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Morphomolecular studies of Ceratocorys species (Dinophyceae, Gonyaulacales, Protoceratiaceae) reveal that Ceratocorys armata, C. gourretii, and C. horrida are conspecific and should be considered formae of C. horrida 对角蝇属(Dinophyceae, Gonyaulacales, Protoceratiaceae)的形态分子研究表明,armata角蝇、C. gourretii角蝇和C. horda角蝇是同源的,应考虑为C. horda的一种。
IF 3.4 3区 生物学 Q1 MARINE & FRESHWATER BIOLOGY Pub Date : 2025-12-05 DOI: 10.1111/jpy.70108
Lam Nguyen-Ngoc, Jacob Larsen, Hai Doan-Nhu, Kenneth Neil Mertens, Nina Lundholm, Vy Xuan Nguyen, Bernd Krock, Hung Manh Pham, Mitsunori Iwataki, Sascha Plewe, Gwenael Bilien, Ha Viet Dao, Duyen Ngoc Huynh-Thi, Van Le Tran-Thi, Ian Probert

Ceratocorys armata, C. gourretii, and C. horrida have historically been treated as distinct species based on morphology. Both field samples and cultured strains, however, exhibit continuous morphological variation and intergradations between these taxa. Here, strains from Viet Nam, Japan (Pacific Ocean), and France (Mediterranean Sea, Atlantic Ocean) were analyzed using integrated morphomolecular approaches. Cultured strains revealed morphological intergradations from C. horrida to C. armata and from C. armata to C. gourretii. Phylogenetic analysis based on the ITS1-5.8S-ITS2 rDNA region sequences and the SSU (18S) and LSU (28S) nuclear rDNA gene sequences confirmed the genetic identity of these three taxa for these markers. The ITS2 secondary structure comparisons—including C. malayensis from Viet Nam and Malaysia—further supported their conspecificity, while validating C. malayensis as a distinct species. Based on these data, we have proposed to treat them as formae: C. horrida f. horrida, C. horrida f. armata, and C. horrida f. gourretii. Furthermore, our results indicated that C. malayensis strains from Viet Nam are non-toxic. We have also provided morphological descriptions and illustrations of C. bipes and C. magna, two species rarely reported in the Asia-Pacific region, enhancing the taxonomic clarity of the genus.

在历史上,阿玛塔角蠓(Ceratocorys armata)、古蠓(C. gourretii)和恐怖蠓(C. horida)在形态学上被视为不同的物种。然而,无论是野外样品还是培养菌株,在这些分类群之间都表现出连续的形态变异和整合。本文采用综合形态分子方法对来自越南、日本(太平洋)和法国(地中海、大西洋)的菌株进行分析。培养菌株在形态上出现了从C.恐怖菌到C.阿玛塔菌和从C.阿玛塔菌到C.古尔蒂菌的整合。基于ITS1-5.8S-ITS2 rDNA区域序列和SSU (18S)和LSU (28S)核rDNA基因序列的系统发育分析证实了这三个分类群对这些标记的遗传同源性。ITS2二级结构比较(包括来自越南和马来西亚的C. malayensis)进一步支持了它们的同质性,同时验证了C. malayensis是一个独特的物种。根据这些数据,我们建议将它们作为菌种处理:C. horror f.h unda, C. horda f.h armata和C. horror f.r ourtii。此外,我们的研究结果表明,越南的马来梭菌菌株是无毒的。本文还对亚太地区罕见的两种C. bipes和C. magna进行了形态描述和图解,提高了该属的分类清晰度。
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引用次数: 0
Professor Dieter G. Müller's legacy in algal developmental biology and phycology (1935–2025) 迪特尔·g·梅<e:1>勒教授在藻类发育生物学和生理学方面的遗产(1935-2025)
IF 3.4 3区 生物学 Q1 MARINE & FRESHWATER BIOLOGY Pub Date : 2025-12-05 DOI: 10.1111/jpy.70106
Wilhelm Boland, Ingo Maier, Akira F. Peters, Hiroshi Kawai, Renato Westermeier, J. Mark Cock, Susana M. Coelho, Claire M. M. Gachon
<p>Dieter G. Müller died on 7 August 2025, at the age of 90, in Konstanz, Germany, where he had lived and worked for 52 years.</p><p>Dieter's work advanced our knowledge of algal reproduction, host-virus interactions, and pathogen biology. His contributions have profoundly influenced phycology, providing foundational insights into algal developmental biology and facilitating ongoing research in algal genetics and ecology. Born in Stuttgart on 24 January 1935, Dieter studied biology at the University of Tübingen. For his PhD (1959–1961) under Erwin Bünning, he investigated lunar rhythms in the marine brown alga <i>Dictyota dichotoma</i>, laying the groundwork for modern research on algal lunar cycles. After a postdoctoral position in Pennsylvania, he joined the Max Planck Institute for Plant Breeding Research in Cologne, focusing on the complex life cycle of <i>Ectocarpus</i> (Müller, <span>1964</span>, <span>1966</span>, <span>1967</span>). By inventing methods to raise sporophytes from individual zygotes, he laid the foundation for genetic research in this species. Some of this work demonstrated clear bipolar sex determination in <i>Ectocarpus</i> (Müller, <span>1976</span>).</p><p>Dieter also discovered that settled female gametes attract males with the volatile pheromone ectocarpene. Cooperation with Lothar Jaenicke's group led to the structural identification of the pheromone (Müller et al., <span>1971</span>), and collaborative work identified pheromones in several other brown algae, showing that in kelps they could trigger both sperm release and attraction (Maier & Müller, <span>1986</span>; Müller et al., <span>1979</span>).</p><p>In 1973, Dieter moved to the University of Konstanz as professor of plant developmental biology. His 1971 pheromone discovery had featured on the cover of <i>Science</i>, and his lab, far from the sea, became globally renowned in phycology. Students nicknamed him “Sex-Müller” for his lectures on reproduction. He supervised students with enthusiasm, encouraging novel discoveries. Many visiting students and researchers regarded their time in Konstanz as the most formative of their careers. At this time, Eric Henry introduced him to algal viruses. Dieter's own collections in New Zealand led to the discovery of <i>EsV-1</i>, the first virus identified in brown algae (Müller et al., <span>1990</span>). Sequencing of its genome (Delaroque et al., <span>2001</span>), in collaboration with Rolf Knippers and Wilhelm Boland, revealed a new viral family, the Phycodnaviridae. Dieter showed that <i>EsV-1</i> integrates into the algal genome, is vertically transmitted, and becomes active only during reproduction (Müller, <span>1991</span>).</p><p>Dieter was a hands-on scientist, working daily at the bench and maintaining an extensive culture collection (now housed in the KU-MACC and CCAP culture collections). He relied on his dexterity, that is, using pipettes and steel needles to manipulate the algae rather than micromani
迪特尔·g·米勒于2025年8月7日在德国康斯坦茨去世,享年90岁,他在那里生活和工作了52年。迪特尔的工作提高了我们对藻类繁殖、宿主-病毒相互作用和病原体生物学的认识。他的贡献对生理学产生了深远的影响,为藻类发育生物学提供了基础见解,并促进了藻类遗传学和生态学的持续研究。迪特尔于1935年1月24日出生于斯图加特,在宾根大学学习生物学。在攻读博士学位期间(1959-1961),他在欧文·宁(Erwin bnning)的指导下研究了海洋褐藻Dictyota dichotoma的月相节律,为藻类月相周期的现代研究奠定了基础。在宾夕法尼亚完成博士后工作后,他加入了位于科隆的马克斯·普朗克植物育种研究所,主要研究Ectocarpus复杂的生命周期(m ller, 1964,1966,1967)。通过发明从单个受精卵培养孢子体的方法,他为该物种的遗传研究奠定了基础。这方面的一些工作证明了外腕足动物明确的双极性性别决定(m勒,1976)。迪特尔还发现,定居下来的雌性配子会用易挥发的信息素外皮吸引雄性。与Lothar Jaenicke小组的合作鉴定了信息素的结构(m ller et al., 1971),并在其他几种褐藻中鉴定了信息素,表明在海带中它们可以触发精子释放和吸引(Maier & m ller, 1986; m ller et al., 1979)。1973年,迪特尔来到康斯坦茨大学,担任植物发育生物学教授。他在1971年发现的信息素登上了《科学》杂志的封面,他的远离海洋的实验室在心理学上享誉全球。学生们因为他关于生殖的讲座给他起了个绰号叫“性小姐”。他热情地指导学生,鼓励他们有新的发现。许多访问学生和研究人员认为,在康斯坦茨的这段时间对他们的职业生涯影响最大。这时,埃里克·亨利向他介绍了藻类病毒。Dieter自己在新西兰的收集导致了EsV-1的发现,这是在褐藻中发现的第一种病毒(m勒等人,1990年)。与Rolf Knippers和Wilhelm Boland合作,对其基因组进行了测序(Delaroque等人,2001年),揭示了一个新的病毒家族,即藻纳病毒科。Dieter表明,EsV-1整合到藻类基因组中,垂直传播,并且仅在繁殖期间才变得活跃(m ller, 1991)。迪特尔是一位亲历亲为的科学家,每天都在实验台上工作,并维护着大量的文化收藏(现在收藏在KU-MACC和CCAP的文化收藏中)。他依靠自己的灵巧,即使用移液管和钢针来操纵藻类,而不是微型操纵器。他的专长扩展到真核藻类病原体。通过掌握它们的隔离和维护,他为同事们提供了宝贵的文化资料。2000年退休后,迪特在家里开了一个私人实验室。他一直保存着自己的藏品,直到有部分藏品在其他地方找到。他还和妻子海尔加(Helga)一起参加她的科学会议。海尔加是一名原生生物学家,于2011年去世。他晚年的主要关注点是在智利的海带驯化(Westermeier et al., 2010)。2001年,他被智利南方大学授予荣誉博士学位。迪特尔继续研究藻类病原体,训练学生学习他的技术,并研究影响褐藻、红藻和绿藻以及硅藻和鞭毛藻的各种卵菌寄生虫。由于视力下降,他的工作直到2019年才停止,但即使在生命的最后几年,随着藻类基因组学和发育生物学的进步,迪特尔的思维仍然很敏锐。在他的养老院,他继续激励年轻的科学家,经常主持他们的讨论。Dieter发表了220多篇论文,描述了一个新的褐藻属和种,成为了星形藻目的类型(m ller等人,1998),以及一种新的疟原虫寄生虫(Maier等人,2000),他还以自己的名义命名了一些物种,包括智利的Desmarestia (Ramírez & Peters, 1992; Yang等人,2014)和一种红藻的Olpidiopsis病原体(Badis等人,2019)。他的遗产深深植根于生理学:藻类的生命周期、发育、信息素生物学和宿主-病毒相互作用等领域都受到他的发现的强烈影响。非常感谢,迪特。
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引用次数: 0
Exogenous methyl jasmonate activates the jasmonic acid signaling pathway in Chlorella sp. to alleviate 2,2′,4,4′-tetrabromodiphenyl ether stress 外源茉莉酸甲酯激活小球藻茉莉酸信号通路,缓解2,2',4,4'-四溴二苯醚胁迫。
IF 3.4 3区 生物学 Q1 MARINE & FRESHWATER BIOLOGY Pub Date : 2025-12-04 DOI: 10.1111/jpy.70112
Linsen Bai, Yunfei Wang, Xingfang Zhou, Qian Liu, Lankun Dong, Zhen Che, Zhongyuan Zhou, You Wang

Exogenous application of methyl jasmonate (MeJA), a plant stress-responsive hormone, has been suggested to improve plant resistance, but its protective role in marine microalgae under pollutant exposure remains poorly understood. This study investigated the cytoprotective effects of MeJA on the marine green microalga Chlorella sp. exposed to 2,2′,4,4′-tetrabromodiphenyl ether (BDE-47), a highly biotoxic dibrominated diphenyl ether. Exposure to BDE-47 (0.075 mg · L−1) significantly impaired cellular structure, inhibited growth, and induced oxidative stress, as evidenced by reactive oxygen species (ROS) overproduction, membrane lipid peroxidation, G2/M phase arrest, and DNA damage. Cotreatment with 0.1 μM MeJA was associated with a significant reduction in adverse effects (p < 0.05), with observed lower ROS levels and elevated activities of key antioxidant enzymes superoxide dismutase (SOD) and catalase (CAT). Additionally, MeJA-treated cells exhibited increased endogenous jasmonic acid (JA) content and upregulated lipoxygenase (LOX) activity and allene oxide synthase (AOS) content, both enzymes involved in JA biosynthesis. Partial least squares structural equation modeling suggested a potential link between MeJA-activated JA biosynthesis and antioxidant enzyme induction, indicating a self-amplifying ROS scavenging mechanism that may counteract BDE-47 toxicity. The findings have provided insights into the use of plant hormones to enhance microalgae tolerance to environmental pollutants, with potential applications in microalgae cultivation and biotechnology.

外源施用茉莉酸甲酯(MeJA)可以提高植物的抗逆性,但其对海洋微藻在污染物暴露下的保护作用尚不清楚。本研究研究了MeJA对暴露于2,2',4,4'-四溴联苯醚(BDE-47)的海洋绿色微藻小球藻的细胞保护作用。暴露于BDE-47 (0.075 mg·L-1)显著破坏细胞结构,抑制生长,诱导氧化应激,表现为活性氧(ROS)过量产生、膜脂过氧化、G2/M期阻滞和DNA损伤。与0.1 μM MeJA共同治疗与不良反应的显著减少相关(p
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引用次数: 0
Sphaerochara canadensis (Charophyceae): A circumpolar species with a high temperature optimum 加拿大圆藻(圆藻科):一种具有高温适宜性的环极物种。
IF 3.4 3区 生物学 Q1 MARINE & FRESHWATER BIOLOGY Pub Date : 2025-12-03 DOI: 10.1111/jpy.70111
Julien Böhm, Irmgard Blindow, Niclas Gyllenstrand, Wolfgang Diewald, Hendrik Schubert

Sphaerochara canadensis, an aquatic macrophyte belonging to the Characeae, is described as a species with a circumpolar distribution and occurs in the polar (to boreal) zonobiomes, suggesting that it is cold-stenothermic. A recent report of an occurrence in Lake Wolfgangsee, Austria, contradicted this assumption, prompting this study to investigate the species' physiological adaptation capabilities and, consequently, ability to survive in non-polar environments. Field measurements at Lake Torneträsk, Sweden, indicated that S. canadensis is more adapted to low light compared to the co-occurring charophytes, with water temperatures in the lake ranging from 10 to 12°C during the experiment. Cultivation experiments also revealed clear temperature effects on growth, photosynthetic performance, and pigment composition at 5, 10, 15, and 20°C, with higher temperatures having a positive impact. Furthermore, it was shown that the species can adapt to different light intensities. A published occurrence of the species in Austria is probably erroneous. The photographic material of the original report was misidentified, and eDNA analyses of water samples taken from Lake Wolfgangsee and surrounding water bodies failed to confirm the presence of the species. Consequently, a factor other than temperature limits its distribution. Identifying the factor is crucial for conservation under climate change.

加拿大Sphaerochara canadensis属水生大型植物,属环极分布,分布于极地(至北方)带生物群系,为冷热性植物。最近在奥地利沃尔夫冈湖发生的一份报告反驳了这一假设,促使这项研究调查物种的生理适应能力,从而研究在非极地环境中生存的能力。在瑞典Torneträsk湖的野外测量表明,与共生的绿藻相比,S. canadensis更适应弱光,实验期间湖水温度在10 - 12°C之间。在5、10、15和20℃的培养实验中,温度对生长、光合性能和色素组成有明显的影响,较高的温度有积极的影响。此外,该物种还能适应不同的光强。关于该物种在奥地利出现的报道可能是错误的。原始报告中的照片材料被错误识别,对沃尔夫冈湖和周围水体的水样进行的eDNA分析也未能证实该物种的存在。因此,温度以外的一个因素限制了它的分布。确定这一因素对于气候变化下的保护至关重要。
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引用次数: 0
Nutrient-driven regulation of saxitoxin gene expression and toxin production in Raphidiopsis raciborskii (Cyanobacteria) 蓝藻Raphidiopsis raciborskii中蛤蚌毒素基因表达和毒素产生的营养驱动调控。
IF 3.4 3区 生物学 Q1 MARINE & FRESHWATER BIOLOGY Pub Date : 2025-12-03 DOI: 10.1111/jpy.70115
Mehrzad Zare, Bruna Barçante, Juliana da Silva Martins Pimentel, Alessandra Giani

Raphidiopsis raciborskii is a diazotrophic cyanobacterium, globally distributed in aquatic environments and known for forming toxic blooms, thereby affecting ecosystem services. South American strains are producers of saxitoxins, potent neurotoxins harmful to humans and animals. This study examined the effect of nutrient availability on saxitoxin production in two toxic R. raciborskii strains. Reverse transcription–quantitative polymerase chain reaction (RT-qPCR) was used to investigate the transcriptional response of the saxitoxin sxtA4 gene under nitrogen and phosphorus gradients and the intracellular toxin concentration was measured by high performance liquid chromatography (HPLC). Results showed that the sxtA4 gene expression was generally upregulated at lower nutrient conditions. Positive correlations were observed among transcripts of sxtA4 and genes related to metabolic processes (ntcA, nifH, and pstS), an indication that nutrient stress may affect sxt gene regulation. Intracellular saxitoxin concentration increased slightly under moderate nitrogen reduction (10%), although not always significantly. Under phosphorus reduction, despite the observed upregulated transcription of sxtA4, total saxitoxin concentration significantly decreased, a possible consequence of hindered metabolic fitness. Interestingly, nutrient availability also affected the profiles of toxin analogs produced by R. raciborskii. Because different analogs exhibit variable toxicity, the presence of certain variants may enhance the toxic potential of an entire population under shifting environmental stressors. The responses observed in this study indicate the need for further investigations to identify the mechanisms controlling toxicity. This is particularly relevant as nutrient reduction may control cyanobacterial growth but not necessarily their toxin production.

raciborskii Raphidiopsis raciborskii是一种重氮营养蓝藻,全球分布于水生环境中,以形成有毒水华而闻名,从而影响生态系统服务。南美菌株产生对人类和动物有害的强力神经毒素——蛤蚌毒素。本研究考察了两种毒性鼠耳曲霉菌株营养有效性对蛤蚌毒素产生的影响。采用逆转录-定量聚合酶链反应(RT-qPCR)技术研究了氮磷梯度下蛤蚌毒素sxtA4基因的转录反应,并采用高效液相色谱(HPLC)法测定了胞内毒素浓度。结果表明,在低营养条件下,sxtA4基因表达普遍上调。sxtA4转录本与代谢过程相关基因(ntcA、nifH和pstS)呈正相关,表明营养胁迫可能影响sxtA4基因的调控。适度氮还原(10%)时,胞内蛤蚌毒素浓度略有升高,但并不总是显著升高。在磷还原条件下,尽管sxtA4转录上调,但总蛤蚌毒素浓度显著降低,这可能是代谢适应度受阻的结果。有趣的是,营养物质的有效性也影响了鼠耳鼠产生的毒素类似物的特征。由于不同的类似物表现出不同的毒性,某些变体的存在可能会增加整个种群在不断变化的环境压力下的毒性潜力。本研究中观察到的反应表明需要进一步研究以确定控制毒性的机制。这是特别相关的,因为营养减少可能控制蓝藻的生长,但不一定是他们的毒素生产。
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引用次数: 0
Morphology, phylogeny, and organelle genomics of three new Rhopalodia species (Rhopalodiales, Bacillariophyceae) 三个新种的形态、系统发育和细胞器基因组学研究(Rhopalodiales, diariophyceae)。
IF 3.4 3区 生物学 Q1 MARINE & FRESHWATER BIOLOGY Pub Date : 2025-12-02 DOI: 10.1111/jpy.70114
Kehui Li, Yun Zhou, Aimee Caye G. Chang, Mailor W. W. Amaral, Kyle G. Keepers, Fangru Nan, Xudong Liu, Jie Wang, Shulian Xie, John P. Kociolek, Qi Liu

Three new species of the freshwater diatom genus Rhopalodia from Yunnan province, China, have been described in this study based on a combination of morphological and molecular data. The diagnostic characteristics of Rhopalodia yunnanensis sp. nov. are the absence of secondary costae, and spines on its outer surface exhibit a flame-like morphology. Rhopalodia inflata sp. nov. is distinguished from other Rhopalodia species by the pronounced dorsal middle inflation, blunt-pointed spines, and areolae occluded by volae that consist of two or three c-shaped openings. The areolae of R. fuxianensis sp. nov. are covered by raised siliceous petal-like occlusions with one to two siliceous processes. Phylogenetic analysis based on the SSU rDNA and rbcL sequence data places the three new species within a distinct clade, clearly separated from other sequenced Rhopalodia species, including the generitype, R. gibba. In addition, the plastid, mitochondrial, and spheroid body genomes of the three novel species are presented and characterized in this paper.

根据形态和分子资料的结合,对云南淡水硅藻属(Rhopalodia)的三个新种进行了描述。云南棘虫的诊断特征是没有次生棘,外表面棘呈火焰状。11 . Rhopalodia inflata sp. 11 .与其他种类的Rhopalodia区别在于其明显的背部中间凸起,钝尖的刺和被由两个或三个c形开口组成的裂口封闭的乳晕。抚仙白蚁乳晕被一至两个硅质突起的花瓣状硅质闭塞物所覆盖。基于SSU rDNA和rbcL序列数据的系统发育分析表明,这三个新物种属于一个不同的分支,与其他测序的Rhopalodia物种(包括属型R. gibba)明显分开。此外,本文还介绍了这三个新物种的质体、线粒体和球体基因组。
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引用次数: 0
Stunted canopy: Marine forests under the thermal effluent of a nuclear power plant 发育不良的树冠:核电站排出的热液下的海洋森林。
IF 3.4 3区 生物学 Q1 MARINE & FRESHWATER BIOLOGY Pub Date : 2025-12-02 DOI: 10.1111/jpy.70113
Ivan M. Carneiro, Ana Paula A. Veloso, Fábio N. Demarqui, Maria Teresa M. Széchy

It has been well established that warming beyond certain thresholds can negatively affect the growth of canopy-forming macroalgae. However, most studies evaluating these effects have been conducted under controlled laboratory conditions. Observational studies investigating the impact of extreme temperatures on growth rates have been rare and typically limited to events such as marine heatwaves or areas affected by thermal pollution. The decline in vertical growth could be detrimental to the development and recovery of macroalgal canopies, significantly impacting habitat complexity. This study examined spatiotemporal variations in thallus height and vertical growth rates of benthic Sargassum species near the Brazilian Nuclear Power Station (BNPS). Samples were collected from sites exposed and unexposed to the thermal effluent of the BNPS, across different periods. Throughout the sampling periods, sites exposed to the thermal effluent consistently exhibited lower vertical growth rates than unexposed sites. Reduced thallus height was also observed at impacted sites during the first sampling period, whereas in the second period, this stunted canopy was observed only at the site closest to the thermal effluent outfall. This decline in vertical growth could reduce habitat complexity, potentially altering the structure of shallow rocky macroalgal communities. Even acknowledging the limitations in establishing cause–effect relationships in in situ studies, these results can provide important insights into the potential effects of warming on shallow, rocky-bottom communities and may offer valuable guidance for managing and monitoring Sargassum populations in the face of thermal pollution and global climate change.

已经确定的是,超过一定阈值的变暖会对树冠形成的大型藻类的生长产生负面影响。然而,大多数评估这些影响的研究都是在受控的实验室条件下进行的。调查极端温度对生长速度影响的观察性研究很少,而且通常仅限于海洋热浪或受热污染影响的地区等事件。垂直生长的下降可能不利于大藻冠层的发育和恢复,严重影响生境的复杂性。研究了巴西核电站(BNPS)附近底栖马尾藻物种的菌体高度和垂直生长率的时空变化。样本是在不同时期从暴露于和未暴露于BNPS热流出物的地点收集的。在整个采样期间,暴露于热废水的地点始终表现出比未暴露地点更低的垂直增长率。在第一次采样期间,在受影响的地点也观察到菌体高度降低,而在第二次采样期间,仅在最靠近热流出口的地点观察到这种发育不良的冠层。垂直生长的下降可能会降低栖息地的复杂性,潜在地改变浅层岩石大藻群落的结构。即使承认在原位研究中建立因果关系的局限性,这些结果也可以为了解变暖对浅层岩石底部社区的潜在影响提供重要见解,并可能为面对热污染和全球气候变化的马尾藻种群的管理和监测提供有价值的指导。
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引用次数: 0
Nuclear genome assembly and annotation for the phagotrophic green alga Nephroselmis pyriformis 吞噬型绿藻梨形肾自藻的核基因组组装与注释。
IF 3.4 3区 生物学 Q1 MARINE & FRESHWATER BIOLOGY Pub Date : 2025-12-01 DOI: 10.1111/jpy.70109
Sophie Charvet, Eunsoo Kim

Prasinophytes are a globally distributed, diverse polyphyletic group of photosynthetic green algae, displaying a combination of presumably ancestral traits for the Chloroplastida. The Nephroselmidophyceae is a prasinophyte clade comprising small biflagellate algae that includes the marine mixoplankton Nephroselmis pyriformis, which was previously shown to feed on bacteria, particularly under low concentrations of dissolved inorganic nutrients. Given its mixotrophic proclivities and phylogenetic position, N. pyriformis has the potential to provide insights into early green algal evolution and ecophysiology. In this study, we have presented a highly contiguous nuclear genome assembly for N. pyriformis. We acquired both Illumina and PacBio long-read data to assemble a 70.8-Mbp nuclear genome annotated with a total of 19,330 protein-coding genes. The genome is inferred to be haploid based on the base frequency distribution at variable sites, together with prior cell biological information from a related species. When compared with four other green algal genomes, N. pyriformis displayed a relatively large proportion of ortholog genes shared with the Chlorophyta. The nuclear genomic data presented here will be valuable for a range of studies, including green algal phylogenomics, genome evolution, and phago-mixotrophy.

Prasinophytes是一种全球分布的、多样化的多系光合绿藻,显示了绿藻的祖先特征的组合。肾selmidophyceae是一种由小型双鞭毛藻类组成的双鞭毛植物分支,其中包括海洋混合浮游生物肾selmis pyriformis,它以前被证明以细菌为食,特别是在低浓度溶解的无机营养物下。考虑到它的混合营养倾向和系统发育位置,N. pyriformis有可能提供早期绿藻进化和生态生理学的见解。在这项研究中,我们提出了一个高度连续的核基因组组装的梨形乳螨。我们获得了Illumina和PacBio的长读数据,组装了一个70.8 mbp的核基因组,共注释了19330个蛋白质编码基因。根据不同位点的碱基频率分布,以及来自相关物种的先前细胞生物学信息,推断该基因组为单倍体。与其他四种绿藻基因组相比,梨形乳藻显示出与绿藻共享的同源基因的比例相对较大。这里介绍的核基因组数据将对一系列研究有价值,包括绿藻系统基因组学,基因组进化和吞噬-混合营养。
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引用次数: 0
Helicosphaera carteri (Prymnesiophyceae) under high carbon dioxide: An experimental study 高二氧化碳条件下卡特螺蛳的实验研究。
IF 3.4 3区 生物学 Q1 MARINE & FRESHWATER BIOLOGY Pub Date : 2025-11-24 DOI: 10.1111/jpy.70103
Stefania Bianco, Manuela Bordiga, Gerald Langer, Patrizia Ziveri, Federica Cerino, Federica Relitti, Vincenzo Alessandro Laudicella, Andrea Di Giulio, Claudia Lupi

The coccolithophore Helicosphaera carteri is an understudied, yet ecologically and biogeochemically important, marine calcifier. Hence, its response to ocean acidification has implications for ecosystem function and the marine carbon cycle. Here we employed dilute batch cultures featuring a coupled C-system manipulation (295, 444, and 600 μatm CO2) to analyze the response of H. carteri in terms of growth rate and particulate carbon production, two key eco-physiological and biogeochemical parameters. We highlight that both growth rate and organic carbon production are CO2 limited at 295 µatm but are not proton inhibited at 600 µatm of CO2. This finding, combined with the maintenance of a stable inorganic production rate, places H. carteri among the coccolithophores less sensitive to seawater acidification. In addition, we tested a widely applied assumption underpinning the determination of carbon production, namely the constancy of particulate carbon quotas over the course of a dilute batch culture. We determined that the assumption holds true, an important validation of a method used in many publications.

球石藻(Helicosphaera carteri)是一种未被充分研究,但在生态和生物地球化学上具有重要意义的海洋钙化剂。因此,它对海洋酸化的响应对生态系统功能和海洋碳循环具有影响。本研究采用c -体系耦合培养(295、444和600 μatm CO2),分析了H. carteri对生长速度和颗粒碳产量这两个关键生态生理和生物地球化学参数的响应。我们强调,生长速率和有机碳产量在295µatm时都受到CO2限制,而在600µatm时则不受质子抑制。这一发现,再加上保持稳定的无机生产速率,使得H. carteri属于对海水酸化不太敏感的颗石藻。此外,我们还测试了一个广泛应用的假设,该假设支持碳产量的测定,即在稀释批次培养过程中颗粒碳配额的恒定性。我们确定这个假设是正确的,这是对许多出版物中使用的方法的重要验证。
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引用次数: 0
Breeding of triploid Undaria pinnatifida through crossing aposporous gametophytes derived from doubled haploid sporophytes with haploid gametophytes 双单倍体孢子体与单倍体配子体杂交获得无孢子配子体选育三倍体裙带菜。
IF 3.4 3区 生物学 Q1 MARINE & FRESHWATER BIOLOGY Pub Date : 2025-11-15 DOI: 10.1111/jpy.70107
Tifeng Shan, Yuqian Li

Undaria pinnatifida is an economically important kelp that is extensively farmed in East Asia. Increasingly severe ocean warming makes it urgent to breed new cultivars that are resistant to higher temperatures. Breeding of triploid sporophytes is a potential way to achieve this purpose. Diploid gametophytes were previously produced via apospory from heterozygous sporophytes; however, their sex was not pure, making it difficult to conduct a precise cross. In the present study, we addressed this issue by means of obtaining aposporous diploid gametophytes from doubled haploid sporophytes that were produced by self-fertilization of a monoicous gametophyte. The sex of the aposporous diploid gametophytes was determined to be male. We crossed the male diploid gametophytes with three female haploid gametophyte clonal lines and obtained three hybrid sporophyte lines, which were identified to be triploid using flow cytometry analysis. We cultivated the three triploid lines in the open sea and evaluated their economic traits in April. Their total length and blade length were significantly higher than the control cultivar despite their cultivation period being ~2 months shorter than that of the control. Obvious decay was observed in the control, but not in the triploid sporophytes, suggesting that they sustained growth in higher temperatures. The triploid sporophytes formed sporophylls but were not able to release spores in the reproductive season, and thus, they were determined to be sterile. This study provides a novel and precise means for breeding triploid sporophytes in U. pinnatifida, which is expected to be useful for breeding triploid cultivars superior to the current diploid cultivars.

裙带菜是一种经济上重要的海带,在东亚被广泛种植。日益严重的海洋变暖使得培育耐高温的新品种迫在眉睫。培育三倍体孢子体是实现这一目标的潜在途径。二倍体配子体以前是由杂合孢子体通过孢子囊产生的;然而,他们的性别并不纯洁,因此很难进行精确的交叉。在本研究中,我们通过从双单倍体孢子体中获得无孢子的二倍体配子体来解决这个问题。无孢子二倍体配子体的性别为雄性。将雄性二倍体配子体与3个雌性单倍体配子体无性系杂交,得到3个杂种孢子体,流式细胞术鉴定为三倍体。我们在公海上培育了3个三倍体系,并于4月对其经济性状进行了评价。栽培期比对照短2个月左右,但总长度和叶片长度均显著高于对照。在对照中观察到明显的腐烂,但在三倍体孢子体中没有观察到,这表明它们在较高的温度下持续生长。三倍体孢子体形成孢子叶,但在繁殖季节不能释放孢子,因此确定它们是不育的。本研究为羽田三倍体孢子体的选育提供了一种新颖而精确的方法,有望为培育优于现有二倍体的三倍体品种提供参考。
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引用次数: 0
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Journal of Phycology
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