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Sirtuin 4 Knockout Aggravates Sepsis-Induced Acute Liver Injury by Enhancing Mitochondrial Fission and Mitophagy in Hepatocytes. Sirtuin 4敲除通过增强肝细胞线粒体分裂和线粒体自噬加重脓毒症诱导的急性肝损伤
IF 4.2 3区 医学 Q2 CELL BIOLOGY Pub Date : 2026-01-08 eCollection Date: 2026-01-01 DOI: 10.1155/mi/7600668
Na Li, Dan Ma, Suxin Luo, An He, Shuting Chang

Background: Sepsis leads to multiorgan damage, with the liver being the main target. Sirtuin 4 (Sirt4) plays a regulatory role in mitochondrial function and metabolism, but its mechanism in liver injury caused by sepsis remains unclear.

Methods: The mouse model of liver injury caused by sepsis was established by cecal ligation and puncture (CLP) surgery. The degree of liver injury in wild-type (WT) and Sirt4 gene total knockout (Sirt4-KO) mice was compared by serum AST, alanine aminotransferase (ALT), and histological analysis. The expression of mitophagy and mitochondrial dynamic indicators was detected by biochemical experiments.

Results: Liver injury in Sirt4-KO mice was more severe than that in WT mice after CLP, manifested as significant upregulation of mitophagy and mitochondrial dynamics imbalance. Mechanistically, Sirt4 deficiency increases mitochondrial fission and mitophagy, thereby leading to cellular damage.

Conclusions: Sirt4 knockout (KO) aggravates liver injury in sepsis through increasing mitochondrial fission and mitophagy, which indicates a promising direction for future clinical treatment.

背景:脓毒症导致多器官损害,以肝脏为主要目标。Sirtuin 4 (Sirt4)在线粒体功能和代谢中起调节作用,但其在脓毒症肝损伤中的机制尚不清楚。方法:采用盲肠结扎穿刺法(CLP)建立小鼠脓毒症肝损伤模型。通过血清AST、谷丙转氨酶(ALT)和组织学分析比较野生型(WT)和Sirt4基因全敲除(Sirt4- ko)小鼠的肝损伤程度。生化实验检测线粒体自噬和线粒体动力学指标的表达。结果:CLP后Sirt4-KO小鼠肝损伤较WT小鼠严重,表现为线粒体自噬显著上调,线粒体动力学失衡。从机制上讲,Sirt4缺乏增加线粒体分裂和线粒体自噬,从而导致细胞损伤。结论:Sirt4基因敲除(KO)通过增加线粒体分裂和线粒体自噬而加重脓毒症的肝损伤,为今后的临床治疗指明了一个有希望的方向。
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引用次数: 0
ALAS2 Prevents Neonatal Necrotizing Enterocolitis by Improving Ferroptosis in Intestinal Epithelial Cells Through Inhibition of Oxidative Stress. ALAS2通过抑制氧化应激改善肠上皮细胞的铁凋亡,预防新生儿坏死性小肠结肠炎。
IF 4.2 3区 医学 Q2 CELL BIOLOGY Pub Date : 2026-01-07 eCollection Date: 2026-01-01 DOI: 10.1155/mi/6683001
Zenghui Hao, Jinbao Han, Ting Yao, Zheng Zhao, Wei Fan, Zaiqun Jiang, Yunting Wang, Xiaoqian Yang, Zhilin Xu

Neonatal necrotizing enterocolitis (NEC) is an intestinal disease that occurs in the neonatal period. The purpose of this study was to investigate the role of 5'-aminolevulinate synthase 2 (ALAS2) in NEC-induced intestinal injury. In a neonatal mouse, NEC model was induced by high-osmolarity formula and hypoxia-cold stress, and ALAS2 expression was significantly downregulated in ileal tissues (p  < 0.01), coinciding with elevated oxidative stress (increased Fe2+/malondialdehyde [MDA] and decreased superoxide dismutase [SOD]), inflammation (increased TNF-α/interferon-gamma [IFN-γ]), and ferroptosis activation (increased acyl-CoA synthetase long-chain family member 4 [ACSL4] and decreased ferritin heavy chain 1 [FTH1] with mitochondrial shrinkage). In vitro, tumor necrosis factor-alpha (TNF-α)/IFN-γ-treated intestinal epithelial cell (IEC) exhibited progressive ALAS2 suppression and increased necrosis. Crucially, lentivirus-mediated ALAS2 overexpression reversed these effects, reducing cell necrosis by 22% while suppressing ferroptosis markers (Fe2+ accumulation, lipid reactive oxygen species [ROS], and mitochondrial depolarization) and oxidative damage (decreased MDA and restored glutathione [GSH]/catalase [CAT]/SOD). Untargeted metabolomics further revealed ALAS2-mediated modulation of nutrient metabolism and redox pathways. Collectively, ALAS2 ameliorates NEC by blocking oxidative stress-driven ferroptosis in IECs, proposing a novel therapeutic target.

新生儿坏死性小肠结肠炎(NEC)是一种发生在新生儿期的肠道疾病。本研究旨在探讨5′-氨基乙酰丙酸合成酶2 (ALAS2)在nec诱导的肠道损伤中的作用。在新生小鼠中,高渗透压和低氧冷应激诱导NEC模型,ALAS2在回肠组织中表达显著下调(p < 0.01),与氧化应激升高(Fe2+/丙二醛[MDA]升高和超氧化物歧化酶[SOD]降低)、炎症升高(TNF-α/干扰素γ [IFN-γ]升高)、和铁下垂激活(酰基辅酶a合成酶长链家族成员4 [ACSL4]增加,铁蛋白重链1 [FTH1]减少,线粒体收缩)。在体外,肿瘤坏死因子-α (TNF-α)/IFN-γ处理的肠上皮细胞(IEC)表现出进行性ALAS2抑制和坏死增加。至关重要的是,慢病毒介导的ALAS2过表达逆转了这些作用,减少了22%的细胞坏死,同时抑制了铁死亡标志物(铁2+积累、脂质活性氧(ROS)和线粒体去极化)和氧化损伤(降低MDA和恢复谷胱甘肽[GSH]/过氧化氢酶[CAT]/SOD)。非靶向代谢组学进一步揭示了alas2介导的营养代谢和氧化还原途径的调节。总的来说,ALAS2通过阻断IECs中氧化应激驱动的铁下垂来改善NEC,提出了一个新的治疗靶点。
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引用次数: 0
Recombinant Thrombomodulin Domain 1 Promotes Diabetic Corneal Wound Healing by Inhibiting HMGB1 Production and NLRP3 Inflammasome. 重组血栓调节蛋白结构域1通过抑制HMGB1和NLRP3炎性体促进糖尿病角膜创面愈合。
IF 4.2 3区 医学 Q2 CELL BIOLOGY Pub Date : 2026-01-06 eCollection Date: 2026-01-01 DOI: 10.1155/mi/8089754
Kuan-Ying Chen, I-Chen Peng, Hua-Lin Wu, Cheng-Hsiang Kuo, Yi-Hsun Huang

Purpose: To investigate the therapeutic potential of recombinant thrombomodulin domain 1 (rTMD1) in diabetic corneal wound healing and to elucidate its underlying mechanisms using in vitro and in vivo models.

Methods: rTMD1 was produced using the Pichia pastoris expression system and purified. Human corneal epithelial cells (HCECs) were cultured under normal glucose (NG) and high glucose (HG) conditions, with or without rTMD1 treatment. Wound healing rates were evaluated using a scratch assay. Diabetes was induced in C57BL/6 mice via streptozotocin (STZ) injections. Corneal wounds were created and treated with rTMD1 or PBS, and wound healing was assessed via fluorescein staining. Inflammatory markers, including HMGB1, TLR4, NLRP3, and IL-1β, were analyzed via quantitative PCR (qPCR), Western blot, and immunofluorescence staining.

Results: In vitro, HCECs treated with rTMD1 under HG conditions demonstrated a higher wound healing rate compared to untreated cells (p = 0.0049). In vivo, rTMD1 significantly enhanced corneal wound healing in diabetic mice, with faster wound closure compared to PBS-treated controls at 24 h (p = 0.005) and 48 h (p < 0.0001). rTMD1 treatment reduced the expression of HMGB1, TLR4, NLRP3, and IL-1β at both mRNA and protein levels, indicating suppression of inflammation.

Conclusions: Topical application of rTMD1 promotes corneal epithelial wound healing in diabetic conditions by inhibiting HMGB1/TLR4/NLRP3-mediated inflammation. rTMD1 holds promise as a potential therapeutic agent for diabetic keratopathy, although further studies are needed to validate its clinical efficacy and safety.

目的:通过体外和体内模型研究重组血栓调节蛋白结构域1 (rTMD1)在糖尿病角膜创面愈合中的治疗潜力,并阐明其潜在机制。方法:采用毕赤酵母表达系统制备rTMD1并进行纯化。在正常葡萄糖(NG)和高葡萄糖(HG)条件下培养人角膜上皮细胞(HCECs),并给予或不给予rTMD1处理。采用划痕法评估伤口愈合率。采用链脲佐菌素(STZ)诱导C57BL/6小鼠糖尿病。用rTMD1或PBS处理角膜创面,荧光素染色评估创面愈合情况。通过定量PCR (qPCR)、Western blot和免疫荧光染色分析炎症标志物HMGB1、TLR4、NLRP3和IL-1β。结果:体外,HG条件下rTMD1处理的HCECs伤口愈合率高于未处理的细胞(p = 0.0049)。在体内,rTMD1显著促进糖尿病小鼠角膜伤口愈合,与pbs处理的对照组相比,伤口愈合在24小时(p = 0.005)和48小时(p < 0.0001)更快。rTMD1治疗降低HMGB1、TLR4、NLRP3和IL-1β mRNA和蛋白水平的表达,表明炎症得到抑制。结论:局部应用rTMD1可抑制HMGB1/TLR4/ nlrp3介导的炎症,促进糖尿病患者角膜上皮创面愈合。rTMD1有望成为糖尿病角膜病变的潜在治疗剂,尽管需要进一步的研究来验证其临床疗效和安全性。
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引用次数: 0
Single-Cell Transcriptomics Reveal Microenvironment Alterations in Canine Peri-Implantitis. 单细胞转录组学揭示犬种植体周围炎的微环境改变。
IF 4.2 3区 医学 Q2 CELL BIOLOGY Pub Date : 2025-12-31 eCollection Date: 2025-01-01 DOI: 10.1155/mi/9937505
Ming Wang, Dong Zhang, Chunhui Liao, Daner Wu, Ningbo Geng, Yixin Xia, Yu Chen, Songling Chen, Wei Peng

Background: Peri-implantitis, a major contributor to dental implant failure, lacks comprehensive insights into tissue-specific heterogeneity as current researches predominantly focus on the whole peri-implant tissue rather than distinct molecular and cellular dynamics in gingiva and alveolar bone microenvironments. Furthermore, ethical challenges hinder the acquisition of healthy peri-implant tissues, limiting our understanding of peri-implantitis progression and the development of targeted therapies.

Methods: We established a controlled peri-implantitis model in beagle dogs, enabling ethical collection of healthy control tissues. Single-cell RNA sequencing (scRNA-seq) transcriptomics profiling was conducted on gingiva and alveolar bone tissues from diseased and healthy controls. Additionally, flow cytometry was utilized to further verify the identified subclusters and their involvement in peri-implantitis.

Results: Single-cell transcriptomic profiling unveiled a pronounced expansion of inflammation-associated cellular subsets in both gingival and alveolar bone microenvironments during peri-implantitis. Gingival tissues exhibited marked expansions in IL6+/IL18BP+ endothelial cell and CXCL8+ fibroblast, whereas APOD+ fibroblast dominated in peri-implantitis bone tissues. Gene-level profiling further identified upregulated pro-inflammatory chemokines (CXCL8, CXCL17, CCL24) within gingiva IL18BP+ endothelial cells. Notably, we discovered a unique ligand-receptor interaction C3 (APOD+ fibroblast)-C3AR1 (monocyte/macrophage) in alveolar bone tissue, implicating complement-dependent signaling in immune crosstalk.

Conclusions: Our study provides the first comparative atlas of soft/hard tissue remodeling in peri-implantitis at single-cell resolution. The expansion of IL6+/IL18BP+ endothelial cell and CXCL8+ fibroblast in gingiva, alongside APOD+ fibroblast-driven C3-C3AR1 signaling in alveolar bone, highlights distinct microenvironmental reprogramming between soft and hard tissues. These findings not only identify potential therapeutic targets but also validate the translational relevance of the canine model for peri-implantitis research.

背景:种植体周围炎是导致种植体失败的主要原因,目前的研究主要集中在整个种植体周围组织,而不是牙龈和牙槽骨微环境中独特的分子和细胞动力学,因此缺乏对组织特异性异质性的全面认识。此外,伦理挑战阻碍了健康种植体周围组织的获取,限制了我们对种植体周围炎进展的理解和靶向治疗的发展。方法:建立比格犬种植体周围炎对照模型,采集健康对照组织。对患病对照和健康对照的牙龈和牙槽骨组织进行了单细胞RNA测序(scRNA-seq)转录组学分析。此外,流式细胞术被用于进一步验证鉴定的亚群及其与种植体周围炎的关系。结果:单细胞转录组分析揭示了种植体周围炎期间牙龈和牙槽骨微环境中炎症相关细胞亚群的显著扩张。牙龈组织中IL6+/IL18BP+内皮细胞和CXCL8+成纤维细胞明显扩增,而APOD+成纤维细胞在种植体周围骨组织中占主导地位。基因水平分析进一步确定了牙龈IL18BP+内皮细胞中上调的促炎趋化因子(CXCL8, CXCL17, CCL24)。值得注意的是,我们在肺泡骨组织中发现了一种独特的配体-受体相互作用C3 (APOD+成纤维细胞)-C3AR1(单核细胞/巨噬细胞),涉及免疫串音中的补体依赖性信号。结论:我们的研究首次在单细胞分辨率上提供了种植体周围炎软硬组织重塑的比较图谱。牙龈中IL6+/IL18BP+内皮细胞和CXCL8+成纤维细胞的扩增,以及APOD+成纤维细胞驱动的牙槽骨中C3-C3AR1信号传导,突出了软硬组织之间不同的微环境重编程。这些发现不仅确定了潜在的治疗靶点,而且验证了犬模型在种植体周围炎研究中的翻译相关性。
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引用次数: 0
Emerging Topics and Trends in Neutrophil Extracellular Traps in ARDS: A Bibliometric and Visual Analysis. ARDS中性粒细胞胞外陷阱的新主题和趋势:文献计量学和视觉分析。
IF 4.2 3区 医学 Q2 CELL BIOLOGY Pub Date : 2025-12-29 eCollection Date: 2025-01-01 DOI: 10.1155/mi/1015955
Yike Wang, Zixin Luo, Shaoyu Fu, Qianduo Li, Zhiyuan Zhang, Nan Huang, Kang Zou, Lingyan Zou

Background: Acute respiratory distress syndrome (ARDS) is a critical illness with significant impacts on human respiratory health. Neutrophil extracellular traps (NETs), secreted by neutrophils, play dual roles in immune defense and tissue inflammation. Recent studies have highlighted the association between NETs and ARDS, yet no comprehensive bibliometric analysis has been conducted in this field. This study aims to analyze the research progress and evolving hot spots related to NETs in ARDS through bibliometric methods.

Methods: Articles published between 2011 and 2024 were retrieved from the Web of Science Core Collection (WoSCC), PubMed, and Embase. Data analysis was performed using visualization tools such as VOSviewer, CiteSpace, and Microsoft Office Excel 2021.

Results: A total of 328 articles were analyzed. The annual publication trend in this field has shown a steady increase, with China and the United States leading in research output. Frontiers in Immunology stands out for its high publication volume and citation count, indicating strong reference value. The most prolific author is Zhang, Hao from Zhongshan Hospital, Fudan University, while Egeblad, Mikala from Cold Spring Harbor Laboratory holds the highest citation count. Inflammatory response is a research focus in this field, and the association between NETs and thrombus formation represents an emerging research hotspot within the domain. Research and development of NETs-targeted therapies for acute lung injury (ALI) and ARDS is an important direction for future research.

Conclusion: This bibliometric analysis comprehensively summarizes research progress and hotspot evolution in NETs-related ARDS studies, providing valuable insights for researchers and inspiring future research directions.

背景:急性呼吸窘迫综合征(Acute respiratory distress syndrome, ARDS)是严重影响人类呼吸系统健康的危重疾病。中性粒细胞胞外陷阱(NETs)由中性粒细胞分泌,在免疫防御和组织炎症中起双重作用。最近的研究强调了NETs与ARDS之间的联系,但在这一领域尚未进行全面的文献计量分析。本研究旨在通过文献计量学方法,分析ARDS中网络相关的研究进展及发展热点。方法:检索Web of Science Core Collection (WoSCC)、PubMed和Embase中2011 - 2024年间发表的文章。使用VOSviewer、CiteSpace、Microsoft Office Excel 2021等可视化工具进行数据分析。结果:共分析328篇文献。该领域的年度发表趋势呈稳步增长趋势,中国和美国的研究产出处于领先地位。《免疫学前沿》以其高出版量和高引用量而著称,具有很强的参考价值。论文最多产的作者是复旦大学中山医院的张浩,被引次数最多的作者是冷泉港实验室的Egeblad, Mikala。炎症反应是该领域的研究热点,NETs与血栓形成的关联是该领域的新兴研究热点。研究和开发nets靶向治疗急性肺损伤(ALI)和ARDS是未来研究的重要方向。结论:本文献计量学分析全面总结了nets相关ARDS研究的研究进展和热点演变,为研究人员提供了有价值的见解,并启发了未来的研究方向。
{"title":"Emerging Topics and Trends in Neutrophil Extracellular Traps in ARDS: A Bibliometric and Visual Analysis.","authors":"Yike Wang, Zixin Luo, Shaoyu Fu, Qianduo Li, Zhiyuan Zhang, Nan Huang, Kang Zou, Lingyan Zou","doi":"10.1155/mi/1015955","DOIUrl":"10.1155/mi/1015955","url":null,"abstract":"<p><strong>Background: </strong>Acute respiratory distress syndrome (ARDS) is a critical illness with significant impacts on human respiratory health. Neutrophil extracellular traps (NETs), secreted by neutrophils, play dual roles in immune defense and tissue inflammation. Recent studies have highlighted the association between NETs and ARDS, yet no comprehensive bibliometric analysis has been conducted in this field. This study aims to analyze the research progress and evolving hot spots related to NETs in ARDS through bibliometric methods.</p><p><strong>Methods: </strong>Articles published between 2011 and 2024 were retrieved from the Web of Science Core Collection (WoSCC), PubMed, and Embase. Data analysis was performed using visualization tools such as VOSviewer, CiteSpace, and Microsoft Office Excel 2021.</p><p><strong>Results: </strong>A total of 328 articles were analyzed. The annual publication trend in this field has shown a steady increase, with China and the United States leading in research output. Frontiers in Immunology stands out for its high publication volume and citation count, indicating strong reference value. The most prolific author is Zhang, Hao from Zhongshan Hospital, Fudan University, while Egeblad, Mikala from Cold Spring Harbor Laboratory holds the highest citation count. Inflammatory response is a research focus in this field, and the association between NETs and thrombus formation represents an emerging research hotspot within the domain. Research and development of NETs-targeted therapies for acute lung injury (ALI) and ARDS is an important direction for future research.</p><p><strong>Conclusion: </strong>This bibliometric analysis comprehensively summarizes research progress and hotspot evolution in NETs-related ARDS studies, providing valuable insights for researchers and inspiring future research directions.</p>","PeriodicalId":18371,"journal":{"name":"Mediators of Inflammation","volume":"2025 ","pages":"1015955"},"PeriodicalIF":4.2,"publicationDate":"2025-12-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12767411/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145912258","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comprehensive Analysis of the Correlation Between Immune-Inflammatory Biomarkers and Intestinal Necrosis in Patients With Acute Intestinal Ischemia. 急性肠缺血患者免疫炎症生物标志物与肠坏死相关性的综合分析。
IF 4.2 3区 医学 Q2 CELL BIOLOGY Pub Date : 2025-12-29 eCollection Date: 2025-01-01 DOI: 10.1155/mi/8701105
Yu Tian, Feifan Wang, Mingshuo Zhang, Rui Ding, Yimin Wang

Background: The relationship between immune-inflammatory biomarkers, including neutrophil-to-lymphocyte ratio (NLR), platelet-to-lymphocyte ratio (PLR), and systemic immune-inflammation index (SII) and intestinal necrosis in different types of acute intestinal ischemia remains unclear.

Methods: A total of 138 patients with acute intestinal ischemia were divided into a nonnecrosis group (n = 65) and a necrosis group (n = 73). Least absolute shrinkage and selection operator (Lasso)-logistic regression model was used to identify independent risk factors for intestinal necrosis. Multivariate logistic regression was conducted to assess the associations between NLR and SII levels and intestinal necrosis. Sensitivity analyses were performed using smooth curve fitting, threshold effect analysis, subgroup analysis, and propensity score matching (PSM). .

Results: The optimal thresholds of NLR and SII for differentiating intestinal necrosis were 8.85 and 1492.11, respectively, while PLR showed no significant association. In Lasso-logistic regression analysis, vascular intestinal ischemia, NLR ≥ 8.85, SII≥ 1492.11, C-reactive protein (CRP), and D-dimer > 0.5 mg/L were independent risk factors for intestinal necrosis. After adjusting for potential confounding variables, the multivariate logistic regression analysis showed a positive correlation between natural logarithm (Ln)-NLR (OR = 20.187, 95% CI = 3.788-107.578, p  < 0.001) and Ln-SII (OR = 5.375, 95% CI = 1.141-25.313, p  < 0.033) and intestinal necrosis. Subgroup analysis showed a significant interaction between NLR, intestinal necrosis, and coronary heart disease (p interaction = 0.016). Smooth curve fitting indicated the relationship between Ln-NLR and Ln-SII and intestinal necrosis was nonlinear, with inflection points at 1.78 (NLR = 5.93) and 7.32 (SII = 1510.20), respectively. When NLR > 5.93 or SII < 1510.20, the risk of intestinal necrosis significantly increased. The associations remained robust after PSM.

Conclusion: This study demonstrates that elevated levels of NLR and SII are significantly associated with intestinal necrosis, suggesting that these biomarkers may help identify patients at higher risk of intestinal necrosis in acute intestinal ischemia. However, prospective studies are needed to validate their predictive value.

背景:在不同类型的急性肠缺血中,免疫炎症生物标志物,包括中性粒细胞与淋巴细胞比值(NLR)、血小板与淋巴细胞比值(PLR)和全身免疫炎症指数(SII)与肠坏死的关系尚不清楚。方法:138例急性肠缺血患者分为非坏死组(n = 65)和坏死组(n = 73)。最小绝对收缩和选择算子(Lasso)-logistic回归模型用于确定肠坏死的独立危险因素。采用多因素logistic回归评估NLR和SII水平与肠坏死之间的关系。采用平滑曲线拟合、阈值效应分析、亚组分析和倾向评分匹配(PSM)进行敏感性分析。结果:NLR和SII鉴别肠坏死的最佳阈值分别为8.85和1492.11,而PLR无显著相关性。在Lasso-logistic回归分析中,血管性肠缺血、NLR≥8.85、SII≥1492.11、c反应蛋白(CRP)、d -二聚体> 0.5 mg/L是肠坏死的独立危险因素。在校正潜在混杂变量后,多因素logistic回归分析显示,Ln -NLR (OR = 20.187, 95% CI = 3.788 ~ 107.578, p < 0.001)和Ln- sii (OR = 5.375, 95% CI = 1.141 ~ 25.313, p < 0.033)与肠坏死呈正相关。亚组分析显示NLR、肠坏死和冠心病之间存在显著的相互作用(p相互作用= 0.016)。光滑曲线拟合显示,Ln-NLR和Ln-SII与肠坏死呈非线性关系,其拐点分别为1.78 (NLR = 5.93)和7.32 (SII = 1510.20)。结论:本研究表明NLR和SII水平升高与肠坏死显著相关,提示这些生物标志物可能有助于识别急性肠缺血中肠坏死风险较高的患者。然而,需要前瞻性研究来验证其预测价值。
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引用次数: 0
Glioblastoma Prognosis and Therapeutic Response Predicted by a Cancer-Associated Fibroblasts Risk Score. 肿瘤相关成纤维细胞风险评分预测胶质母细胞瘤预后和治疗反应。
IF 4.2 3区 医学 Q2 CELL BIOLOGY Pub Date : 2025-12-28 eCollection Date: 2025-01-01 DOI: 10.1155/mi/4342537
Hongyi Zhou, Xi Yang, Wen Zhao, Yingqi Huang, Zhixiang Zhang, Jincheng Jiang, Xinchen Jiang, Bingxuan Ren, Kaixia Yang, Liu Jinhui

Background: Cancer-associated fibroblasts (CAFs), as a key component of the tumor microenvironment, have not been systematically elucidated in glioblastoma (GBM). Our study aims to develop a prognostic model integrating CAFs-related features, with the goal of providing new insights for precise stratification and optimized treatment strategies for GBM patients.

Methods: Utilizing GBM-related data from reputable public databases, we utilized the Seurat package in R to analyze single-cell RNA sequencing (scRNA-seq) data for the characterization of CAFs in GBM. We identified CAFs phenotypes and screened for key CAFs-related genes significantly associated with patient prognosis. Using regression analysis, we constructed a CAFs-based risk score, which was subsequently validated in multiple independent cohorts. A nomogram integrating the risk score and clinicopathological features was also developed. Furthermore, we systematically evaluated the prognostic and therapeutic relevance of the model in GBM patients through multi-dimensional analyses, including gene mutation profiling, pathway enrichment analysis, immune infiltration, immunotherapy response, and drug sensitivity analysis.

Results: A total of six CAFs-related genes (FAM241B, LSM2, IGFBP2, LOXL1, OSMR, and STOX1) were identified as significantly associated with GBM prognosis. We used it to construct the CAFs-based risk score model, which demonstrated robust prognostic performance across multiple cohorts and served as an independent predictor of overall survival in GBM patients, efficiently categorizing groups into high and low risk. By integrating clinical features, the nomogram model significantly increased predictive accuracy and reliability. Analytical results indicated a statistically significant association between the computed risk score and the level of immune cell infiltration. Furthermore, the established prognostic model exhibited robust efficacy in predicting patient outcomes following conventional targeted treatments as well as immunotherapeutic interventions.

Conclusions: This study introduces a GBM risk profiling framework and accompanying nomogram, offering exceptional accuracy in prognostic prediction for GBM. The framework and nomogram provide valuable insights into the roles of CAFs and key genes in GBM progression and immunity, and extend beyond classification by offering promising avenues for deciphering tumor mutations, mapping immune landscapes, refining drug predictions, and forecasting the efficacy of immunotherapeutic interventions. These findings have the potential to significantly improve personalized treatment strategies and patient outcomes.

背景:肿瘤相关成纤维细胞(CAFs)作为肿瘤微环境的关键组成部分,在胶质母细胞瘤(GBM)中尚未被系统地阐明。我们的研究旨在建立一个整合cafs相关特征的预后模型,为GBM患者的精确分层和优化治疗策略提供新的见解。方法:利用来自知名公共数据库的GBM相关数据,我们使用R中的Seurat软件包分析单细胞RNA测序(scRNA-seq)数据,以表征GBM中的CAFs。我们确定了CAFs表型并筛选了与患者预后显著相关的关键CAFs相关基因。使用回归分析,我们构建了一个基于cafs的风险评分,随后在多个独立队列中进行验证。综合风险评分和临床病理特征的nomogram也被开发出来。此外,我们通过多维分析,包括基因突变谱、途径富集分析、免疫浸润、免疫治疗反应和药物敏感性分析,系统地评估了该模型在GBM患者中的预后和治疗相关性。结果:共有6个cafs相关基因(FAM241B、LSM2、IGFBP2、LOXL1、OSMR和STOX1)与GBM预后显著相关。我们用它来构建基于cafs的风险评分模型,该模型在多个队列中显示出稳健的预后表现,并作为GBM患者总生存的独立预测因子,有效地将组分为高风险和低风险。通过整合临床特征,nomogram模型显著提高了预测的准确性和可靠性。分析结果表明,计算出的风险评分与免疫细胞浸润水平之间存在统计学上显著的关联。此外,所建立的预后模型在预测常规靶向治疗和免疫治疗干预后的患者预后方面表现出强大的功效。结论:本研究引入了GBM风险分析框架和随附的nomogram,为GBM的预后预测提供了卓越的准确性。该框架和nomogram为CAFs和关键基因在GBM进展和免疫中的作用提供了有价值的见解,并通过提供破译肿瘤突变、绘制免疫景观、改进药物预测和预测免疫治疗干预效果的有希望的途径,扩展到分类之外。这些发现有可能显著改善个性化治疗策略和患者预后。
{"title":"Glioblastoma Prognosis and Therapeutic Response Predicted by a Cancer-Associated Fibroblasts Risk Score.","authors":"Hongyi Zhou, Xi Yang, Wen Zhao, Yingqi Huang, Zhixiang Zhang, Jincheng Jiang, Xinchen Jiang, Bingxuan Ren, Kaixia Yang, Liu Jinhui","doi":"10.1155/mi/4342537","DOIUrl":"10.1155/mi/4342537","url":null,"abstract":"<p><strong>Background: </strong>Cancer-associated fibroblasts (CAFs), as a key component of the tumor microenvironment, have not been systematically elucidated in glioblastoma (GBM). Our study aims to develop a prognostic model integrating CAFs-related features, with the goal of providing new insights for precise stratification and optimized treatment strategies for GBM patients.</p><p><strong>Methods: </strong>Utilizing GBM-related data from reputable public databases, we utilized the Seurat package in R to analyze single-cell RNA sequencing (scRNA-seq) data for the characterization of CAFs in GBM. We identified CAFs phenotypes and screened for key CAFs-related genes significantly associated with patient prognosis. Using regression analysis, we constructed a CAFs-based risk score, which was subsequently validated in multiple independent cohorts. A nomogram integrating the risk score and clinicopathological features was also developed. Furthermore, we systematically evaluated the prognostic and therapeutic relevance of the model in GBM patients through multi-dimensional analyses, including gene mutation profiling, pathway enrichment analysis, immune infiltration, immunotherapy response, and drug sensitivity analysis.</p><p><strong>Results: </strong>A total of six CAFs-related genes (FAM241B, LSM2, IGFBP2, LOXL1, OSMR, and STOX1) were identified as significantly associated with GBM prognosis. We used it to construct the CAFs-based risk score model, which demonstrated robust prognostic performance across multiple cohorts and served as an independent predictor of overall survival in GBM patients, efficiently categorizing groups into high and low risk. By integrating clinical features, the nomogram model significantly increased predictive accuracy and reliability. Analytical results indicated a statistically significant association between the computed risk score and the level of immune cell infiltration. Furthermore, the established prognostic model exhibited robust efficacy in predicting patient outcomes following conventional targeted treatments as well as immunotherapeutic interventions.</p><p><strong>Conclusions: </strong>This study introduces a GBM risk profiling framework and accompanying nomogram, offering exceptional accuracy in prognostic prediction for GBM. The framework and nomogram provide valuable insights into the roles of CAFs and key genes in GBM progression and immunity, and extend beyond classification by offering promising avenues for deciphering tumor mutations, mapping immune landscapes, refining drug predictions, and forecasting the efficacy of immunotherapeutic interventions. These findings have the potential to significantly improve personalized treatment strategies and patient outcomes.</p>","PeriodicalId":18371,"journal":{"name":"Mediators of Inflammation","volume":"2025 ","pages":"4342537"},"PeriodicalIF":4.2,"publicationDate":"2025-12-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12767406/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145912200","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Risk Assessment of Venous Thromboembolism in Neurocritical Patients: Construction and Validation of a Clinical Prediction Model. 神经危重症患者静脉血栓栓塞的风险评估:临床预测模型的构建和验证。
IF 4.2 3区 医学 Q2 CELL BIOLOGY Pub Date : 2025-12-26 eCollection Date: 2025-01-01 DOI: 10.1155/mi/8133560
Meili Zhou, Rui Wang, Longhai Zhu, Chentao Wang, Weidong Hu, Jijun Shi

Background/objective: Venous thromboembolism (VTE) remains a significant challenge in neurocritical care, with limited tailored risk assessment tools available for clinical practice. This study aimed to develop and validate a practical prediction model to support VTE prevention strategies in neurocritical patients.

Methods: A total of 605 neurocritical patients were retrospectively enrolled in the neurologic intensive care unit (NICU) from May 2022 to April 2024. The eligible patients were randomly divided into a training dataset and a testing dataset in a ratio of 7:3. Variables with significant univariate effects in the training dataset were selected for multivariable stepwise regression analysis. The model fitting goodness was tested using the Hosmer-Lemeshow test, the area under the receiver operating characteristic (ROC) curve (AUC) was used to evaluate the model discrimination, and decision curve analysis (DCA) was used to test the clinical value of the model.

Results: The final model identified age, length of stay in the NICU, activated partial thromboplastin time (APTT), D-dimer, tracheotomy duration, pulmonary infection, antibiotic use, and dehydrating agents as key predictors. The nomogram demonstrated excellent discrimination (AUC 0.763, 95% CI: 0.714-0.811 in the training dataset; AUC 0.809, 95% CI: 0.732-0.885 in the testing cohort), strong calibration (Hosmer-Lemeshow test: p = 0.126 [training]; p = 0.823 [testing]) and consistent clinical net benefit across prevention thresholds (10%-40% risk probability).

Conclusions: The risk prediction model developed in this study can effectively predict VTE occurrence in neurocritical patients with good discrimination and clinical utility, providing a valuable tool for identifying high-risk individuals and performing early prevention and treatment measures.

背景/目的:静脉血栓栓塞(VTE)仍然是神经危重症护理的一个重大挑战,临床实践中可用于定制的风险评估工具有限。本研究旨在开发和验证一个实用的预测模型,以支持神经危重症患者静脉血栓栓塞的预防策略。方法:回顾性分析2022年5月至2024年4月在NICU(神经内科重症监护病房)住院的605例神经危重症患者。将符合条件的患者按7:3的比例随机分为训练数据集和测试数据集。选取训练数据集中单变量效应显著的变量进行多变量逐步回归分析。采用Hosmer-Lemeshow检验模型拟合优度,采用受试者工作特征曲线下面积(AUC)评价模型判别性,采用决策曲线分析(DCA)检验模型的临床价值。结果:最终模型确定年龄、NICU住院时间、活化部分凝血活素时间(APTT)、d -二聚体、气管切开时间、肺部感染、抗生素使用和脱水剂是关键预测因素。nomogram表现出极好的鉴别性(训练数据集中AUC 0.763, 95% CI: 0.714-0.811;测试队列中AUC 0.809, 95% CI: 0.732-0.885),强校准(Hosmer-Lemeshow检验:p = 0.126 [training]; p = 0.823 [testing]),跨预防阈值的临床净收益一致(10%-40%风险概率)。结论:本研究建立的风险预测模型能有效预测神经危重症患者静脉血栓栓塞的发生,具有良好的辨别性和临床实用性,为识别高危人群,及早采取预防和治疗措施提供了有价值的工具。
{"title":"Risk Assessment of Venous Thromboembolism in Neurocritical Patients: Construction and Validation of a Clinical Prediction Model.","authors":"Meili Zhou, Rui Wang, Longhai Zhu, Chentao Wang, Weidong Hu, Jijun Shi","doi":"10.1155/mi/8133560","DOIUrl":"10.1155/mi/8133560","url":null,"abstract":"<p><strong>Background/objective: </strong>Venous thromboembolism (VTE) remains a significant challenge in neurocritical care, with limited tailored risk assessment tools available for clinical practice. This study aimed to develop and validate a practical prediction model to support VTE prevention strategies in neurocritical patients.</p><p><strong>Methods: </strong>A total of 605 neurocritical patients were retrospectively enrolled in the neurologic intensive care unit (NICU) from May 2022 to April 2024. The eligible patients were randomly divided into a training dataset and a testing dataset in a ratio of 7:3. Variables with significant univariate effects in the training dataset were selected for multivariable stepwise regression analysis. The model fitting goodness was tested using the Hosmer-Lemeshow test, the area under the receiver operating characteristic (ROC) curve (AUC) was used to evaluate the model discrimination, and decision curve analysis (DCA) was used to test the clinical value of the model.</p><p><strong>Results: </strong>The final model identified age, length of stay in the NICU, activated partial thromboplastin time (APTT), D-dimer, tracheotomy duration, pulmonary infection, antibiotic use, and dehydrating agents as key predictors. The nomogram demonstrated excellent discrimination (AUC 0.763, 95% CI: 0.714-0.811 in the training dataset; AUC 0.809, 95% CI: 0.732-0.885 in the testing cohort), strong calibration (Hosmer-Lemeshow test: <i>p</i> = 0.126 [training]; <i>p</i> = 0.823 [testing]) and consistent clinical net benefit across prevention thresholds (10%-40% risk probability).</p><p><strong>Conclusions: </strong>The risk prediction model developed in this study can effectively predict VTE occurrence in neurocritical patients with good discrimination and clinical utility, providing a valuable tool for identifying high-risk individuals and performing early prevention and treatment measures.</p>","PeriodicalId":18371,"journal":{"name":"Mediators of Inflammation","volume":"2025 ","pages":"8133560"},"PeriodicalIF":4.2,"publicationDate":"2025-12-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12767376/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145912269","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Mitochondrial Dysfunction and Immune Cell Infiltration in Diabetic Kidney Disease: A Mendelian Randomization and Multiomics Study. 糖尿病肾病的线粒体功能障碍和免疫细胞浸润:孟德尔随机和多组学研究
IF 4.2 3区 医学 Q2 CELL BIOLOGY Pub Date : 2025-12-25 eCollection Date: 2025-01-01 DOI: 10.1155/mi/5592084
Tianyue Zhang, Junxia Wu, Jiazhi Zhang, Yepeng Hu, Yiming Zhao, Guangyun Mao, Jingjing Jiao, Jun Wang, Riqiu Chen, Chao Zheng

Background: Diabetic kidney disease (DKD) is a multifactorial complication of diabetes involving mitochondrial dysfunction and immune cell infiltration. However, the causal relationships remain unclear.

Methods: We applied Mendelian randomization (MR) and single-cell RNA sequencing (scRNA-seq) to investigate the roles of mitochondrial gene expression and immune cells in DKD. Additionally, peripheral blood mononuclear cells (PBMCs) from DKD patients were analyzed for differential gene expression.

Results: Higher expression of mitochondrial genes PCCB, ACADM, ADHFE1, OCIAD1, and FIS1 increased DKD risk, while genes like NT5DC2, ATP5MC3, and GLYCTK decreased risk. Immune traits, including human leukocyte antigen (HLA)-DR + plasmacytoid dendritic cells (pDCs), mediated the effects of mitochondrial dysfunction on DKD. scRNA-seq revealed significant downregulation of ATP5MC3, GLYCTK, and NT5DC2 in podocytes (PODOs) and tubular cells in DKD kidneys, alongside increased infiltration of helper T cells, B cells, dendritic cells (DCs), and plasma cells. PBMC analysis highlighted the upregulation of proinflammatory genes (CXCL2, CXCL3, and others) in DKD patients.

Conclusion: This study highlights the complex interplay between mitochondrial dysfunction and immune cell infiltration in DKD pathogenesis. Key mitochondrial genes and immune traits identified here offer novel therapeutic targets such as ATP5MC3, GLYCTK, and DC pathways.

背景:糖尿病肾病(DKD)是糖尿病的多因素并发症,涉及线粒体功能障碍和免疫细胞浸润。然而,因果关系尚不清楚。方法:采用孟德尔随机化(MR)和单细胞RNA测序(scRNA-seq)技术研究线粒体基因表达和免疫细胞在DKD中的作用。此外,还分析了DKD患者外周血单个核细胞(PBMCs)的差异基因表达。结果:线粒体基因PCCB、ACADM、ADHFE1、OCIAD1、FIS1的高表达增加了DKD风险,而NT5DC2、ATP5MC3、GLYCTK等基因的高表达降低了DKD风险。免疫特性,包括人白细胞抗原(HLA)-DR +浆细胞样树突状细胞(pDCs),介导线粒体功能障碍对DKD的影响。scRNA-seq显示,DKD肾脏足细胞(podo)和小管细胞中ATP5MC3、GLYCTK和NT5DC2显著下调,同时辅助性T细胞、B细胞、树突状细胞(dc)和浆细胞的浸润增加。PBMC分析强调了DKD患者中促炎基因(CXCL2、CXCL3等)的上调。结论:本研究强调了线粒体功能障碍与免疫细胞浸润在DKD发病机制中的复杂相互作用。本文确定的关键线粒体基因和免疫特性提供了新的治疗靶点,如ATP5MC3、GLYCTK和DC途径。
{"title":"Mitochondrial Dysfunction and Immune Cell Infiltration in Diabetic Kidney Disease: A Mendelian Randomization and Multiomics Study.","authors":"Tianyue Zhang, Junxia Wu, Jiazhi Zhang, Yepeng Hu, Yiming Zhao, Guangyun Mao, Jingjing Jiao, Jun Wang, Riqiu Chen, Chao Zheng","doi":"10.1155/mi/5592084","DOIUrl":"10.1155/mi/5592084","url":null,"abstract":"<p><strong>Background: </strong>Diabetic kidney disease (DKD) is a multifactorial complication of diabetes involving mitochondrial dysfunction and immune cell infiltration. However, the causal relationships remain unclear.</p><p><strong>Methods: </strong>We applied Mendelian randomization (MR) and single-cell RNA sequencing (scRNA-seq) to investigate the roles of mitochondrial gene expression and immune cells in DKD. Additionally, peripheral blood mononuclear cells (PBMCs) from DKD patients were analyzed for differential gene expression.</p><p><strong>Results: </strong>Higher expression of mitochondrial genes PCCB, ACADM, ADHFE1, OCIAD1, and FIS1 increased DKD risk, while genes like NT5DC2, ATP5MC3, and GLYCTK decreased risk. Immune traits, including human leukocyte antigen (HLA)-DR + plasmacytoid dendritic cells (pDCs), mediated the effects of mitochondrial dysfunction on DKD. scRNA-seq revealed significant downregulation of ATP5MC3, GLYCTK, and NT5DC2 in podocytes (PODOs) and tubular cells in DKD kidneys, alongside increased infiltration of helper T cells, B cells, dendritic cells (DCs), and plasma cells. PBMC analysis highlighted the upregulation of proinflammatory genes (CXCL2, CXCL3, and others) in DKD patients.</p><p><strong>Conclusion: </strong>This study highlights the complex interplay between mitochondrial dysfunction and immune cell infiltration in DKD pathogenesis. Key mitochondrial genes and immune traits identified here offer novel therapeutic targets such as ATP5MC3, GLYCTK, and DC pathways.</p>","PeriodicalId":18371,"journal":{"name":"Mediators of Inflammation","volume":"2025 ","pages":"5592084"},"PeriodicalIF":4.2,"publicationDate":"2025-12-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12767380/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145912225","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Interplay Between Key Molecular Signaling Pathways and Immune Players Following Brain Irradiation. 脑辐照后关键分子信号通路与免疫因子的相互作用
IF 4.2 3区 医学 Q2 CELL BIOLOGY Pub Date : 2025-12-23 eCollection Date: 2025-01-01 DOI: 10.1155/mi/8833271
Seidu A Richard

Irradiation (IRT) has been used extensively for the diagnosis and treatment of primary as well as metastatic brain tumors. Although the susceptibility of the radiation-induced brain injury or damage (RIBI) is partially associated with the sensitivity of particular cell types, pathways of injury in other types of brain disease or damage implicate the significance of the interaction between cell compartments. IRT-induced double-strand breaks (DSBs) are the utmost detrimental kind of DNA damage, which result in cell death as well as sustainable chromosomal reconfigurations following IRT exposure to the brain. It is worth noting that IRT-induced DSBs, and stimulation of interplay of key signaling pathways such as mitogen-activated protein kinases (MAPK), JAK/STAT, phosphoinositide-3-kinase/protein kinase B/AKT (PI3K-PKB/AKT), protein 53 (p53), mammalian target of rapamycin (mTOR), NF-kB, transforming growth factor beta (TGF-β), tumor necrosis factor (TNF), as well as reactive oxygen species (ROS) to either trigger radiosensitization or radioresistance as well as RIBI mechanisms. Also, IRT is capable of influencing fundamental immune players like cluster of differentiation markers, the complement cascade, T cells, B cells, interleukins, as well as chemotactic cytokines. Thus, the aim of this review is to explicate the key molecular signaling and immune mechanisms associated with IRT-induced neurological deficits following brain IRT.

放射治疗(IRT)已广泛用于原发性和转移性脑肿瘤的诊断和治疗。尽管辐射引起的脑损伤或损伤(RIBI)的易感性部分与特定细胞类型的敏感性相关,但其他类型脑疾病或损伤的损伤途径暗示了细胞间相互作用的重要性。IRT诱导的双链断裂(DSBs)是最有害的DNA损伤类型,在IRT暴露于大脑后导致细胞死亡以及持续的染色体重构。值得注意的是,irt诱导DSBs,并刺激关键信号通路的相互作用,如丝裂原活化蛋白激酶(MAPK)、JAK/STAT、磷酸肌醇-3-激酶/蛋白激酶B/AKT (PI3K-PKB/AKT)、蛋白53 (p53)、哺乳动物雷帕霉素靶点(mTOR)、NF-kB、转化生长因子β (TGF-β)、肿瘤坏死因子(TNF)、活性氧(ROS),从而触发放射增敏或放射耐药,以及RIBI机制。此外,IRT能够影响基本的免疫参与者,如分化标记簇、补体级联、T细胞、B细胞、白细胞介素以及趋化细胞因子。因此,本综述的目的是阐明与脑IRT诱导的神经功能缺损相关的关键分子信号和免疫机制。
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引用次数: 0
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Mediators of Inflammation
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