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Using artificial intelligence and promoter-level transcriptome analysis to identify a biomarker as a possible prognostic predictor of cardiac complications in male patients with Fabry disease 利用人工智能和启动子级转录组分析确定一种生物标记物,作为法布里病男性患者心脏并发症的可能预后预测因子
IF 1.8 4区 医学 Q3 GENETICS & HEREDITY Pub Date : 2024-10-13 DOI: 10.1016/j.ymgmr.2024.101152
Hiroshi Kobayashi , Norio Nakata , Sayoko Izuka , Kenichi Hongo , Masako Nishikawa
Fabry disease is the most frequently occurring form of lysosomal disease in Japan, and is characterized by a wide variety of conditions. Primarily, the three major types of concerns associated with Fabry disease observed during adulthood that must be prevented are central nervous system, renal, and cardiac complications. Cardiac complications, such as cardiomyopathy, cardiac muscle fibrosis, and severe arrhythmia, are the most common mortality causes in patients with Fabry disease. To predict cardiac complications of Fabry disease, we extracted RNA from the venous blood of patients for cap analysis of gene expression (CAGE), performed likelihood ratio tests for each RNA expression dataset obtained from individuals with and without cardiac complications, and analyzed the correlation between cardiac functional factors observed using magnetic resonance imaging data extracted using artificial intelligence algorithms and RNA expression. Our findings showed that CHN1 expression was significantly higher in male Fabry disease patients with cardiac complications and that it could be associated with many cardiac functional factors. CHN1 encodes a GTPase-activating protein, chimerin 1, which is specific to the GTP-binding protein Rac (involved in oxidative stress generation and the promotion of myocardial fibrosis). Thus, CHN1 is a potential predictive biomarker of cardiac complications in Fabry disease; however, further studies are required to confirm this observation.
法布里病是日本最常见的溶酶体疾病,表现为多种病症。法布里病在成年期主要有三种必须预防的并发症,即中枢神经系统并发症、肾脏并发症和心脏并发症。心脏并发症,如心肌病、心肌纤维化和严重心律失常,是法布里病患者最常见的死亡原因。为了预测法布里病的心脏并发症,我们提取了患者静脉血中的 RNA 进行基因表达上限分析(CAGE),对从有心脏并发症和无心脏并发症的个体中获得的每个 RNA 表达数据集进行似然比检验,并分析了利用人工智能算法提取的磁共振成像数据观察到的心脏功能因素与 RNA 表达之间的相关性。我们的研究结果表明,在有心脏并发症的男性法布里病患者中,CHN1的表达量明显较高,而且它可能与许多心脏功能因素有关。CHN1 编码一种 GTP 酶激活蛋白--嵌合蛋白 1,它对 GTP 结合蛋白 Rac(参与氧化应激的产生和心肌纤维化的促进)具有特异性。因此,CHN1 是法布里病心脏并发症的潜在预测性生物标志物;然而,要证实这一观察结果还需要进一步的研究。
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引用次数: 0
Patient voices on PKU care: Insights from focus groups with current and former patients 患者对 PKU 护理的看法:与现任和前任患者进行的焦点小组讨论的启示
IF 1.8 4区 医学 Q3 GENETICS & HEREDITY Pub Date : 2024-10-09 DOI: 10.1016/j.ymgmr.2024.101148
Emily Zhu , Suzanne Hollander , Stephanie Sacharow
Many adults with phenylketonuria (PKU) were discharged from clinics before lifelong treatment guidelines and new therapies. As part of the PKU lost to clinical care study, moderated focus groups were conducted to understand why individuals become lost to care and how to maintain patient engagement. Focus groups involved active clinic patients and those lost to PKU care. Discussions revealed desire for enhanced communication, improved support and access, and community connections.
许多患有苯丙酮尿症(PKU)的成年人在终身治疗指南和新疗法出台之前就已经离开了诊所。作为 "PKU 失访者临床护理研究 "的一部分,我们开展了有节制的焦点小组活动,以了解患者失访的原因以及如何保持患者的参与度。参与焦点小组的有活跃的门诊患者和失去北京大学治疗机会的患者。讨论表明,患者希望加强沟通、获得更好的支持和服务,并与社区建立联系。
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引用次数: 0
Comparative pharmacokinetics and pharmacodynamics of two formulations of agalsidase beta (agalsidase Biosidus) and Fabrazyme® by intravenous infusion in healthy male volunteers 健康男性志愿者静脉注射两种配方的阿加西酶 beta(阿加西酶 Biosidus)和 Fabrazyme® 的药代动力学和药效学比较
IF 1.8 4区 医学 Q3 GENETICS & HEREDITY Pub Date : 2024-10-07 DOI: 10.1016/j.ymgmr.2024.101149
Viridiana Berstein , Eduardo M. Pirotzky , Hernán D. Taconelli , M. Gabriela Gobbi , Lara Beider , Natali D. Salgueiro , Laila Dome , Roberto A. Diez , Hugo Sotelo , Sabrina Coppola
Fabry disease is a rare X-linked lysosomal condition that leads to the accumulation of glycosphingolipids in various tissues, causing cellular dysfunction, tissue remodeling, progressive fibrosis, and organ failure. The disease results from a deficiency in the human α-galactosidase A enzyme, responsible for breaking down glycosphingolipids like globotriaosylceramide (GL-3 or Gb3) into galactose and dihexose ceramides. In individuals diagnosed with Fabry disease, treatment from 2 years of age onwards typically involves agalsidase beta, the normal recombinant form of the defective enzyme. Agalsidase beta from Biosidus has been developed as a biosimilar to Sanofi-Genzyme's Fabrazyme®. In the molecule's clinical journey, a phase I trial was designed to establish its similarity in terms of pharmacokinetics, pharmacodynamics, and immunogenicity compared to the reference medication. The study was conducted on 24 healthy male volunteers, aged between 18 and 40 years. All volunteers received a single 1 mg/kg bw dose of Fabrazyme® or Biosidus Agalsidase beta by continuous intravenous (IV) infusion over 5 h. The 90 % confidence interval (CI) of the maximum concentration (Cmax), area under the plasma concentration-time curve from time 0 to 12 h (AUC0-12 h) and area under the plasma concentration-time curve extrapolated from time 0 to infinity (AUC0-∞) ratios fell within the accepted range of 80–125 %. No differences were detected in adverse effects or antibody induction. This indicates that Biosidus agalsidase beta meets the criteria for being considered similar to the reference formulation Sanofi Genzyme's Fabrazyme®.
法布里病是一种罕见的 X 连锁溶酶体疾病,会导致糖磷脂在各种组织中积聚,引起细胞功能障碍、组织重塑、进行性纤维化和器官衰竭。这种疾病是由于人类α-半乳糖苷酶A酶缺乏所致,该酶负责将糖磷脂(如球形糖基甘油酰胺(GL-3 或 Gb3))分解为半乳糖和二己糖神经酰胺。对于确诊为法布里病的患者,从 2 岁开始的治疗通常采用阿加尔斯酶 beta,即缺陷酶的正常重组形式。Biosidus 公司的阿加西酶 beta 已被开发为赛诺菲-酵素公司 Fabrazyme® 的生物仿制药。在该分子的临床试验过程中,设计了一项 I 期试验,以确定其在药代动力学、药效学和免疫原性方面与参照药物的相似性。研究对象是 24 名健康男性志愿者,年龄在 18 岁至 40 岁之间。最大浓度(Cmax)、0至12小时血浆浓度-时间曲线下面积(AUC0-12 h)和0至无穷大血浆浓度-时间曲线下面积(AUC0-∞)比值的90%置信区间(CI)在80-125%的公认范围内。在不良反应或抗体诱导方面未发现差异。这表明Biosidus公司的β-阿加西酶符合与赛诺菲健赞公司的Fabrazyme®参比制剂相似的标准。
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引用次数: 0
Review and metabolomic profiling of unsolved case reveals newly reported autosomal dominant congenital disorder of glycosylation, type Iw formerly thought to only be an autosomal recessive condition 对未决病例进行回顾和代谢组学分析,发现新报道的常染色体显性先天性糖基化紊乱 Iw 型以前被认为只是一种常染色体隐性遗传病
IF 1.8 4区 医学 Q3 GENETICS & HEREDITY Pub Date : 2024-10-05 DOI: 10.1016/j.ymgmr.2024.101145
Kimberly M. Ezell , Yutaka Furuta , Devin Oglesbee , Eniko K. Pivnick , David Rinker , Jonathan H. Sheehan , Rory J. Tinker , Rizwan Hamid , Joy D. Cogan , Lynette Rives , Serena Neumann , Brian Corner , Mary Koziura , John A. Phillips III , the Undiagnosed Diseases Network
Autosomal dominant congenital disorder of glycosylation (CDG) type Iw (OMIM# 619714) is caused by a heterozygous mutation in the STT3A gene. Most CDGs have an autosomal recessive (AR) mode of inheritance, but several cases with an autosomal dominant (AD) form of an AR CDG have been recently identified. This report describes a 17-year-old male who was referred to the Undiagnosed Diseases Network (UDN) with a history of macrocephaly, failure to thrive, short stature, epilepsy, autism, attention-deficit/hyperactivity disorder, mild developmental delay, intermittent hypotonia, dysmorphic features, and mildly enlarged aortic root. Trio exome sequencing was negative. His biochemical workup included normal plasma amino acids, ammonia, acylcarnitine profile and urine organic and amino acids. His UDN genome sequencing (GS) identified a previously unreported de novo STT3A variant (c.1631A > G: p.Asn544Ser). This variant removes a glycosylation site and was predicted to be destabilizing by structural biology modeling. The patient was formally diagnosed by the UDN Metabolomics Core as having an abnormal transferrin profile indicative of CDG type Iw through metabolomic profiling. We report here an affected male with phenotypic, molecular, and metabolic findings consistent with CDG type Iw due to a heterozygous STT3A variant. This case highlights the importance of further testing of individuals with the phenotypic and metabolic findings of an AR disorder who are heterozygous for a single disease-causing allele and can be shown to have a new AD form of the disorder that represents clinical heterogeneity.
常染色体显性先天性糖基化紊乱(CDG)Iw 型(OMIM# 619714)是由 STT3A 基因的杂合突变引起的。大多数 CDG 都是常染色体隐性遗传(AR),但最近发现了几例常染色体显性遗传(AD)的 AR 型 CDG。本报告描述了一名 17 岁的男性,他因巨脑症、发育不良、身材矮小、癫痫、自闭症、注意力缺陷/多动症、轻度发育迟缓、间歇性肌张力低下、畸形特征和轻度主动脉根部肥大而被转诊至未确诊疾病网络(UDN)。三组外显子测序结果为阴性。他的生化检查包括血浆氨基酸、氨、酰基肉碱谱以及尿液有机酸和氨基酸正常。他的 UDN 基因组测序(GS)发现了一个以前未报道过的 STT3A 新变体(c.1631A > G: p.Asn544Ser)。该变异去除了一个糖基化位点,根据结构生物学建模预测,该变异会破坏其稳定性。通过代谢组学分析,UDN 代谢组学核心(UDN Metabolomics Core)正式确诊该患者转铁蛋白谱异常,显示为 CDG Iw 型。我们在此报告了一名受影响的男性患者,其表型、分子和代谢结果均符合因杂合 STT3A 变异而导致的 CDG Iw 型。该病例强调了进一步检测具有单致病等位基因杂合子的AR紊乱表型和代谢结果的个体的重要性,这些个体可被证明具有代表临床异质性的新的AD紊乱形式。
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引用次数: 0
Recurrent rhabdomyolysis caused by palmitoyltransferase II (CPT-2) deficiency but complete normal acylcarnitine profile: A patient presentation and review of the literature 棕榈酰基转移酶 II (CPT-2) 缺乏症引起的复发性横纹肌溶解症,但酰基肉碱谱完全正常:患者病例和文献综述
IF 1.8 4区 医学 Q3 GENETICS & HEREDITY Pub Date : 2024-10-05 DOI: 10.1016/j.ymgmr.2024.101151
Chih-Hsuan Lu , Chia-Feng Yang , Yun-Ru Chen , Yann-Jang Chen , Yung-Hsiu Lu , Dau-Ming Niu
Recurrent rhabdomyolysis, marked by skeletal muscle breakdown, can stem from various causes, including genetic disorders. We detail a patient of a 22-year-old male with carnitine palmitoyltransferase II (CPT-2) deficiency manifesting recurrent rhabdomyolysis despite normal acylcarnitine profiles. Whole-genome sequencing identified two CPT2 gene variants: c.338C > T and c.482G > A, confirming the diagnosis. We conducted a case report and a comprehensive literature review encompassing 262 articles related to CPT-2 deficiency available on PubMed. The review detailed 245 cases across various forms, including lethal neonatal, severe infantile hepatocardiomuscular, and myopathic forms. The study highlighted the variability and complexity of CPT-2 deficiency phenotypes, emphasizing correlations between variants and phenotypes as well as gender distribution. Although the CPT-2 deficiency genotype does not entirely predict phenotype severity, it remains informative for most patients, assisting in assessing the severity linked to each genetic variant. The results of our study offer crucial insights into evaluating the severity associated with individual genetic variants. Notably, our patient displayed normal acylcarnitine profiles between illness episodes, indicating possible profile abnormalities only during active disease states.
We propose the collection of additional blood samples for acylcarnitine analysis during episodes of rhabdomyolysis without delay in all patients presenting with rhabdomyolysis of unknown cause as a crucial diagnostic strategy. This approach may unveil unexpected underlying diseases, enabling early and accurate diagnoses.
以骨骼肌分解为特征的复发性横纹肌溶解症可由多种原因引起,包括遗传性疾病。我们详细介绍了一名患有肉碱棕榈酰基转移酶 II(CPT-2)缺乏症的 22 岁男性患者,尽管其酰基肉碱含量正常,但仍表现为复发性横纹肌溶解症。全基因组测序发现了两个 CPT2 基因变异:c.338C > T 和 c.482G > A,从而确诊了该病。我们对病例进行了报告,并对 PubMed 上与 CPT-2 缺乏症相关的 262 篇文章进行了全面的文献综述。综述中详细介绍了 245 例不同形式的病例,包括致死性新生儿型、严重婴儿肝心肌型和肌病型。该研究强调了 CPT-2 缺乏症表型的多变性和复杂性,强调了变异和表型之间的相关性以及性别分布。虽然 CPT-2 缺乏症的基因型并不能完全预测表型的严重程度,但它对大多数患者仍有参考价值,有助于评估与每个基因变异相关的严重程度。我们的研究结果为评估与单个基因变异相关的严重程度提供了重要的见解。值得注意的是,我们的患者在两次疾病发作之间显示出正常的酰基肉碱谱,这表明只有在疾病活跃期才可能出现谱异常。我们建议,作为一项重要的诊断策略,在所有不明原因横纹肌溶解症患者的横纹肌溶解症发作期间,立即采集额外的血液样本进行酰基肉碱分析。这种方法可能会揭示出意想不到的潜在疾病,从而实现早期准确诊断。
{"title":"Recurrent rhabdomyolysis caused by palmitoyltransferase II (CPT-2) deficiency but complete normal acylcarnitine profile: A patient presentation and review of the literature","authors":"Chih-Hsuan Lu ,&nbsp;Chia-Feng Yang ,&nbsp;Yun-Ru Chen ,&nbsp;Yann-Jang Chen ,&nbsp;Yung-Hsiu Lu ,&nbsp;Dau-Ming Niu","doi":"10.1016/j.ymgmr.2024.101151","DOIUrl":"10.1016/j.ymgmr.2024.101151","url":null,"abstract":"<div><div>Recurrent rhabdomyolysis, marked by skeletal muscle breakdown, can stem from various causes, including genetic disorders. We detail a patient of a 22-year-old male with carnitine palmitoyltransferase II (CPT-2) deficiency manifesting recurrent rhabdomyolysis despite normal acylcarnitine profiles. Whole-genome sequencing identified two <em>CPT2</em> gene variants: c.338C &gt; T and c.482G &gt; A, confirming the diagnosis. We conducted a case report and a comprehensive literature review encompassing 262 articles related to CPT-2 deficiency available on PubMed. The review detailed 245 cases across various forms, including lethal neonatal, severe infantile hepatocardiomuscular, and myopathic forms. The study highlighted the variability and complexity of CPT-2 deficiency phenotypes, emphasizing correlations between variants and phenotypes as well as gender distribution. Although the CPT-2 deficiency genotype does not entirely predict phenotype severity, it remains informative for most patients, assisting in assessing the severity linked to each genetic variant. The results of our study offer crucial insights into evaluating the severity associated with individual genetic variants. Notably, our patient displayed normal acylcarnitine profiles between illness episodes, indicating possible profile abnormalities only during active disease states.</div><div>We propose the collection of additional blood samples for acylcarnitine analysis during episodes of rhabdomyolysis without delay in all patients presenting with rhabdomyolysis of unknown cause as a crucial diagnostic strategy. This approach may unveil unexpected underlying diseases, enabling early and accurate diagnoses.</div></div>","PeriodicalId":18814,"journal":{"name":"Molecular Genetics and Metabolism Reports","volume":"41 ","pages":"Article 101151"},"PeriodicalIF":1.8,"publicationDate":"2024-10-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142421595","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Compensation for metabolic dietitians practicing in the United States: 2023 genetic metabolic dietitians international professional status survey 在美国执业的代谢营养师的报酬:2023 年遗传代谢营养师国际职业状况调查
IF 1.8 4区 医学 Q3 GENETICS & HEREDITY Pub Date : 2024-09-29 DOI: 10.1016/j.ymgmr.2024.101147
Krista Viau , Sommer Gaughan , Jessica Kopesky , Beth Ogata , Heather Saavedra , Mary Sowa , Erin MacLeod

Background

Genetic Metabolic Dietitians International (GMDI) conducted a professional status survey of metabolic dietitians working in the United States to describe job satisfaction and establish salary and compensation benchmarks specific to metabolic dietitians.

Methods

The survey was anonymously administered in a web-based format via REDCap between October and November 2023. Registered dietitians working with inborn errors of metabolism (IEM) were eligible to participate.

Results

A total of 178 surveys were received and 147 were included in the final analysis. Most respondents were female (96 %), worked in a clinical setting (83 %), and held a graduate degree (75 %), while 30 % had one or more board certifications and 8 % were faculty. Respondents specialized in genetic metabolic nutrition for a median of 6 years (IQR 2–15). Overall satisfaction with one's professional focus in IEM was high among respondents (87 %), though 40 % reported dissatisfaction with earnings potential in their current position.
The median annual, full-time salary for US-based metabolic dietitians in all work settings was $80,400 (IQR $67,100-96,000). After excluding dietitians working in the pharmaceutical and/or nutrition industry (n = 14), the median annual salary decreased to $76,200 (IQR $66,700-91,000). Increased years' experience, responsibility (e.g., supervisor), expertise (i.e., board certification), and categorization as a Level II dietitian or higher were associated with higher annual salary.

Conclusion

The results of the 2023 GMDI Professional Status Survey provide insight into the current compensation and benefits of metabolic dietitians practicing in the US. These data can be used to support individual efforts to secure equitable compensation for the metabolic dietitian's critical role in the medical nutrition therapy for individuals with IEM.
背景国际遗传代谢营养师协会(Genetic Metabolic Dietitians International,GMDI)对在美国工作的代谢营养师进行了一次职业状况调查,以了解他们的工作满意度,并制定代谢营养师的薪酬和补偿基准。结果共收到 178 份调查问卷,其中 147 份被纳入最终分析。大多数受访者为女性(96%),在临床环境中工作(83%),拥有研究生学位(75%),30%的受访者拥有一个或多个委员会认证,8%的受访者是教师。受访者从事遗传代谢营养专业的时间中位数为 6 年(IQR 2-15)。受访者对自己专注于遗传代谢营养专业的总体满意度较高(87%),但有 40% 的受访者表示对目前职位的收入潜力不满意。在美国,所有工作环境中的代谢营养师的全职年薪中位数为 80,400 美元(IQR 为 67,100-96,000 美元)。排除在制药和/或营养行业工作的营养师(n = 14)后,年薪中位数降至 76200 美元(IQR 为 66700-91000 美元)。工作年限、责任(如主管)、专业知识(如委员会认证)和二级或二级以上营养师类别的增加与年薪的提高有关。这些数据可用于支持个人努力,为代谢营养师在 IEM 患者的医学营养治疗中发挥的关键作用争取公平报酬。
{"title":"Compensation for metabolic dietitians practicing in the United States: 2023 genetic metabolic dietitians international professional status survey","authors":"Krista Viau ,&nbsp;Sommer Gaughan ,&nbsp;Jessica Kopesky ,&nbsp;Beth Ogata ,&nbsp;Heather Saavedra ,&nbsp;Mary Sowa ,&nbsp;Erin MacLeod","doi":"10.1016/j.ymgmr.2024.101147","DOIUrl":"10.1016/j.ymgmr.2024.101147","url":null,"abstract":"<div><h3>Background</h3><div>Genetic Metabolic Dietitians International (GMDI) conducted a professional status survey of metabolic dietitians working in the United States to describe job satisfaction and establish salary and compensation benchmarks specific to metabolic dietitians.</div></div><div><h3>Methods</h3><div>The survey was anonymously administered in a web-based format via REDCap between October and November 2023. Registered dietitians working with inborn errors of metabolism (IEM) were eligible to participate.</div></div><div><h3>Results</h3><div>A total of 178 surveys were received and 147 were included in the final analysis. Most respondents were female (96 %), worked in a clinical setting (83 %), and held a graduate degree (75 %), while 30 % had one or more board certifications and 8 % were faculty. Respondents specialized in genetic metabolic nutrition for a median of 6 years (IQR 2–15). Overall satisfaction with one's professional focus in IEM was high among respondents (87 %), though 40 % reported dissatisfaction with earnings potential in their current position.</div><div>The median annual, full-time salary for US-based metabolic dietitians in all work settings was $80,400 (IQR $67,100-96,000). After excluding dietitians working in the pharmaceutical and/or nutrition industry (<em>n</em> = 14), the median annual salary decreased to $76,200 (IQR $66,700-91,000). Increased years' experience, responsibility (e.g., supervisor), expertise (i.e., board certification), and categorization as a Level II dietitian or higher were associated with higher annual salary.</div></div><div><h3>Conclusion</h3><div>The results of the 2023 GMDI Professional Status Survey provide insight into the current compensation and benefits of metabolic dietitians practicing in the US. These data can be used to support individual efforts to secure equitable compensation for the metabolic dietitian's critical role in the medical nutrition therapy for individuals with IEM.</div></div>","PeriodicalId":18814,"journal":{"name":"Molecular Genetics and Metabolism Reports","volume":"41 ","pages":"Article 101147"},"PeriodicalIF":1.8,"publicationDate":"2024-09-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142357434","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Unexplained splenomegaly as a diagnostic marker for a rare but severe disease with an innovative and highly effective new treatment option: A case report 不明原因的脾脏肿大是一种罕见但严重疾病的诊断标志,可采用创新、高效的新治疗方案:病例报告
IF 1.8 4区 医学 Q3 GENETICS & HEREDITY Pub Date : 2024-09-28 DOI: 10.1016/j.ymgmr.2024.101144
Amber Van Baelen , Stijn Verhulst , François Eyskens
Acid Sphingomyelinase Deficiency (ASMD) is a lysosomal storage disorder that can lead to severe complications if not promptly treated. This case aims to highlight the critical importance of early awareness of ASMD and to introduce, for the first time in the literature, a new and highly effective treatment option for children.
酸性鞘磷脂酶缺乏症(ASMD)是一种溶酶体贮积症,如不及时治疗可导致严重并发症。本病例旨在强调及早了解 ASMD 的重要性,并首次在文献中介绍一种针对儿童的新型高效治疗方案。
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引用次数: 0
OTC gene duplication as the possible cause of massive hyperammonaemia with a fatal prognosis OTC基因重复可能导致预后致命的大量高氨血症
IF 1.8 4区 医学 Q3 GENETICS & HEREDITY Pub Date : 2024-09-28 DOI: 10.1016/j.ymgmr.2024.101146
Borkowska Natalia , Kaluzny Lukasz , Rokicki Dariusz , Szmida Elzbieta , Kowalski Pawel , Dus-Zuchowska Monika , Skiba Pawel , Ciara Elzbieta , Biela Mateusz , Rydzanicz Malgorzata , Ploski Rafal , Smigiel Robert
Ornithine transcarbamylase (OTC) deficiency is the most common urea cycle disorder. It may occur due to various changes to the OTC gene located on the X chromosome. Many sequence variants in the OTC gene result in different severity and require different types of molecular testing. We present a familial case of hyperammonemia possibly caused by the small CNV (duplication) within exon 2 of the OTC gene that was not detected by standard sequencing methods. In this case, the knowledge of the underlying molecular changes to the gene results in an appropriate approach to future sibling screening. Collecting more data, especially regarding rare variants of genetic disorders, is essential as it will help to create the best diagnostic-therapeutic path in prenatal and neonatal care in the future. Early diagnosis and treatment can lead to a better prognosis, and this case emphasizes the importance of understanding genetic changes in OTC deficiency.
鸟氨酸转氨酶(OTC)缺乏症是最常见的尿素循环障碍。它可能是由于位于 X 染色体上的 OTC 基因发生了各种变化而导致的。OTC 基因的许多序列变异会导致不同的严重程度,因此需要进行不同类型的分子检测。我们介绍了一例家族性高锰酸钾血症病例,该病例可能是由 OTC 基因第 2 外显子内的小 CNV(重复)引起的,但标准测序方法并未检测到该 CNV。在这个病例中,通过了解基因的潜在分子变化,为今后的同胞筛查提供了适当的方法。收集更多数据,尤其是有关遗传疾病罕见变异的数据至关重要,因为这将有助于在未来的产前和新生儿护理中开辟最佳的诊断-治疗途径。早期诊断和治疗可以改善预后,本病例强调了了解 OTC 缺乏症基因变化的重要性。
{"title":"OTC gene duplication as the possible cause of massive hyperammonaemia with a fatal prognosis","authors":"Borkowska Natalia ,&nbsp;Kaluzny Lukasz ,&nbsp;Rokicki Dariusz ,&nbsp;Szmida Elzbieta ,&nbsp;Kowalski Pawel ,&nbsp;Dus-Zuchowska Monika ,&nbsp;Skiba Pawel ,&nbsp;Ciara Elzbieta ,&nbsp;Biela Mateusz ,&nbsp;Rydzanicz Malgorzata ,&nbsp;Ploski Rafal ,&nbsp;Smigiel Robert","doi":"10.1016/j.ymgmr.2024.101146","DOIUrl":"10.1016/j.ymgmr.2024.101146","url":null,"abstract":"<div><div>Ornithine transcarbamylase (OTC) deficiency is the most common urea cycle disorder. It may occur due to various changes to the <em>OTC</em> gene located on the X chromosome. Many sequence variants in the <em>OTC</em> gene result in different severity and require different types of molecular testing. We present a familial case of hyperammonemia possibly caused by the small CNV (duplication) within exon 2 of the <em>OTC</em> gene that was not detected by standard sequencing methods. In this case, the knowledge of the underlying molecular changes to the gene results in an appropriate approach to future sibling screening. Collecting more data, especially regarding rare variants of genetic disorders, is essential as it will help to create the best diagnostic-therapeutic path in prenatal and neonatal care in the future. Early diagnosis and treatment can lead to a better prognosis, and this case emphasizes the importance of understanding genetic changes in OTC deficiency.</div></div>","PeriodicalId":18814,"journal":{"name":"Molecular Genetics and Metabolism Reports","volume":"41 ","pages":"Article 101146"},"PeriodicalIF":1.8,"publicationDate":"2024-09-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142357435","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A rare case of fructose-1, 6-bisphosphatase deficiency: Clinical features in a pediatric patient 一例罕见的果糖-1,6-二磷酸酶缺乏症:一名儿童患者的临床特征
IF 1.8 4区 医学 Q3 GENETICS & HEREDITY Pub Date : 2024-09-25 DOI: 10.1016/j.ymgmr.2024.101143
Shami Pokhrel, Subha Sainju, Prasanna Lamsal, Uma Devi Chhetri
Fructose-1, 6- bisphosphatase deficiency is a rare autosomal recessive inborn error of fructose metabolism which mainly affects gluconeogenesis. It often presents with ketotic hypoglycemia and lactic acidosis, with hyperventilation. The disease has a high mortality rate when undiagnosed.
Here we report a case of this rare disorder, referred to our hospital in Western Nepal, diagnosed originally as pneumonia. The patient presented in respiratory distress with severe metabolic acidosis and dehydration. She also demonstrated hypoglycemia, hypernatremia, coagulation dysfunction and albuminuria, all of which gradually improved, though her lactate remained consistently elevated. This led to investigation of urinary ketones which were positive suggesting a defect in the metabolism of carbohydrates. Urine organic acid profile and whole exome sequencing finally confirmed the diagnosis of Fructose-1, 6- bisphosphatase deficiency. To our knowledge this is the first case report of this disease diagnosed in Nepal.
果糖-1,6-二磷酸酶缺乏症是一种罕见的常染色体隐性遗传果糖代谢先天性错误,主要影响葡萄糖的生成。该病通常表现为酮症性低血糖和乳酸性酸中毒,并伴有过度换气。我们在此报告一例尼泊尔西部医院转来的罕见病例,最初诊断为肺炎。患者呼吸窘迫,伴有严重的代谢性酸中毒和脱水。她还表现出低血糖、高钠血症、凝血功能障碍和白蛋白尿,所有这些症状都逐渐好转,但乳酸仍持续升高。因此,她接受了尿酮检查,结果呈阳性,这表明她的碳水化合物代谢存在缺陷。尿液有机酸图谱和全外显子组测序最终确诊为果糖-1,6-双磷酸酶缺乏症。据我们所知,这是在尼泊尔诊断出的第一例这种疾病的病例报告。
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引用次数: 0
MADD-like pattern of acylcarnitines associated with sertraline use 与使用舍曲林有关的酰基肉碱 MADD 样式
IF 1.8 4区 医学 Q3 GENETICS & HEREDITY Pub Date : 2024-09-16 DOI: 10.1016/j.ymgmr.2024.101142
Filippo Ingoglia , Mohsen Tanfous , Benjamin Ellezam , Katherine J. Anderson , Marzia Pasquali , Lorenzo D. Botto

Multiple acyl-CoA dehydrogenase deficiency (MADD) is a primary mitochondrial dysfunction affecting mitochondrial fatty acid and protein metabolism, caused by biallelic pathogenic variants in ETFA, ETFB, or ETFDH genes. The heterogeneous phenotypes associated with MADD have been classified into three groups: neonatal onset with congenital anomalies (type 1), neonatal onset without congenital anomalies (type 2), and attenuated and/or later onset (type 3). Here, we present two cases with biochemical profiles mimicking late-onset MADD but negative genetic testing, associated with the use of sertraline, a commonly used antidepressant. Case 1 is a 22 yo woman diagnosed with depression and profound fatigue who was referred to the metabolic clinic because of carnitine deficiency and a plasma acylcarnitine profile with a MADD-like pattern. Case 2 is a 61 yo woman with a history of chronic fatigue who was admitted to the emergency department with difficulty swallowing, metabolic acidosis, and mild rhabdomyolysis. Plasma acylcarnitine profile showed a MADD-like pattern. The muscle biopsy revealed lipid droplet accumulation and proliferation of mitochondria with abnormal osmiophilic inclusions, and a biochemical assay of the respiratory chain showed a deficit in complex II activity. In both cases, urine organic acid profile was normal, and genetic tests did not detect variants in the genes involved in MADD. Sertraline was on their list of medications and considering its association with inhibition of mitochondrial function and rhabdomyolysis, the team recommended the discontinuation under medical supervision. In Case 1 after discontinuation, the plasma acylcarnitine test normalized, only to return abnormal when the patient resumed sertraline. In Case 2, after sertraline was discontinued rhabdomyolysis resolved, and the muscle biopsy and biochemical assay of the respiratory chain normalized. Although sertraline is considered a safe drug, these two cases suggest that the use of sertraline may be associated with a potentially reversible form of mitochondrial dysfunction mimicking MADD. Further studies are needed to confirm and estimate the risk of MADD-like presentations with the use of sertraline, as well as identifying additional contributing factors, including genetic factors. Metabolic physicians should consider sertraline use in the differential diagnosis of MADD, particularly when genetic testing is negative.

多酰基-CoA 脱氢酶缺乏症(MADD)是一种影响线粒体脂肪酸和蛋白质代谢的原发性线粒体功能障碍,由 ETFA、ETFB 或 ETFDH 基因的双倍致病变异引起。与 MADD 相关的异质性表型被分为三类:新生儿期发病伴先天性异常(1 型)、新生儿期发病无先天性异常(2 型)以及病情减轻和/或晚期发病(3 型)。在此,我们介绍两例生化特征类似晚发性 MADD 但基因检测呈阴性的病例,这两例病例与使用常用抗抑郁药舍曲林有关。病例 1 是一名 22 岁的女性,被诊断为抑郁症和极度疲劳,因肉碱缺乏和血浆酰基肉碱图谱与 MADD 相似而被转诊至代谢门诊。病例 2 是一名 61 岁的女性,有慢性疲劳史,因吞咽困难、代谢性酸中毒和轻度横纹肌溶解症被送入急诊科。血浆酰肉碱谱显示出类似 MADD 的模式。肌肉活检发现脂滴积聚、线粒体增生并伴有异常嗜渗包涵体,呼吸链生化检测显示复合体II活性不足。在这两个病例中,尿液有机酸谱正常,基因检测也没有发现与 MADD 有关的基因变异。考虑到舍曲林与抑制线粒体功能和横纹肌溶解症有关,研究小组建议在医生指导下停用舍曲林。在病例 1 中,停药后血浆酰肉碱检测结果趋于正常,但当患者重新服用舍曲林后,检测结果又恢复了异常。在病例 2 中,停用舍曲林后横纹肌溶解症缓解,肌肉活检和呼吸链生化检测正常。尽管舍曲林被认为是一种安全的药物,但这两例病例表明,使用舍曲林可能会导致一种潜在的可逆性线粒体功能障碍,类似于 MADD。还需要进一步的研究来确认和估计使用舍曲林后出现类似 MADD 症状的风险,并确定其他诱因,包括遗传因素。代谢科医生在鉴别诊断 MADD 时应考虑使用舍曲林,尤其是在基因检测呈阴性的情况下。
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Molecular Genetics and Metabolism Reports
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