Pub Date : 2024-11-01Epub Date: 2024-08-08DOI: 10.1007/s00572-024-01165-5
Qurat Ul Ain, Hafiz Athar Hussain, Qingwen Zhang, Faiza Maqbool, Muhammad Ahmad, Abdul Mateen, Li Zheng, Asma Imran
Rhizospheric interactions among plant roots, arbuscular mycorrhizal fungi, and plant growth-promoting bacteria (PGPB) can enhance plant health by promoting nutrient acquisition and stimulating the plant immune system. This pot experiment, conducted in autoclaved soil, explored the synergistic impacts of the arbuscular mycorrhizal fungus Funneliformis mosseae with four individual bacterial strains, viz.: Cronobacter sp. Rz-7, Serratia sp. 5-D, Pseudomonas sp. ER-20 and Stenotrophomonas sp. RI-4 A on maize growth, root functional traits, root exudates, root colonization, and nutrient uptake. The comprehensive biochemical characterization of these bacterial strains includes assessments of mineral nutrient solubilization, plant hormone production, and drought tolerance. The results showed that all single and interactive treatments of the mycorrhizal fungus and bacterial strains improved maize growth, as compared with the control (no fungus or PGPB). Among single treatments, the application of the mycorrhizal fungus was more effective than the bacterial strains in stimulating maize growth. Within the bacterial treatments, Serratia sp. 5-D and Pseudomonas sp. ER-20 were more effective in enhancing maize growth than Cronobacter sp. Rz-7 and Stenotrophomonas sp. RI-4 A. All bacterial strains were compatible with Funneliformis mosseae to improve root colonization and maize growth. However, the interaction of mycorrhiza and Serratia sp. 5-D (M + 5-D) was the most prominent for maize growth improvement comparatively to all other treatments. We observed that bacterial strains directly enhanced maize growth while indirectly promoting biomass accumulation by facilitating increased mycorrhizal colonization, indicating that these bacteria acted as mycorrhizal helper bacteria.
{"title":"Coordinated influence of Funneliformis mosseae and different plant growth-promoting bacteria on growth, root functional traits, and nutrient acquisition by maize.","authors":"Qurat Ul Ain, Hafiz Athar Hussain, Qingwen Zhang, Faiza Maqbool, Muhammad Ahmad, Abdul Mateen, Li Zheng, Asma Imran","doi":"10.1007/s00572-024-01165-5","DOIUrl":"10.1007/s00572-024-01165-5","url":null,"abstract":"<p><p>Rhizospheric interactions among plant roots, arbuscular mycorrhizal fungi, and plant growth-promoting bacteria (PGPB) can enhance plant health by promoting nutrient acquisition and stimulating the plant immune system. This pot experiment, conducted in autoclaved soil, explored the synergistic impacts of the arbuscular mycorrhizal fungus Funneliformis mosseae with four individual bacterial strains, viz.: Cronobacter sp. Rz-7, Serratia sp. 5-D, Pseudomonas sp. ER-20 and Stenotrophomonas sp. RI-4 A on maize growth, root functional traits, root exudates, root colonization, and nutrient uptake. The comprehensive biochemical characterization of these bacterial strains includes assessments of mineral nutrient solubilization, plant hormone production, and drought tolerance. The results showed that all single and interactive treatments of the mycorrhizal fungus and bacterial strains improved maize growth, as compared with the control (no fungus or PGPB). Among single treatments, the application of the mycorrhizal fungus was more effective than the bacterial strains in stimulating maize growth. Within the bacterial treatments, Serratia sp. 5-D and Pseudomonas sp. ER-20 were more effective in enhancing maize growth than Cronobacter sp. Rz-7 and Stenotrophomonas sp. RI-4 A. All bacterial strains were compatible with Funneliformis mosseae to improve root colonization and maize growth. However, the interaction of mycorrhiza and Serratia sp. 5-D (M + 5-D) was the most prominent for maize growth improvement comparatively to all other treatments. We observed that bacterial strains directly enhanced maize growth while indirectly promoting biomass accumulation by facilitating increased mycorrhizal colonization, indicating that these bacteria acted as mycorrhizal helper bacteria.</p>","PeriodicalId":18965,"journal":{"name":"Mycorrhiza","volume":" ","pages":"477-488"},"PeriodicalIF":3.3,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141902362","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-11-01Epub Date: 2024-10-09DOI: 10.1007/s00572-024-01169-1
Dyonishia J Nieves, Peter B Reich, Artur Stefanski, Raimundo Bermudez, Katilyn V Beidler, Peter G Kennedy
Understanding the responses of ectomycorrhizal (ECM) fungi and their tree hosts to warming and reduced soil water availability under realistic future climate scenarios is essential, yet few studies have investigated how combined global change stressors impact ECM fungal community richness and composition as well as host performance. In this study, we leveraged a long-term factorial warming (ambient, + 1.7 ºC, + 3.2 ºC) and rainfall reduction (ambient, 30% reduced rainfall) experiment in northern Minnesota, USA to investigate the responses of two congeneric hosts with varying drought tolerances and their associated ECM fungal communities to a gradient of soil moisture induced by a combination of warming and rainfall reduction. Soil drying had host-specific effects; the less drought tolerant Pinus strobus had decreased stem growth and lower ECM fungal community richness (fewer ECM fungal Operational Taxonomic Units, OTUs), while the more drought tolerant Pinus banksiana experienced no decline in stem growth but had an altered ECM fungal community composition under drier, warmer soils. Taken together, the results of this study suggest that the combined effects of warming and decreased precipitation will largely be additive in terms of their impact on host performance and ECM fungal community richness, but that drier and warmer soil conditions may also differentially impact specific ECM fungal genera independently of host performance.
{"title":"Ectomycorrhizal fungal community response to warming and rainfall reduction differs between co-occurring temperate-boreal ecotonal Pinus saplings.","authors":"Dyonishia J Nieves, Peter B Reich, Artur Stefanski, Raimundo Bermudez, Katilyn V Beidler, Peter G Kennedy","doi":"10.1007/s00572-024-01169-1","DOIUrl":"10.1007/s00572-024-01169-1","url":null,"abstract":"<p><p>Understanding the responses of ectomycorrhizal (ECM) fungi and their tree hosts to warming and reduced soil water availability under realistic future climate scenarios is essential, yet few studies have investigated how combined global change stressors impact ECM fungal community richness and composition as well as host performance. In this study, we leveraged a long-term factorial warming (ambient, + 1.7 ºC, + 3.2 ºC) and rainfall reduction (ambient, 30% reduced rainfall) experiment in northern Minnesota, USA to investigate the responses of two congeneric hosts with varying drought tolerances and their associated ECM fungal communities to a gradient of soil moisture induced by a combination of warming and rainfall reduction. Soil drying had host-specific effects; the less drought tolerant Pinus strobus had decreased stem growth and lower ECM fungal community richness (fewer ECM fungal Operational Taxonomic Units, OTUs), while the more drought tolerant Pinus banksiana experienced no decline in stem growth but had an altered ECM fungal community composition under drier, warmer soils. Taken together, the results of this study suggest that the combined effects of warming and decreased precipitation will largely be additive in terms of their impact on host performance and ECM fungal community richness, but that drier and warmer soil conditions may also differentially impact specific ECM fungal genera independently of host performance.</p>","PeriodicalId":18965,"journal":{"name":"Mycorrhiza","volume":" ","pages":"403-416"},"PeriodicalIF":3.3,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142391929","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-11-01Epub Date: 2024-10-21DOI: 10.1007/s00572-024-01171-7
Eve Hellequin, Philippe Rech, Rémi Petrolli, Marc-André Selosse, Hippolyte Kodja, Bérénice Piquet, Florent Martos
The mycorrhizal fungi of cultivated Vanilla spp. have mainly been studied in America, while a recent study has investigated them on Réunion Island (Indian Ocean). However, there are many different types of cultivation on Réunion, from shade-house crops to forest farms of endemic or exotic trees. Here we fill a gap in the study of the root mycobiome of Vanilla by sampling vines in forest plantations on recent lava flows in the southeast of Réunion. Specifically, we aimed to characterize the fungal communities between terrestrial and epiphytic roots, between forest farms that differ mainly in the species of trees, and between Vanilla roots and ECM-like roots of nearby trees. By sequencing fungal ITS2, we showed that the Vanilla root mycobiome is diverse and differed between the root types and forest farms. Epiphytic and terrestrial roots host endophytic fungi, while a putative rust with visible urediniospores was abundant in terrestrial roots mainly. Other pathogens were detected in epiphytic roots (Colletotrichum) with no sign of disease. Following sequencing and electron microscopy, Tulasnellaceae, characterized by imperforate parenthesomes and cell wall expansion with an amorphous matrix, were shown to be the main mycorrhizal fungi in both vanilla root types. Interestingly, the dominant Tulasnellaceae OTU was found in ECM-type roots of trees belonging to the ectomycorrhizal family Sapotaceae. Further observations are needed to confirm the ectomycorrhizal association of endemic trees with Tulasnella. Moreover, labeling experiments will be instrumental in investigating the transfer of nutrients between the trees and the Vanilla through the network of mycorrhizal associations in the soil.
{"title":"Variations in the root mycobiome and mycorrhizal fungi between different types of Vanilla forest farms on Réunion Island.","authors":"Eve Hellequin, Philippe Rech, Rémi Petrolli, Marc-André Selosse, Hippolyte Kodja, Bérénice Piquet, Florent Martos","doi":"10.1007/s00572-024-01171-7","DOIUrl":"10.1007/s00572-024-01171-7","url":null,"abstract":"<p><p>The mycorrhizal fungi of cultivated Vanilla spp. have mainly been studied in America, while a recent study has investigated them on Réunion Island (Indian Ocean). However, there are many different types of cultivation on Réunion, from shade-house crops to forest farms of endemic or exotic trees. Here we fill a gap in the study of the root mycobiome of Vanilla by sampling vines in forest plantations on recent lava flows in the southeast of Réunion. Specifically, we aimed to characterize the fungal communities between terrestrial and epiphytic roots, between forest farms that differ mainly in the species of trees, and between Vanilla roots and ECM-like roots of nearby trees. By sequencing fungal ITS2, we showed that the Vanilla root mycobiome is diverse and differed between the root types and forest farms. Epiphytic and terrestrial roots host endophytic fungi, while a putative rust with visible urediniospores was abundant in terrestrial roots mainly. Other pathogens were detected in epiphytic roots (Colletotrichum) with no sign of disease. Following sequencing and electron microscopy, Tulasnellaceae, characterized by imperforate parenthesomes and cell wall expansion with an amorphous matrix, were shown to be the main mycorrhizal fungi in both vanilla root types. Interestingly, the dominant Tulasnellaceae OTU was found in ECM-type roots of trees belonging to the ectomycorrhizal family Sapotaceae. Further observations are needed to confirm the ectomycorrhizal association of endemic trees with Tulasnella. Moreover, labeling experiments will be instrumental in investigating the transfer of nutrients between the trees and the Vanilla through the network of mycorrhizal associations in the soil.</p>","PeriodicalId":18965,"journal":{"name":"Mycorrhiza","volume":" ","pages":"429-446"},"PeriodicalIF":3.3,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142470366","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-11-01Epub Date: 2024-10-10DOI: 10.1007/s00572-024-01164-6
Huina Zhang, Yan Xiao
Soil nutrients exhibit heterogeneity in their spatial distribution, presenting challenges to plant acquisition. Notably, phosphorus (P) heterogeneity is a characteristic feature of soil, necessitating the development of adaptive strategies by plants to cope with this phenomenon. To address this, fully crossed three-factor experiments were conducted using red clover within rhizoboxes. Positions of P in three conditions, included P even distribution (even P), P close distribution (close P), and P far distribution (far P). Concurrently, N addition was two amounts(0 and 20 mg kg- 1), both with and without AMF inoculation. The findings indicated a decrease in aboveground biomass attributable to uneven P distribution, whereas N and AMF demonstrated the potential to affect aboveground biomass. In a structural equation model, AMF primarily increased aboveground biomass by enhancing nodule number and specific leaf area (SLA). In contrast, N addition improved aboveground biomass through increased nodule number or direct effects. Subsequently, a random forest model indicated that under the far P treatment, fine root length emerged as the primary factor affecting aboveground biomass, followed by thickest root length. Conversely, in the even P treatment, the thickest root length was of paramount importance. In summary, when confronted with uneven P distribution, clover plants adopted various root foraging strategies. AMF played a pivotal role in elevating nodule number, and SLA.
土壤养分的空间分布具有异质性,这给植物获取养分带来了挑战。值得注意的是,磷(P)的异质性是土壤的一个特征,这就要求植物发展适应性策略来应对这一现象。为了解决这个问题,我们使用根瘤菌中的红三叶草进行了完全交叉的三因素实验。在三种条件下,P 的位置包括 P 的均匀分布(均匀 P)、P 的接近分布(接近 P)和 P 的远距离分布(远距离 P)。同时,在接种和不接种 AMF 的情况下,氮的添加量为两种(0 和 20 毫克/千克-1)。研究结果表明,P 分布不均导致地上部生物量减少,而氮和 AMF 则显示出影响地上部生物量的潜力。在结构方程模型中,AMF 主要通过增加结核数量和比叶面积(SLA)来提高地上生物量。相比之下,氮的添加通过增加结核数量或直接影响来提高地上生物量。随后,随机森林模型表明,在远 P 处理下,细根长度是影响地上生物量的主要因素,其次是最粗根长度。相反,在匀磷处理中,最粗根的长度最为重要。总之,面对不均匀的 P 分布,三叶草植物采取了不同的根觅食策略。AMF 在提高结核数量和 SLA 方面发挥了关键作用。
{"title":"Contribution of mycorrhizal symbiosis and root strategy to red clover aboveground biomass under nitrogen addition and phosphorus distribution.","authors":"Huina Zhang, Yan Xiao","doi":"10.1007/s00572-024-01164-6","DOIUrl":"10.1007/s00572-024-01164-6","url":null,"abstract":"<p><p>Soil nutrients exhibit heterogeneity in their spatial distribution, presenting challenges to plant acquisition. Notably, phosphorus (P) heterogeneity is a characteristic feature of soil, necessitating the development of adaptive strategies by plants to cope with this phenomenon. To address this, fully crossed three-factor experiments were conducted using red clover within rhizoboxes. Positions of P in three conditions, included P even distribution (even P), P close distribution (close P), and P far distribution (far P). Concurrently, N addition was two amounts(0 and 20 mg kg<sup>- 1</sup>), both with and without AMF inoculation. The findings indicated a decrease in aboveground biomass attributable to uneven P distribution, whereas N and AMF demonstrated the potential to affect aboveground biomass. In a structural equation model, AMF primarily increased aboveground biomass by enhancing nodule number and specific leaf area (SLA). In contrast, N addition improved aboveground biomass through increased nodule number or direct effects. Subsequently, a random forest model indicated that under the far P treatment, fine root length emerged as the primary factor affecting aboveground biomass, followed by thickest root length. Conversely, in the even P treatment, the thickest root length was of paramount importance. In summary, when confronted with uneven P distribution, clover plants adopted various root foraging strategies. AMF played a pivotal role in elevating nodule number, and SLA.</p>","PeriodicalId":18965,"journal":{"name":"Mycorrhiza","volume":" ","pages":"489-502"},"PeriodicalIF":3.3,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142400793","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-11-01Epub Date: 2024-10-26DOI: 10.1007/s00572-024-01172-6
Marcos V Caiafa, Paulo H Grazziotti, Elena Karlsen-Ayala, Michelle A Jusino, Rosanne Healy, Nicole K Reynolds, W Mark Whitten, Matthew E Smith
Cistaceae are shrubs, subshrubs and herbs that often occur in stressful, fire-prone or disturbed environments and form ectomycorrhizal (ECM) associations with symbiotic fungi. Although some Cistaceae are long-lived shrubs that grow to significant size, others are herbaceous annuals or short-lived plants. Thus, Cistaceae are atypical ECM hosts that are fundamentally different in their biology from trees that are the more typically studied ECM hosts. The Mediterranean region is the center of diversity for Cistaceae and the ectomycorrhizal fungi associated with Cistaceae hosts have primarily been studied in Europe, North Africa, and the Middle East. Mediterranean Cistaceae often host diverse communities of ECM fungi, but they also act as hosts for some ECM fungi that putatively show host-specificity or strong host preference for Cistaceae (including species of Delastria, Hebeloma, Terfezia, and Tirmania). The ECM associations of Cistaceae in North America, however, remain highly understudied. Here we use fungal DNA metabarcoding to document the ectomycorrhizal fungal communities associated with Crocanthemum and Lechea (Cistaceae) in open, fire-prone sandhill habitats in north Florida. At each site we also sampled nearby Pinus to determine whether small, herbaceous Cistaceae have specialized ECM fungi or whether they share their ECM fungal community with nearby pines. The ECM communities of Florida Cistaceae are dominated by Cenococcum (Ascomycota) and Russula (Basidiomycota) species but were also significantly associated with Delastria, an understudied genus of mostly truffle-like Pezizales (Ascomycota). Although many Cistaceae ECM fungi were shared with neighboring pines, the ECM communities with Cistaceae were nonetheless significantly different than those of pines.
{"title":"Ectomycorrhizal fungal communities associated with Crocanthemum and Lechea (Cistaceae) in subtropical Florida sandhill habitats.","authors":"Marcos V Caiafa, Paulo H Grazziotti, Elena Karlsen-Ayala, Michelle A Jusino, Rosanne Healy, Nicole K Reynolds, W Mark Whitten, Matthew E Smith","doi":"10.1007/s00572-024-01172-6","DOIUrl":"10.1007/s00572-024-01172-6","url":null,"abstract":"<p><p>Cistaceae are shrubs, subshrubs and herbs that often occur in stressful, fire-prone or disturbed environments and form ectomycorrhizal (ECM) associations with symbiotic fungi. Although some Cistaceae are long-lived shrubs that grow to significant size, others are herbaceous annuals or short-lived plants. Thus, Cistaceae are atypical ECM hosts that are fundamentally different in their biology from trees that are the more typically studied ECM hosts. The Mediterranean region is the center of diversity for Cistaceae and the ectomycorrhizal fungi associated with Cistaceae hosts have primarily been studied in Europe, North Africa, and the Middle East. Mediterranean Cistaceae often host diverse communities of ECM fungi, but they also act as hosts for some ECM fungi that putatively show host-specificity or strong host preference for Cistaceae (including species of Delastria, Hebeloma, Terfezia, and Tirmania). The ECM associations of Cistaceae in North America, however, remain highly understudied. Here we use fungal DNA metabarcoding to document the ectomycorrhizal fungal communities associated with Crocanthemum and Lechea (Cistaceae) in open, fire-prone sandhill habitats in north Florida. At each site we also sampled nearby Pinus to determine whether small, herbaceous Cistaceae have specialized ECM fungi or whether they share their ECM fungal community with nearby pines. The ECM communities of Florida Cistaceae are dominated by Cenococcum (Ascomycota) and Russula (Basidiomycota) species but were also significantly associated with Delastria, an understudied genus of mostly truffle-like Pezizales (Ascomycota). Although many Cistaceae ECM fungi were shared with neighboring pines, the ECM communities with Cistaceae were nonetheless significantly different than those of pines.</p>","PeriodicalId":18965,"journal":{"name":"Mycorrhiza","volume":" ","pages":"391-401"},"PeriodicalIF":3.3,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142504371","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-11-01DOI: 10.1007/s00572-024-01173-5
Daquan Sun, Martin Rozmoš, Vasilis Kokkoris, Michala Kotianová, Hana Hršelová, Petra Bukovská, Maede Faghihinia, Jan Jansa
{"title":"Correction: Unraveling the diversity of hyphal explorative traits among Rhizophagus irregularis genotypes.","authors":"Daquan Sun, Martin Rozmoš, Vasilis Kokkoris, Michala Kotianová, Hana Hršelová, Petra Bukovská, Maede Faghihinia, Jan Jansa","doi":"10.1007/s00572-024-01173-5","DOIUrl":"10.1007/s00572-024-01173-5","url":null,"abstract":"","PeriodicalId":18965,"journal":{"name":"Mycorrhiza","volume":" ","pages":"529"},"PeriodicalIF":3.3,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11604733/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142624212","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-11-01Epub Date: 2024-09-09DOI: 10.1007/s00572-024-01167-3
Changfeng Zhang, Stefan Geisen, Roeland L Berendsen, Marcel G A van der Heijden
Arbuscular mycorrhizal (AM) fungi not only play a crucial role in acquiring nutrients for plants but also serve as a habitat for soil microbes. Recent studies observed that AM fungal hyphae are colonized by specific bacterial communities. However, so far it has not been explored whether fungal hyphae and mycorrhizal networks also harbor specific communities of protists, a key group of microbes in the soil microbiome. Here, we characterized protist communities in soil in a compartment with plant roots and on hyphae collected from hyphal compartments without plant roots. We detected specific protist communities on fungal hyphae. Fourteen protistan amplicon sequences variants (ASVs) were significantly associated with fungal hyphae, half of which belonged to the Cercozoa group. This research, for the first-time detected specific protist ASVs directly associated with abundant AM fungus hyphae, highlighting the complexity of the hyphal food web.
{"title":"Specialized protist communities on mycorrhizal fungal hyphae.","authors":"Changfeng Zhang, Stefan Geisen, Roeland L Berendsen, Marcel G A van der Heijden","doi":"10.1007/s00572-024-01167-3","DOIUrl":"10.1007/s00572-024-01167-3","url":null,"abstract":"<p><p>Arbuscular mycorrhizal (AM) fungi not only play a crucial role in acquiring nutrients for plants but also serve as a habitat for soil microbes. Recent studies observed that AM fungal hyphae are colonized by specific bacterial communities. However, so far it has not been explored whether fungal hyphae and mycorrhizal networks also harbor specific communities of protists, a key group of microbes in the soil microbiome. Here, we characterized protist communities in soil in a compartment with plant roots and on hyphae collected from hyphal compartments without plant roots. We detected specific protist communities on fungal hyphae. Fourteen protistan amplicon sequences variants (ASVs) were significantly associated with fungal hyphae, half of which belonged to the Cercozoa group. This research, for the first-time detected specific protist ASVs directly associated with abundant AM fungus hyphae, highlighting the complexity of the hyphal food web.</p>","PeriodicalId":18965,"journal":{"name":"Mycorrhiza","volume":" ","pages":"517-524"},"PeriodicalIF":3.3,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11604758/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142154607","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-11-01Epub Date: 2024-07-29DOI: 10.1007/s00572-024-01161-9
Martin Vohník, Jiřina Josefiová
Symbioses with fungi are important and ubiquitous on dry land but underexplored in the sea. As yet only one seagrass has been shown to form a specific root-fungus symbiosis that resembles those occurring in terrestrial plants, namely the dominant long-lived Mediterranean species Posidonia oceanica (Alismatales: Posidoniaceae) forming a dark septate (DS) endophytic association with the ascomycete Posidoniomyces atricolor (Pleosporales: Aigialaceae). Using stereomicroscopy, light and scanning electron microscopy, and DNA cloning, here we describe a novel root-fungus symbiosis in the Indo-Pacific seagrass Thalassodendron ciliatum (Alismatales: Cymodoceaceae) from a site in the Gulf of Aqaba in the Red Sea. Similarly to P. oceanica, the mycobiont of T. ciliatum occurs more frequently in thinner roots that engage in nutrient uptake from the seabed and forms extensive hyphal mantles composed of DS hyphae on the root surface. Contrary to P. oceanica, the mycobiont occurs on the roots with root hairs and does not colonize its host intraradically. While the cloning revealed a relatively rich spectrum of fungi, they were mostly parasites or saprobes of uncertain origin and the identity of the mycobiont thus remains unknown. Symbioses of seagrasses with fungi are probably more frequent than previously thought, but their functioning and significance are unknown. Melanin present in DS hyphae slows down their decomposition and so is true for the colonized roots. DS fungi may in this way conserve organic detritus in the seagrasses' rhizosphere, thus contributing to blue carbon sequestration in seagrass meadows.
与真菌的共生关系在旱地上非常重要且无处不在,但在海洋中却未得到充分探索。迄今为止,只有一种海草与真菌形成了类似于陆生植物的特殊根-真菌共生关系,即地中海的主要长寿物种 Posidonia oceanica(Alismatales: Posidoniaceae)与子囊菌 Posidoniomyces atricolor(Pleosporales: Aigialaceae)形成了暗隔(DS)内生关系。利用立体显微镜、光镜和扫描电子显微镜以及 DNA 克隆技术,我们在此描述了红海亚喀巴湾印度太平洋海草 Thalassodendron ciliatum(Alismatales: Cymodoceaceae)的一种新型根-真菌共生关系。与 P. oceanica 类似,T. ciliatum 的分生菌体更多出现在从海床吸收营养的较细根部,并在根部表面形成由 DS 菌丝组成的广泛的菌套。与 P. oceanica 不同的是,分生孢子体随根毛出现在根部,不会在宿主体内定殖。虽然克隆揭示了相对丰富的真菌谱系,但它们大多是寄生菌或来源不明的汁液菌,因此霉菌的身份仍然不明。海草与真菌的共生可能比以前想象的更为频繁,但其功能和意义尚不清楚。海草菌丝中的黑色素会减缓海草的分解,定殖根也是如此。DS 真菌可能会以这种方式保护海草根圈中的有机碎屑,从而促进海草草甸的蓝碳固存。
{"title":"Novel epiphytic root-fungus symbiosis in the Indo-Pacific seagrass Thalassodendron ciliatum from the Red Sea.","authors":"Martin Vohník, Jiřina Josefiová","doi":"10.1007/s00572-024-01161-9","DOIUrl":"10.1007/s00572-024-01161-9","url":null,"abstract":"<p><p>Symbioses with fungi are important and ubiquitous on dry land but underexplored in the sea. As yet only one seagrass has been shown to form a specific root-fungus symbiosis that resembles those occurring in terrestrial plants, namely the dominant long-lived Mediterranean species Posidonia oceanica (Alismatales: Posidoniaceae) forming a dark septate (DS) endophytic association with the ascomycete Posidoniomyces atricolor (Pleosporales: Aigialaceae). Using stereomicroscopy, light and scanning electron microscopy, and DNA cloning, here we describe a novel root-fungus symbiosis in the Indo-Pacific seagrass Thalassodendron ciliatum (Alismatales: Cymodoceaceae) from a site in the Gulf of Aqaba in the Red Sea. Similarly to P. oceanica, the mycobiont of T. ciliatum occurs more frequently in thinner roots that engage in nutrient uptake from the seabed and forms extensive hyphal mantles composed of DS hyphae on the root surface. Contrary to P. oceanica, the mycobiont occurs on the roots with root hairs and does not colonize its host intraradically. While the cloning revealed a relatively rich spectrum of fungi, they were mostly parasites or saprobes of uncertain origin and the identity of the mycobiont thus remains unknown. Symbioses of seagrasses with fungi are probably more frequent than previously thought, but their functioning and significance are unknown. Melanin present in DS hyphae slows down their decomposition and so is true for the colonized roots. DS fungi may in this way conserve organic detritus in the seagrasses' rhizosphere, thus contributing to blue carbon sequestration in seagrass meadows.</p>","PeriodicalId":18965,"journal":{"name":"Mycorrhiza","volume":" ","pages":"447-461"},"PeriodicalIF":3.3,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11604718/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141788665","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-18DOI: 10.1007/s00572-024-01168-2
Jacob R. Hopkins, James D. Bever
Microbial community assembly involves a series of ecological filtering mechanisms that determine the composition of microbial communities. While the importance of both broad and local level factors on microbial communities has been reasonably well studied, this work often is limited to single observations and neglects to consider how communities change over time (i.e., seasonal variation). Because seasonal variation is an important determinant of community assembly and determines the relative importance of community assembly filters, this represents a key knowledge gap. Due to their close associations with seasonal variation in plant growth and fitness, arbuscular mycorrhizal (AM) fungi are useful groups for assessing the importance of seasonal dynamics in microbial community assembly. We tested how seasonal variation (spring vs. summer), plant life history stage (vegetative vs. flowering), and host plant species (Baptisia bracteata var. leucophaea & Andropogon gerardii) influenced AM fungal spore community assembly. AM fungal spore community temporal dynamics were closely linked to plant host species and life history stage. While AM fungal spore communities demonstrated strong turnover between the spring (e.g., higher sporulation) and late summer (e.g., higher diversity), the strength and direction of these changes was modified by host plant species. Here we demonstrate the importance of considering temporal variation in microbial community assembly, and also show how plant-microbe interactions can modify seasonal trends in microbial community dynamics.
微生物群落的组合涉及一系列决定微生物群落组成的生态过滤机制。虽然广泛和局部因素对微生物群落的重要性已经得到了相当充分的研究,但这些工作往往局限于单次观测,而忽略了群落如何随时间变化(即季节变化)。由于季节变化是群落组合的重要决定因素,并决定了群落组合过滤器的相对重要性,因此这是一个关键的知识空白。由于丛枝菌根(AM)真菌与植物生长和适应性的季节变化密切相关,因此它们是评估微生物群落组装中季节动态重要性的有用群体。我们测试了季节变化(春季与夏季)、植物生命史阶段(无性生长与开花)和寄主植物种类(Baptisia bracteata var. leucophaea & Andropogon gerardii)对 AM 真菌孢子群落组合的影响。AM 真菌孢子群落的时间动态与植物寄主种类和生活史阶段密切相关。虽然AM真菌孢子群落在春季(如孢子数量较多)和夏末(如多样性较高)之间表现出很强的更替性,但这些变化的强度和方向受寄主植物种类的影响。在此,我们证明了考虑微生物群落组合的时间变化的重要性,同时也说明了植物与微生物之间的相互作用如何改变微生物群落动态的季节性趋势。
{"title":"Arbuscular mycorrhizal fungal spore communities and co-occurrence networks demonstrate host-specific variation throughout the growing season","authors":"Jacob R. Hopkins, James D. Bever","doi":"10.1007/s00572-024-01168-2","DOIUrl":"https://doi.org/10.1007/s00572-024-01168-2","url":null,"abstract":"<p>Microbial community assembly involves a series of ecological filtering mechanisms that determine the composition of microbial communities. While the importance of both broad and local level factors on microbial communities has been reasonably well studied, this work often is limited to single observations and neglects to consider how communities change over time (i.e., seasonal variation). Because seasonal variation is an important determinant of community assembly and determines the relative importance of community assembly filters, this represents a key knowledge gap. Due to their close associations with seasonal variation in plant growth and fitness, arbuscular mycorrhizal (AM) fungi are useful groups for assessing the importance of seasonal dynamics in microbial community assembly. We tested how seasonal variation (spring vs. summer), plant life history stage (vegetative vs. flowering), and host plant species (<i>Baptisia bracteata</i> var. leucophaea & <i>Andropogon gerardii</i>) influenced AM fungal spore community assembly. AM fungal spore community temporal dynamics were closely linked to plant host species and life history stage. While AM fungal spore communities demonstrated strong turnover between the spring (e.g., higher sporulation) and late summer (e.g., higher diversity), the strength and direction of these changes was modified by host plant species. Here we demonstrate the importance of considering temporal variation in microbial community assembly, and also show how plant-microbe interactions can modify seasonal trends in microbial community dynamics.</p>","PeriodicalId":18965,"journal":{"name":"Mycorrhiza","volume":"23 1","pages":""},"PeriodicalIF":3.9,"publicationDate":"2024-09-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142260726","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-11DOI: 10.1007/s00572-024-01166-4
Bérengère Bastogne, Catherine Buysens, Nicolas Schtickzelle, Ismahen Lalaymia, Stéphane Declerck
Arbuscular mycorrhizal fungi (AMF) are totally dependent on a suitable host plant for their carbon resources. Here, we investigated under in vitro conditions, the impact of defoliation practices, i.e., mechanical defoliation or chemical defoliation with a contact herbicide (Reglone®, containing the active ingredient diquat) or systemic herbicide (RoundUp®, containing the active ingredient glyphosate), on the dynamics of spore production of Rhizophagus irregularis and Rhizophagus intraradices associated with Solanum tuberosum and/or Medicago truncatula. Glyphosate affected the spore production rate more rapidly and severely than diquat or mechanical defoliation. We hypothesize that this effect was related to disruption of the C metabolism in the whole plant combined with a possible direct effect of glyphosate on the fungus within the roots and/or perhaps in soil via the release of this active ingredient from decaying roots. No glyphosate could be detected in the roots due to technical constraints, while its release from the roots in the medium corresponded to 0.11% of the active ingredient applied to the leaves. The three defoliation practices strongly affected root colonization, compared to the non-defoliated plants. However, the amount of glyphosate released into the medium did not affect spore germination and germ tube growth. These results suggest that the effects of defoliation on the dynamics of spore production are mainly indirect via an impact on the plant, and that the effect is faster and more marked with the glyphosate-formulation, possibly via a direct effect on the fungus in the roots and more unlikely on spore germination.
{"title":"The systemic herbicide glyphosate affects the sporulation dynamics of Rhizophagus species more severely than mechanical defoliation or the contact herbicide diquat","authors":"Bérengère Bastogne, Catherine Buysens, Nicolas Schtickzelle, Ismahen Lalaymia, Stéphane Declerck","doi":"10.1007/s00572-024-01166-4","DOIUrl":"https://doi.org/10.1007/s00572-024-01166-4","url":null,"abstract":"<p>Arbuscular mycorrhizal fungi (AMF) are totally dependent on a suitable host plant for their carbon resources. Here, we investigated under in vitro conditions, the impact of defoliation practices, i.e., mechanical defoliation or chemical defoliation with a contact herbicide (Reglone®, containing the active ingredient diquat) or systemic herbicide (RoundUp®, containing the active ingredient glyphosate), on the dynamics of spore production of <i>Rhizophagus irregularis</i> and <i>Rhizophagus intraradices</i> associated with <i>Solanum tuberosum</i> and/or <i>Medicago truncatula</i>. Glyphosate affected the spore production rate more rapidly and severely than diquat or mechanical defoliation. We hypothesize that this effect was related to disruption of the C metabolism in the whole plant combined with a possible direct effect of glyphosate on the fungus within the roots and/or perhaps in soil via the release of this active ingredient from decaying roots. No glyphosate could be detected in the roots due to technical constraints, while its release from the roots in the medium corresponded to 0.11% of the active ingredient applied to the leaves. The three defoliation practices strongly affected root colonization, compared to the non-defoliated plants. However, the amount of glyphosate released into the medium did not affect spore germination and germ tube growth. These results suggest that the effects of defoliation on the dynamics of spore production are mainly indirect via an impact on the plant, and that the effect is faster and more marked with the glyphosate-formulation, possibly via a direct effect on the fungus in the roots and more unlikely on spore germination.</p>","PeriodicalId":18965,"journal":{"name":"Mycorrhiza","volume":"5 1","pages":""},"PeriodicalIF":3.9,"publicationDate":"2024-09-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142175871","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}