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Altered tRNA expression profile associated with codon-specific proteomic changes in the suicide brain 与自杀大脑中密码子特异性蛋白质组变化相关的 tRNA 表达谱改变
IF 11 1区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-01-14 DOI: 10.1038/s41380-025-02891-8
J. Blaze, S. Chen, S. Heissel, H. Alwaseem, M. P. Landinez Macias, C. Peter, H. Molina, E. Storkebaum, G. Turecki, H. Goodarzi, S. Akbarian

Suicide is a major public health concern, and the number of deaths by suicide has been increasing in recent years in the US. There are various biological risk factors for suicide, but causal molecular mechanisms remain unknown, suggesting that investigation of novel mechanisms and integrative approaches are necessary. Transfer (t)RNAs and their modifications, including cytosine methylation (m5C), have received little attention regarding their role in normal or diseased brain function, though they are dynamic mediators of protein synthesis. tRNA regulation is highly interconnected with proteomic and metabolomic outcomes, suggesting that investigating these multiple levels of molecular regulation together may elucidate more information on neural function and suicide risk. In the current study, we used an integrative ‘omics’ approach to probe tRNA dysregulation, including tRNA expression and tRNA m5C, proteomics, and amino acid metabolomics in prefrontal cortex from 98 subjects who died by suicide during an episode of major depressive disorder (MDD) and neurotypical controls. While no changes were detected in amino acid content, results showed increased tRNAGlyGCC expression in the suicide brain that is not driven by changes in m5C. Proteomics revealed increased expression of proteins with high glycine codon GGC content, demonstrating a strong association between isoacceptor-specific tRNA expression and proteomic outcomes in the suicide brain, which is in line with previous work linking tRNAGly with alterations in glycine-rich proteins in a translational rodent model of depression. Further, we confirmed using a rodent model that tRNAGlyGCC overexpression was sufficient to increase the expression of proteins with high glycine codon GGC content that were upregulated in the suicide brain. By characterizing the effects of MDD-suicide in human PFC tissue, we now begin to elucidate a novel molecular signature with downstream consequences for psychiatric outcomes.

自杀是一个重大的公共卫生问题,近年来美国因自杀死亡的人数不断增加。自杀有多种生物学风险因素,但其分子机制仍然未知,这表明有必要研究新的机制和综合方法。转运(t)RNA及其修饰(包括胞嘧啶甲基化(m5C))在正常或患病大脑功能中的作用很少受到关注,尽管它们是蛋白质合成的动态介质。tRNA的调控与蛋白质组和代谢组的结果高度关联,这表明对这些多层次分子调控的共同研究可能会阐明更多有关神经功能和自杀风险的信息。在目前的研究中,我们采用了一种综合性的 "全息 "方法来探究 tRNA 失调,包括 98 名在重度抑郁障碍(MDD)发作期间自杀身亡的受试者和神经典型对照组的前额叶皮质中 tRNA 表达和 tRNA m5C、蛋白质组学和氨基酸代谢组学。虽然没有检测到氨基酸含量的变化,但结果显示自杀者大脑中 tRNAGlyGCC 的表达增加,而这并不是由 m5C 的变化引起的。蛋白质组学显示,甘氨酸密码子 GGC 含量高的蛋白质表达增加,这表明自杀脑中等位受体特异性 tRNA 的表达与蛋白质组学结果之间存在密切联系,这与之前在抑郁症啮齿动物转化模型中将 tRNAGly 与富含甘氨酸蛋白质的改变联系起来的研究结果一致。此外,我们还利用啮齿动物模型证实,tRNAGlyGCC 的过表达足以增加自杀脑中富含甘氨酸密码子 GGC 的蛋白质的表达,而这些蛋白质在自杀脑中是上调的。通过描述 MDD 自杀对人类 PFC 组织的影响,我们现在开始阐明一种新的分子特征,它对精神疾病的后果具有下游影响。
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引用次数: 0
Anorexia nervosa is associated with higher brain mu-opioid receptor availability 神经性厌食症与较高的脑阿片受体可用性有关
IF 11 1区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-01-12 DOI: 10.1038/s41380-025-02888-3
Kyoungjune Pak, Jouni Tuisku, Henry K. Karlsson, Jussi Hirvonen, Eleni Rebelos, Laura Pekkarinen, Lihua Sun, Aino Latva-Rasku, Semi Helin, Johan Rajander, Max Karukivi, Pirjo Nuutila, Lauri Nummenmaa

Anorexia nervosa (AN) is a severe psychiatric disorder, characterized by restricted eating, fear to gain weight, and a distorted body image. Mu-opioid receptor (MOR) functions as a part of complex opioid system and supports both homeostatic and hedonic control of eating behavior. Thirteen patients with AN and thirteen healthy controls (HC) were included in this study. We measured (1) MOR availability with [11C]carfentanil positron emission tomography (PET), (2) brain glucose uptake (BGU) with 2-deoxy-2[18F]fluoro-D-glucose ([18F]FDG) PET during hyperinsulinemic-euglycemic clamp and (3) blood-oxygen-level-dependent signal with functional magnetic resonance imaging. All subjects underwent a screening visit consisting of physical examination, anthropometric measurements, fasting blood samples, an oral glucose tolerance test, psychiatric assessment, and an inquiry regarding medical history. Body fat mass (%) was measured and M value was calculated. MOR availability from caudate and putamen was higher in patients with AN and those from nucleus accumbens (NAcc) and thalamus showed the higher trend in patients with AN. There was no area where MOR availability was lower in patients with AN. BGU was not different between AN and HC. MOR availability and BGU were negatively correlated in caudate, NAcc and thalamus and showed the trend of negative association in putamen. In conclusion, AN is associated with higher MOR availability in the brain regions implicated in reward processing, while BGU remains unaltered. Therefore, the endogenous opioid system might be one of the key components underlying AN. This better understanding of AN could support the development of new treatments for AN.

神经性厌食症(AN)是一种严重的精神疾病,其特征是限制饮食,害怕体重增加,以及扭曲的身体形象。阿片受体(Mu-opioid receptor, MOR)作为复杂阿片系统的一部分,支持进食行为的内稳态和享乐控制。本研究纳入13例AN患者和13例健康对照(HC)。我们用[11C]卡芬太尼正电子发射断层扫描(PET)测量了(1)MOR可用性,(2)在高胰岛素-正血糖钳夹期间用2-脱氧-2[18F]氟-d -葡萄糖([18F]FDG) PET测量了脑葡萄糖摄取(BGU),(3)用功能磁共振成像测量了血氧水平依赖的信号。所有受试者接受了筛查访问,包括体格检查、人体测量、空腹血液样本、口服葡萄糖耐量试验、精神评估和病史询问。测定体脂量(%),计算M值。AN患者尾状核和壳核的MOR可用性较高,而AN患者伏隔核和丘脑的MOR可用性较高。在AN患者中,没有哪个区域的MOR可用性更低。与HC间BGU差异无统计学意义。MOR有效性与BGU在尾状体、NAcc和丘脑呈负相关,在壳核呈负相关趋势。综上所述,AN与大脑中涉及奖励处理的区域中更高的MOR可用性有关,而BGU则保持不变。因此,内源性阿片系统可能是AN的关键组成部分之一。更好地了解AN可以支持AN的新治疗方法的开发。
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引用次数: 0
Medication use is associated with distinct microbial features in anxiety and depression 药物使用与焦虑和抑郁中不同的微生物特征有关
IF 11 1区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-01-10 DOI: 10.1038/s41380-024-02857-2
Amanda Hazel Dilmore, Rayus Kuplicki, Daniel McDonald, Megha Kumar, Mehrbod Estaki, Nicholas Youngblut, Alexander Tyakht, Gail Ackermann, Colette Blach, Siamak MahmoudianDehkordi, Boadie W. Dunlop, Sudeepa Bhattacharyya, Salvador Guinjoan, Pooja Mandaviya, Ruth E. Ley, Rima Kaddaruh-Dauok, Martin P. Paulus, Rob Knight

This study investigated the relationship between gut microbiota and neuropsychiatric disorders (NPDs), specifically anxiety disorder (ANXD) and/or major depressive disorder (MDD), as defined by Diagnostic and Statistical Manual of Mental Disorders (DSM)-IV or V criteria. The study also examined the influence of medication use, particularly antidepressants and/or anxiolytics, classified through the Anatomical Therapeutic Chemical (ATC) Classification System, on the gut microbiota. Both 16S rRNA gene amplicon sequencing (16S) and shallow shotgun sequencing (WGS) were performed on DNA extracted from 666 fecal samples from the Tulsa-1000 and Neurocomputational Mechanisms of Affiliation and Personality Study Center for Biomedical Research Excellence (NeuroMAP CoBRE) cohorts. The results highlight the significant influence of medication use; antidepressant use is associated with significant differences in gut microbiota beta diversity and has a larger effect size than NPD diagnosis. Next, specific microbes were associated with ANXD and MDD, highlighting their potential for non-pharmacological intervention. Finally, the study demonstrated the capability of Random Forest classifiers to predict diagnoses of NPD and medication use from microbial profiles, suggesting a promising direction for the use of gut microbiota as biomarkers for NPD. Though the effect sizes were larger in females than males, similar trends emerged for both sexes. These findings encourage future research on the gut microbiota’s role in NPD and its interactions with pharmacological treatments.

本研究调查了肠道微生物群与神经精神疾病(npd)之间的关系,特别是焦虑症(ANXD)和/或重度抑郁症(MDD),根据精神疾病诊断与统计手册(DSM)-IV或V标准定义。该研究还检查了药物使用的影响,特别是抗抑郁药和/或抗焦虑药,通过解剖治疗化学(ATC)分类系统分类,对肠道微生物群的影响。采用16S rRNA基因扩增子测序(16S)和浅层霰弹枪测序(WGS)对来自Tulsa-1000和生物医学研究卓越性研究中心(NeuroMAP CoBRE)队列的666份粪便样本的DNA进行提取。结果显示,药物使用的显著影响;抗抑郁药的使用与肠道微生物群多样性的显著差异相关,并且比NPD诊断具有更大的效应量。接下来,特定的微生物与ANXD和MDD相关,强调了它们在非药物干预方面的潜力。最后,该研究证明了随机森林分类器能够从微生物谱中预测NPD的诊断和药物使用,这为使用肠道微生物群作为NPD的生物标志物提供了一个有希望的方向。尽管女性的效应量大于男性,但男女之间也出现了类似的趋势。这些发现鼓励了未来对肠道微生物群在NPD中的作用及其与药物治疗的相互作用的研究。
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引用次数: 0
Re-encountering the phobic cue within days after a reconsolidation intervention is crucial to observe a lasting fear reduction in spider phobia 在再巩固干预后的几天内再次遇到恐惧线索对于观察蜘蛛恐惧症的持久恐惧减少至关重要
IF 11 1区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-01-09 DOI: 10.1038/s41380-024-02882-1
Jacqueline Peters, Anna I. Filmer, Johnny B. van Doorn, Vivian N. Metselaar, Renée M. Visser, Merel Kindt

Memory reconsolidation interventions offer an exciting alternative to exposure treatment because they may target fear memories directly, thereby preventing relapse. A previous reconsolidation intervention for spider fear abruptly reduced avoidance behaviour, whereas changes in self-reported fear followed later. In this pre-registered placebo-controlled study, we first aimed to conceptually replicate these effects in spider phobia. Second, we investigated whether re-encountering the phobic cue after the reconsolidation intervention is necessary for changes in self-reported fear to occur. Third, we tested whether the window to trigger such changes is time limited. Individuals with spider phobia (N = 69) were randomized into three groups and underwent a memory reactivation procedure with a tarantula, followed immediately by propranolol (reconsolidation intervention) or placebo. One reconsolidation intervention group and the placebo group re-encountered spiders two days after treatment in behavioural approach tasks, whereas another reconsolidation intervention group re-encountered spiders after four weeks. Changes in spider avoidance behaviour and self-reported fear were followed for one year. In the short term, the reconsolidation intervention was not more effective than placebo: both conditions benefited from the intervention. In the long term, the reconsolidation intervention was more effective than placebo, but only when the phobic stimulus was re-encountered within days after treatment. Specifically, we found less tarantula avoidance behaviour and self-reported fear over the course of one year when spiders were re-encountered two days after the reconsolidation intervention, but not when the behavioural test was conducted four weeks after the intervention. These findings challenge the idea that a reconsolidation-inspired intervention alone is sufficient to treat clinical fears: Experiencing the behavioural change during the re-encounter within days after the reconsolidation window has closed seems crucial to observe a lasting fear reduction.

记忆再巩固干预为暴露治疗提供了一个令人兴奋的替代方案,因为它们可以直接针对恐惧记忆,从而防止复发。先前对蜘蛛恐惧的再巩固干预突然减少了回避行为,而随后自我报告的恐惧发生了变化。在这项预先注册的安慰剂对照研究中,我们首先旨在从概念上复制蜘蛛恐惧症的这些影响。其次,我们调查了在再巩固干预后再次遇到恐惧线索是否是自我报告恐惧发生变化的必要条件。第三,我们测试了触发这些变化的窗口是否有时间限制。患有蜘蛛恐惧症的个体(N = 69)被随机分为三组,并接受与狼蛛一起的记忆再激活程序,随后立即服用心得安(再巩固干预)或安慰剂。一个再巩固干预组和安慰剂组在行为方法任务治疗两天后再次遇到蜘蛛,而另一个再巩固干预组在四周后再次遇到蜘蛛。蜘蛛躲避行为和自我报告恐惧的变化被跟踪了一年。在短期内,再巩固干预并不比安慰剂更有效:两种情况都从干预中受益。从长期来看,再巩固干预比安慰剂更有效,但只有在治疗后几天内再次遇到恐惧刺激时才有效。具体来说,我们发现,在一年中,当在重新巩固干预后两天再次遇到蜘蛛时,狼蛛回避行为和自我报告的恐惧行为减少了,但在干预后四周进行行为测试时,情况并非如此。这些发现挑战了这样一种观点,即仅靠重新巩固激发的干预就足以治疗临床恐惧:在重新巩固窗口关闭后的几天内,在再次遇到时经历行为改变似乎对观察持久的恐惧减少至关重要。
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引用次数: 0
Quantitative magnetization transfer and g-ratio imaging of white matter myelin in early psychotic spectrum disorders 早期精神病谱系障碍患者白质髓磷脂定量磁化转移和g-比值成像
IF 11 1区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-01-08 DOI: 10.1038/s41380-024-02883-0
Yu Veronica Sui, Hilary Bertisch, Donald C. Goff, Alexey Samsonov, Mariana Lazar

Myelin abnormalities in white matter have been implicated in the pathophysiology of psychotic spectrum disorders (PSD), which are characterized by brain dysconnectivity as a core feature. Among evidence from in vivo MRI studies, diffusion imaging findings have largely supported disrupted white matter integrity in PSD; however, they are not specific to myelin changes. Using a multimodal imaging approach, the current study aimed to further delineate myelin and microstructural changes in the white matter of a young PSD cohort. We utilized quantitative magnetization transfer (qMT) imaging combined with advanced diffusion imaging to estimate specific myelin-related biophysical properties in 51 young adult PSD patients compared with 38 age-matched healthy controls. The macromolecular proton fraction (MPF) obtained from qMT was used as a specific marker of myelin content. Additionally, MPF was employed along with diffusion metrics of axonal density (vic) and extra-cellular volume fraction to derive the g-ratio, a measure of relative myelin sheath thickness defined as the ratio of inner to outer axonal diameter. Compared to controls, we observed a widespread MPF reduction and localized g-ratio increase in patients, primarily those with a diagnosis of schizophrenia or depressive schizoaffective disorder. No between-group differences were noted in vic, suggesting similar axonal densities across groups. Correlation analysis revealed that lower MPF was significantly related to poorer working memory performance in PSD, while the HC group showed a positive association for working memory with both g-ratio and vic. The pattern of changes observed in our multimodal imaging markers suggests that PSD, depending on symptomatology, is characterized by specific alterations in white matter integrity and myelin-axonal geometry of major white matter tracts, which may impact working memory function. These findings provide a more detailed view of myelin-related white matter changes in early stages of PSD.

白质髓磷脂异常与精神病谱系障碍(PSD)的病理生理有关,PSD以脑连接障碍为核心特征。在体内MRI研究的证据中,扩散成像结果在很大程度上支持PSD中白质完整性破坏;然而,它们并不是髓磷脂变化所特有的。采用多模态成像方法,本研究旨在进一步描述年轻PSD队列中髓磷脂和白质的微观结构变化。我们利用定量磁化转移(qMT)成像结合先进的扩散成像来评估51名年轻成年PSD患者与38名年龄匹配的健康对照组的特定髓磷脂相关生物物理特性。从qMT中获得的大分子质子分数(MPF)被用作髓磷脂含量的特异性标记物。此外,MPF与轴突密度(vic)和细胞外体积分数的扩散指标一起使用,得出g比,g比是髓鞘相对厚度的度量,定义为内轴突直径与外轴突直径的比值。与对照组相比,我们观察到患者中广泛的MPF降低和局部g比增加,主要是那些诊断为精神分裂症或抑郁症分裂情感障碍的患者。vic各组间无差异,提示各组间轴突密度相似。相关分析显示,低MPF与PSD的工作记忆表现显著相关,而HC组的工作记忆表现与g比和vic均呈正相关。在我们的多模态成像标记中观察到的变化模式表明,PSD取决于症状,其特征是白质完整性和主要白质束髓鞘轴突几何形状的特定改变,这可能影响工作记忆功能。这些发现为PSD早期髓磷脂相关白质变化提供了更详细的观点。
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引用次数: 0
Sex differences in mitochondrial free-carnitine levels in subjects at-risk and with Alzheimer’s disease in two independent study cohorts 在两个独立研究队列中,阿尔茨海默病患者和高危人群线粒体游离肉碱水平的性别差异
IF 11 1区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-01-07 DOI: 10.1038/s41380-024-02862-5
Benedetta Bigio, Ricardo A. S. Lima-Filho, Olivia Barnhill, Felipe K. Sudo, Claudia Drummond, Naima Assunção, Bart Vanderborght, James Beasley, Sarah Young, Aryeh Korman, Drew R. Jones, David L. Sultzer, Sergio T. Ferreira, Paulo Mattos, Elizabeth Head, Fernanda Tovar-Moll, Fernanda G. De Felice, Mychael V. Lourenco, Carla Nasca

A major challenge in the development of more effective therapeutic strategies for Alzheimer’s disease (AD) is the identification of molecular mechanisms linked to specific pathophysiological features of the disease. Importantly AD has a two-fold higher incidence in women than men and a protracted prodromal phase characterized by amnestic mild-cognitive impairment (aMCI) suggesting that biological processes occurring early can initiate vulnerability to AD. Here, we used a sample of 125 subjects from two independent study cohorts to determine the levels in plasma (the most accessible specimen) of two essential mitochondrial markers acetyl-L-carnitine (LAC) and its derivative free-carnitine motivated by a mechanistic model in rodents in which targeting mitochondrial metabolism of LAC leads to the amelioration of cognitive function and boosts epigenetic mechanisms of gene expression. We report a sex-specific deficiency in free-carnitine levels in women with aMCI and early-AD compared to cognitively healthy controls; no change was observed in men. We also replicated the prior finding of decreased LAC levels in both women and men with AD, supporting the robustness of the study samples assayed in our new study. The magnitude of the sex-specific free-carnitine deficiency reflected the severity of cognitive dysfunction and held in two study cohorts. Furthermore, patients with the lower free-carnitine levels showed higher β-amyloid(Aβ) accumulation and t-Tau levels assayed in cerebrospinal fluid (CSF). Computational analyses showed that the mitochondrial markers assayed in plasma are at least as accurate as CSF measures to classify disease status. Together with the mechanistic platform in rodents, these translational findings lay the groundwork to create preventive individualized treatments targeting sex-specific changes in mitochondrial metabolism that may be subtle to early cognitive dysfunction of AD risk.

在开发更有效的阿尔茨海默病(AD)治疗策略的过程中,一个主要挑战是确定与该疾病特定病理生理特征相关的分子机制。重要的是,阿尔茨海默病在女性中的发病率比男性高两倍,并且以遗忘性轻度认知障碍(aMCI)为特征的前驱期延长,这表明早期发生的生物学过程可能引发阿尔茨海默病的易感性。在这里,我们使用了来自两个独立研究队列的125名受试者的样本,以确定血浆(最容易获得的样本)中两种必需的线粒体标记乙酰左旋肉碱(LAC)及其衍生物游离左旋肉碱的水平。在啮齿动物的机制模型中,靶向LAC的线粒体代谢导致认知功能的改善,并促进基因表达的表观遗传机制。我们报告了与认知健康对照相比,aMCI和早期ad女性的游离肉碱水平存在性别特异性缺陷;在男性中没有观察到变化。我们还重复了先前在AD患者中女性和男性LAC水平降低的发现,支持我们新研究中研究样本的稳健性。性别特异性游离肉碱缺乏的程度反映了认知功能障碍的严重程度,并在两个研究队列中得到证实。此外,游离肉碱水平较低的患者脑脊液(CSF)中β-淀粉样蛋白(Aβ)积累和t-Tau水平较高。计算分析表明,血浆中测定的线粒体标记至少与脑脊液测定的疾病状态分类一样准确。结合啮齿类动物的机制平台,这些转化性发现为创建针对线粒体代谢性别特异性变化的预防性个体化治疗奠定了基础,这些变化可能是AD早期认知功能障碍风险的微妙因素。
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引用次数: 0
Exposure to childhood maltreatment is associated with specific epigenetic patterns in sperm 儿童时期遭受虐待与精子的特定表观遗传模式有关
IF 11 1区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-01-03 DOI: 10.1038/s41380-024-02872-3
Jetro J. Tuulari, Matthieu Bourgery, Jo Iversen, Thomas Gade Koefoed, Annukka Ahonen, Ammar Ahmedani, Eeva-Leena Kataja, Linnea Karlsson, Romain Barrès, Hasse Karlsson, Noora Kotaja

Childhood maltreatment exposure (CME) increases the risk of adverse long-term health consequences for the exposed individual. Animal studies suggest that CME may also influence the health and behaviour in the next generation offspring through CME-driven epigenetic changes in the germ line. Here we investigated the associated between early life stress on the epigenome of sperm in humans with history of CME. We measured paternal CME using the Trauma and Distress Scale (TADS) questionnaire and mapped sperm-borne sncRNAs expression by small RNA sequencing (small RNA-seq) and DNA methylation (DNAme) in spermatozoa by reduced-representation bisulfite sequencing (RRBS-seq) in males from the FinnBrain Birth Cohort Study. The study design was a (nested) case-control study, high-TADS (TADS ≥ 39, n = 25 for DNAme and n = 14 for small RNA-seq) and low-TADS (TADS ≤ 10, n = 30 for DNAme and n = 16 for small RNA-seq). We identified 3 genomic regions with differential methylation between low and high-TADS and 68 tRNA-derived small RNAs (tsRNAs) and miRNAs with different levels in males with high CME (False discovery rate, FDR corrected p < 0.05). Of potential interest, we identified differential expression of miRNA hsa-mir-34c-5p and differential methylation levels near the CRTC1 and GBX2 genes, which are documented to control brain development. Our results provide further evidence that early life stress influences the paternal germline epigenome and supports a possible effect in modulating the development of the central nervous system of the next generation.

儿童虐待暴露增加了暴露者长期健康不良后果的风险。动物研究表明,CME还可能通过CME驱动的生殖系表观遗传变化影响下一代后代的健康和行为。在这里,我们研究了早期生活压力对人类精子表观基因组的影响与CME病史之间的关系。我们使用创伤和痛苦量表(TADS)问卷测量了父亲的CME,并通过小RNA测序(small RNA-seq)绘制了精子中sncRNAs的表达,并通过减少代表性亚硫酸氢盐测序(RRBS-seq)绘制了精子中的DNA甲基化(DNAme)。研究设计为(嵌套)病例对照研究,高TADS (TADS≥39,DNAme = 25,小RNA-seq = 14)和低TADS (TADS≤10,DNAme = 30,小RNA-seq = 16)。我们发现了3个基因组区域在低tads和高tads之间存在差异甲基化,68个trna衍生的小rna (tsrna)和miRNAs在高CME男性中具有不同水平(错误发现率,FDR校正p <; 0.05)。潜在的兴趣是,我们鉴定了miRNA hsa-mir-34c-5p的差异表达和CRTC1和GBX2基因附近的差异甲基化水平,这些基因被证明控制大脑发育。我们的研究结果提供了进一步的证据,证明早期生活压力影响父系生殖系表观基因组,并支持在调节下一代中枢神经系统发育方面的可能影响。
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引用次数: 0
Circular reasoning concerning Red flags for predicting rituximab response in OCD. 关于预测强迫症患者利妥昔单抗反应的危险信号的循环推理。
IF 9.6 1区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-01-03 DOI: 10.1038/s41380-024-02885-y
Susanne Bejerot, Albert Max Hietala, Annika Söderbergh, Mats B Humble
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引用次数: 0
Unraveling the associations between voice pitch and major depressive disorder: a multisite genetic study 揭示音高与重度抑郁症之间的联系:一项多位点基因研究
IF 11 1区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-12-31 DOI: 10.1038/s41380-024-02877-y
Yazheng Di, Elior Rahmani, Joel Mefford, Jinhan Wang, Vijay Ravi, Aditya Gorla, Abeer Alwan, Kenneth S. Kendler, Tingshao Zhu, Jonathan Flint

Major depressive disorder (MDD) often goes undiagnosed due to the absence of clear biomarkers. We sought to identify voice biomarkers for MDD and separate biomarkers indicative of MDD predisposition from biomarkers reflecting current depressive symptoms. Using a two-stage meta-analytic design to remove confounds, we tested the association between features representing vocal pitch and MDD in a multisite case-control cohort study of Chinese women with recurrent depression. Sixteen features were replicated in an independent cohort, with absolute association coefficients (beta values) from the combined analysis ranging from 0.24 to 1.07, indicating moderate to large effects. The statistical significance of these associations remained robust, with P values ranging from 7.2 × 10–6 to 6.8 × 10–58. Eleven features were significantly associated with current depressive symptoms. Using genotype data, we found that this association was driven in part by a genetic correlation with MDD. Significant voice features, reflecting a slower pitch change and a lower pitch, achieved an AUC-ROC of 0.90 (sensitivity of 0.85 and specificity of 0.81) in MDD classification. Our results return vocal features to a more central position in clinical and research work on MDD.

由于缺乏明确的生物标志物,重度抑郁症(MDD)经常无法确诊。我们试图确定MDD的语音生物标志物,并将指示MDD易感性的生物标志物与反映当前抑郁症状的生物标志物分开。采用两阶段荟萃分析设计来消除混杂因素,我们在一项中国复发性抑郁症女性的多地点病例对照队列研究中测试了代表音调的特征与重度抑郁症之间的关联。在独立队列中重复了16个特征,联合分析的绝对关联系数(β值)范围为0.24至1.07,表明中等至较大的影响。这些相关性的统计显著性仍然很强,P值在7.2 × 10-6至6.8 × 10-58之间。11项特征与当前抑郁症状显著相关。使用基因型数据,我们发现这种关联部分是由与MDD的遗传相关性驱动的。显著的声音特征,反映较慢的音调变化和较低的音调,在MDD分类中实现了0.90的AUC-ROC(敏感性为0.85,特异性为0.81)。我们的研究结果使声音特征在重度抑郁症的临床和研究工作中处于更加中心的位置。
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引用次数: 0
Assessment and ascertainment in psychiatric molecular genetics: challenges and opportunities for cross-disorder research 精神病学分子遗传学的评估和确定:交叉障碍研究的挑战和机遇
IF 11 1区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-12-27 DOI: 10.1038/s41380-024-02878-x
Na Cai, Brad Verhulst, Ole A. Andreassen, Jan Buitelaar, Howard J. Edenberg, John M. Hettema, Michael Gandal, Andrew Grotzinger, Katherine Jonas, Phil Lee, Travis T. Mallard, Manuel Mattheisen, Michael C. Neale, John I. Nurnberger, Wouter Peyrout, Elliot M. Tucker-Drob, Jordan W. Smoller, Kenneth S. Kendler

Psychiatric disorders are highly comorbid, heritable, and genetically correlated [1,2,3,4]. The primary objective of cross-disorder psychiatric genetics research is to identify and characterize both the shared genetic factors that contribute to convergent disease etiologies and the unique genetic factors that distinguish between disorders [4, 5]. This information can illuminate the biological mechanisms underlying comorbid presentations of psychopathology, improve nosology and prediction of illness risk and trajectories, and aid the development of more effective and targeted interventions. In this review we discuss how estimates of comorbidity and identification of shared genetic loci between disorders can be influenced by how disorders are measured (phenotypic assessment) and the inclusion or exclusion criteria in individual genetic studies (sample ascertainment). Specifically, the depth of measurement, source of diagnosis, and time frame of disease trajectory have major implications for the clinical validity of the assessed phenotypes. Further, biases introduced in the ascertainment of both cases and controls can inflate or reduce estimates of genetic correlations. The impact of these design choices may have important implications for large meta-analyses of cohorts from diverse populations that use different forms of assessment and inclusion criteria, and subsequent cross-disorder analyses thereof. We review how assessment and ascertainment affect genetic findings in both univariate and multivariate analyses and conclude with recommendations for addressing them in future research.

精神疾病是高度共病、可遗传和遗传相关的[1,2,3,4]。交叉障碍精神病学遗传学研究的主要目标是识别和表征导致疾病趋同病因的共同遗传因素和区分疾病的独特遗传因素[4,5]。这些信息可以阐明精神病理学共病表现的生物学机制,改善疾病分类学和疾病风险和轨迹的预测,并有助于开发更有效和有针对性的干预措施。在这篇综述中,我们讨论了疾病之间共病的估计和共享遗传位点的识别如何受到疾病测量方式(表型评估)和个体遗传研究中的纳入或排除标准(样本确定)的影响。具体而言,测量深度、诊断来源和疾病轨迹的时间框架对评估表型的临床有效性具有重要影响。此外,在确定病例和对照时引入的偏差可以夸大或降低遗传相关性的估计。这些设计选择的影响可能对使用不同形式的评估和纳入标准的来自不同人群的队列的大型荟萃分析以及随后的交叉障碍分析具有重要意义。我们回顾了在单变量和多变量分析中评估和确定如何影响遗传发现,并总结了在未来研究中解决这些问题的建议。
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Molecular Psychiatry
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