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CFG-MambaNet: Contextual and Frequency-Guided Mamba Network for medical image segmentation CFG-MambaNet:用于医学图像分割的上下文和频率引导曼巴网络
IF 15.2 1区 医学 Q1 HEALTH CARE SCIENCES & SERVICES Pub Date : 2026-01-31 DOI: 10.1038/s41746-026-02393-z
Guoqiang Ren, Zhen Chen, Pengxiang Su, Da Li, Xiaoping Yang, Di Gai, Xin Wei, Weifeng Xu, Hongping Chen, Xiaoguang Zhao, Xiaofei Wang, Pengfei Liu, Honghua Ye, Yanfeng Ma
Accurate medical image segmentation continues to pose significant challenges, as existing methods often struggle to concurrently achieve efficient global context modeling, precise boundary delineation, and robust generalization. To address these issues, a novel framework named Contextual and Frequency-Guided Mamba Network (CFG-MambaNet) is presented. Specifically, a variable-scale state space block based on Mamba is employed so that long-range dependencies can be captured with linear complexity, efficiently addressing the inefficiency of Transformer-based models in high-resolution medical imaging. Moreover, a frequency-guided representation module is incorporated to explicitly separate global low-frequency structures from high-frequency boundary details, which significantly alleviates the difficulty of segmenting lesions with blurred contours or weak textures. Furthermore, an adaptive context aggregation mechanism is introduced to integrate heterogeneous semantic cues and to consistently highlight clinically critical regions, substantially improving robustness across diverse anatomical scales and morphologies. To further stabilize training and improve boundary adherence, a composite loss combined with deep supervision is employed. Extensive experiments were conducted on four publicly available datasets, including ACDC, Kvasir-SEG, ISIC, and SEED, covering cardiac MRI, endoscopy, dermoscopy, and pathology images.
由于现有方法往往难以同时实现高效的全局上下文建模、精确的边界划分和鲁棒泛化,因此准确的医学图像分割仍然面临着重大挑战。为了解决这些问题,提出了一个名为上下文和频率引导曼巴网络(CFG-MambaNet)的新框架。具体而言,采用了基于Mamba的变尺度状态空间块,从而可以捕获具有线性复杂性的远程依赖关系,有效地解决了基于transformer的模型在高分辨率医学成像中的低效率问题。此外,引入频率引导表示模块,将全局低频结构与高频边界细节明确分离,显著缓解了轮廓模糊或纹理弱的病变分割的困难。此外,引入了自适应上下文聚合机制来整合异构语义线索,并一致地突出临床关键区域,从而大大提高了不同解剖尺度和形态的鲁棒性。为了进一步稳定训练和提高边界依从性,采用了复合损失和深度监督相结合的方法。在ACDC、Kvasir-SEG、ISIC和SEED四个公开可用的数据集上进行了广泛的实验,涵盖心脏MRI、内窥镜、皮肤镜和病理图像。
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引用次数: 0
Ten-year population-based assessment of multimorbidity burden progression in a regional cohort of 5.5 million adults 550万成人区域队列中基于人群的十年多病负担进展评估
IF 15.2 1区 医学 Q1 HEALTH CARE SCIENCES & SERVICES Pub Date : 2026-01-31 DOI: 10.1038/s41746-026-02395-x
Damià Valero-Bover, David Monterde, Gerard Carot-Sans, Emili Vela, Rubèn González-Colom, Josep Roca, Caridad Pontes, Xabier Michelena, Maria Mercedes Nogueras, Pilar Aparicio, Inmaculada Corrales, Teresa Biec, Isaac Cano, Jordi Piera-Jiménez
Multimorbidity, a major driver of healthcare demand and clinical complexity, is often addressed in a disease-centric manner and remains insufficiently understood in its population-level dynamics. Using data from a 10-year population-based cohort of 5.5 million adults in Catalonia, Spain, we quantified multimorbidity-associated clinical complexity using the Adjusted Morbidity Groups (AMG) index to predict progression from low/moderate ( < P80) to high/very high ( ≥ P80) complexity. Machine learning models identified predictive factors, while network analyses explored co-occurrence patterns among chronic conditions. During follow-up, 39.2% of the individuals who remained alive throughout the analysis period transitioned to high/very high complexity. Baseline AMG score was the strongest predictor of progression, surpassing models relying solely on individual diagnoses. The most prevalent conditions were nutritional and endocrine disorders, anxiety, and hypertension, with notable sequential links between mental and physical disorders. Findings emphasize the need for integrated, patient-centred care strategies and population-based prevention approaches to mitigate multimorbidity progression.
多病是医疗保健需求和临床复杂性的主要驱动因素,通常以疾病为中心的方式加以解决,但在人口水平的动态中仍未得到充分了解。使用来自西班牙加泰罗尼亚地区550万成年人的10年人群队列数据,我们使用调整发病率组(AMG)指数量化多发病相关的临床复杂性,以预测从低/中度(< P80)到高/非常高(≥P80)复杂性的进展。机器学习模型确定了预测因素,而网络分析探索了慢性病的共现模式。在随访期间,39.2%的存活个体在整个分析期间过渡到高/非常高的复杂性。基线AMG评分是病情进展的最强预测指标,超过了单纯依赖个体诊断的模型。最常见的疾病是营养和内分泌失调、焦虑和高血压,精神和身体疾病之间存在显著的顺序联系。研究结果强调需要综合的、以患者为中心的护理策略和以人群为基础的预防方法来减轻多病进展。
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引用次数: 0
Anticipation and prevention of real risks of virtual environments in psychiatry. 精神病学虚拟环境真实风险的预测和预防。
IF 15.2 1区 医学 Q1 HEALTH CARE SCIENCES & SERVICES Pub Date : 2026-01-30 DOI: 10.1038/s41746-026-02348-4
Maria Marloth,Celia Deane-Drummond,Philipp Kellmeyer,Marc Erich Latoschik,Jennifer A Chandler,Gerben Meynen,Kai Vogeley
Extended reality (=XR) provides promising opportunities for psychiatry in the future. However, psychiatric patients appear to be particularly vulnerable to virtual exposure. With a focus on virtual embodiment and virtual social interaction, we therefore, 1. describe the specific risks of virtual exposures, 2. discuss them in relation to specific psychopathological symptoms and 3. outline initial strategies that enable safe exposure with a strong emphasis on participatory designs.
扩展现实(XR)为未来的精神病学提供了有希望的机会。然而,精神病人似乎特别容易受到虚拟环境的影响。基于对虚拟化身和虚拟社会互动的关注,我们因此,1。描述虚拟暴露的具体风险,2。讨论它们与特定精神病理症状的关系。概述确保安全暴露的初步战略,强调参与性设计。
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引用次数: 0
Decoding the ERS-CAF immunoregulatory axis via multimodal AI and its pan-cancer prognostic and therapeutic predictive value. 通过多模态人工智能解码ERS-CAF免疫调节轴及其泛癌预后和治疗预测价值。
IF 15.2 1区 医学 Q1 HEALTH CARE SCIENCES & SERVICES Pub Date : 2026-01-30 DOI: 10.1038/s41746-026-02388-w
Bo-Wen Zheng,Chao Xia,Ming Tang,Wei Huang,Bo-Yv Zheng,Hua-Qing Niu,Jing Li,Tao-Lan Zhang,Hong Zhou,Ming-Xiang Zou
Endoplasmic reticulum stress-related cancer-associated fibroblasts (ERS-CAF) remodel the tumor microenvironment and drive immune exclusion and therapy resistance in chordoma, yet routine and non-invasive readouts of this biology are lacking. We hypothesized that standard pre-operative MRI and H&E whole-slide images (WSI) encode image-based surrogates of ERS-CAF-driven immunoregulation that can be learned and generalized across cancers. Three bulk-transcriptomic reference scores were defined for surrogate supervision, capturing ERS-program activity, ERS-CAF-immuneligand-receptor crosstalk and microenvironmental heterogeneity. In 126 chordoma cases, a stage-wise multimodal framework integrating calibrated WSI attention, gated radiopathomic fusion and domain alignment showed strong concordance with molecular profiles, independent prognostic value and biologically specific localization to fibrotic immune-excluded regions. These associations were generalized in zero-shot analyses to the TCGA pan-cancer. An MRI-only distilled model preserved most predictive performance with substantial gains in efficiency, supporting scalable non-invasive clinical application.
内质网应激相关的癌症相关成纤维细胞(ERS-CAF)重塑肿瘤微环境,驱动脊索瘤的免疫排斥和治疗抵抗,但缺乏这种生物学的常规和非侵入性解读。我们假设标准的术前MRI和H&E全片图像(WSI)编码了基于图像的ers - cafi驱动的免疫调节的替代物,可以在癌症中学习和推广。定义了三个大体积转录组参考评分,用于替代监督,捕获ers程序活性,ers - ca -免疫配体-受体串扰和微环境异质性。在126例脊索瘤病例中,一个分阶段的多模式框架整合了校准的WSI注意、门控的放射病理融合和区域比对,显示出与分子谱、独立的预后价值和纤维化免疫排斥区域的生物学特异性定位的强烈一致性。这些关联在零概率分析中被推广到TCGA泛癌。仅用mri提取的模型保留了大多数预测性能,并大幅提高了效率,支持可扩展的非侵入性临床应用。
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引用次数: 0
Machine learning models for drug-drug interaction prediction from computational discovery to clinical application. 从计算发现到临床应用的药物相互作用预测的机器学习模型。
IF 15.2 1区 医学 Q1 HEALTH CARE SCIENCES & SERVICES Pub Date : 2026-01-29 DOI: 10.1038/s41746-026-02400-3
Yuqing Lu,Jing Chen,Nini Fan,Wenchao Song,Haiyang Sheng,Yinfeng Yang,Jinghui Wang
Drug-drug interaction (DDI) poses a major challenge in clinical pharmacology, often compromising therapeutic efficacy or causing serious adverse events. Traditional detection methods, heavily dependent on experimental assays and expert knowledge, are constrained by high costs and limited scalability. This work explores emerging machine learning (ML)-based strategies for predicting DDIs by leveraging the rapidly expanding biomedical data landscape. Recent advances in deep learning architectures, graph neural networks and sophisticated feature engineering have markedly improved predictive performance, offering scalable and data-efficient alternatives to conventional approaches. We further highlight real-world clinical applications where ML-based models have enhanced drug safety monitoring and informed therapeutic decision-making. Finally, we discuss critical challenges like model interpretability, generalizability and integration with clinical workflows, and outline future directions toward building robust, explainable and clinically actionable DDI prediction systems. This work provides a comprehensive perspective on how AI-driven methodologies are reshaping pharmacovigilance and precision therapeutics.
药物-药物相互作用(DDI)是临床药理学的主要挑战,经常影响治疗效果或引起严重的不良事件。传统的检测方法严重依赖于实验分析和专家知识,受到高成本和有限的可扩展性的限制。这项工作探索了新兴的基于机器学习(ML)的策略,通过利用快速扩展的生物医学数据景观来预测ddi。深度学习架构、图神经网络和复杂特征工程的最新进展显著提高了预测性能,为传统方法提供了可扩展和数据高效的替代方案。我们进一步强调了现实世界的临床应用,其中基于ml的模型增强了药物安全监测和知情的治疗决策。最后,我们讨论了关键的挑战,如模型的可解释性、通用性和与临床工作流程的集成,并概述了构建稳健、可解释和临床可操作的DDI预测系统的未来方向。这项工作为人工智能驱动的方法如何重塑药物警戒和精确治疗提供了一个全面的视角。
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引用次数: 0
Non-invasive liquid biopsy based on metabolomic profiling improves diagnosis and early warning of severe acute pancreatitis. 基于代谢组学分析的无创液体活检提高了严重急性胰腺炎的诊断和早期预警。
IF 15.2 1区 医学 Q1 HEALTH CARE SCIENCES & SERVICES Pub Date : 2026-01-29 DOI: 10.1038/s41746-025-02294-7
Dawei Deng,Qihang Yuan,Chen Pan,Junhong Chen,Jianjun Liu,Song Wei,Yi Liu,Yutong Zhu,Tianfu Wei,Jianliang Cao,Zeming Wu,Yuepeng Hu,Dong Shang,Peiyuan Yin
To identify novel diagnostic biomarkers for acute pancreatitis (AP) and facilitate the early prediction of severe AP (SAP), this investigation characterized the serum metabolomic profiles of patients across distinct disease phases and integrated metabolomics with artificial intelligence to construct bile acid-based predictive models. The observational protocol was registered with the Chinese Clinical Trial Registry (ChiCTR2000034117) on June 24, 2020. Comparative metabolomic analysis revealed significant alterations in 303 metabolites and 461 lipid species in AP. Subsequent weighted gene coexpression network analysis demonstrated robust correlations between clinical parameters and specific metabolic clusters, particularly bile acids (BAs) and lipid species. Targeted quantification of 63 BAs was subsequently performed within a multicentre validation cohort (n = 948). Machine learning algorithms applied to these data facilitated the derivation of two distinct BA panels. The first panel, comprising nine BAs, demonstrated high diagnostic accuracy for AP, including among individuals with negative conventional enzymatic biomarkers, and effectively discriminated AP from acute cholangitis, as reflected by elevated area under the curve (AUC) values. A second panel, consisting of 13 BAs, reliably identified patients at elevated risk for SAP progression. Collectively, these results validate the translational potential of machine learning-driven metabolic biomarkers for the precision management of acute abdominal conditions, underscore the clinical utility of BAs as promising diagnostic and prognostic biomarkers in acute pancreatitis, and provide a new paradigm for the development of dynamic risk early-warning systems (Clinical Trial Registration Our study is an observational study registered in ChiCTR (ChiCTR2000034117) on 2020/06/24, not a prospective interventional clinical trial, and therefore does not fall under the ICMJE definition of a clinical trial requiring CONSORT compliance).
为了确定急性胰腺炎(AP)的新型诊断生物标志物并促进严重AP (SAP)的早期预测,本研究表征了不同疾病阶段患者的血清代谢组学特征,并将代谢组学与人工智能相结合,构建基于胆汁酸的预测模型。该观察性方案已于2020年6月24日在中国临床试验注册中心注册(ChiCTR2000034117)。比较代谢组学分析显示,AP中有303种代谢物和461种脂质物质发生了显著变化。随后的加权基因共表达网络分析显示,临床参数与特定代谢簇,特别是胆汁酸(BAs)和脂质物质之间存在强大的相关性。随后在多中心验证队列(n = 948)中对63个BAs进行了靶向量化。应用于这些数据的机器学习算法促进了两个不同BA面板的推导。第一个小组,包括9个BAs,显示出对AP的高诊断准确性,包括在传统酶生物标志物阴性的个体中,并有效地区分AP和急性胆管炎,这反映在曲线下面积(AUC)值升高上。第二组由13名BAs组成,可靠地确定了SAP进展风险升高的患者。总之,这些结果验证了机器学习驱动的代谢生物标志物在急性腹部疾病精确管理方面的转化潜力,强调了BAs作为急性胰腺炎有前景的诊断和预后生物标志物的临床应用,并为动态风险预警系统的发展提供了新的范例。不是前瞻性干预性临床试验,因此不属于ICMJE对临床试验要求CONSORT依从性的定义)。
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引用次数: 0
AI-driven low-cost rehabilitation exergame as a lightweight framework for stroke assessment 人工智能驱动的低成本康复游戏作为卒中评估的轻量级框架
IF 15.2 1区 医学 Q1 HEALTH CARE SCIENCES & SERVICES Pub Date : 2026-01-28 DOI: 10.1038/s41746-026-02383-1
Júlia Tannús, Caroline Valentini, Eduardo Naves
Stroke is a leading cause of long-term disability, often affecting upper-limb motor function and requiring continuous assessment. The Fugl-Meyer Assessment (FMA), though a clinical gold standard, is time-consuming and demands specialized personnel. This study presents an AI-driven, low-cost rehabilitation exergame that simultaneously provides therapy and automatically estimates upper-limb motor performance during gameplay using only a standard camera. Sixteen kinematic and spatiotemporal features were extracted from 2D hand and arm trajectories of twelve post-stroke individuals (24 limbs, 14 affected) using the MediaPipe framework. Features such as hand angle, range of motion, movement area, traveled distance, and shoulder–elbow coordination showed strong correlations with FMA scores and stratified participants by motor severity. A lightweight linear regression model achieved high predictive performance (Spearman ρ = 0.92, R² = 0.89, RMSE = 4.42) and classified severity levels with 86–93% accuracy. This interpretable approach outperformed complex machine learning models, highlighting the clinical relevance of transparent metrics embedded in gameplay. The proposed framework is sensor-free, scalable, and reproducible, offering immediate feedback while reducing clinical workload and enabling accessible digital biomarkers for telerehabilitation and remote monitoring after stroke.
中风是长期残疾的主要原因,经常影响上肢运动功能,需要持续评估。Fugl-Meyer评估(FMA)虽然是临床黄金标准,但耗时且需要专业人员。这项研究提出了一种人工智能驱动的低成本康复游戏,它可以同时提供治疗,并在游戏过程中使用标准摄像头自动评估上肢运动表现。使用MediaPipe框架从12例脑卒中后个体(24条肢体,14条受影响)的2D手部和手臂轨迹中提取了16个运动学和时空特征。手角度、运动范围、运动面积、运动距离和肩肘协调等特征与FMA评分有很强的相关性,并根据运动严重程度对参与者进行分层。轻量级线性回归模型具有较高的预测性能(Spearman ρ = 0.92, R²= 0.89,RMSE = 4.42),对严重程度进行分类的准确率为86-93%。这种可解释的方法优于复杂的机器学习模型,突出了嵌入在游戏玩法中的透明指标的临床相关性。该框架无传感器,可扩展,可重复,提供即时反馈,同时减少临床工作量,并为中风后的远程康复和远程监测提供可访问的数字生物标志物。
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引用次数: 0
Human–large language model collaboration in clinical medicine: a systematic review and meta-analysis 临床医学中人类大语言模型协作:系统回顾和荟萃分析
IF 15.2 1区 医学 Q1 HEALTH CARE SCIENCES & SERVICES Pub Date : 2026-01-28 DOI: 10.1038/s41746-026-02382-2
Guoyong Wang, Kaijun Zhang, Jiyue Jiang, Chaonan Wang, Hui Bi, Haojun Liang, Zuoliang Qi, Ying Huang, Yu Li, Xiaonan Yang
Human–AI collaboration (H + AI) using large language models (LLMs) offers a promising approach to enhance clinical reasoning, documentation, and interpretation tasks. Following PRISMA 2020 (PROSPERO registration: CRD420251068272), we systematically compared H + AI with human-only (H) workflows, searching four databases through June 28, 2025. Ten peer-reviewed studies met eligibility criteria, with three preprints informing sensitivity analyses only. Diagnostic/interpretation accuracy (k = 2) showed a positive trend for H + AI (Risk Ratio [RR] 1.59), but was statistically imprecise and non-significant (95% CI 0.08 to 32.74), with 95% prediction intervals (PI) crossing the null. Composite diagnostic/management scores (k = 2) showed a statistically significant improvement (Mean Difference [MD] +4.88 percentage points, 95% CI + 0.65 to +9.12), yet the PI (–31.65 to 41.42) indicates high real-world uncertainty. Time efficiency (k = 3) showed no overall difference (MD + 0.4 min, 95%CI −4.18 to +4.97; I² = 70.1%). While documentation quality improved, but factual error rates remained high (~26–36%), undermining quality gains. In three-arm settings, H + AI did not universally outperform AI-only. Evidence remains preliminary yet highly uncertain and context-dependent. We recommend preregistered, pragmatic, multicenter trials embedded in real workflows, with harmonized core outcomes that prioritize safety/error metrics and interfaces that surface uncertainty and support verification.
使用大型语言模型(llm)的人类-人工智能协作(H + AI)为增强临床推理、文档和解释任务提供了一种有前途的方法。在PRISMA 2020 (PROSPERO注册号:CRD420251068272)之后,我们系统地比较了H + AI与纯人工(H)工作流,搜索了四个数据库,直到2025年6月28日。10项同行评审的研究符合资格标准,其中3份预印本仅为敏感性分析提供信息。诊断/解释准确率(k = 2)显示H + AI呈阳性趋势(风险比[RR] 1.59),但统计上不精确且不显著(95% CI 0.08至32.74),95%预测区间(PI)跨越零值。综合诊断/管理评分(k = 2)显示了统计学上显著的改善(平均差[MD] +4.88个百分点,95% CI + 0.65至+9.12),但PI(-31.65至41.42)表明现实世界的不确定性很高。时间效率(k = 3)无总体差异(MD + 0.4 min, 95%CI - 4.18 ~ +4.97; I²= 70.1%)。虽然文档质量提高了,但是事实错误率仍然很高(~ 26-36%),破坏了质量的提高。在三臂设置中,H + AI并不普遍优于AI。证据仍然是初步的,但高度不确定和依赖于上下文。我们建议在实际工作流程中嵌入预先注册的、实用的、多中心的试验,具有协调一致的核心结果,优先考虑安全/错误度量和显示不确定性并支持验证的接口。
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引用次数: 0
Prompt-mamba filtering networks for accurate hepatocellular carcinoma lesion segmentation in abdominal CT. 快速曼巴滤波网络用于腹部CT中肝癌病灶的准确分割。
IF 15.2 1区 医学 Q1 HEALTH CARE SCIENCES & SERVICES Pub Date : 2026-01-27 DOI: 10.1038/s41746-026-02371-5
Long Xia,Hai-Yang Chen,Ya-Wen Cao,Chen-Quan Gan,Jun-Zhang Zhao,Wei-Hua Zheng,Haiwen Jia,Shuai Jiang,Xuwang Li,Hua Li,Yi-Nuo Tu,Jun-Jing Zhang
Precise delineation of hepatocellular carcinoma (HCC) in abdominal CT is pivotal for early diagnosis and surgical planning, yet remains challenged by morphological heterogeneity, low contrast in small lesions, and scanner variability. To address these limitations, we propose Prompt-Mamba-AF, a framework tailored for robust HCC segmentation. Our method uniquely integrates anatomy-aware prompts to guide feature extraction within liver regions and leverages Mamba-based state-space modeling to capture long-range volumetric dependencies with linear complexity. Furthermore, we introduce structure-aware filtering to enforce topological consistency along lesion boundaries. Extensive validation on the LiTS, 3DIRCADb, and CHAOS benchmarks demonstrates that Prompt-Mamba-AF outperforms current state-of-the-art CNN and Transformer architectures. The model achieves leading Dice similarity and boundary accuracy while maintaining a compact parameter footprint (27.6M). Results indicate significant improvements in small nodule sensitivity and generalization across diverse imaging domains, positioning Prompt-Mamba-AF as an efficient solution for multi-center clinical workflows.
腹部CT对肝细胞癌(HCC)的精确描绘对早期诊断和手术计划至关重要,但形态学异质性、小病变低对比度和扫描仪可变性仍然是挑战。为了解决这些局限性,我们提出了一种为肝癌细分量身定制的框架——Prompt-Mamba-AF。我们的方法独特地集成了解剖感知提示,以指导肝脏区域内的特征提取,并利用基于mamba的状态空间建模来捕获具有线性复杂性的远程体积依赖关系。此外,我们引入了结构感知滤波来增强病变边界的拓扑一致性。对LiTS、3DIRCADb和CHAOS基准测试的广泛验证表明,Prompt-Mamba-AF优于当前最先进的CNN和Transformer架构。该模型在保持紧凑的参数占用空间(27.6M)的同时,实现了领先的Dice相似性和边界精度。结果表明,在不同的成像领域,小结节的敏感性和泛化性有了显著的提高,将Prompt-Mamba-AF定位为多中心临床工作流程的有效解决方案。
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引用次数: 0
Publisher Correction: Best practice recommendations and considerations for designing and electronically implementing event-driven diaries in clinical trials. 在临床试验中设计和电子实现事件驱动日记的最佳实践建议和考虑。
IF 15.1 1区 医学 Q1 HEALTH CARE SCIENCES & SERVICES Pub Date : 2026-01-27 DOI: 10.1038/s41746-026-02396-w
Florence D Mowlem, Jeremiah J Trudeau, Jill V Platko, Jos Bloemers, Emuella Flood, Jessica L Abel, Kelly Dumais, Paul O'Donohoe, Sabrina Grant, Ryan Naville-Cook, Onyekachukwu Illoh, Shannon D Keith, Jing Ju, Megan Fitter, Dorothee Oberdhan, Randall Winnette, Manuela Bossi, Naomi Suminski, Sonya Eremenco, Lindsay Hughes, Amy Fasiczka, Luisana Rojas, Michelle Campbell, Scottie Kern
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引用次数: 0
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