{"title":"Tribute to Professor Diana Anderson: A scientist extra ordinaire (11.12.1940 - 11.10.2024).","authors":"Alok Dhawan","doi":"10.1093/mutage/geaf002","DOIUrl":"https://doi.org/10.1093/mutage/geaf002","url":null,"abstract":"","PeriodicalId":18889,"journal":{"name":"Mutagenesis","volume":" ","pages":""},"PeriodicalIF":2.5,"publicationDate":"2025-01-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143008608","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Marina Lummertz Magenis, Isadora de Oliveira Monteiro, Adriani Paganini Damiani, Ligia Salvan Dagostin, Otávio Lúcio Possamai, Eduarda Behenck Medeiros, Josiane Budni, João Vitor Silvano Bittencourt, Carolini Mendes, Paulo Cesar Lock Silveira, Ana Letícia Hilario Garcia, Juliana da Silva, Wanessa de Feveri, Sabine A S Langie, Roger Godschalk, Vanessa Moraes de Andrade
The fetal brain is susceptible to programming effects during pregnancy, potentially leading to long-term consequences for offspring's cognitive health. Fructose intake is thought to adversely affect fetal brain development, whereas physical exercise before and during pregnancy may be protective. Therefore, this study aimed to assess biochemical and genotoxic changes in maternal hippocampi and behavioral, genotoxic, and biochemical alterations in offspring hippocampi. Seventy female mice were exposed to fructose (20%/L) and/or voluntary physical exercise (VPE) pre-pregnancy for eight weeks, and then mated and exposure was continued until weaning. Offspring were evaluated at 60 days old using behavioral test, genotoxic and biochemical markers. Fructose induced long-term memory impairment in male offspring, which was alleviated by VPE. VPE mitigated DNA damage from maternal fructose consumption in both maternal and offspring hippocampi in female offspring, VPE increased levels of APE-1, NRF2, and CREB proteins, whereas in males, OGG1 levels upregulate. Fructose consumption led to oxidative stress and antioxidant defense alterations in offspring, while VPE mitigated these effects. Telomere shortening was observed in male offspring from mothers who consumed fructose during pregnancy. Our findings suggest that exposure to fructose during (pre)pregnancy and lactation has adverse effects on offspring's hippocampi later in life, and VPE has a protective effect. Overall, the study underscores the significance of maternal dietary and physical habits on long term offspring health, with an emphasis on implications for adult cognitive function.
{"title":"Maternal exercise before and during pregnancy protects against genotoxicity and promotes offspring hippocampal health in mice prenatally exposed to high fructose.","authors":"Marina Lummertz Magenis, Isadora de Oliveira Monteiro, Adriani Paganini Damiani, Ligia Salvan Dagostin, Otávio Lúcio Possamai, Eduarda Behenck Medeiros, Josiane Budni, João Vitor Silvano Bittencourt, Carolini Mendes, Paulo Cesar Lock Silveira, Ana Letícia Hilario Garcia, Juliana da Silva, Wanessa de Feveri, Sabine A S Langie, Roger Godschalk, Vanessa Moraes de Andrade","doi":"10.1093/mutage/geaf001","DOIUrl":"https://doi.org/10.1093/mutage/geaf001","url":null,"abstract":"<p><p>The fetal brain is susceptible to programming effects during pregnancy, potentially leading to long-term consequences for offspring's cognitive health. Fructose intake is thought to adversely affect fetal brain development, whereas physical exercise before and during pregnancy may be protective. Therefore, this study aimed to assess biochemical and genotoxic changes in maternal hippocampi and behavioral, genotoxic, and biochemical alterations in offspring hippocampi. Seventy female mice were exposed to fructose (20%/L) and/or voluntary physical exercise (VPE) pre-pregnancy for eight weeks, and then mated and exposure was continued until weaning. Offspring were evaluated at 60 days old using behavioral test, genotoxic and biochemical markers. Fructose induced long-term memory impairment in male offspring, which was alleviated by VPE. VPE mitigated DNA damage from maternal fructose consumption in both maternal and offspring hippocampi in female offspring, VPE increased levels of APE-1, NRF2, and CREB proteins, whereas in males, OGG1 levels upregulate. Fructose consumption led to oxidative stress and antioxidant defense alterations in offspring, while VPE mitigated these effects. Telomere shortening was observed in male offspring from mothers who consumed fructose during pregnancy. Our findings suggest that exposure to fructose during (pre)pregnancy and lactation has adverse effects on offspring's hippocampi later in life, and VPE has a protective effect. Overall, the study underscores the significance of maternal dietary and physical habits on long term offspring health, with an emphasis on implications for adult cognitive function.</p>","PeriodicalId":18889,"journal":{"name":"Mutagenesis","volume":" ","pages":""},"PeriodicalIF":2.5,"publicationDate":"2025-01-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142971678","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Congying Zheng, Sergey Shaposhnikov, Andrew Collins, Gunnar Brunborg, Amaya Azqueta, Sabine A S Langie, Maria Dusinka, Jana Slyskova, Pavel Vodicka, Frederik-Jan van Schooten, Stefano Bonassi, Mirta Milic, Irene Orlow, Roger Godschalk
Nucleotide excision repair (NER) is crucial for repairing bulky lesions and crosslinks in DNA caused by exogenous and endogenous genotoxins. The number of studies that have considered DNA repair as a biomarker is limited, and therefore one of the primary objectives of the European COST Action hCOMET (CA15132) was to assemble and analyze a pooled database of studies with data on NER activity. The database comprised 738 individuals, gathered from 5 laboratories that ran population studies using the comet-based in vitro DNA repair assay. NER activity data in peripheral blood mononuclear cells (PBMCs) were normalized and correlated with various host-related factors, including sex, age, body mass index (BMI), and smoking habits. This multifaceted analysis uncovered significantly higher NER activity in female participants compared to males (1.08 ± 0.74 vs. 0.92 ± 0.71; P = 0.002). Higher NER activity was seen in older subjects (> 30 years), and the effect of age was most pronounced in the oldest females, particularly those over 70 years (P = 0.001). Females with a normal BMI (< 25 kg/m2) exhibited the highest levels of NER, whereas the lowest NER was observed in overweight males (BMI ≥ 25 kg/m2). No independent effect of smoking was found. After stratification by sex and BMI, higher NER was observed in smoking males (P = 0.017). The biological implication of higher or lower repair capacity remains unclear; the inclusion of DNA repair as a biomarker in molecular epidemiological trials should elucidate the link between health and disease status.
核苷酸切除修复(NER)对于修复外源性和内源性基因毒素造成的DNA大块病变和交联至关重要。将 DNA 修复作为生物标志物的研究数量有限,因此,欧洲 COST 行动 hCOMET(CA15132)的主要目标之一就是收集和分析具有 NER 活性数据的研究资料库。该数据库由 738 个个体组成,这些个体来自 5 个使用基于彗星的体外 DNA 修复测定法进行群体研究的实验室。对外周血单核细胞(PBMC)中的 NER 活性数据进行了归一化处理,并将其与各种宿主相关因素(包括性别、年龄、体重指数(BMI)和吸烟习惯)相关联。这种多方面的分析发现,女性参与者的核酸还原酶活性明显高于男性(1.08 ± 0.74 vs. 0.92 ± 0.71; P = 0.002)。年龄较大(大于 30 岁)的受试者 NER 活性较高,年龄的影响在最年长的女性,尤其是 70 岁以上的女性中最为明显(P = 0.001)。体重指数正常(< 25 kg/m2)的女性的核辐射强度最高,而超重男性(体重指数≥ 25 kg/m2)的核辐射强度最低。没有发现吸烟的独立影响。按性别和体重指数分层后,吸烟男性的净核反应堆更高(P = 0.017)。较高或较低的修复能力对生物学的影响尚不清楚;将 DNA 修复作为一种生物标志物纳入分子流行病学试验应能阐明健康与疾病状况之间的联系。
{"title":"A pooled analysis of host factors that affect nucleotide excision repair in humans.","authors":"Congying Zheng, Sergey Shaposhnikov, Andrew Collins, Gunnar Brunborg, Amaya Azqueta, Sabine A S Langie, Maria Dusinka, Jana Slyskova, Pavel Vodicka, Frederik-Jan van Schooten, Stefano Bonassi, Mirta Milic, Irene Orlow, Roger Godschalk","doi":"10.1093/mutage/geae028","DOIUrl":"https://doi.org/10.1093/mutage/geae028","url":null,"abstract":"<p><p>Nucleotide excision repair (NER) is crucial for repairing bulky lesions and crosslinks in DNA caused by exogenous and endogenous genotoxins. The number of studies that have considered DNA repair as a biomarker is limited, and therefore one of the primary objectives of the European COST Action hCOMET (CA15132) was to assemble and analyze a pooled database of studies with data on NER activity. The database comprised 738 individuals, gathered from 5 laboratories that ran population studies using the comet-based in vitro DNA repair assay. NER activity data in peripheral blood mononuclear cells (PBMCs) were normalized and correlated with various host-related factors, including sex, age, body mass index (BMI), and smoking habits. This multifaceted analysis uncovered significantly higher NER activity in female participants compared to males (1.08 ± 0.74 vs. 0.92 ± 0.71; P = 0.002). Higher NER activity was seen in older subjects (> 30 years), and the effect of age was most pronounced in the oldest females, particularly those over 70 years (P = 0.001). Females with a normal BMI (< 25 kg/m2) exhibited the highest levels of NER, whereas the lowest NER was observed in overweight males (BMI ≥ 25 kg/m2). No independent effect of smoking was found. After stratification by sex and BMI, higher NER was observed in smoking males (P = 0.017). The biological implication of higher or lower repair capacity remains unclear; the inclusion of DNA repair as a biomarker in molecular epidemiological trials should elucidate the link between health and disease status.</p>","PeriodicalId":18889,"journal":{"name":"Mutagenesis","volume":" ","pages":""},"PeriodicalIF":2.5,"publicationDate":"2024-12-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142818626","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Bruna Alves Alonso Martins, Ana Leticia Hilario Garcia, Malu Siqueira Borges, Juliana Picinini, Enaile Tuliczewski Serpa, Daiane Dias Ribeiro Nobles, Luana Letícia Silva, Daiana Dalberto, Alana Witt Hansen, Fernando Rosado Spilki, Lavínia Schuler-Faccini, Pabulo Henrique Rampelotto, Juliana Da Silva
The COVID-19 pandemic has led to the emergence of acute and chronic post-COVID syndromes, which present diverse clinical manifestations. The underlying pathophysiology of these conditions is not yet fully understood, but genetic instability has been proposed as a potential contributing factor. This study aimed to explore the differential impact of physical and psychological health factors on genetic instability in individuals with acute and chronic post-COVID syndromes. In this study, three groups of subjects were analyzed: a control group, an acute post-COVID group, and a chronic post-COVID group, with a total of 231 participants. The participants were assessed using a questionnaire for long-COVID-19COVID, and female participants reported more symptoms than male participants in areas related to fatigue, memory, mental health, and well-being during the chronic phase. Genetic instability was assessed using the comet assay, and participants' physical and psychological profiles were evaluated. The overall results showed no significant differences in DNA damage, as measured by the comet assay, among the three groups, suggesting that genetic instability, as assessed by this method, may not be a primary driver of the distinct clinical presentations observed in post-COVID syndromes. However, when gender was considered, male participants in the acute long COVID group exhibited higher levels of genetic instability compared to females. Multiple linear regression analysis revealed that gender, age, and waist circumference were significant predictors of DNA damage. Among females in the acute group, sexual health, and eye-related symptoms significantly influenced the increase in DNA damage. These findings indicate the need for further investigation on the gender-specific differences in genetic instability and their potential implications for the pathophysiology of post-COVID syndromes. Exploring alternative markers of genetic instability and the interplay between genetic, inflammatory, and cellular processes could provide valuable insights for the management of these debilitating post-viral sequelae.
COVID-19 大流行导致出现了急性和慢性后 COVID 综合征,其临床表现多种多样。这些病症的潜在病理生理学尚不完全清楚,但遗传不稳定性已被认为是潜在的诱因之一。本研究旨在探讨生理和心理健康因素对急性和慢性后 COVID 综合征患者遗传不稳定性的不同影响。本研究分析了三组受试者:对照组、急性后 COVID 组和慢性后 COVID 组,共计 231 人。研究人员使用长COVID-19COVID调查问卷对受试者进行了评估,在慢性期,女性受试者比男性受试者报告了更多与疲劳、记忆力、心理健康和幸福感相关的症状。使用彗星测定法对遗传不稳定性进行了评估,并对参与者的身体和心理状况进行了评估。总体结果表明,用彗星测定法测量的 DNA 损伤在三个组别之间没有明显差异,这表明用这种方法评估的遗传不稳定性可能不是导致后 COVID 综合征出现不同临床表现的主要原因。然而,如果考虑到性别因素,急性长COVID组中男性参与者的遗传不稳定性水平高于女性。多元线性回归分析显示,性别、年龄和腰围是 DNA 损伤的重要预测因素。在急性组的女性中,性健康和眼部相关症状对DNA损伤的增加有明显影响。这些发现表明,有必要进一步研究遗传不稳定性的性别差异及其对COVID后综合征病理生理学的潜在影响。探索遗传不稳定性的替代标志物以及遗传、炎症和细胞过程之间的相互作用可为治疗这些使人衰弱的病毒后遗症提供有价值的见解。
{"title":"Exploring the relationship between genetic instability and health outcomes in acute and chronic post-COVID syndrome.","authors":"Bruna Alves Alonso Martins, Ana Leticia Hilario Garcia, Malu Siqueira Borges, Juliana Picinini, Enaile Tuliczewski Serpa, Daiane Dias Ribeiro Nobles, Luana Letícia Silva, Daiana Dalberto, Alana Witt Hansen, Fernando Rosado Spilki, Lavínia Schuler-Faccini, Pabulo Henrique Rampelotto, Juliana Da Silva","doi":"10.1093/mutage/geae022","DOIUrl":"10.1093/mutage/geae022","url":null,"abstract":"<p><p>The COVID-19 pandemic has led to the emergence of acute and chronic post-COVID syndromes, which present diverse clinical manifestations. The underlying pathophysiology of these conditions is not yet fully understood, but genetic instability has been proposed as a potential contributing factor. This study aimed to explore the differential impact of physical and psychological health factors on genetic instability in individuals with acute and chronic post-COVID syndromes. In this study, three groups of subjects were analyzed: a control group, an acute post-COVID group, and a chronic post-COVID group, with a total of 231 participants. The participants were assessed using a questionnaire for long-COVID-19COVID, and female participants reported more symptoms than male participants in areas related to fatigue, memory, mental health, and well-being during the chronic phase. Genetic instability was assessed using the comet assay, and participants' physical and psychological profiles were evaluated. The overall results showed no significant differences in DNA damage, as measured by the comet assay, among the three groups, suggesting that genetic instability, as assessed by this method, may not be a primary driver of the distinct clinical presentations observed in post-COVID syndromes. However, when gender was considered, male participants in the acute long COVID group exhibited higher levels of genetic instability compared to females. Multiple linear regression analysis revealed that gender, age, and waist circumference were significant predictors of DNA damage. Among females in the acute group, sexual health, and eye-related symptoms significantly influenced the increase in DNA damage. These findings indicate the need for further investigation on the gender-specific differences in genetic instability and their potential implications for the pathophysiology of post-COVID syndromes. Exploring alternative markers of genetic instability and the interplay between genetic, inflammatory, and cellular processes could provide valuable insights for the management of these debilitating post-viral sequelae.</p>","PeriodicalId":18889,"journal":{"name":"Mutagenesis","volume":" ","pages":"287-300"},"PeriodicalIF":2.5,"publicationDate":"2024-11-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142109654","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Sandra L Hernández-Ojeda, Javier Jesús Espinosa-Aguirre, Rafael Camacho-Carranza, Jessica Amacosta-Castillo, Ricardo Cárdenas-Ávila
An ethanol extract of Piper auritum leaves (PAEE) inhibits the mutagenic effect of three food-borne aromatic amines (2-amino-1-methyl-6-phenylimidazo[4,5-b]pyridine (PhIP); 2-amino-3,8-dimethylimidazo[4,5-f]quinoxaline (MeIQx); 2-amino-3,4,8-trimethylimidazo[4,5-f]quinoxaline (4,8-DiMeIQx)) in the TA98 Salmonella typhimurium strain. Preincubation with MeIQx demonstrated in mutagenesis experiments that inhibition of Cytochrome P450 (CYP), as well as direct interaction between component(s) of the plant extract with mutagens, might account for the antimutagenic observed effect. Gas chromatography/mass spectrometry analysis revealed that safrole (50.7%), α-copaene (7.7%), caryophyllene (7.2%), β-pinene (4.2%), γ-terpinene (4.1%), and pentadecane (4.1%) as the main components (PAEE). Piper extract and safrole were able to inhibit the rat liver microsomal CYP1A1 activity that participates in the amines metabolism, leading to the formation of the ultimate mutagenic/ molecules. According to this, safrole and PAEE-inhibited MeIQx mutagenicity but not that of the direct mutagen 2-nitrofluorene. No mutagenicity of plant extract or safrole was detected. This study shows that PAEE and its main component safrole are associated with the inhibition of heterocyclic amines activation due in part to the inhibition of CYP1A subfamily activity.
{"title":"Piper auritum ethanol extract is a potent antimutagen against food-borne aromatic amines: mechanisms of action and chemical composition.","authors":"Sandra L Hernández-Ojeda, Javier Jesús Espinosa-Aguirre, Rafael Camacho-Carranza, Jessica Amacosta-Castillo, Ricardo Cárdenas-Ávila","doi":"10.1093/mutage/geae011","DOIUrl":"10.1093/mutage/geae011","url":null,"abstract":"<p><p>An ethanol extract of Piper auritum leaves (PAEE) inhibits the mutagenic effect of three food-borne aromatic amines (2-amino-1-methyl-6-phenylimidazo[4,5-b]pyridine (PhIP); 2-amino-3,8-dimethylimidazo[4,5-f]quinoxaline (MeIQx); 2-amino-3,4,8-trimethylimidazo[4,5-f]quinoxaline (4,8-DiMeIQx)) in the TA98 Salmonella typhimurium strain. Preincubation with MeIQx demonstrated in mutagenesis experiments that inhibition of Cytochrome P450 (CYP), as well as direct interaction between component(s) of the plant extract with mutagens, might account for the antimutagenic observed effect. Gas chromatography/mass spectrometry analysis revealed that safrole (50.7%), α-copaene (7.7%), caryophyllene (7.2%), β-pinene (4.2%), γ-terpinene (4.1%), and pentadecane (4.1%) as the main components (PAEE). Piper extract and safrole were able to inhibit the rat liver microsomal CYP1A1 activity that participates in the amines metabolism, leading to the formation of the ultimate mutagenic/ molecules. According to this, safrole and PAEE-inhibited MeIQx mutagenicity but not that of the direct mutagen 2-nitrofluorene. No mutagenicity of plant extract or safrole was detected. This study shows that PAEE and its main component safrole are associated with the inhibition of heterocyclic amines activation due in part to the inhibition of CYP1A subfamily activity.</p>","PeriodicalId":18889,"journal":{"name":"Mutagenesis","volume":" ","pages":"301-309"},"PeriodicalIF":2.5,"publicationDate":"2024-11-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11529617/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140194216","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Fisnik H Asllani, Avdulla J Alija, Peter M Eckl, Nikolaus Bresgen
River water in Kosovo is exposed to various discharges from industrial and agricultural activities as well as to urban wastewater. Rivers Sitnica and Drenica are among the most affected ones and water samples drawn from these rivers show the presence of various toxic substances. Genotoxic effects are seen in fish living in these rivers indicating a cytotoxic and mutagenic potential of the river water. Aiming at substantiating these observations, we assessed the cyto- and genotoxic effects of water samples collected at different locations from the Drenica and Sitnica rivers. Samples drawn from Lake Badovc served for comparison. To address seasonal effects, samples were collected at different seasons/time points during the period of summer 2016-spring 2018. The water samples were analyzed employing primary rat hepatocytes as a reliable in vitro cell model for the assessment of cytotoxic effects (mitotic arrest and cell death) and DNA damage/genotoxicity (micronucleus assay and Comet assay). The results do not account for significant effects associated with specific locations but demonstrate seasonal differences of the genotoxic potential of the water samples collected along both rivers, which are accompanied by a limited cytotoxic potential. Our data provide substantial support to earlier observations and strongly warrant the need for continuous chemical as well as biological monitoring of the river water in Kosovo, focusing on improved toxicant profiling of the river water and investigations addressing the observed seasonal variations.
科索沃的河水受到来自工业和农业活动的各种排放物以及城市废水的影响。Sitnica 河和 Drenica 河是受影响最严重的河流之一,从这些河流提取的水样显示存在各种有毒物质。生活在这些河流中的鱼类也受到遗传毒性的影响,这表明河水具有细胞毒性和诱变潜能。为了证实这些观察结果,我们评估了在德雷尼察河和锡特尼察河不同地点采集的水样的细胞毒性和基因毒性效应。从巴多夫奇湖采集的样本作为对比。为了应对季节性影响,我们在 2016 年夏季至 2018 年春季期间的不同季节/时间点采集了样本。水样采用原代大鼠肝细胞作为可靠的体外细胞模型进行分析,以评估细胞毒性效应(有丝分裂停止和细胞死亡)和 DNA 损伤/遗传毒性(微核检测、彗星检测)。研究结果并没有考虑到特定地点所产生的重大影响,但证明了在两条河流沿岸采集的水样的遗传毒性潜能存在季节性差异,同时细胞毒性潜能也有限。我们的数据为之前的观察提供了大量支持,并有力地证明有必要对科索沃的河水进行持续的化学和生物监测,重点是改进河水的毒物分析,并调查所观察到的季节性变化。
{"title":"Cyto- and genotoxicity evaluation of water samples collected from two rivers in the Kosovo.","authors":"Fisnik H Asllani, Avdulla J Alija, Peter M Eckl, Nikolaus Bresgen","doi":"10.1093/mutage/geae019","DOIUrl":"10.1093/mutage/geae019","url":null,"abstract":"<p><p>River water in Kosovo is exposed to various discharges from industrial and agricultural activities as well as to urban wastewater. Rivers Sitnica and Drenica are among the most affected ones and water samples drawn from these rivers show the presence of various toxic substances. Genotoxic effects are seen in fish living in these rivers indicating a cytotoxic and mutagenic potential of the river water. Aiming at substantiating these observations, we assessed the cyto- and genotoxic effects of water samples collected at different locations from the Drenica and Sitnica rivers. Samples drawn from Lake Badovc served for comparison. To address seasonal effects, samples were collected at different seasons/time points during the period of summer 2016-spring 2018. The water samples were analyzed employing primary rat hepatocytes as a reliable in vitro cell model for the assessment of cytotoxic effects (mitotic arrest and cell death) and DNA damage/genotoxicity (micronucleus assay and Comet assay). The results do not account for significant effects associated with specific locations but demonstrate seasonal differences of the genotoxic potential of the water samples collected along both rivers, which are accompanied by a limited cytotoxic potential. Our data provide substantial support to earlier observations and strongly warrant the need for continuous chemical as well as biological monitoring of the river water in Kosovo, focusing on improved toxicant profiling of the river water and investigations addressing the observed seasonal variations.</p>","PeriodicalId":18889,"journal":{"name":"Mutagenesis","volume":" ","pages":"310-317"},"PeriodicalIF":2.5,"publicationDate":"2024-11-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141907078","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Expression of Concern: Divergent molecular profile of PIK3CA gene in arsenic-associated bladder carcinoma.","authors":"","doi":"10.1093/mutage/geae016","DOIUrl":"10.1093/mutage/geae016","url":null,"abstract":"","PeriodicalId":18889,"journal":{"name":"Mutagenesis","volume":" ","pages":"327"},"PeriodicalIF":2.5,"publicationDate":"2024-11-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141545047","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
DNA ligase (LIG) I and IIIα finalize base excision repair (BER) by sealing a nick product after nucleotide insertion by DNA polymerase (pol) β at the downstream steps. We previously demonstrated that a functional interplay between polβ and BER ligases is critical for efficient repair, and polβ mismatch or oxidized nucleotide insertions confound the final ligation step. Yet, how targeting downstream enzymes with small molecule inhibitors could affect this coordination remains unknown. Here, we report that DNA ligase inhibitors, L67 and L82-G17, slightly enhance hypersensitivity to oxidative stress-inducing agent, KBrO3, in polβ+/+ cells more than polβ-/- null cells. We showed less efficient ligation after polβ nucleotide insertions in the presence of the DNA ligase inhibitors. Furthermore, the mutations at the ligase inhibitor binding sites (G448, R451, A455) of LIG1 significantly affect nick DNA binding affinity and nick sealing efficiency. Finally, our results demonstrated that the BER ligases seal a gap repair intermediate by the effect of polβ inhibitor that diminishes gap filling activity. Overall, our results contribute to understand how the BER inhibitors against downstream enzymes, polβ, LIG1, and LIGIIIα, could impact the efficiency of gap filling and subsequent nick sealing at the final steps leading to the formation of deleterious repair intermediates.
DNA 连接酶(LIG)Ⅰ和Ⅲα通过在下游步骤中封闭 DNA 聚合酶(pol)β 插入核苷酸后的缺口产物,最终完成碱基切除修复(BER)。我们以前曾证明,polβ 和 BER 连接酶之间的功能性相互作用对高效修复至关重要,而 polβ 错配或氧化核苷酸插入会干扰最后的连接步骤。然而,用小分子抑制剂靶向下游酶如何影响这种协调仍是未知数。在这里,我们报告了 DNA 连接酶抑制剂 L67 和 L82-G17,与 polβ-/- null 细胞相比,它们能轻微增强 polβ+/+ 细胞对氧化应激诱导剂 KBrO3 的超敏性。我们发现,在DNA连接酶抑制剂存在的情况下,polβ核苷酸插入后的连接效率较低。此外,LIG1的连接酶抑制剂结合位点(G448、R451、A455)突变会显著影响缺口DNA结合亲和力和缺口封闭效率。最后,我们的研究结果表明,BER 连接酶在 polβ 抑制剂的作用下密封了缺口修复中间体,而 polβ 抑制剂会降低缺口填充活性。总之,我们的研究结果有助于了解针对下游酶(polβ、LIG1 和 LIGIIIα)的 BER 抑制剂会如何影响缺口填充的效率以及随后在导致有害修复中间体形成的最后步骤中的缺口密封。
{"title":"Impact of DNA ligase inhibition on the nick sealing of polβ nucleotide insertion products at the downstream steps of base excision repair pathway.","authors":"Danah Almohdar, Pradnya Kamble, Chandrakala Basavannacharya, Mitchell Gulkis, Ozlem Calbay, Shuang Huang, Satya Narayan, Melike Çağlayan","doi":"10.1093/mutage/geae013","DOIUrl":"10.1093/mutage/geae013","url":null,"abstract":"<p><p>DNA ligase (LIG) I and IIIα finalize base excision repair (BER) by sealing a nick product after nucleotide insertion by DNA polymerase (pol) β at the downstream steps. We previously demonstrated that a functional interplay between polβ and BER ligases is critical for efficient repair, and polβ mismatch or oxidized nucleotide insertions confound the final ligation step. Yet, how targeting downstream enzymes with small molecule inhibitors could affect this coordination remains unknown. Here, we report that DNA ligase inhibitors, L67 and L82-G17, slightly enhance hypersensitivity to oxidative stress-inducing agent, KBrO3, in polβ+/+ cells more than polβ-/- null cells. We showed less efficient ligation after polβ nucleotide insertions in the presence of the DNA ligase inhibitors. Furthermore, the mutations at the ligase inhibitor binding sites (G448, R451, A455) of LIG1 significantly affect nick DNA binding affinity and nick sealing efficiency. Finally, our results demonstrated that the BER ligases seal a gap repair intermediate by the effect of polβ inhibitor that diminishes gap filling activity. Overall, our results contribute to understand how the BER inhibitors against downstream enzymes, polβ, LIG1, and LIGIIIα, could impact the efficiency of gap filling and subsequent nick sealing at the final steps leading to the formation of deleterious repair intermediates.</p>","PeriodicalId":18889,"journal":{"name":"Mutagenesis","volume":" ","pages":"263-279"},"PeriodicalIF":2.5,"publicationDate":"2024-11-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11529620/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140912533","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Systemic oxidative stress stemming from increased free radical production and reduced antioxidant capacity are common characteristics of obese individuals. Using hydrogen peroxide (H2O2) to induce DNA damage in vitro, in peripheral blood mononuclear cells (PBMCs) from obese subjects and controls, the DNA protective ability of dihidroqercetin (DHQ) and biochaga (B) alone or in combination, were evaluated. The effects of DHQ and B were estimated under two experimental conditions: pre-treatment, where cells were pre-incubated with the substances prior to H2O2 exposure; and post-treatment when cells were first exposed to H2 H2O2, and further treated with the compounds. DNA damage was evaluated using the comet assay. The results of pre- and post-treatment showed a significant decrease in DNA damage produced by H2O2 in the obese group. This decrease was not significant in control group probably due to a small number of subjects in this pilot study. More prominent attenuation was noted in the pre-treatment with DHQ (250 μg/ml). Analysis of antioxidant properties revealed that DHQ's remarkable reducing power, 1,1-diphenyl-2-picrylhydrazyl (DPPH) scavenging activity, and potent∙OH scavenging properties may contribute to strong attenuation of H2O2-induced DNA damage. Also, B showed strong reducing power, DPPH, and ∙OH scavenging ability, while reducing power and DPPH scavenger effects were increased in the presence of DHQ. Conclusively, DHQ and B may reduce H2O2-induced DNA damage in PBMCs from obese subjects when challenged in vitro, and could be valuable tools in future research against oxidative damage-related conditions.
自由基生成增加和抗氧化能力降低导致的全身氧化应激是肥胖者的共同特征。研究人员利用过氧化氢(H2O2)在体外诱导肥胖者和对照组的外周血单核细胞(PBMCs)的 DNA 损伤,评估了二氢槲皮素(DHQ)和生物茶碱(Biochaga)单独或联合使用对 DNA 的保护能力。在两种实验条件下评估了 DHQ 和 B 的作用:预处理,即在细胞暴露于 H2O2 之前用这两种物质预孵育;后处理,即细胞首先暴露于 H2O2,然后再用这两种化合物进一步处理。DNA 损伤采用彗星试验进行评估。处理前和处理后的结果显示,肥胖组 H2O2 造成的 DNA 损伤显著减少。在对照组中,这种减少并不明显,这可能是由于这项试验研究的受试者人数较少。在使用 DHQ(250 微克/毫升)进行预处理时,减弱效果更为明显。对抗氧化特性的分析表明,DHQ具有显著的还原力、1,1-二苯基-2-苦基肼(DPPH)清除活性和强效的∙OH清除特性,这些特性可能有助于显著减轻H2O2诱导的DNA损伤。此外,B 具有很强的还原力、DPPH 和 ∙OH 清除能力,而还原力和 DPPH 清除效果在 DHQ 的存在下会增强。总之,DHQ 和 B 可减少肥胖者的白细胞介导细胞在体外受到 H2O2 诱导的 DNA 损伤,可作为未来研究氧化损伤相关病症的重要工具。
{"title":"Dihydroquercetin and biochaga reduce H2O2-induced DNA damage in peripheral blood mononuclear cells of obese women in vitro-a pilot study.","authors":"Lada Živković, Andrea Pirković, Dijana Topalović, Sunčica Borozan, Vladan Bajić, Vesna Dimitrijević Srećković, Ninoslav Djelić, Hristina Petrović, Mirta Milić, Biljana Spremo-Potparević","doi":"10.1093/mutage/geae017","DOIUrl":"10.1093/mutage/geae017","url":null,"abstract":"<p><p>Systemic oxidative stress stemming from increased free radical production and reduced antioxidant capacity are common characteristics of obese individuals. Using hydrogen peroxide (H2O2) to induce DNA damage in vitro, in peripheral blood mononuclear cells (PBMCs) from obese subjects and controls, the DNA protective ability of dihidroqercetin (DHQ) and biochaga (B) alone or in combination, were evaluated. The effects of DHQ and B were estimated under two experimental conditions: pre-treatment, where cells were pre-incubated with the substances prior to H2O2 exposure; and post-treatment when cells were first exposed to H2 H2O2, and further treated with the compounds. DNA damage was evaluated using the comet assay. The results of pre- and post-treatment showed a significant decrease in DNA damage produced by H2O2 in the obese group. This decrease was not significant in control group probably due to a small number of subjects in this pilot study. More prominent attenuation was noted in the pre-treatment with DHQ (250 μg/ml). Analysis of antioxidant properties revealed that DHQ's remarkable reducing power, 1,1-diphenyl-2-picrylhydrazyl (DPPH) scavenging activity, and potent∙OH scavenging properties may contribute to strong attenuation of H2O2-induced DNA damage. Also, B showed strong reducing power, DPPH, and ∙OH scavenging ability, while reducing power and DPPH scavenger effects were increased in the presence of DHQ. Conclusively, DHQ and B may reduce H2O2-induced DNA damage in PBMCs from obese subjects when challenged in vitro, and could be valuable tools in future research against oxidative damage-related conditions.</p>","PeriodicalId":18889,"journal":{"name":"Mutagenesis","volume":" ","pages":"318-326"},"PeriodicalIF":2.5,"publicationDate":"2024-11-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141633980","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
DNA methylation is an important mechanism in the regulation of gene expression and maintenance of genomic integrity. Aberrant DNA methylation is an early event in carcinogenesis. DNA methyltransferase inhibitors are used to restore aberrant DNA methylation and inhibit tumor growth. Evaluation of DNA methylation level is important for an effective anti-cancer therapy. In the present study, the determination of global DNA methylation levels in patients with urinary bladder cancer was proposed. The methylation-sensitive comet assay determined the global DNA methylation level at the level of single cells. McrBC enzyme, a methylation-sensitive restriction endonuclease, was used for enzymatic digestion to generate additional breaks at methylated sites. % DNA methylation level was significantly higher in patients with bladder cancer compared to the control group. The clinical performance of % DNA methylation analysis by methylation-sensitive comet assay was evaluated by ROC curve. Using the cutoff value of 6.5% DNA methylation, 92% sensitivity, and 42% specificity were obtained. In conclusion, global DNA methylation measured by methylation-sensitive comet assay may be a promising noninvasive biomarker that reduces interventional tests required in the diagnosis and follow-up of urinary bladder cancer.
DNA 甲基化是调控基因表达和维护基因组完整性的重要机制。异常的 DNA 甲基化是致癌的早期事件。DNA 甲基转移酶抑制剂可用于恢复异常的 DNA 甲基化,抑制肿瘤生长。评估 DNA 甲基化水平对有效抗癌治疗非常重要。本研究提出了测定膀胱癌患者DNA甲基化水平的方法。甲基化敏感彗星测定法可在单细胞水平上确定全球 DNA 甲基化水平。使用甲基化敏感限制性内切酶 McrBC 进行酶解,在甲基化位点产生额外的断裂。与对照组相比,膀胱癌患者的 DNA 甲基化率水平明显较高。采用甲基化敏感彗星分析法进行的 DNA 甲基化率分析的临床表现以 ROC 曲线进行评估。以 6.5% 的 DNA 甲基化率为临界值,灵敏度为 92%,特异度为 42%。总之,用甲基化敏感彗星测定法测量全局 DNA 甲基化可能是一种很有前途的非侵入性生物标志物,可减少膀胱癌诊断和随访过程中所需的介入性检测。
{"title":"Determination of global DNA methylation level by methylation-sensitive comet assay in patients with urinary bladder cancer.","authors":"Ozer Kocak, Selin Kankaya, Goktug Kalender, Sinharib Citgez, Bulent Onal, Yildiz Dincer","doi":"10.1093/mutage/geae018","DOIUrl":"10.1093/mutage/geae018","url":null,"abstract":"<p><p>DNA methylation is an important mechanism in the regulation of gene expression and maintenance of genomic integrity. Aberrant DNA methylation is an early event in carcinogenesis. DNA methyltransferase inhibitors are used to restore aberrant DNA methylation and inhibit tumor growth. Evaluation of DNA methylation level is important for an effective anti-cancer therapy. In the present study, the determination of global DNA methylation levels in patients with urinary bladder cancer was proposed. The methylation-sensitive comet assay determined the global DNA methylation level at the level of single cells. McrBC enzyme, a methylation-sensitive restriction endonuclease, was used for enzymatic digestion to generate additional breaks at methylated sites. % DNA methylation level was significantly higher in patients with bladder cancer compared to the control group. The clinical performance of % DNA methylation analysis by methylation-sensitive comet assay was evaluated by ROC curve. Using the cutoff value of 6.5% DNA methylation, 92% sensitivity, and 42% specificity were obtained. In conclusion, global DNA methylation measured by methylation-sensitive comet assay may be a promising noninvasive biomarker that reduces interventional tests required in the diagnosis and follow-up of urinary bladder cancer.</p>","PeriodicalId":18889,"journal":{"name":"Mutagenesis","volume":" ","pages":"280-286"},"PeriodicalIF":2.5,"publicationDate":"2024-11-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141913317","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}