nguyen-Ngoc, Jacob Larsen, Hai Doan-Nhu, Kenneth Neil Mertens, Nina Lundholm, Vy Xuan Nguyen, Bernd Krock, Hung Manh Pham, Mitsunori Iwataki, Sascha Plewe, Gwenael Bilien, Ha Viet Dao, Duyen Ngoc Huynh-Thi, Van Le Tran-Thi, Ian Probert","doi":"10.1111/jpy.70108","DOIUrl":"10.1111/jpy.70108","url":null,"abstract":"<p><i>Ceratocorys armata</i>, <i>C. gourretii</i>, and <i>C. horrida</i> have historically been treated as distinct species based on morphology. Both field samples and cultured strains, however, exhibit continuous morphological variation and intergradations between these taxa. Here, strains from Viet Nam, Japan (Pacific Ocean), and France (Mediterranean Sea, Atlantic Ocean) were analyzed using integrated morphomolecular approaches. Cultured strains revealed morphological intergradations from <i>C. horrida</i> to <i>C. armata</i> and from <i>C. armata</i> to <i>C. gourretii</i>. Phylogenetic analysis based on the ITS1-5.8S-ITS2 rDNA region sequences and the SSU (18S) and LSU (28S) nuclear rDNA gene sequences confirmed the genetic identity of these three taxa for these markers. The ITS2 secondary structure comparisons—including <i>C. malayensis</i> from Viet Nam and Malaysia—further supported their conspecificity, while validating <i>C. malayensis</i> as a distinct species. Based on these data, we have proposed to treat them as formae: <i>C. horrida</i> f. <i>horrida</i>, <i>C. horrida</i> f. <i>armata</i>, and <i>C. horrida</i> f. <i>gourretii</i>. Furthermore, our results indicated that <i>C. malayensis</i> strains from Viet Nam are non-toxic. We have also provided morphological descriptions and illustrations of <i>C. bipes</i> and <i>C. magna</i>, two species rarely reported in the Asia-Pacific region, enhancing the taxonomic clarity of the genus.</p>","PeriodicalId":16831,"journal":{"name":"Journal of Phycology","volume":"61 6","pages":"1827-1850"},"PeriodicalIF":3.4,"publicationDate":"2025-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145678048","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Wilhelm Boland, Ingo Maier, Akira F. Peters, Hiroshi Kawai, Renato Westermeier, J. Mark Cock, Susana M. Coelho, Claire M. M. Gachon
<p>Dieter G. Müller died on 7 August 2025, at the age of 90, in Konstanz, Germany, where he had lived and worked for 52 years.</p><p>Dieter's work advanced our knowledge of algal reproduction, host-virus interactions, and pathogen biology. His contributions have profoundly influenced phycology, providing foundational insights into algal developmental biology and facilitating ongoing research in algal genetics and ecology. Born in Stuttgart on 24 January 1935, Dieter studied biology at the University of Tübingen. For his PhD (1959–1961) under Erwin Bünning, he investigated lunar rhythms in the marine brown alga <i>Dictyota dichotoma</i>, laying the groundwork for modern research on algal lunar cycles. After a postdoctoral position in Pennsylvania, he joined the Max Planck Institute for Plant Breeding Research in Cologne, focusing on the complex life cycle of <i>Ectocarpus</i> (Müller, <span>1964</span>, <span>1966</span>, <span>1967</span>). By inventing methods to raise sporophytes from individual zygotes, he laid the foundation for genetic research in this species. Some of this work demonstrated clear bipolar sex determination in <i>Ectocarpus</i> (Müller, <span>1976</span>).</p><p>Dieter also discovered that settled female gametes attract males with the volatile pheromone ectocarpene. Cooperation with Lothar Jaenicke's group led to the structural identification of the pheromone (Müller et al., <span>1971</span>), and collaborative work identified pheromones in several other brown algae, showing that in kelps they could trigger both sperm release and attraction (Maier & Müller, <span>1986</span>; Müller et al., <span>1979</span>).</p><p>In 1973, Dieter moved to the University of Konstanz as professor of plant developmental biology. His 1971 pheromone discovery had featured on the cover of <i>Science</i>, and his lab, far from the sea, became globally renowned in phycology. Students nicknamed him “Sex-Müller” for his lectures on reproduction. He supervised students with enthusiasm, encouraging novel discoveries. Many visiting students and researchers regarded their time in Konstanz as the most formative of their careers. At this time, Eric Henry introduced him to algal viruses. Dieter's own collections in New Zealand led to the discovery of <i>EsV-1</i>, the first virus identified in brown algae (Müller et al., <span>1990</span>). Sequencing of its genome (Delaroque et al., <span>2001</span>), in collaboration with Rolf Knippers and Wilhelm Boland, revealed a new viral family, the Phycodnaviridae. Dieter showed that <i>EsV-1</i> integrates into the algal genome, is vertically transmitted, and becomes active only during reproduction (Müller, <span>1991</span>).</p><p>Dieter was a hands-on scientist, working daily at the bench and maintaining an extensive culture collection (now housed in the KU-MACC and CCAP culture collections). He relied on his dexterity, that is, using pipettes and steel needles to manipulate the algae rather than micromani
迪特尔·g·米勒于2025年8月7日在德国康斯坦茨去世,享年90岁,他在那里生活和工作了52年。迪特尔的工作提高了我们对藻类繁殖、宿主-病毒相互作用和病原体生物学的认识。他的贡献对生理学产生了深远的影响,为藻类发育生物学提供了基础见解,并促进了藻类遗传学和生态学的持续研究。迪特尔于1935年1月24日出生于斯图加特,在宾根大学学习生物学。在攻读博士学位期间(1959-1961),他在欧文·宁(Erwin bnning)的指导下研究了海洋褐藻Dictyota dichotoma的月相节律,为藻类月相周期的现代研究奠定了基础。在宾夕法尼亚完成博士后工作后,他加入了位于科隆的马克斯·普朗克植物育种研究所,主要研究Ectocarpus复杂的生命周期(m ller, 1964,1966,1967)。通过发明从单个受精卵培养孢子体的方法,他为该物种的遗传研究奠定了基础。这方面的一些工作证明了外腕足动物明确的双极性性别决定(m勒,1976)。迪特尔还发现,定居下来的雌性配子会用易挥发的信息素外皮吸引雄性。与Lothar Jaenicke小组的合作鉴定了信息素的结构(m ller et al., 1971),并在其他几种褐藻中鉴定了信息素,表明在海带中它们可以触发精子释放和吸引(Maier & m ller, 1986; m ller et al., 1979)。1973年,迪特尔来到康斯坦茨大学,担任植物发育生物学教授。他在1971年发现的信息素登上了《科学》杂志的封面,他的远离海洋的实验室在心理学上享誉全球。学生们因为他关于生殖的讲座给他起了个绰号叫“性小姐”。他热情地指导学生,鼓励他们有新的发现。许多访问学生和研究人员认为,在康斯坦茨的这段时间对他们的职业生涯影响最大。这时,埃里克·亨利向他介绍了藻类病毒。Dieter自己在新西兰的收集导致了EsV-1的发现,这是在褐藻中发现的第一种病毒(m勒等人,1990年)。与Rolf Knippers和Wilhelm Boland合作,对其基因组进行了测序(Delaroque等人,2001年),揭示了一个新的病毒家族,即藻纳病毒科。Dieter表明,EsV-1整合到藻类基因组中,垂直传播,并且仅在繁殖期间才变得活跃(m ller, 1991)。迪特尔是一位亲历亲为的科学家,每天都在实验台上工作,并维护着大量的文化收藏(现在收藏在KU-MACC和CCAP的文化收藏中)。他依靠自己的灵巧,即使用移液管和钢针来操纵藻类,而不是微型操纵器。他的专长扩展到真核藻类病原体。通过掌握它们的隔离和维护,他为同事们提供了宝贵的文化资料。2000年退休后,迪特在家里开了一个私人实验室。他一直保存着自己的藏品,直到有部分藏品在其他地方找到。他还和妻子海尔加(Helga)一起参加她的科学会议。海尔加是一名原生生物学家,于2011年去世。他晚年的主要关注点是在智利的海带驯化(Westermeier et al., 2010)。2001年,他被智利南方大学授予荣誉博士学位。迪特尔继续研究藻类病原体,训练学生学习他的技术,并研究影响褐藻、红藻和绿藻以及硅藻和鞭毛藻的各种卵菌寄生虫。由于视力下降,他的工作直到2019年才停止,但即使在生命的最后几年,随着藻类基因组学和发育生物学的进步,迪特尔的思维仍然很敏锐。在他的养老院,他继续激励年轻的科学家,经常主持他们的讨论。Dieter发表了220多篇论文,描述了一个新的褐藻属和种,成为了星形藻目的类型(m ller等人,1998),以及一种新的疟原虫寄生虫(Maier等人,2000),他还以自己的名义命名了一些物种,包括智利的Desmarestia (Ramírez & Peters, 1992; Yang等人,2014)和一种红藻的Olpidiopsis病原体(Badis等人,2019)。他的遗产深深植根于生理学:藻类的生命周期、发育、信息素生物学和宿主-病毒相互作用等领域都受到他的发现的强烈影响。非常感谢,迪特。
{"title":"Professor Dieter G. Müller's legacy in algal developmental biology and phycology (1935–2025)","authors":"Wilhelm Boland, Ingo Maier, Akira F. Peters, Hiroshi Kawai, Renato Westermeier, J. Mark Cock, Susana M. Coelho, Claire M. M. Gachon","doi":"10.1111/jpy.70106","DOIUrl":"https://doi.org/10.1111/jpy.70106","url":null,"abstract":"<p>Dieter G. Müller died on 7 August 2025, at the age of 90, in Konstanz, Germany, where he had lived and worked for 52 years.</p><p>Dieter's work advanced our knowledge of algal reproduction, host-virus interactions, and pathogen biology. His contributions have profoundly influenced phycology, providing foundational insights into algal developmental biology and facilitating ongoing research in algal genetics and ecology. Born in Stuttgart on 24 January 1935, Dieter studied biology at the University of Tübingen. For his PhD (1959–1961) under Erwin Bünning, he investigated lunar rhythms in the marine brown alga <i>Dictyota dichotoma</i>, laying the groundwork for modern research on algal lunar cycles. After a postdoctoral position in Pennsylvania, he joined the Max Planck Institute for Plant Breeding Research in Cologne, focusing on the complex life cycle of <i>Ectocarpus</i> (Müller, <span>1964</span>, <span>1966</span>, <span>1967</span>). By inventing methods to raise sporophytes from individual zygotes, he laid the foundation for genetic research in this species. Some of this work demonstrated clear bipolar sex determination in <i>Ectocarpus</i> (Müller, <span>1976</span>).</p><p>Dieter also discovered that settled female gametes attract males with the volatile pheromone ectocarpene. Cooperation with Lothar Jaenicke's group led to the structural identification of the pheromone (Müller et al., <span>1971</span>), and collaborative work identified pheromones in several other brown algae, showing that in kelps they could trigger both sperm release and attraction (Maier & Müller, <span>1986</span>; Müller et al., <span>1979</span>).</p><p>In 1973, Dieter moved to the University of Konstanz as professor of plant developmental biology. His 1971 pheromone discovery had featured on the cover of <i>Science</i>, and his lab, far from the sea, became globally renowned in phycology. Students nicknamed him “Sex-Müller” for his lectures on reproduction. He supervised students with enthusiasm, encouraging novel discoveries. Many visiting students and researchers regarded their time in Konstanz as the most formative of their careers. At this time, Eric Henry introduced him to algal viruses. Dieter's own collections in New Zealand led to the discovery of <i>EsV-1</i>, the first virus identified in brown algae (Müller et al., <span>1990</span>). Sequencing of its genome (Delaroque et al., <span>2001</span>), in collaboration with Rolf Knippers and Wilhelm Boland, revealed a new viral family, the Phycodnaviridae. Dieter showed that <i>EsV-1</i> integrates into the algal genome, is vertically transmitted, and becomes active only during reproduction (Müller, <span>1991</span>).</p><p>Dieter was a hands-on scientist, working daily at the bench and maintaining an extensive culture collection (now housed in the KU-MACC and CCAP culture collections). He relied on his dexterity, that is, using pipettes and steel needles to manipulate the algae rather than micromani","PeriodicalId":16831,"journal":{"name":"Journal of Phycology","volume":"61 6","pages":"1534-1535"},"PeriodicalIF":3.4,"publicationDate":"2025-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/jpy.70106","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145848180","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Linsen Bai, Yunfei Wang, Xingfang Zhou, Qian Liu, Lankun Dong, Zhen Che, Zhongyuan Zhou, You Wang
Exogenous application of methyl jasmonate (MeJA), a plant stress-responsive hormone, has been suggested to improve plant resistance, but its protective role in marine microalgae under pollutant exposure remains poorly understood. This study investigated the cytoprotective effects of MeJA on the marine green microalga Chlorella sp. exposed to 2,2′,4,4′-tetrabromodiphenyl ether (BDE-47), a highly biotoxic dibrominated diphenyl ether. Exposure to BDE-47 (0.075 mg · L−1) significantly impaired cellular structure, inhibited growth, and induced oxidative stress, as evidenced by reactive oxygen species (ROS) overproduction, membrane lipid peroxidation, G2/M phase arrest, and DNA damage. Cotreatment with 0.1 μM MeJA was associated with a significant reduction in adverse effects (p < 0.05), with observed lower ROS levels and elevated activities of key antioxidant enzymes superoxide dismutase (SOD) and catalase (CAT). Additionally, MeJA-treated cells exhibited increased endogenous jasmonic acid (JA) content and upregulated lipoxygenase (LOX) activity and allene oxide synthase (AOS) content, both enzymes involved in JA biosynthesis. Partial least squares structural equation modeling suggested a potential link between MeJA-activated JA biosynthesis and antioxidant enzyme induction, indicating a self-amplifying ROS scavenging mechanism that may counteract BDE-47 toxicity. The findings have provided insights into the use of plant hormones to enhance microalgae tolerance to environmental pollutants, with potential applications in microalgae cultivation and biotechnology.
{"title":"Exogenous methyl jasmonate activates the jasmonic acid signaling pathway in Chlorella sp. to alleviate 2,2′,4,4′-tetrabromodiphenyl ether stress","authors":"Linsen Bai, Yunfei Wang, Xingfang Zhou, Qian Liu, Lankun Dong, Zhen Che, Zhongyuan Zhou, You Wang","doi":"10.1111/jpy.70112","DOIUrl":"10.1111/jpy.70112","url":null,"abstract":"<p>Exogenous application of methyl jasmonate (MeJA), a plant stress-responsive hormone, has been suggested to improve plant resistance, but its protective role in marine microalgae under pollutant exposure remains poorly understood. This study investigated the cytoprotective effects of MeJA on the marine green microalga <i>Chlorella</i> sp. exposed to 2,2′,4,4′-tetrabromodiphenyl ether (BDE-47), a highly biotoxic dibrominated diphenyl ether. Exposure to BDE-47 (0.075 mg · L<sup>−1</sup>) significantly impaired cellular structure, inhibited growth, and induced oxidative stress, as evidenced by reactive oxygen species (ROS) overproduction, membrane lipid peroxidation, G2/M phase arrest, and DNA damage. Cotreatment with 0.1 μM MeJA was associated with a significant reduction in adverse effects (<i>p</i> < 0.05), with observed lower ROS levels and elevated activities of key antioxidant enzymes superoxide dismutase (SOD) and catalase (CAT). Additionally, MeJA-treated cells exhibited increased endogenous jasmonic acid (JA) content and upregulated lipoxygenase (LOX) activity and allene oxide synthase (AOS) content, both enzymes involved in JA biosynthesis. Partial least squares structural equation modeling suggested a potential link between MeJA-activated JA biosynthesis and antioxidant enzyme induction, indicating a self-amplifying ROS scavenging mechanism that may counteract BDE-47 toxicity. The findings have provided insights into the use of plant hormones to enhance microalgae tolerance to environmental pollutants, with potential applications in microalgae cultivation and biotechnology.</p>","PeriodicalId":16831,"journal":{"name":"Journal of Phycology","volume":"61 6","pages":"1753-1766"},"PeriodicalIF":3.4,"publicationDate":"2025-12-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145668585","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Julien Böhm, Irmgard Blindow, Niclas Gyllenstrand, Wolfgang Diewald, Hendrik Schubert
Sphaerochara canadensis, an aquatic macrophyte belonging to the Characeae, is described as a species with a circumpolar distribution and occurs in the polar (to boreal) zonobiomes, suggesting that it is cold-stenothermic. A recent report of an occurrence in Lake Wolfgangsee, Austria, contradicted this assumption, prompting this study to investigate the species' physiological adaptation capabilities and, consequently, ability to survive in non-polar environments. Field measurements at Lake Torneträsk, Sweden, indicated that S. canadensis is more adapted to low light compared to the co-occurring charophytes, with water temperatures in the lake ranging from 10 to 12°C during the experiment. Cultivation experiments also revealed clear temperature effects on growth, photosynthetic performance, and pigment composition at 5, 10, 15, and 20°C, with higher temperatures having a positive impact. Furthermore, it was shown that the species can adapt to different light intensities. A published occurrence of the species in Austria is probably erroneous. The photographic material of the original report was misidentified, and eDNA analyses of water samples taken from Lake Wolfgangsee and surrounding water bodies failed to confirm the presence of the species. Consequently, a factor other than temperature limits its distribution. Identifying the factor is crucial for conservation under climate change.
{"title":"Sphaerochara canadensis (Charophyceae): A circumpolar species with a high temperature optimum","authors":"Julien Böhm, Irmgard Blindow, Niclas Gyllenstrand, Wolfgang Diewald, Hendrik Schubert","doi":"10.1111/jpy.70111","DOIUrl":"10.1111/jpy.70111","url":null,"abstract":"<p><i>Sphaerochara canadensis</i>, an aquatic macrophyte belonging to the Characeae, is described as a species with a circumpolar distribution and occurs in the polar (to boreal) zonobiomes, suggesting that it is cold-stenothermic. A recent report of an occurrence in Lake Wolfgangsee, Austria, contradicted this assumption, prompting this study to investigate the species' physiological adaptation capabilities and, consequently, ability to survive in non-polar environments. Field measurements at Lake Torneträsk, Sweden, indicated that <i>S. canadensis</i> is more adapted to low light compared to the co-occurring charophytes, with water temperatures in the lake ranging from 10 to 12°C during the experiment. Cultivation experiments also revealed clear temperature effects on growth, photosynthetic performance, and pigment composition at 5, 10, 15, and 20°C, with higher temperatures having a positive impact. Furthermore, it was shown that the species can adapt to different light intensities. A published occurrence of the species in Austria is probably erroneous. The photographic material of the original report was misidentified, and eDNA analyses of water samples taken from Lake Wolfgangsee and surrounding water bodies failed to confirm the presence of the species. Consequently, a factor other than temperature limits its distribution. Identifying the factor is crucial for conservation under climate change.</p>","PeriodicalId":16831,"journal":{"name":"Journal of Phycology","volume":"61 6","pages":"1863-1873"},"PeriodicalIF":3.4,"publicationDate":"2025-12-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12718439/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145668502","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Raphidiopsis raciborskii is a diazotrophic cyanobacterium, globally distributed in aquatic environments and known for forming toxic blooms, thereby affecting ecosystem services. South American strains are producers of saxitoxins, potent neurotoxins harmful to humans and animals. This study examined the effect of nutrient availability on saxitoxin production in two toxic R. raciborskii strains. Reverse transcription–quantitative polymerase chain reaction (RT-qPCR) was used to investigate the transcriptional response of the saxitoxin sxtA4 gene under nitrogen and phosphorus gradients and the intracellular toxin concentration was measured by high performance liquid chromatography (HPLC). Results showed that the sxtA4 gene expression was generally upregulated at lower nutrient conditions. Positive correlations were observed among transcripts of sxtA4 and genes related to metabolic processes (ntcA, nifH, and pstS), an indication that nutrient stress may affect sxt gene regulation. Intracellular saxitoxin concentration increased slightly under moderate nitrogen reduction (10%), although not always significantly. Under phosphorus reduction, despite the observed upregulated transcription of sxtA4, total saxitoxin concentration significantly decreased, a possible consequence of hindered metabolic fitness. Interestingly, nutrient availability also affected the profiles of toxin analogs produced by R. raciborskii. Because different analogs exhibit variable toxicity, the presence of certain variants may enhance the toxic potential of an entire population under shifting environmental stressors. The responses observed in this study indicate the need for further investigations to identify the mechanisms controlling toxicity. This is particularly relevant as nutrient reduction may control cyanobacterial growth but not necessarily their toxin production.
{"title":"Nutrient-driven regulation of saxitoxin gene expression and toxin production in Raphidiopsis raciborskii (Cyanobacteria)","authors":"Mehrzad Zare, Bruna Barçante, Juliana da Silva Martins Pimentel, Alessandra Giani","doi":"10.1111/jpy.70115","DOIUrl":"10.1111/jpy.70115","url":null,"abstract":"<p><i>Raphidiopsis raciborskii</i> is a diazotrophic cyanobacterium, globally distributed in aquatic environments and known for forming toxic blooms, thereby affecting ecosystem services. South American strains are producers of saxitoxins, potent neurotoxins harmful to humans and animals. This study examined the effect of nutrient availability on saxitoxin production in two toxic <i>R. raciborskii</i> strains. Reverse transcription–quantitative polymerase chain reaction (RT-qPCR) was used to investigate the transcriptional response of the saxitoxin <i>sxt</i>A4 gene under nitrogen and phosphorus gradients and the intracellular toxin concentration was measured by high performance liquid chromatography (HPLC). Results showed that the <i>sxt</i>A4 gene expression was generally upregulated at lower nutrient conditions. Positive correlations were observed among transcripts of <i>sxt</i>A4 and genes related to metabolic processes (<i>ntc</i>A, <i>nif</i>H, and <i>pst</i>S), an indication that nutrient stress may affect <i>sxt</i> gene regulation. Intracellular saxitoxin concentration increased slightly under moderate nitrogen reduction (10%), although not always significantly. Under phosphorus reduction, despite the observed upregulated transcription of <i>sxt</i>A4, total saxitoxin concentration significantly decreased, a possible consequence of hindered metabolic fitness. Interestingly, nutrient availability also affected the profiles of toxin analogs produced by <i>R</i>. <i>raciborskii</i>. Because different analogs exhibit variable toxicity, the presence of certain variants may enhance the toxic potential of an entire population under shifting environmental stressors. The responses observed in this study indicate the need for further investigations to identify the mechanisms controlling toxicity. This is particularly relevant as nutrient reduction may control cyanobacterial growth but not necessarily their toxin production.</p>","PeriodicalId":16831,"journal":{"name":"Journal of Phycology","volume":"61 6","pages":"1738-1752"},"PeriodicalIF":3.4,"publicationDate":"2025-12-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12718436/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145668588","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Kehui Li, Yun Zhou, Aimee Caye G. Chang, Mailor W. W. Amaral, Kyle G. Keepers, Fangru Nan, Xudong Liu, Jie Wang, Shulian Xie, John P. Kociolek, Qi Liu
Three new species of the freshwater diatom genus Rhopalodia from Yunnan province, China, have been described in this study based on a combination of morphological and molecular data. The diagnostic characteristics of Rhopalodia yunnanensis sp. nov. are the absence of secondary costae, and spines on its outer surface exhibit a flame-like morphology. Rhopalodia inflata sp. nov. is distinguished from other Rhopalodia species by the pronounced dorsal middle inflation, blunt-pointed spines, and areolae occluded by volae that consist of two or three c-shaped openings. The areolae of R. fuxianensis sp. nov. are covered by raised siliceous petal-like occlusions with one to two siliceous processes. Phylogenetic analysis based on the SSU rDNA and rbcL sequence data places the three new species within a distinct clade, clearly separated from other sequenced Rhopalodia species, including the generitype, R. gibba. In addition, the plastid, mitochondrial, and spheroid body genomes of the three novel species are presented and characterized in this paper.
{"title":"Morphology, phylogeny, and organelle genomics of three new Rhopalodia species (Rhopalodiales, Bacillariophyceae)","authors":"Kehui Li, Yun Zhou, Aimee Caye G. Chang, Mailor W. W. Amaral, Kyle G. Keepers, Fangru Nan, Xudong Liu, Jie Wang, Shulian Xie, John P. Kociolek, Qi Liu","doi":"10.1111/jpy.70114","DOIUrl":"10.1111/jpy.70114","url":null,"abstract":"<p>Three new species of the freshwater diatom genus <i>Rhopalodia</i> from Yunnan province, China, have been described in this study based on a combination of morphological and molecular data. The diagnostic characteristics of <i>Rhopalodia yunnanensis</i> sp. nov. are the absence of secondary costae, and spines on its outer surface exhibit a flame-like morphology. <i>Rhopalodia inflata</i> sp. nov. is distinguished from other <i>Rhopalodia</i> species by the pronounced dorsal middle inflation, blunt-pointed spines, and areolae occluded by volae that consist of two or three c-shaped openings. The areolae of <i>R. fuxianensis</i> sp. nov. are covered by raised siliceous petal-like occlusions with one to two siliceous processes. Phylogenetic analysis based on the SSU rDNA and <i>rbc</i>L sequence data places the three new species within a distinct clade, clearly separated from other sequenced <i>Rhopalodia</i> species, including the generitype, <i>R. gibba</i>. In addition, the plastid, mitochondrial, and spheroid body genomes of the three novel species are presented and characterized in this paper.</p>","PeriodicalId":16831,"journal":{"name":"Journal of Phycology","volume":"61 6","pages":"1767-1784"},"PeriodicalIF":3.4,"publicationDate":"2025-12-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145654505","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Ivan M. Carneiro, Ana Paula A. Veloso, Fábio N. Demarqui, Maria Teresa M. Széchy
It has been well established that warming beyond certain thresholds can negatively affect the growth of canopy-forming macroalgae. However, most studies evaluating these effects have been conducted under controlled laboratory conditions. Observational studies investigating the impact of extreme temperatures on growth rates have been rare and typically limited to events such as marine heatwaves or areas affected by thermal pollution. The decline in vertical growth could be detrimental to the development and recovery of macroalgal canopies, significantly impacting habitat complexity. This study examined spatiotemporal variations in thallus height and vertical growth rates of benthic Sargassum species near the Brazilian Nuclear Power Station (BNPS). Samples were collected from sites exposed and unexposed to the thermal effluent of the BNPS, across different periods. Throughout the sampling periods, sites exposed to the thermal effluent consistently exhibited lower vertical growth rates than unexposed sites. Reduced thallus height was also observed at impacted sites during the first sampling period, whereas in the second period, this stunted canopy was observed only at the site closest to the thermal effluent outfall. This decline in vertical growth could reduce habitat complexity, potentially altering the structure of shallow rocky macroalgal communities. Even acknowledging the limitations in establishing cause–effect relationships in in situ studies, these results can provide important insights into the potential effects of warming on shallow, rocky-bottom communities and may offer valuable guidance for managing and monitoring Sargassum populations in the face of thermal pollution and global climate change.
{"title":"Stunted canopy: Marine forests under the thermal effluent of a nuclear power plant","authors":"Ivan M. Carneiro, Ana Paula A. Veloso, Fábio N. Demarqui, Maria Teresa M. Széchy","doi":"10.1111/jpy.70113","DOIUrl":"10.1111/jpy.70113","url":null,"abstract":"<p>It has been well established that warming beyond certain thresholds can negatively affect the growth of canopy-forming macroalgae. However, most studies evaluating these effects have been conducted under controlled laboratory conditions. Observational studies investigating the impact of extreme temperatures on growth rates have been rare and typically limited to events such as marine heatwaves or areas affected by thermal pollution. The decline in vertical growth could be detrimental to the development and recovery of macroalgal canopies, significantly impacting habitat complexity. This study examined spatiotemporal variations in thallus height and vertical growth rates of benthic <i>Sargassum</i> species near the Brazilian Nuclear Power Station (BNPS). Samples were collected from sites exposed and unexposed to the thermal effluent of the BNPS, across different periods. Throughout the sampling periods, sites exposed to the thermal effluent consistently exhibited lower vertical growth rates than unexposed sites. Reduced thallus height was also observed at impacted sites during the first sampling period, whereas in the second period, this stunted canopy was observed only at the site closest to the thermal effluent outfall. This decline in vertical growth could reduce habitat complexity, potentially altering the structure of shallow rocky macroalgal communities. Even acknowledging the limitations in establishing cause–effect relationships in in situ studies, these results can provide important insights into the potential effects of warming on shallow, rocky-bottom communities and may offer valuable guidance for managing and monitoring <i>Sargassum</i> populations in the face of thermal pollution and global climate change.</p>","PeriodicalId":16831,"journal":{"name":"Journal of Phycology","volume":"61 6","pages":"1884-1894"},"PeriodicalIF":3.4,"publicationDate":"2025-12-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12718433/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145654661","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Prasinophytes are a globally distributed, diverse polyphyletic group of photosynthetic green algae, displaying a combination of presumably ancestral traits for the Chloroplastida. The Nephroselmidophyceae is a prasinophyte clade comprising small biflagellate algae that includes the marine mixoplankton Nephroselmis pyriformis, which was previously shown to feed on bacteria, particularly under low concentrations of dissolved inorganic nutrients. Given its mixotrophic proclivities and phylogenetic position, N. pyriformis has the potential to provide insights into early green algal evolution and ecophysiology. In this study, we have presented a highly contiguous nuclear genome assembly for N. pyriformis. We acquired both Illumina and PacBio long-read data to assemble a 70.8-Mbp nuclear genome annotated with a total of 19,330 protein-coding genes. The genome is inferred to be haploid based on the base frequency distribution at variable sites, together with prior cell biological information from a related species. When compared with four other green algal genomes, N. pyriformis displayed a relatively large proportion of ortholog genes shared with the Chlorophyta. The nuclear genomic data presented here will be valuable for a range of studies, including green algal phylogenomics, genome evolution, and phago-mixotrophy.
{"title":"Nuclear genome assembly and annotation for the phagotrophic green alga Nephroselmis pyriformis","authors":"Sophie Charvet, Eunsoo Kim","doi":"10.1111/jpy.70109","DOIUrl":"10.1111/jpy.70109","url":null,"abstract":"<p>Prasinophytes are a globally distributed, diverse polyphyletic group of photosynthetic green algae, displaying a combination of presumably ancestral traits for the Chloroplastida. The Nephroselmidophyceae is a prasinophyte clade comprising small biflagellate algae that includes the marine mixoplankton <i>Nephroselmis pyriformis</i>, which was previously shown to feed on bacteria, particularly under low concentrations of dissolved inorganic nutrients. Given its mixotrophic proclivities and phylogenetic position, <i>N. pyriformis</i> has the potential to provide insights into early green algal evolution and ecophysiology. In this study, we have presented a highly contiguous nuclear genome assembly for <i>N. pyriformis</i>. We acquired both Illumina and PacBio long-read data to assemble a 70.8-Mbp nuclear genome annotated with a total of 19,330 protein-coding genes. The genome is inferred to be haploid based on the base frequency distribution at variable sites, together with prior cell biological information from a related species. When compared with four other green algal genomes, <i>N. pyriformis</i> displayed a relatively large proportion of ortholog genes shared with the Chlorophyta. The nuclear genomic data presented here will be valuable for a range of studies, including green algal phylogenomics, genome evolution, and phago-mixotrophy.</p>","PeriodicalId":16831,"journal":{"name":"Journal of Phycology","volume":"61 6","pages":"1566-1575"},"PeriodicalIF":3.4,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12718437/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145654606","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Stefania Bianco, Manuela Bordiga, Gerald Langer, Patrizia Ziveri, Federica Cerino, Federica Relitti, Vincenzo Alessandro Laudicella, Andrea Di Giulio, Claudia Lupi
The coccolithophore Helicosphaera carteri is an understudied, yet ecologically and biogeochemically important, marine calcifier. Hence, its response to ocean acidification has implications for ecosystem function and the marine carbon cycle. Here we employed dilute batch cultures featuring a coupled C-system manipulation (295, 444, and 600 μatm CO2) to analyze the response of H. carteri in terms of growth rate and particulate carbon production, two key eco-physiological and biogeochemical parameters. We highlight that both growth rate and organic carbon production are CO2 limited at 295 µatm but are not proton inhibited at 600 µatm of CO2. This finding, combined with the maintenance of a stable inorganic production rate, places H. carteri among the coccolithophores less sensitive to seawater acidification. In addition, we tested a widely applied assumption underpinning the determination of carbon production, namely the constancy of particulate carbon quotas over the course of a dilute batch culture. We determined that the assumption holds true, an important validation of a method used in many publications.
{"title":"Helicosphaera carteri (Prymnesiophyceae) under high carbon dioxide: An experimental study","authors":"Stefania Bianco, Manuela Bordiga, Gerald Langer, Patrizia Ziveri, Federica Cerino, Federica Relitti, Vincenzo Alessandro Laudicella, Andrea Di Giulio, Claudia Lupi","doi":"10.1111/jpy.70103","DOIUrl":"10.1111/jpy.70103","url":null,"abstract":"<p>The coccolithophore <i>Helicosphaera carteri</i> is an understudied, yet ecologically and biogeochemically important, marine calcifier. Hence, its response to ocean acidification has implications for ecosystem function and the marine carbon cycle. Here we employed dilute batch cultures featuring a coupled C-system manipulation (295, 444, and 600 μatm CO<sub>2</sub>) to analyze the response of <i>H. carteri</i> in terms of growth rate and particulate carbon production, two key eco-physiological and biogeochemical parameters. We highlight that both growth rate and organic carbon production are CO<sub>2</sub> limited at 295 µatm but are not proton inhibited at 600 µatm of CO<sub>2</sub>. This finding, combined with the maintenance of a stable inorganic production rate, places <i>H. carteri</i> among the coccolithophores less sensitive to seawater acidification. In addition, we tested a widely applied assumption underpinning the determination of carbon production, namely the constancy of particulate carbon quotas over the course of a dilute batch culture. We determined that the assumption holds true, an important validation of a method used in many publications.</p>","PeriodicalId":16831,"journal":{"name":"Journal of Phycology","volume":"61 6","pages":"1576-1590"},"PeriodicalIF":3.4,"publicationDate":"2025-11-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12718441/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145587803","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Undaria pinnatifida is an economically important kelp that is extensively farmed in East Asia. Increasingly severe ocean warming makes it urgent to breed new cultivars that are resistant to higher temperatures. Breeding of triploid sporophytes is a potential way to achieve this purpose. Diploid gametophytes were previously produced via apospory from heterozygous sporophytes; however, their sex was not pure, making it difficult to conduct a precise cross. In the present study, we addressed this issue by means of obtaining aposporous diploid gametophytes from doubled haploid sporophytes that were produced by self-fertilization of a monoicous gametophyte. The sex of the aposporous diploid gametophytes was determined to be male. We crossed the male diploid gametophytes with three female haploid gametophyte clonal lines and obtained three hybrid sporophyte lines, which were identified to be triploid using flow cytometry analysis. We cultivated the three triploid lines in the open sea and evaluated their economic traits in April. Their total length and blade length were significantly higher than the control cultivar despite their cultivation period being ~2 months shorter than that of the control. Obvious decay was observed in the control, but not in the triploid sporophytes, suggesting that they sustained growth in higher temperatures. The triploid sporophytes formed sporophylls but were not able to release spores in the reproductive season, and thus, they were determined to be sterile. This study provides a novel and precise means for breeding triploid sporophytes in U. pinnatifida, which is expected to be useful for breeding triploid cultivars superior to the current diploid cultivars.
{"title":"Breeding of triploid Undaria pinnatifida through crossing aposporous gametophytes derived from doubled haploid sporophytes with haploid gametophytes","authors":"Tifeng Shan, Yuqian Li","doi":"10.1111/jpy.70107","DOIUrl":"10.1111/jpy.70107","url":null,"abstract":"<p><i>Undaria pinnatifida</i> is an economically important kelp that is extensively farmed in East Asia. Increasingly severe ocean warming makes it urgent to breed new cultivars that are resistant to higher temperatures. Breeding of triploid sporophytes is a potential way to achieve this purpose. Diploid gametophytes were previously produced via apospory from heterozygous sporophytes; however, their sex was not pure, making it difficult to conduct a precise cross. In the present study, we addressed this issue by means of obtaining aposporous diploid gametophytes from doubled haploid sporophytes that were produced by self-fertilization of a monoicous gametophyte. The sex of the aposporous diploid gametophytes was determined to be male. We crossed the male diploid gametophytes with three female haploid gametophyte clonal lines and obtained three hybrid sporophyte lines, which were identified to be triploid using flow cytometry analysis. We cultivated the three triploid lines in the open sea and evaluated their economic traits in April. Their total length and blade length were significantly higher than the control cultivar despite their cultivation period being ~2 months shorter than that of the control. Obvious decay was observed in the control, but not in the triploid sporophytes, suggesting that they sustained growth in higher temperatures. The triploid sporophytes formed sporophylls but were not able to release spores in the reproductive season, and thus, they were determined to be sterile. This study provides a novel and precise means for breeding triploid sporophytes in <i>U. pinnatifida</i>, which is expected to be useful for breeding triploid cultivars superior to the current diploid cultivars.</p>","PeriodicalId":16831,"journal":{"name":"Journal of Phycology","volume":"61 6","pages":"1874-1883"},"PeriodicalIF":3.4,"publicationDate":"2025-11-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145523712","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}