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Combined Silencing of VEGF-A and Angiopoietin-2, a More Effective Way to Inhibit the Ishikawa Endometrial Cancer Cell Line [Retraction]. 联合抑制血管内皮生长因子-A 和血管生成素-2,更有效地抑制石川子宫内膜癌细胞株 [撤回].
IF 2.7 4区 医学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-06-27 eCollection Date: 2024-01-01 DOI: 10.2147/OTT.S484231

[This retracts the article DOI: 10.2147/OTT.S194064.].

[这篇文章撤消了 DOI: 10.2147/OTT.S194064.]。
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引用次数: 0
Red Sea Sponge Callyspongia siphonella Extract Induced Growth Inhibition and Apoptosis in Breast MCF-7 and Hepatic HepG-2 Cancer Cell Lines in 2D and 3D Cell Cultures. 红海海绵 Callyspongia siphonella 提取物在二维和三维细胞培养中诱导乳腺癌 MCF-7 和肝癌 HepG-2 细胞株抑制生长和凋亡。
IF 2.7 4区 医学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-06-25 eCollection Date: 2024-01-01 DOI: 10.2147/OTT.S467083
Sana A Fadil, Fadwa A Aljoud, Ahmed R Yonbawi, Ahmad J Almalki, Rawan H Hareeri, Abrar Ashi, Mehal Atallah AlQriqri, Nada S Bawazir, Hadeel H Alshangiti, Lamiaa A Shaala, Diaa T A Youssef, Faris A Alkhilaiwi

Introduction: The increasing incidence of cancer diseases necessitates the urgent exploration of new bioactive compounds. One of the trends in drug discovery is marine sponges which is gaining significant support due to the abundant production of natural pharmaceutical compounds obtained from marine ecosystems. This study evaluates the anticancer properties of an organic extract from the Red Sea sponge Callyspongia siphonella (C. siphonella) on HepG-2 and MCF-7 cancer cell lines.

Methods: C. siphonella was collected, freeze-dried, and extracted using a methanol-dichloromethane mixture. The extract was analyzed via Liquid Chromatography-Mass Spectrometry. Cytotoxic effects were assessed through cell viability assays, apoptosis detection, cell cycle analysis, mitochondrial membrane potential assays, scratch-wound healing assays, and 3D cell culture assays.

Results: Fifteen compounds were identified in the C. siphonella extract. The extract showed moderate cytotoxicity against MCF-7 and HepG-2 cells, with IC50 values of 35.6 ± 6.9 μg/mL and 64.4 ± 8 μg/mL, respectively, after 48 hours of treatment. It induced cell cycle arrest at the G2/M phase in MCF-7 cells and the S phase in HepG-2 cells. Apoptosis increased significantly in both cell lines, accompanied by reduced mitochondrial membrane potential. The extract inhibited cell migration, with notable reductions after 24 and 48 hours. In 3D cell cultures, the extract had IC50 values of 5.1 ± 2 μg/mL for MCF-7 and 166.4 ± 27 μg/mL for HepG-2 after 7 days of treatment, showing greater potency in MCF-7 spheres compared to HepG-2 spheres.

Discussion and conclusion: The anticancer activity is attributed to the bioactive compounds. The C. siphonella extract's ability to induce apoptosis, disrupt mitochondrial membrane potential, and arrest the cell cycle highlights its potential as a novel anticancer agent. Additional research is required to investigate the underlying mechanism by which this extract functions as a highly effective anticancer agent.

简介随着癌症发病率的上升,人们迫切需要探索新的生物活性化合物。海洋海绵是药物发现的趋势之一,由于从海洋生态系统中获取的天然药物化合物产量丰富,海洋海绵正获得越来越多的支持。本研究评估了红海海绵 Callyspongia siphonella(C. siphonella)的有机提取物对 HepG-2 和 MCF-7 癌细胞系的抗癌特性:方法:采集 C. siphonella,冷冻干燥,然后用甲醇-二氯甲烷混合物提取。提取物通过液相色谱-质谱法进行分析。通过细胞活力测定、细胞凋亡检测、细胞周期分析、线粒体膜电位测定、划痕-伤口愈合测定和三维细胞培养测定来评估细胞毒性作用:结果:在虹吸虫提取物中发现了 15 种化合物。提取物对 MCF-7 和 HepG-2 细胞具有中等程度的细胞毒性,处理 48 小时后的 IC50 值分别为 35.6 ± 6.9 μg/mL 和 64.4 ± 8 μg/mL。它诱导 MCF-7 细胞的细胞周期停滞在 G2/M 期,HepG-2 细胞的细胞周期停滞在 S 期。两种细胞系的细胞凋亡都明显增加,同时线粒体膜电位降低。提取物抑制细胞迁移,24 小时和 48 小时后迁移率明显下降。在三维细胞培养中,经 7 天处理后,MCF-7 和 HepG-2 提取物的 IC50 值分别为 5.1 ± 2 μg/mL 和 166.4 ± 27 μg/mL,与 HepG-2 球形细胞相比,MCF-7 球形细胞的 IC50 值更高:抗癌活性归功于生物活性化合物。C.siphonella萃取物能够诱导细胞凋亡、破坏线粒体膜电位和阻滞细胞周期,这凸显了其作为新型抗癌剂的潜力。还需要进行更多的研究,以探究这种提取物发挥高效抗癌作用的内在机制。
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引用次数: 0
Impact of Combined Chemotherapy and Targeted Therapy on Pancreatic Neuroendocrine Carcinoma with Liver Metastasis: A Single-Center Modified Nomogram Analysis. 联合化疗和靶向治疗对肝转移胰腺神经内分泌癌的影响:单中心改良提名图分析
IF 2.7 4区 医学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-06-22 eCollection Date: 2024-01-01 DOI: 10.2147/OTT.S466213
Wenhao Luo, Hao Chen, Taiping Zhang

Objective: To establish a modified nomogram model for pancreatic neuroendocrine carcinoma (pNEC) patients with liver metastasis via single-center clinical data, and to provide guidelines for improving the diagnosis and treatment of patients.

Methods: A retrospective analysis of clinical data from pNEC patients with liver metastasis at Peking Union Medical College Hospital (January 2000 to November 2023) was conducted. Univariate and multivariate Cox regression analyses were employed to identify prognostic factors for overall survival (OS). Kaplan-Meier curves were generated, and a modified nomogram predictive model was developed to illustrate the prognosis of pNEC patients with liver metastasis. Calibration plots and C-index were used to validate the model's feasibility, accuracy, and reliability.

Results: Forty-five participants with the rare cancer type pNEC and liver metastasis were included in the study. Kaplan-Meier curves revealed that primary tumor resection (PTR), chemotherapy or targeted therapy, and tumor size equal to or less than 5cm significantly improved OS compared to those without PTR, chemotherapy or targeted therapy, and tumor size larger than 5cm. Multivariate Cox regression analysis identified PTR, a combination of chemotherapy and targeted therapy, and tumor size as independent prognostic factors for OS. The predictive nomogram model exhibited acceptable performance with a C-index of 0.744 (0.639-0.805) through bootstrapping.

Conclusion: Combining chemotherapy with targeted therapy enhances the survival of pNEC patients with liver metastasis. The modified nomogram model and predictive score table offer valuable references and insights for both clinicians and patients.

目的通过单中心临床数据建立胰腺神经内分泌癌(pNEC)肝转移患者的改良提名图模型,为改善患者的诊断和治疗提供指导:方法:对北京协和医院(2000 年 1 月至 2023 年 11 月)肝转移 pNEC 患者的临床数据进行回顾性分析。采用单变量和多变量 Cox 回归分析确定总生存期(OS)的预后因素。生成了 Kaplan-Meier 曲线,并建立了改良的提名图预测模型,以说明有肝转移的 pNEC 患者的预后情况。校准图和C指数用于验证模型的可行性、准确性和可靠性:研究共纳入了 45 名患有罕见癌症类型 pNEC 并有肝转移的患者。Kaplan-Meier曲线显示,与未进行原发肿瘤切除术(PTR)、化疗或靶向治疗以及肿瘤大小等于或小于5厘米的患者相比,肿瘤大小大于或等于5厘米的患者的OS明显改善。多变量考克斯回归分析发现,PTR、化疗和靶向治疗的组合以及肿瘤大小是OS的独立预后因素。通过引导分析,预测提名图模型表现出可接受的性能,C指数为0.744(0.639-0.805):结论:化疗与靶向治疗相结合可提高肝转移 pNEC 患者的生存率。修改后的提名图模型和预测评分表为临床医生和患者提供了有价值的参考和启示。
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引用次数: 0
Downregulation of MMSET Impairs Breast Cancer Proliferation and Metastasis Through Inhibiting Wnt/β-Catenin Signaling [Retraction]. 通过抑制 Wnt/β-Catenin 信号,下调 MMSET 可抑制乳腺癌的增殖和转移 [撤回]。
IF 2.7 4区 医学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-06-21 eCollection Date: 2024-01-01 DOI: 10.2147/OTT.S483240

[This retracts the article DOI: 10.2147/OTT.S196430.].

[本文撤回了文章 DOI:10.2147/OTT.S196430]。
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引用次数: 0
Combined Dacomitinib and Selpercatinib Treatment for a Patient with EGFR-Mutant Non-Small Cell Lung Cancer and Acquired CCDC6-RET Fusion. 达科米替尼和赛乐替尼联合治疗一名表皮生长因子受体突变非小细胞肺癌和获得性CCDC6-RET融合的患者
IF 2.7 4区 医学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-06-18 eCollection Date: 2024-01-01 DOI: 10.2147/OTT.S470946
Cheng-Yin Liu, Chia-Hsin Liu

RET rearrangements are recognized drivers in lung cancer, representing a small subset (1-2%) of non-small cell lung cancer (NSCLC). Additionally, RET fusions also serve as a rare acquired resistance mechanism in EGFR-mutant NSCLC. Only a few NSCLC cases have been reported with co-occurrence of EGFR mutations and RET fusions as an acquired resistance mechanism induced by EGFR-tyrosine kinase inhibitors (TKIs). A 68-year-old man diagnosed with lung adenocarcinoma harboring EGFR L858R mutation initially responded well to dacomitinib, a second-generation EGFR-tyrosine kinase inhibitor (TKI). Afterward, he developed acquired resistance accompanied by a RET rearrangement. Next-generation sequencing (NGS) analysis revealed that the tumor possessed both the new CCDC6-RET fusion and the EGFR L858R mutation. Subsequently, he was treated with a combination of cisplatin, pemetrexed, and bevacizumab resulting in a partial response. Nevertheless, his condition deteriorated as the disease progressed, manifesting as hydrocephalus, accompanied by altered consciousness and lower limb weakness. The subsequent combined treatment with dacomitinib and selpercatinib resulted in a significant improvement in neurological symptoms. Here, we first identified acquired CCDC6-RET fusion with a coexisting EGFR L858R mutation following dacomitinib treatment. Our findings highlight the importance of NGS for identifying RET fusions and suggest the potential combination of dacomitinib and selpercatinib to overcome this resistance. For NSCLC patients with RET rearrangements and no access to RET inhibitors, pemetrexed-based chemotherapy provides a feasible alternative.

RET 重排是公认的肺癌驱动因素,在非小细胞肺癌(NSCLC)中只占一小部分(1-2%)。此外,在表皮生长因子受体突变的 NSCLC 中,RET 融合也是一种罕见的获得性耐药机制。仅有少数NSCLC病例报道了表皮生长因子受体突变和RET融合同时存在,这是表皮生长因子受体-酪氨酸激酶抑制剂(TKIs)诱导的获得性耐药机制。一名68岁的男性被诊断出患有肺腺癌,并携带表皮生长因子受体(EGFR)L858R突变,起初他对第二代表皮生长因子受体-酪氨酸激酶抑制剂(TKI)达科米替尼反应良好。之后,他出现了伴有RET重排的获得性耐药。下一代测序(NGS)分析表明,肿瘤同时具有新的CCDC6-RET融合和表皮生长因子受体L858R突变。随后,他接受了顺铂、培美曲塞和贝伐单抗的联合治疗,结果获得了部分应答。然而,随着病情的发展,他的病情恶化,表现为脑积水,并伴有意识改变和下肢无力。随后,达科米替尼和舍佩卡替尼联合治疗后,神经系统症状明显改善。在此,我们首次发现了达科米替尼治疗后获得性CCDC6-RET融合,并同时存在表皮生长因子受体(EGFR)L858R突变。我们的研究结果凸显了 NGS 在识别 RET 融合方面的重要性,并表明达科米替尼和舍铂替尼有可能联合用于克服这种耐药性。对于有RET重排且无法使用RET抑制剂的NSCLC患者,基于培美曲塞的化疗提供了一种可行的替代方案。
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引用次数: 0
Prolonged Clinical Benefit with Futibatinib in a Patient with FGFR Inhibitor-Pretreated FGFR2 Fusion-Positive Intrahepatic Cholangiocarcinoma: Case Report. FGFR抑制剂治疗FGFR2融合阳性肝内胆管癌患者使用富替巴替尼可延长临床获益时间:病例报告
IF 4 4区 医学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-06-13 eCollection Date: 2024-01-01 DOI: 10.2147/OTT.S434449
Paolo D d'Arienzo, Alan R MacDonald, Virjen Patel, Yuk T Ma, Rille Pihlak, Naureen Starling

Multiple FGFR inhibitors have demonstrated significant activity in pretreated advanced FGFR2 fusion-positive intrahepatic cholangiocarcinoma. The irreversible pan-FGFR inhibitor futibatinib has the potential to overcome acquired resistance to ATP-competitive FGFR inhibitors in a subset of patients. We present a case of prolonged clinical benefit using FGFR inhibitors sequentially, initially an ATP-competitive inhibitor followed by futibatinib upon progression, for a total of 36 months of FGFR-targeting therapy. This case supports sequential FGFR-targeting therapies for FGFR2 fusion-positive cholangiocarcinoma, with futibatinib acting as rescue therapy after failure of ATP-competitive inhibitors.

多种表皮生长因子受体(FGFR)抑制剂已在预处理的晚期FGFR2融合阳性肝内胆管癌中显示出显著活性。不可逆的泛FGFR抑制剂futibatinib有可能克服一部分患者对ATP竞争性FGFR抑制剂的获得性耐药性。我们介绍了一例连续使用 FGFR 抑制剂的长期临床获益病例,最初使用 ATP 竞争性抑制剂,然后在病情进展时使用富替巴替尼,共进行了 36 个月的 FGFR 靶向治疗。该病例支持对FGFR2融合阳性胆管癌采用连续的FGFR靶向疗法,在ATP竞争性抑制剂治疗失败后使用富替巴替尼作为挽救疗法。
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引用次数: 0
Different Role of TRF1 and TRF2 Expression in Non-Small Cell Lung Cancers TRF1 和 TRF2 在非小细胞肺癌中的不同作用
IF 4 4区 医学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-06-04 DOI: 10.2147/ott.s461430
Mincheol Chae, Jae-Ho Lee, Jong Ho Park, Dong Yoon Keum, Hanna Jung, Youngok Lee, Deok Heon Lee
Background: TRF1, TRF2, and TERT (Telomerase reverse transcriptase) are telomere-associated factors that regulate telomere length. Genetic changes in these genes may be associated with cancer pathogenesis; however, this relationship has not yet been comprehensively elucidated in lung cancer.
Aim: : Exploring the clinicopathologic and prognostic values of TRF1, TRF2, and TERT mRNA expression in non-small cell lung cancers (NSCLC).
Methods: : The clinical significance of TRF1, TRF2, and TERT expression in 141 patients with NSCLC was investigated. Additionally, these findings were supported by the open big data from The Cancer Genome Atlas (TCGA).
Results: : TRF1 and TRF2 expression levels tended to be associated with smoking, and TERT expression was positively correlated with age. The survival analysis showed that TRF1 expression predicted a better prognosis for squamous cell carcinoma (SCC), whereas TRF2 expression was associated with a shorter survival in adenocarcinoma. TCGA data also showed a better prognosis for SCC with TRF1 expression. However, the TRF2 results were not in agreement with our data.
Conclusions: : We present the clinical and prognostic values of TRF1, TRF2, and TERT expression in NSCLC tissues and TCGA. Our findings suggest that TRF1 expression is a possible prognostic marker for NSCLC, particularly SCC.

背景:TRF1、TRF2和TERT(端粒酶逆转录酶)是调节端粒长度的端粒相关因子。这些基因的遗传变化可能与癌症发病机制有关;然而,这种关系在肺癌中尚未得到全面阐明:探索 TRF1、TRF2 和 TERT mRNA 表达在非小细胞肺癌(NSCLC)中的临床病理和预后价值:方法:研究了141例NSCLC患者中TRF1、TRF2和TERT表达的临床意义。此外,这些发现还得到了癌症基因组图谱(TCGA)开放大数据的支持:结果:TRF1和TRF2的表达水平往往与吸烟有关,TERT的表达与年龄呈正相关。生存分析表明,TRF1的表达预示着鳞状细胞癌(SCC)的预后较好,而TRF2的表达则与腺癌的较短生存期有关。TCGA数据也显示,TRF1表达的SCC预后较好。然而,TRF2的结果与我们的数据并不一致:我们介绍了TRF1、TRF2和TERT在NSCLC组织和TCGA中表达的临床和预后价值。我们的研究结果表明,TRF1的表达可能是NSCLC,尤其是SCC的预后标志物。
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引用次数: 0
The Role and Mechanism of the Histone Methyltransferase G9a in Tumors: Update 组蛋白甲基转移酶 G9a 在肿瘤中的作用和机制最新进展
IF 4 4区 医学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-05-30 DOI: 10.2147/ott.s451108
Hangsheng Zhou, Jiandong Gui, Lijie Zhu, Yuanyuan Mi
Abstract: Methylation-mediated gene silencing is closely related to the occurrence and development of human tumors. The euchromatic histone lysine methyltransferase 2 (EHMT2, also known as G9a) is highly expressed in many tumors and is generally considered to be an oncogene, which is associated with the poor outcome of many tumors. Combined immunotherapy and immune checkpoint blockade therapy also have good efficacy and certain safety. However, there are still many difficulties in the drugs targeting G9a, and the combined effect and safety of G9a with many drugs is still under study. This article aims to summarize the role and mechanism of G9a and its inhibitors in tumors in the past two years, and to understand the application prospect of G9a from the perspective of diagnosis and treatment.

Keywords: cancer, G9a, methyltransferase, function, mechanism
摘要:甲基化介导的基因沉默与人类肿瘤的发生和发展密切相关。半色素组蛋白赖氨酸甲基转移酶2(EHMT2,又称G9a)在许多肿瘤中高表达,被普遍认为是一种癌基因,与许多肿瘤的不良预后有关。联合免疫疗法和免疫检查点阻断疗法也具有良好的疗效和一定的安全性。然而,针对G9a的药物仍存在诸多难点,G9a与多种药物的联合作用及安全性仍在研究之中。本文旨在总结近两年来G9a及其抑制剂在肿瘤中的作用和机制,并从诊断和治疗的角度了解G9a的应用前景。关键词:肿瘤;G9a;甲基转移酶;功能;机制
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引用次数: 0
Characterization of Patients with EGFR Mutation-Positive NSCLC Following Emergence of the Osimertinib Resistance Mutations, L718Q or G724S: A Multicenter Retrospective Observational Study in France 奥希替尼耐药突变 L718Q 或 G724S 出现后表皮生长因子受体突变阳性 NSCLC 患者的特征:法国一项多中心回顾性观察研究
IF 4 4区 医学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-05-29 DOI: 10.2147/ott.s448909
Mateo Sanchis-Borja, Florian Guisier, Aurélie Swalduz, Hubert Curcio, Victor Basse, Christophe Maritaz, Christos Chouaid, Jean-Bernard Auliac
Purpose: The third-generation epidermal growth factor receptor (EGFR) tyrosine kinase inhibitor (TKI), osimertinib, is an effective first-line therapy for patients with common EGFR mutation-positive non-small cell lung cancer (NSCLC). However, almost all patients become resistant to treatment. In some patients, emergence of tertiary EGFR mutations is implicated as a resistance mechanism. This study describes patients with NSCLC who acquired the rare EGFR mutations, L718Q or G724S, following EGFR TKI treatment.
Patients and Methods: This was a retrospective, observational study undertaken in France from Feb–Nov 2021, in patients with EGFR mutation-positive NSCLC with an acquired L718Q or G724S mutation. Primary objectives were description of tumor characteristics, progression, and progression under treatment.
Results: Nine eligible patients were identified. Acquired resistance to initial EGFR TKI treatment was associated with T790M emergence in six patients, who then received osimertinib monotherapy. Overall, eight patients received osimertinib monotherapy treatment at some point (average treatment duration: 18.3 months). Following the emergence of L718Q or G724S, patients received chemotherapy (n = 4; two of whom subsequently received afatinib), nivolumab (n = 2), afatinib (n = 2), or immunochemotherapy (n = 1). In the four patients who received afatinib after identification of L718Q or G724S, 2 achieved a partial response, one had stable disease and one had progressive disease. Treatment duration was 1.6– 31.7 months. In patients with controlled disease (n = 3), progression-free survival was 6.1– 31.7 months. Two of these patients had previously received osimertinib.
Conclusion: Currently, there is no consensus regarding the treatment of EGFR mutation-positive NSCLC following emergence of the osimertinib resistance mutations, L718Q or G724S. Afatinib appears to be a promising treatment option in this setting.

Keywords: osimertinib, afatinib, real-world evidence, tertiary EGFR mutations
目的:第三代表皮生长因子受体(EGFR)酪氨酸激酶抑制剂(TKI)奥西莫替尼是治疗常见EGFR突变阳性非小细胞肺癌(NSCLC)患者的有效一线疗法。然而,几乎所有患者都会对治疗产生耐药性。在一些患者中,表皮生长因子受体三级突变的出现被认为是一种耐药机制。本研究描述了在接受表皮生长因子受体 TKI 治疗后获得罕见表皮生长因子受体突变 L718Q 或 G724S 的 NSCLC 患者:这是一项回顾性观察研究,于2021年2月至11月在法国进行,研究对象为获得L718Q或G724S突变的表皮生长因子受体突变阳性NSCLC患者。研究的主要目的是描述肿瘤特征、病情进展和治疗进展:结果:确定了九名符合条件的患者。6名患者对最初的表皮生长因子受体TKI治疗获得性耐药与T790M的出现有关,这些患者随后接受了奥希替尼单药治疗。总体而言,八名患者在某一阶段接受了奥希替尼单药治疗(平均治疗时间:18.3个月)。出现L718Q或G724S后,患者接受了化疗(4例;其中2例随后接受了阿法替尼治疗)、nivolumab(2例)、阿法替尼(2例)或免疫化疗(1例)。在确定L718Q或G724S后接受阿法替尼治疗的4名患者中,2人获得部分应答,1人病情稳定,1人病情进展。治疗持续时间为 1.6-31.7 个月。在病情得到控制的患者中(n = 3),无进展生存期为 6.1-31.7 个月。其中两名患者曾接受过奥希替尼治疗:目前,对于出现奥希替尼耐药突变(L718Q或G724S)后如何治疗表皮生长因子受体突变阳性的NSCLC尚未达成共识。在这种情况下,阿法替尼似乎是一种很有前景的治疗选择。关键词:奥西美替尼;阿法替尼;真实世界证据;EGFR三级突变
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引用次数: 0
Identification and Validation of Nicotinamide Metabolism-Related Gene Signatures as a Novel Prognostic Model for Hepatocellular Carcinoma 烟酰胺代谢相关基因特征的鉴定和验证作为肝细胞癌的新型预后模型
IF 4 4区 医学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-05-28 DOI: 10.2147/ott.s464709
Sijia Yang, Ang Li, Lihong Lv, Jinxin Duan, Zhihua Zheng, Wenfeng Zhuo, Jun Min, Jinxing Wei
Background: Nicotinamide (NAM+) regulates redox and metabolic activities in the mitochondria. The intention of the research was to identify key genes that relate to nicotinamide in hepatocellular carcinoma (HCC).
Methods: Relevant clinical information were collected as well as RNA-seq data using the Cancer Genome Atlas (TCGA) database. Differential analysis was used to discover the genes that were differently expressed. On the key genes associated with NAM, functional enrichment analysis was carried out. Next, receiver operating characteristic (ROC) and prognosis Kaplan-Meier (K-M) curve analyses were used to evaluate the importance of important gene expression, respectively. The immune cell signatures were estimated using the CIBERSORT algorithm. Finally, the anticancer impact of NAM on HCC was experimentally confirmed, and important genes NADSYN1 and NT5C were validated at the protein level in clinical specimens.
Results: Six prognostic key genes (NAXE, NADSYN1, NT5C, NT5C3A, PNP and NT5E) were identified. There is an association between the level of key gene expression and the clinical prognosis. Four key genes (NAXE, NADSYN1, NT5C and NT5C3A) have statistical significance of survival prognosis. Finally, the expression of NAM-related genes and the inhibitory effect of NAM on HCC were verified by experiments.
Conclusion: The study first found some Nicotinamide metabolism-related differentially expressed genes (NMRDEGs) that are related to HCC can contribute to predicting survival and monitoring the treatment.

背景:烟酰胺(NAM+)调节线粒体中的氧化还原和代谢活动。该研究旨在确定肝细胞癌(HCC)中与烟酰胺相关的关键基因:方法:利用癌症基因组图谱(TCGA)数据库收集相关临床信息和RNA-seq数据。差异分析用于发现表达不同的基因。对与 NAM 相关的关键基因进行了功能富集分析。然后,分别使用接收者操作特征(ROC)和预后卡普兰-梅耶(K-M)曲线分析来评估重要基因表达的重要性。使用 CIBERSORT 算法估算了免疫细胞特征。最后,实验证实了NAM对HCC的抗癌作用,并从蛋白水平验证了临床标本中的重要基因NADSYN1和NT5C:结果:发现了六个预后关键基因(NAXE、NADSYN1、NT5C、NT5C3A、PNP 和 NT5E)。关键基因的表达水平与临床预后有关。4个关键基因(NAXE、NADSYN1、NT5C和NT5C3A)对生存预后有统计学意义。最后,通过实验验证了NAM相关基因的表达以及NAM对HCC的抑制作用:该研究首次发现了一些与HCC相关的烟酰胺代谢相关差异表达基因(NMRDEGs),有助于预测生存率和监测治疗效果。
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引用次数: 0
期刊
OncoTargets and therapy
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