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Two New Species of the Family Acarosporaceae from South Korea. 标题韩国粉孢科二新种
IF 1.9 4区 生物学 Q3 Medicine Pub Date : 2023-09-07 eCollection Date: 2023-01-01 DOI: 10.1080/12298093.2023.2249693
Jung Shin Park, Young-Nam Kwag, Sang-Kuk Han, Soon-Ok Oh

Acarosporaceae is a crustose lichen and is known as a species that has more than 50 multi-spores, and has hyaline spores. Those taxa are often found in rock and soil in mountain areas or coastal regions in Korea, and very diverse forms and species are known. However, after an overall genetic phylogenetic analysis of carbonized ascomata in 2015, species consisting only of the morphological base are newly divided, and several species of Acarosporaceae in Korea are also being discovered in this situation. As a result of analysis using internal transcribed spacer (ITS) and nuLSU gene analysis, Korean species belonged to Acarospora and Sarcogyne clade, and Acarospora classified as the Acarospora clade was mixed with the Polysporina group and the Sarcogyne clade is mixed with the Acarospora. We identified two new species (Acarospora beangnokdamensis J. S. Park & S. O. Oh, sp. nov., Sarcogyne jejuensis J. S. Park & S. O. Oh, sp. nov.) through morphological, molecular, and secondary metabolite substance and found one new record (Sarcogyne oceanica K. Knudsen & Kocourk). We have made a classification key for Acarospora and Sarcogyne in Korea and reported all information together here.

摘要Acarosporaceae是一种硬壳苔藓,是一个拥有50多个多孢子和透明孢子的物种。这些分类群经常在韩国山区或沿海地区的岩石和土壤中发现,并且已知非常多样的形式和物种。然而,在2015年对碳化子囊菌进行全面的遗传系统发育分析后,仅由形态基础组成的物种被新划分,韩国的几个Acarosporaceae物种也在这种情况下被发现。使用内部转录间隔区(ITS)和nuLSU基因分析的结果是,韩国物种属于Acarospora和Sarcogyne分支,并且分类为Acarospor分支的Acarosporia与多孔菌群混合,Sarcogye分支与Acarospora。我们通过形态、分子和次生代谢产物鉴定了两个新种(Acarospora beagnokdamensis J.S.Park&S.O.Oh,sp.nov.,Sarcogyne jejuensis J.S.Park&S.O.Oh,sp.nov),并发现了一个新记录(Sarcogyene oceanica K.Knudsen&Kocourk)。我们已经为韩国的Acarospora和Sarcogyne制定了分类密钥,并在这里一起报告了所有信息。
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引用次数: 0
Correction. 修正
IF 1.9 4区 生物学 Q3 Medicine Pub Date : 2023-08-03 eCollection Date: 2023-01-01 DOI: 10.1080/12298093.2023.2239652

[This corrects the article DOI: 10.1080/12298093.2022.2133808.].

[This corrects the article DOI: 10.1080/12298093.2022.2133808.].
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引用次数: 0
Neocucurbitaria chlamydospora sp. nov.: A Novel Species of the Family Cucurbitariaceae Isolated from a Stink Bug in Korea. Neocucurbitaria chlamydospora sp:从韩国臭虫中分离出的葫芦科新物种。
IF 1.6 4区 生物学 Q2 AGRONOMY Pub Date : 2023-05-12 eCollection Date: 2023-01-01 DOI: 10.1080/12298093.2023.2203973
Soo-Min Hong, Kallol Das, Seong-Keun Lim, Sang Jae Suh, Seung-Yeol Lee, Hee-Young Jung

The fungal strain KNUF-22-18B, belonging to Cucurbitariaceae, was discovered from a stink bug (Hygia lativentris) during the investigation of insect microbiota in Chungnam Province, South Korea. The colonies of the strain KNUF-22-18B were wooly floccose, white to brown in the center on oatmeal agar (OA), and the colonies were buff, margin even, and colorless, reverse white to yellowish toward the center on malt extract agar (MEA). The strain KNUF-22-18B produced pycnidia after 60 days of culturing on potato dextrose agar, but pycnidia were not observed on OA. On the contrary, N. keratinophila CBS 121759T abundantly formed superficial pycnidia on OA and MEA after a few days. The strain KNUF-22-18B produced chlamydospores subglobose to globose, mainly in the chain, with a small diameter of 4.4-8.8 μm. At the same time, N. keratinophila CBS 121759T displayed a globose terminal with a diameter of 8-10 μm. A multilocus phylogeny using the internal transcribed spacer regions, 28S rDNA large subunit, β-tubulin, and RNA polymerase II large subunit genes further validated the uniqueness of the strain. The detailed description and illustration of the proposed species as Neocucurbitaria chlamydospora sp. nov. from Korea was strongly supported by molecular phylogeny.

菌株 KNUF-22-18B 属于葫芦科,是在韩国忠南道调查昆虫微生物群时从蝽中发现的。菌株 KNUF-22-18B 在燕麦琼脂(OA)上的菌落呈絮状,中心为白色至棕色;在麦芽提取物琼脂(MEA)上的菌落呈水绿色,边缘均匀,无色,向中心反转为白色至淡黄色。菌株 KNUF-22-18B 在马铃薯葡萄糖琼脂上培养 60 天后产生菌丝,但在 OA 上未观察到菌丝。相反,N. keratinophila CBS 121759T 几天后在 OA 和 MEA 上大量形成表层菌丝。菌株 KNUF-22-18B 产生的衣壳孢子近球形至球形,主要为链状,直径较小,为 4.4-8.8 μm。与此同时,N. keratinophila CBS 121759T 的顶端呈球状,直径为 8-10 μm。利用内部转录间隔区、28S rDNA 大亚基、β-微管蛋白和 RNA 聚合酶 II 大亚基基因进行的多焦点系统进化进一步验证了该菌株的独特性。分子系统进化论有力地支持了将该菌株详细描述和说明为来自韩国的 Neocucurbitaria chlamydospora sp.
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引用次数: 0
Diversity and community structure of ectomycorrhizal mycorrhizal fungi in roots and rhizosphere soil of Abies koreana and Taxus cuspidata in Mt. Halla. 哈拉山韩国杉和紫杉根系和根瘤土壤中外生菌根真菌的多样性和群落结构。
IF 1.6 4区 生物学 Q2 AGRONOMY Pub Date : 2023-01-04 eCollection Date: 2022-01-01 DOI: 10.1080/12298093.2022.2161974
Ji-Eun Lee, Ahn-Heum Eom

In this study, the roots and rhizosphere soil of Abies koreana and Taxus cuspidata were collected from sites at two different altitudes on Mt. Halla. Ectomycorrhizal fungi (EMF) were identified by Illumina MiSeq sequencing. The proportion of EMF from the roots was 89% in A. koreana and 69% in T. cuspidata. Among EMF in rhizosphere soils, the genus Russula was the most abundant in roots of A. koreana (p < 0.05). The altitude did not affect the biodiversity of EMF communities but influenced fungal community composition. However, the host plants had the most significant effect on EMF communities. The result of the EMF community analysis showed that even if the EMF were isolated from the same altitudes, the EMF communities differed according to the host plant. The community similarity index of EMF in the roots of A. koreana was higher than that of T. cuspidata (p < 0.05). The results show that both altitude and host plants influenced the structure of EMF communities. Conifers inhabiting harsh sub-alpine environments rely strongly on symbiotic relationships with EMF. A. koreana is an endangered species with a higher host specificity of EMF and climate change vulnerability than T. cuspidata. This study provides insights into the EMF communities, which are symbionts of A. koreana, and our critical findings may be used to restore A. koreana.

本研究从哈拉山两个不同海拔的地点采集了韩国赤松(Abies koreana)和红豆杉(Taxus cuspidata)的根部和根瘤土壤。通过 Illumina MiSeq 测序鉴定了外生菌根真菌(EMF)。根部的外生真菌比例在 A. koreana 中为 89%,在 T. cuspidata 中为 69%。在根瘤土壤中的EMF中,朝鲜箭毒属在朝鲜箭毒根中的含量最高(朝鲜箭毒属高于箭毒属),朝鲜箭毒属是一种濒危物种,其EMF的寄主专一性和气候变化的脆弱性高于箭毒属(箭毒属是一种濒危物种,其EMF的寄主专一性和气候变化的脆弱性高于箭毒属)。这项研究提供了对共生于朝鲜箭毒的电磁场群落的深入了解,我们的重要发现可用于恢复朝鲜箭毒。
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引用次数: 0
Taxonomy of Botryotrichum luteum sp. nov. based on Morphology and Phylogeny Isolated from Soil in Korea. 基于形态和系统发育的韩国黄体芽孢霉的分类。
IF 1.9 4区 生物学 Q3 Medicine Pub Date : 2023-01-01 DOI: 10.1080/12298093.2023.2192613
Jung-Joo Ryu, Kallol Das, Seong-Keun Lim, Soo-Min Hong, Seung-Yeol Lee, Hee-Young Jung

In this study, a fungal strain KNUF-22-025 belonging to the genus Botryotrichum was isolated from the soil in Korea. The cultural and morphological characteristics of this strain differed from those of closely related species. On malt extract agar, strain KNUF-22-025 showed slower growth than most of the related species, except B. domesticum. The conidia size (9.6-21.1 × 9.9-18.4 µm) of strain KNUF-22-025 was larger than those of B. piluliferum, B. domesticum, and B. peruvianum but smaller than those of B. atrogriseum and B. iranicum. Conidiophores in strain KNUF-22-025 (137 µm) were longer than those in other closely related species but shorter than those in B. atrogriseum. Multi-locus analysis of molecular markers, such as ITS, 28S ribosomal DNA, RBP2, and TUB2 revealed that strain KNUF-22-025 was distinct from other Botryotrichum species. Thus, this strain is proposed as a novel species based on morphological characteristics along with molecular phylogeny and named Botryotrichum luteum sp. nov.

本研究从韩国土壤中分离到一株Botryotrichum属真菌KNUF-22-025。该菌株的培养和形态特征不同于那些密切相关的物种。在麦芽提取物琼脂上,菌株KNUF-22-025的生长速度比大多数相关菌种都要慢,但家蝇除外。菌株KNUF-22-025的分生孢子大小(9.6 ~ 21.1 × 9.9 ~ 18.4µm)大于绒毛芽孢杆菌、家芽孢杆菌和秘鲁芽孢杆菌,小于atrogriseum和iranicum芽孢杆菌。菌株KNUF-22-025的分生孢子长于其他近缘种(137µm),短于atrogriseum;ITS、28S核糖体DNA、RBP2、TUB2等分子标记的多位点分析表明,菌株KNUF-22-025与其他Botryotrichum有明显的差异。基于形态学特征和分子系统发育,本文将该菌株命名为Botryotrichum luteum sp. nov。
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引用次数: 0
Culture Conditions for Mycelial Growth and Anti-Cancer Properties of Termitomyces. 白蚁菌丝生长的培养条件及抗癌特性研究。
IF 1.9 4区 生物学 Q3 Medicine Pub Date : 2023-01-01 DOI: 10.1080/12298093.2023.2187614
Suphachai Tharavecharak, Corina N D'Alessandro-Gabazza, Masaaki Toda, Taro Yasuma, Taku Tsuyama, Ichiro Kamei, Esteban C Gabazza

Termitomyces sp. that grow in symbiosis with fungus-farming Termites have medicinal properties. However, they are rare in nature, and their artificial culture is challenging. The expression of AXL receptor tyrosine kinase and immune checkpoint molecules favor the growth of cancer cells. The study evaluated the optimal conditions for the artificial culture of Termitomyces and their inhibitory activity on AXL and immune checkpoint molecules in lung adenocarcinoma and melanoma cell lines. The culture of 45 strains of Termitomyces was compared. Five strains with marked growth rates were selected. Four of the selected strains form a single cluster by sequence analysis. The mycelium of 4 selected strains produces more fungal mass in potato dextrose broth than in a mixed media. The bark was the most appropriate solid substrate for Termitomyces mycelia culture. The mycelium of all five selected strains showed a higher growth rate under normal CO2 conditions. The culture broth, methanol, and ethyl acetate of one selected strain (T-120) inhibited the mRNA relative expression of AXL receptor tyrosine kinase and immune checkpoint molecules in cancer cell lines. Overall, these results suggest the potential usefulness of Termitomyces extracts as a co-adjuvant therapy in malignant diseases.

与真菌共生的白蚁具有药用价值。然而,它们在自然界是罕见的,它们的人工养殖是具有挑战性的。AXL受体酪氨酸激酶和免疫检查点分子的表达有利于癌细胞的生长。本研究评估了白蚁菌人工培养的最佳条件及其对肺腺癌和黑色素瘤细胞系AXL和免疫检查点分子的抑制活性。比较了45株白蚁菌的培养效果。选择了5株生长速率显著的菌株。通过序列分析,所选菌株中有4个形成单个聚类。4个菌株的菌丝体在马铃薯葡萄糖肉汤中比在混合培养基中产生更多的真菌质量。树皮是培养白蚁菌丝最适宜的固体基质。在正常CO2条件下,5个菌株的菌丝均表现出较高的生长速率。1株菌株(T-120)的培养液、甲醇和乙酸乙酯抑制癌细胞AXL受体酪氨酸激酶和免疫检查点分子mRNA的相对表达。总的来说,这些结果表明白蚁菌提取物作为恶性疾病的辅助治疗的潜在用途。
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引用次数: 0
Steroid Components of Marine-Derived Fungal Strain Penicillium levitum N33.2 and Their Biological Activities. 海洋源真菌利维青霉N33.2甾体成分及其生物活性研究
IF 1.9 4区 生物学 Q3 Medicine Pub Date : 2023-01-01 DOI: 10.1080/12298093.2023.2248717
Chi K Hoang, Cuong H Le, Dat T Nguyen, Hang T N Tran, Chinh V Luu, Huong M Le, Ha T H Tran

Genus Penicillium comprising the most important and extensively studied fungi has been well-known as a rich source of secondary metabolites. Our study aimed to analyze and investigate biological activities, including in vitro anti-cancer, anti-inflammatory and anti-diabetic properties, of metabolites from a marine-derived fungus belonging to P. levitum. The chemical compounds in the culture broth of P. levitum strain N33.2 were extracted with ethyl acetate. Followingly, chemical analysis of the extract leaded to the isolation of three ergostane-type steroid components, namely cerevisterol (1), ergosterol peroxide (2), and (3β,5α,22E)-ergosta-6,8(14),22-triene-3,5-diol (3). Among these, (3) was the most potent cytotoxic against human cancer cell lines Hep-G2, A549 and MCF-7 with IC50 values of 2.89, 18.51, and 16.47 µg/mL, respectively, while the compound (1) showed no significant effect against tested cancer cells. Anti-inflammatory properties of purified compounds were evaluated based on NO-production in LPS-induced murine RAW264.7 macrophages. As a result, tested compounds performed diverse inhibitory effects on NO production by the macrophages, with the most significant inhibition rate of 81.37 ± 1.35% at 25 µg/mL by the compound (2). Interestingly, compounds (2) and (3) exhibited inhibitory activities against pancreatic lipase and α-glucosidase enzymes in vitro assays. Our study brought out new data concerning the chemical properties and biological activities of isolated steroids from a P. levitum fungus.

青霉菌属是最重要和被广泛研究的真菌,它是次生代谢物的丰富来源。本研究旨在分析和研究一种海洋来源真菌P. levitum代谢物的体外抗癌、抗炎和抗糖尿病活性。采用乙酸乙酯法对levitum菌株N33.2培养液中的化学成分进行了提取。随后,对提取物进行化学分析,分离出三种麦角甾醇类类固醇成分,分别为cerevisterol(1)、麦角甾醇过氧化物(2)和(3β,5α,22E)-麦角甾醇-6,8(14)、22-triene-3,5-diol(3)。其中,(3)对人癌细胞Hep-G2、A549和MCF-7的细胞毒性最强,IC50值分别为2.89、18.51和16.47µg/mL,而化合物(1)对所测癌细胞无显著作用。通过lps诱导小鼠RAW264.7巨噬细胞no的生成来评价纯化化合物的抗炎特性。结果表明,所测试的化合物对巨噬细胞产生NO具有不同的抑制作用,在25µg/mL时,化合物的抑制率最高,为81.37±1.35%(2)。有趣的是,化合物(2)和(3)在体外实验中对胰脂肪酶和α-葡萄糖苷酶表现出抑制活性。本研究获得了从真菌中分离得到的甾体化合物的化学性质和生物活性的新数据。
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引用次数: 0
The Cell Wall Integrity MAP Kinase Signaling Pathway Is Required for Development, Pathogenicity, and Stress Adaption of the Pepper Anthracnose Fungus Colletotrichum scovillei. 细胞壁完整性MAP激酶信号通路是辣椒炭疽病真菌炭疽菌发育、致病性和胁迫适应所必需的。
IF 1.9 4区 生物学 Q3 Medicine Pub Date : 2023-01-01 DOI: 10.1080/12298093.2023.2220171
Teng Fu, Sung Wook Kang, Yong-Won Song, Kyoung Su Kim

The cell wall integrity (CWI) signaling pathway plays important roles in the dissemination and infection of several plant pathogenic fungi. However, its roles in the pepper fruit anthracnose fungus Colletotrichum scovillei remain uninvestigated. In this study, the major components of the CWI signaling pathway-CsMCK1 (MAPKKK), CsMKK1 (MAPKK), and CsMPS1 (MAPK)-were functionally characterized in C. scovillei via homology-dependent gene replacement. The ΔCsmck1, ΔCsmkk1, and ΔCsmps1 mutants showed impairments in fungal growth, conidiation, and tolerance to CWI and salt stresses. Moreover, ΔCsmck1, ΔCsmkk1, and ΔCsmps1 failed to develop anthracnose disease on pepper fruits due to defects in appressorium formation and invasive hyphae growth. These results suggest that CsMCK1, CsMKK1, and CsMPS1 play important roles in mycelial growth, conidiation, appressorium formation, plant infection, and stress adaption of C. scovillei. These findings will contribute to a better understanding of the roles of the CWI signaling pathway in the development of pepper fruit anthracnose disease.

细胞壁完整性(cell wall integrity, CWI)信号通路在几种植物病原真菌的传播和侵染中起重要作用。然而,其在辣椒果实炭疽病真菌炭疽菌中的作用尚不清楚。在本研究中,通过同源依赖的基因替换,对CWI信号通路的主要组分csmck1 (MAPKKK)、CsMKK1 (MAPKK)和CsMPS1 (MAPK)进行了功能表征。ΔCsmck1、ΔCsmkk1和ΔCsmps1突变体表现出真菌生长、分生和对CWI和盐胁迫的耐受性受损。另外,ΔCsmck1、ΔCsmkk1和ΔCsmps1由于附着胞形成缺陷和侵入性菌丝生长缺陷,在辣椒果实上未能发生炭疽病。综上所述,CsMCK1、CsMKK1和CsMPS1在scovillei菌丝生长、分生、附着胞形成、植株侵染和逆境适应等过程中发挥重要作用。这些发现将有助于更好地理解CWI信号通路在辣椒果实炭疽病发病中的作用。
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引用次数: 0
Genetic Clarification of Auricularia heimuer Strains Bred and Cultivated in Korea Using the ITS and IGS1 rDNA Region Sequences. 利用ITS和IGS1 rDNA区域序列对韩国黑木耳选育品系的遗传澄清
IF 1.9 4区 生物学 Q3 Medicine Pub Date : 2023-01-01 DOI: 10.1080/12298093.2023.2182024
Nitesh Pant, HyeongJin Noh, Won-Ho Lee, Seong Hwan Kim

Auricularia is one of the broadly cultivated edible mushrooms in Korea. Most of the Korean Auricularia strains used for cultivation and breeding are known as A. auricula-judae. Recently, this species has been reported to belong to a species complex. Therefore, this study was carried out to genetically clarify the bred and cultivated Korean A. auricula-judae strains. The internal transcribed spacer (ITS) and IGS1 rDNA region sequences were determined from 10 A. auricula-judae strains by PCR and sequencing. Variation in the nucleotide sequence and sequence length of the two rDNA regions were found among the seven A. auricula-judae strains. A maximum-likelihood (ML) phylogenetic tree based on the ITS sequences clearly placed all the 10 Korean A. auricula-judae strains in the A. heimuer clade of the A. auricula-judae complex. A. heimuer is diverged from A. auricula-judae. An ML phylogenetic tree based on the IGS1 sequences revealed the close relationship between Korean A. heimuer strains to Chinese A. heimuer strains. But each strain could be distinguishable by the IGS1 sequence. Furthermore, progeny strains in the seven Korean strains could be differentiated from their parental strains by the IGS1 sequence based phylogenetic tree. Our results are expected to be used to complement the distinction of domestic Auricularia cultivars.

黑木耳是韩国广泛种植的食用菌之一。大多数用于栽培和育种的韩国黑木耳菌株被称为A. auricula-judae。最近,有报道称该物种属于一个物种复合体。因此,本研究对韩国黑穗病菌的育种和栽培菌株进行了遗传澄清。采用PCR和测序方法,测定了10株耳木耳菌株的ITS和IGS1 rDNA区域序列。这两个rDNA区域的核苷酸序列和序列长度在7株耳鼠菌株中存在差异。基于ITS序列的最大似然(ML)系统发育树将所有10株韩国木耳-judae菌株明确定位于木耳-judae复合体的heimuer支。黑木耳是由黑木耳分化而来。基于IGS1序列的ML系统进化树显示,韩国与中国的海姆氏杆菌亲缘关系较近。但每个菌株都可以通过IGS1序列进行区分。此外,基于IGS1序列的系统发育树可以区分7株韩国菌株的后代菌株与亲本菌株。本研究结果可作为我国黑木耳品种鉴别的补充。
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引用次数: 0
Re-Examination of Several Elsinoë Species Reported from Japan. 日本报道的若干Elsinoë种的再检验。
IF 1.9 4区 生物学 Q3 Medicine Pub Date : 2023-01-01 DOI: 10.1080/12298093.2023.2219049
Anysia Hedy Ujat, Tsuyoshi Ono, Yukako Hattori, Chiharu Nakashima

Elsinoë are plant pathogenic fungi that cause scabs, spotted anthracnose, and some morphological distortions on various plants, including woody plants, economically important crops, and ornamental plants. Taxonomical reexamination of Elsinoë species in Japan has not yet been conducted based on the modern species criteria. In this study, several Japanese isolates were reexamine based on the morphological and molecular-phylogenetic analysis of the internal transcribed spacer region (ITS), large subunit gene (LSU)m and protein-coding gene such as RNA polymerase II subunit (rpb2) and Translation elongation factor 1-alpha (tef). Japanese isolates were divided into four clades and three new species, Elsinoë hydrangeae, E. sumire, and E. tanashiensis were proposed. One species, Sphaceloma akebiae, was transferred to the genus Elsinoë.

Elsinoë是植物病原真菌,可引起各种植物的结痂、斑点炭疽病和一些形态畸变,包括木本植物、经济上重要的作物和观赏植物。日本的Elsinoë种属尚未根据现代种属标准进行分类复核。本研究基于形态学和分子系统发育分析,对日本分离菌株的内部转录间隔区(ITS)、大亚基基因(LSU)m以及RNA聚合酶II亚基(rpb2)和翻译伸长因子1- α (tef)等蛋白编码基因进行了重新研究。将日本分离株划分为4个支系和3个新种,分别为Elsinoë绣球花(hydrangeae)、E. sumire和E. tanashiensis。一个种,Sphaceloma akebiae,被转移到Elsinoë属。
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引用次数: 0
期刊
Mycobiology
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