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Limitations of short-read NGS in detecting RP1 Alu insertions: a case emphasizing Sanger confirmation. 短读NGS检测RP1 Alu插入的局限性:一个强调Sanger确认的案例。
IF 1 4区 医学 Q4 GENETICS & HEREDITY Pub Date : 2025-11-25 DOI: 10.1080/13816810.2025.2590162
Takaaki Hayashi, Kei Mizobuchi, Natsuki Higa, Hiroko Maki, Kazuki Kuniyoshi, Yuichi Ikeda, Mineo Kondo, Hirotomo Saitsu

Purpose: To assess the detectability of the pathogenic RP1 Alu insertion using the PrismGuide™ inherited retinal dystrophy (IRD) panel, which targets 82 IRD genes, and whole-exome sequencing (WES).

Methods: A girl diagnosed with early-onset retinitis pigmentosa at age 7 underwent IRD panel testing and WES at age 15. Sequencing data from both platforms were evaluated using standard automated pipelines and manually reviewed with the Integrative Genomics Viewer (IGV). PCR and Sanger sequencing were performed for confirmation.

Results: Automated pipelines for both the IRD panel and WES failed to detect any reportable pathogenic variants. However, IGV review revealed a markedly reduced read coverage within exon 4 of RP1 in both datasets, suggesting the homozygous Alu insertion. PCR and Sanger sequencing confirmed the presence of the insertion. Thus, both short-read sequencing approaches failed to identify the variant.

Conclusions: Short-read sequencing technologies, including the IRD panel and WES, have limitations in detecting short interspersed nuclear elements such as the RP1 Alu insertion. This case emphasizes the importance of manual IGV review and the necessity of confirmatory Sanger sequencing when such structural variants are suspected despite negative automated analyses.

目的:利用针对82个IRD基因的PrismGuide™遗传性视网膜营养不良(IRD)面板和全外显子组测序(WES),评估致病性RP1 Alu插入的可检测性。方法:一名7岁时被诊断为早发性视网膜色素变性的女孩在15岁时接受了IRD面板测试和WES。来自两个平台的测序数据使用标准的自动化管道进行评估,并使用整合基因组学查看器(IGV)进行人工审查。采用PCR和Sanger测序进行确认。结果:IRD面板和WES的自动化管道都未能检测到任何可报告的致病变异。然而,IGV审查显示,在两个数据集中RP1的外显子4内的读取覆盖率显著降低,表明纯合Alu插入。PCR和Sanger测序证实了插入的存在。因此,两种短读测序方法都未能识别该变异。结论:包括IRD面板和WES在内的短读测序技术在检测RP1 Alu插入等短穿插核元素方面存在局限性。该病例强调了人工IGV检查的重要性,以及当怀疑这种结构变异时,尽管自动分析阴性,但仍有必要进行确认性Sanger测序。
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引用次数: 0
A family with Knobloch syndrome. 一个患有诺布洛赫综合症的家庭。
IF 1 4区 医学 Q4 GENETICS & HEREDITY Pub Date : 2025-11-24 DOI: 10.1080/13816810.2025.2592845
Nora Fettinger, Meghan DeBenedictis, Jonathan Sears, Elias I Traboulsi
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引用次数: 0
IDH3A-related retinal dystrophy with bilateral macular pseudocoloboma in a 2-month-old infant. idh3a相关视网膜营养不良伴双侧黄斑假性结肠瘤1例2月龄婴儿。
IF 1 4区 医学 Q4 GENETICS & HEREDITY Pub Date : 2025-11-18 DOI: 10.1080/13816810.2025.2590165
Eleftheria P Mavridou, Anna Mourgela, Margarita Papadopoulou, Agathi Kouri

Background: Among the genes implicated in inherited retinal degenerations (IRDs), disease-causing variants in IDH3A have recently been reported, although they remain exceedingly rare. In some cases, these variants are associated with macular pseudocoloboma. IDH3A encodes the alpha subunit of the mitochondrial NAD+-dependent isocitrate dehydrogenase 3 (IDH3) complex, a key enzyme in the tricarboxylic acid (TCA) cycle.

Methods: Ophthalmic examination and whole-exome sequencing.

Results: We report the case of a 2-month-old female infant presenting with bilateral macular pseudocoloboma. Clinical examination showed age-appropriate visual behavior. Fundoscopy revealed well-defined atrophic lesions in the macula, retinal pigment epithelium (RPE) changes and vascular narrowing in both eyes. Whole-exome sequencing revealed that the patient appears to be homozygous for the NM_005530.3(IDH3A):c.364G>A (p.Ala122Thr) variant.

Conclusion: To our knowledge, this is the youngest reported patient with IDH3A-associated retinal dystrophy presenting with macular pseudocoloboma and expands the phenotypic spectrum of this disease.

背景:在与遗传性视网膜变性(IRDs)相关的基因中,IDH3A的致病变异最近被报道,尽管它们仍然非常罕见。在某些情况下,这些变异与黄斑假结肠有关。IDH3A编码线粒体NAD+依赖性异柠檬酸脱氢酶3 (IDH3)复合体的α亚基,该复合体是三羧酸(TCA)循环中的关键酶。方法:眼科检查和全外显子组测序。结果:我们报告一个2个月大的女婴表现为双侧黄斑假结肠瘤。临床检查显示与年龄相符的视觉行为。眼底镜检查显示黄斑明显萎缩性病变,视网膜色素上皮(RPE)改变,双眼血管狭窄。全外显子组测序显示,该患者似乎是NM_005530.3(IDH3A)的纯合子:c。364G>A (p.Ala122Thr)改型。结论:据我们所知,这是报道的最年轻的idh3a相关性视网膜营养不良患者,表现为黄斑假性结肠瘤,扩大了该疾病的表型谱。
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引用次数: 0
Compound genetic burden in oculo-facio-cardio-dental (OFCD) syndrome: surgical risk stratification with co-occurring BCOR and MYLK mutations. 眼-面-心-牙(OFCD)综合征的复合遗传负担:伴有BCOR和MYLK突变的手术风险分层
IF 1 4区 医学 Q4 GENETICS & HEREDITY Pub Date : 2025-11-14 DOI: 10.1080/13816810.2025.2582609
Sujin Kang, Alejandro M Perez, Carson Smith, Ta Chen Chang, Guney Bademci

Introduction: Oculo-facio-cardio-dental (OFCD) syndrome is a rare X-linked dominant disorder caused by pathogenic BCOR variants and characterized by congenital cataracts, microcornea, and secondary glaucoma. Multilocus pathogenic variation (MPV), in which independent variants contribute to disease burden, can further complicate syndromic presentations and alter surgical planning. This case highlights the importance of longitudinal genetic evaluation in complex ophthalmic disease.

Methods: Comprehensive ophthalmic evaluation, multimodal imaging, and systemic assessment were performed. Trio exome sequencing was used as part of the genetic diagnostic work-up. Standard preoperative cardiovascular imaging was completed before planned glaucoma surgery.

Results: A 15-year-old female with OFCD exhibited congenital cataracts, bilateral microcornea, and persistent secondary glaucoma requiring multiple interventions. Trio exome sequencing confirmed a de novo pathogenic BCOR mutation and identified a paternally inherited pathogenic MYLK variant associated with thoracic aortic aneurysm and dissection. Although initially cleared for glaucoma surgery, routine preoperative screening revealed progressive ascending aortic dilation linked to the MYLKM variant, leading to postponement of ocular surgery due to increased anesthetic risk.

Discussion: This case demonstrates how MPV can significantly influence ophthalmic surgical decision-making. Genetic findings initially considered secondary became critical as cardiovascular risk evolved. Multidisciplinary coordination between ophthalmology and genetics is essential to integrate evolving genomic insights into perioperative care and ensure optimal patient safety.

眼-面-心-牙(OFCD)综合征是一种罕见的x连锁显性疾病,由致病性BCOR变异引起,以先天性白内障、小角膜和继发性青光眼为特征。多位点致病变异(MPV),其中独立变异有助于疾病负担,可进一步使综合征表现复杂化并改变手术计划。本病例强调了纵向遗传评估在复杂眼病中的重要性。方法:进行眼科综合评价、多模态成像及系统评价。三人外显子组测序被用作遗传诊断工作的一部分。在计划青光眼手术前完成标准术前心血管成像。结果:一名15岁的女性OFCD患者表现为先天性白内障、双侧小角膜和持续性继发性青光眼,需要多次干预。三人外显子组测序证实了一种新的致病性BCOR突变,并鉴定出一种与胸主动脉瘤和夹层相关的父系遗传致病性MYLK变异。虽然最初清除了青光眼手术,常规术前筛查显示进行性升主动脉扩张与MYLKM变异相关,导致由于麻醉风险增加而推迟眼部手术。讨论:本病例表明MPV如何显著影响眼科手术决策。随着心血管风险的演变,最初被认为是次要的遗传发现变得至关重要。眼科和遗传学之间的多学科协调对于将不断发展的基因组见解整合到围手术期护理和确保最佳患者安全至关重要。
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引用次数: 0
Multimodal imaging of RCBTB1-associated retinal dystrophy. rcbtb1相关视网膜营养不良的多模态成像。
IF 1 4区 医学 Q4 GENETICS & HEREDITY Pub Date : 2025-10-29 DOI: 10.1080/13816810.2025.2578382
Denise Yang-Seeger, Inga-Maria Hoppert, Yevgeniya Atiskova, Martin S Spitzer, Johannes Birtel

Introduction: Variants in the RCBTB1 gene have recently been described in patients with inherited retinal disease; so far, there is limited knowledge about this entity, differential diagnoses, and disease progression. Here, we report a novel splice variant in RCBTB1 and describe the associated retinopathy.

Methods: Clinical assessment included multimodal imaging with optical coherence tomography, blue-light fundus autofluorescence, and near-infrared fundus autofluorescence. Atrophy progression was evaluated over time. Genetic testing was conducted by next-generation sequencing, pathogenicity was assessed by in silico analysis.

Results: A 54-year-old woman presented with a best-corrected visual acuity of 20/50 in the right and 20/63 in the left eye, respectively. Fundus examination showed macular and peripapillary atrophy with foveal sparing, as well as granular alterations extending to the mid-peripheral retina. Genetic testing revealed a novel splice variant (c.1325-2A>G) in intron 11 of RCBTB1.

Discussion: We confirm that RCBTB1-associated retinal dystrophy shares phenotypic similarities with mitochondrial retinopathy. Multimodal retinal imaging is vital to assess disease progression and may facilitate a better understanding of this pathology.

简介:RCBTB1基因的变异最近在遗传性视网膜疾病患者中被描述;到目前为止,关于这个实体、鉴别诊断和疾病进展的知识有限。在这里,我们报告了一种新的RCBTB1剪接变异,并描述了相关的视网膜病变。方法:临床评价包括光学相干断层扫描、蓝光眼底自体荧光和近红外眼底自体荧光多模态成像。随时间评估萎缩进展。基因检测采用新一代测序,致病性采用计算机分析。结果:54岁女性,右眼最佳矫正视力为20/50,左眼最佳矫正视力为20/63。眼底检查显示黄斑和乳头周围萎缩,中央凹保留,以及颗粒状改变延伸到中周视网膜。基因检测发现RCBTB1的内含子11中存在一个新的剪接变异(c.1325-2A>G)。讨论:我们证实rcbtb1相关的视网膜营养不良与线粒体视网膜病变具有表型相似性。多模态视网膜成像对评估疾病进展至关重要,可能有助于更好地理解这种病理。
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引用次数: 0
Diffuse corneal haze: a rare presentation of fish-eye disease. 弥漫性角膜混浊:罕见的鱼眼病表现。
IF 1 4区 医学 Q4 GENETICS & HEREDITY Pub Date : 2025-10-28 DOI: 10.1080/13816810.2025.2576783
Brandon C Huynh, Gurkaran S Sarohia, Matthew D Benson, Khaliq Kurji

Introduction: Fish-eye disease (FED) is a rare, autosomal recessive genetic disorder that can present at any age, from as early as the second decade of life to late adulthood. The hallmark clinical manifestation of FED is dyslipidemia and slowly progressive bilateral corneal opacification, which can impair vision quality due to highly elevated straylight. Here, we report the ophthalmic findings observed in FED by presenting a case that had been misdiagnosed for years until genetic testing was performed.

Methods: Case report.

Results: A 50-year-old patient presented with a 30-year history of subnormalvision, which had progressively worsened over the past two years, accompanied by intermittent episodes of bilateral ocular dryness. Ophthalmic examination revealed diffuse corneal haze despiterelatively well-preserved visual acuity. Anterior segment-opticalcoherence tomography (AS-OCT) imaging showed multiple areas of hyperreflective opacities bilaterally throughout the corneal stroma. A lipid panel revealed very low plasma high-density lipoproteincholesterol (HDL-C) levels. Subsequent genetic testing provided an explanation, identifying two novel variants in the LCAT gene, c.840_862dup, p.(Val288Alafs *130) and c.115A > T, p(Lys39*).

Conclusion: Ultimately, FED should be considered in the differential diagnosis of corneal clouding combined with low plasma HDL-C, which can be investigated using AS-OCT and confirmed through genetic interrogation of the LCAT gene.

鱼眼病(FED)是一种罕见的常染色体隐性遗传疾病,可以出现在任何年龄,从早在生命的第二个十年到成年晚期。FED的标志性临床表现为血脂异常和缓慢进行性双侧角膜混浊,由于高度升高的杂散光可损害视力质量。在这里,我们报告眼科发现观察到的联邦提出了一个病例,误诊多年,直到基因检测进行。方法:病例报告。结果:一个50岁的病人提出了30年的亚正常视力的历史,这是在过去的两年逐渐恶化,并伴有间歇性发作的双侧眼睛干燥。眼科检查发现弥漫性角膜混浊,视力保存较好。前段光学相干断层扫描(AS-OCT)成像显示双侧角膜基质中多处高反射性混浊。脂质检查显示血浆高密度脂蛋白胆固醇(HDL-C)水平非常低。随后的基因检测提供了解释,鉴定出LCAT基因的两个新变体,c.840_862dup, p.(Val288Alafs *130)和c.115A > T, p(Lys39*)。结论:在角膜混浊合并低血浆HDL-C的鉴别诊断中,最终应考虑到FED,可通过AS-OCT进行研究,并通过LCAT基因的遗传询问进行确认。
{"title":"Diffuse corneal haze: a rare presentation of fish-eye disease.","authors":"Brandon C Huynh, Gurkaran S Sarohia, Matthew D Benson, Khaliq Kurji","doi":"10.1080/13816810.2025.2576783","DOIUrl":"10.1080/13816810.2025.2576783","url":null,"abstract":"<p><strong>Introduction: </strong>Fish-eye disease (FED) is a rare, autosomal recessive genetic disorder that can present at any age, from as early as the second decade of life to late adulthood. The hallmark clinical manifestation of FED is dyslipidemia and slowly progressive bilateral corneal opacification, which can impair vision quality due to highly elevated straylight. Here, we report the ophthalmic findings observed in FED by presenting a case that had been misdiagnosed for years until genetic testing was performed.</p><p><strong>Methods: </strong>Case report.</p><p><strong>Results: </strong>A 50-year-old patient presented with a 30-year history of subnormalvision, which had progressively worsened over the past two years, accompanied by intermittent episodes of bilateral ocular dryness. Ophthalmic examination revealed diffuse corneal haze despiterelatively well-preserved visual acuity. Anterior segment-opticalcoherence tomography (AS-OCT) imaging showed multiple areas of hyperreflective opacities bilaterally throughout the corneal stroma. A lipid panel revealed very low plasma high-density lipoproteincholesterol (HDL-C) levels. Subsequent genetic testing provided an explanation, identifying two novel variants in the <i>LCAT</i> gene, c.840_862dup, p.(Val288Alafs *130) and c.115A > T, p(Lys39*).</p><p><strong>Conclusion: </strong>Ultimately, FED should be considered in the differential diagnosis of corneal clouding combined with low plasma HDL-C, which can be investigated using AS-OCT and confirmed through genetic interrogation of the <i>LCAT</i> gene.</p>","PeriodicalId":19594,"journal":{"name":"Ophthalmic Genetics","volume":" ","pages":"1-4"},"PeriodicalIF":1.0,"publicationDate":"2025-10-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145392043","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Branch retinal vein occlusion as a manifestation of systemic vasculopathy in CADASIL: a multimodal imaging case report. 视网膜分支静脉闭塞作为CADASIL全身性血管病变的表现:一份多模态成像病例报告。
IF 1 4区 医学 Q4 GENETICS & HEREDITY Pub Date : 2025-10-19 DOI: 10.1080/13816810.2025.2573846
Figen Bezci Aygun, Ceren Özkorkmaz, Sibel Kadayıfcılar

Background: Cerebral autosomal dominant arteriopathy with subcortical infarcts and leukoencephalopathy (CADASIL) is a hereditary small vessel disease caused by mutations in the NOTCH3 gene. While it predominantly affects cerebral arterioles, emerging evidence indicates systemic vascular involvement. Ocular manifestations, particularly venous abnormalities such as branch retinal vein occlusion (BRVO), are exceedingly rare and not well characterized in CADASIL.

Case presentation: We report a case of a 63-year-old male presenting with decreased vision and floaters in the left eye. Multimodal imaging revealed macular edema, intraretinal hemorrhages, and superior temporal BRVO. Systemic risk factors were excluded. Genetic testing confirmed heterozygous pathogenic NOTCH3 variant c.317G>A (p.Cys106Tyr) and a variant of uncertain significance c.1774C>A (p.Arg592Ser). Based on this diagnosis, family members were referred for genetic counseling. The patient received intravitreal bevacizumab followed by dexamethasone implants due to recurrent cerebrovascular events and concerns regarding anti-VEGF systemic safety.

Conclusion: This case underscores that CADASIL-related vasculopathy may extend to the retinal venous system. Detailed ocular imaging can support early recognition of systemic microvascular disease. BRVO in CADASIL patients may represent an underrecognized manifestation, supporting the need for regular ophthalmic evaluation and interdisciplinary management.

背景:脑常染色体显性动脉病变伴皮质下梗死和白质脑病(CADASIL)是一种由NOTCH3基因突变引起的遗传性小血管疾病。虽然它主要影响大脑小动脉,但新出现的证据表明它累及全身血管。眼部表现,特别是静脉异常,如视网膜分支静脉闭塞(BRVO),在CADASIL中是非常罕见的,并且没有很好的特征。病例介绍:我们报告一例63岁男性,以左眼视力下降及飞蚊症为主诉。多模态影像显示黄斑水肿、视网膜内出血和颞上BRVO。排除了系统性风险因素。基因检测证实了NOTCH3的杂合致病性变异c.317G>A (p.Cys106Tyr)和不确定意义的变异c.1774C>A (p.g arg592ser)。根据这一诊断,家庭成员被转介进行遗传咨询。由于脑血管事件复发和对抗vegf系统安全性的担忧,患者接受了玻璃体内贝伐单抗,随后植入了地塞米松。结论:本病例强调cadasil相关的血管病变可能扩展到视网膜静脉系统。详细的眼部成像可以帮助早期识别全身性微血管疾病。CADASIL患者的BRVO可能是一种未被充分认识的表现,支持定期眼科评估和跨学科管理的需求。
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引用次数: 0
Exploring copy number variations in Lebanese families with rod-cone dystrophy reveals a novel deletion in PRPF31 with haploinsufficiency. 探索黎巴嫩杆状锥体营养不良家庭的拷贝数变化揭示了PRPF31单倍不足的新缺失。
IF 1 4区 医学 Q4 GENETICS & HEREDITY Pub Date : 2025-10-01 Epub Date: 2025-04-28 DOI: 10.1080/13816810.2025.2495945
Zahraa Mousawi, Maysa Choukeir, Lama Jaffal, Louna Karam, Alexandre Assi, José-Noel Ibrahim, Alain Chebly, Said El Shamieh

Background and objectives: Rod-cone dystrophy (RCD), also known as retinitis pigmentosa, is the most common group of retinal dystrophies, affecting around 1:4,000 individuals worldwide. In the present work, we performed a copy number variation (CNV) analysis on next-generation sequencing (NGS) data from two Lebanese families with RCD, since no disease-causing mutations were identified through the analysis of single nucleotide variants (SNVs) and insertions/deletions (Indels). NGS, real-time PCR (qPCR), and chromosomal microarray were performed to identify, validate, and delineate the causative CNVs identified in both families involved in this study. Additionally, expression analysis using qPCR and western blotting was conducted to assess the effect of the PRPF31 variant on gene and protein expression levels.

Results: A novel heterozygous deletion (701 bp) spanning exons 6 and 7 of PRPF31 was identified in the first family (F11), resulting in autosomal dominant RCD due to haploinsufficiency. This was confirmed by reduced mRNA levels and the complete absence of protein expression in the affected individuals (F11:III.2 and F11:II.2). In the second family (F26), we identified a previously documented homozygous deletion in the exons 3-19 of MERTK gene, which is responsible for causing severe autosomal recessive RCD.

Conclusion: The current study expands the mutational spectrum of PRPF31 and MERTK genes, underscoring the importance of CNVs and haploinsufficiency in RCD etiology. These findings serve as a foundation for future analyses concerning gene augmentation therapies.

背景和目的:视杆锥体营养不良(RCD),也被称为色素性视网膜炎,是视网膜营养不良最常见的一组,影响全球约1:4 000人。在目前的工作中,我们对来自两个黎巴嫩RCD家族的下一代测序(NGS)数据进行了拷贝数变异(CNV)分析,因为通过单核苷酸变异(snv)和插入/缺失(Indels)分析没有发现致病突变。采用NGS、实时PCR (qPCR)和染色体微阵列技术来鉴定、验证和描述本研究涉及的两个家族中鉴定的致病性CNVs。此外,利用qPCR和western blotting进行表达分析,评估PRPF31变异对基因和蛋白表达水平的影响。结果:在第一家族(F11)中发现了一个新的杂合缺失(701 bp),跨越PRPF31的第6和第7外显子,导致常染色体显性RCD。受影响个体的mRNA水平降低和蛋白质表达完全缺失证实了这一点(F11:III)。2和F11:II.2)。在第二个家族(F26)中,我们发现了先前记录的MERTK基因外显子3-19的纯合缺失,这是导致严重常染色体隐性RCD的原因。结论:本研究扩大了PRPF31和MERTK基因的突变谱,强调了CNVs和单倍不全在RCD病因学中的重要性。这些发现为未来基因增强疗法的分析奠定了基础。
{"title":"Exploring copy number variations in Lebanese families with rod-cone dystrophy reveals a novel deletion in <i>PRPF31</i> with haploinsufficiency.","authors":"Zahraa Mousawi, Maysa Choukeir, Lama Jaffal, Louna Karam, Alexandre Assi, José-Noel Ibrahim, Alain Chebly, Said El Shamieh","doi":"10.1080/13816810.2025.2495945","DOIUrl":"10.1080/13816810.2025.2495945","url":null,"abstract":"<p><strong>Background and objectives: </strong>Rod-cone dystrophy (RCD), also known as retinitis pigmentosa, is the most common group of retinal dystrophies, affecting around 1:4,000 individuals worldwide. In the present work, we performed a copy number variation (CNV) analysis on next-generation sequencing (NGS) data from two Lebanese families with RCD, since no disease-causing mutations were identified through the analysis of single nucleotide variants (SNVs) and insertions/deletions (Indels). NGS, real-time PCR (qPCR), and chromosomal microarray were performed to identify, validate, and delineate the causative CNVs identified in both families involved in this study. Additionally, expression analysis using qPCR and western blotting was conducted to assess the effect of the <i>PRPF31</i> variant on gene and protein expression levels.</p><p><strong>Results: </strong>A novel heterozygous deletion (701 bp) spanning exons 6 and 7 of <i>PRPF31</i> was identified in the first family (F11), resulting in autosomal dominant RCD due to haploinsufficiency. This was confirmed by reduced mRNA levels and the complete absence of protein expression in the affected individuals (F11:III.2 and F11:II.2). In the second family (F26), we identified a previously documented homozygous deletion in the exons 3-19 of <i>MERTK</i> gene, which is responsible for causing severe autosomal recessive RCD.</p><p><strong>Conclusion: </strong>The current study expands the mutational spectrum of <i>PRPF31</i> and <i>MERTK</i> genes, underscoring the importance of CNVs and haploinsufficiency in RCD etiology. These findings serve as a foundation for future analyses concerning gene augmentation therapies.</p>","PeriodicalId":19594,"journal":{"name":"Ophthalmic Genetics","volume":" ","pages":"440-446"},"PeriodicalIF":1.0,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144037570","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
PMS2-related constitutional mismatch repair deficiency in a patient with unilateral retinoblastoma and negative germline RB1. 单侧视网膜母细胞瘤和生殖系RB1阴性患者pms2相关的体质错配修复缺陷
IF 1 4区 医学 Q4 GENETICS & HEREDITY Pub Date : 2025-10-01 Epub Date: 2025-05-25 DOI: 10.1080/13816810.2025.2503387
Goura Chattannavar, Celeste S Wyman, Eran Tallis, Alexandra Hubbel, Laura Rohan, Lindsay Adamczak, David N Korones, Vikas Khetan

Background: Retinoblastoma, the primary ocular tumor in childhood, arises from the photoreceptor cells of the retina caused by pathogenic loss-of-function variants in both alleles of the RB1 gene, which can be either germline or somatic. The predisposition to hereditary retinoblastoma is primarily linked to germline variants in the RB1 gene.

Material and methods: Here, we describe a two-year-old girl from a Mennonite community who presented at 6 months of age with unilateral Group E retinoblastoma and underwent enucleation. She had a strong family history of cancer: a third elder sister deceased at age 4 with concurrent Burkitt lymphoma and medulloblastoma, and father diagnosed with carcinoid tumor at age 27.

Results: RB1 gene testing detected two pathogenic variants in the RB1 gene (c.299dup, c.1959del) in the tumor tissue. These variants were not identified in blood, indicating somatic changes. Testing of 49 genes associated with cancer predisposition identified a germline homozygous likely pathogenic variant in PMS2 (c.2095 G>T, p.Asp699His) in the proband, consistent with the diagnosis of constitutional mismatch repair deficiency (CMMRD). The proband's fourth elder sister who also tested homozygous for the PMS2 variant, was diagnosed with low grade glioma identified during screening as a part of surveillance for CMMRD.

Conclusions: This case highlights the importance of considering CMMRD in retinoblastoma with normal germline RB1 sequence, particularly with additional factors like family cancer history, consanguinity, or multiple childhood malignancies. Given retinoblastoma's association with CMMRD, screening for it in children with CMMRD is recommended.

背景:视网膜母细胞瘤是儿童眼部的原发性肿瘤,起源于视网膜感光细胞,由RB1基因两个等位基因的致病性功能丧失变异引起,可以是种系的,也可以是体细胞的。遗传性视网膜母细胞瘤的易感性主要与RB1基因的种系变异有关。材料和方法:在这里,我们描述了一位来自门诺派社区的两岁女孩,她在6个月大时出现单侧E组视网膜母细胞瘤并接受了去核手术。她有强烈的癌症家族史:三姐在4岁时死于伯基特淋巴瘤和髓母细胞瘤,父亲在27岁时被诊断出患有类癌。结果:RB1基因检测在肿瘤组织中检测到两种致病性RB1基因变异(c.299dup, c.1959del)。这些变异在血液中未被发现,这表明身体发生了变化。对49个与癌症易感性相关的基因的检测发现,先证者PMS2 (c.2095 G>T, p.Asp699His)中存在一种种系纯合子可能致病的变异,与体质错配修复缺陷(CMMRD)的诊断一致。先证者的四姐也检测出PMS2变异纯合子,在CMMRD监测的筛查过程中被诊断出患有低级别胶质瘤。结论:该病例强调了考虑CMMRD在正常生殖系RB1序列的视网膜母细胞瘤中的重要性,特别是考虑到其他因素,如家族癌症史、血缘关系或多发性儿童恶性肿瘤。鉴于视网膜母细胞瘤与CMMRD的相关性,建议在CMMRD患儿中进行筛查。
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引用次数: 0
Pseudocolobomatous autosomal dominant atrophic maculopathy (PADAM). 假性结肠瘤性常染色体显性萎缩性黄斑病(PADAM)。
IF 1 4区 医学 Q4 GENETICS & HEREDITY Pub Date : 2025-10-01 Epub Date: 2025-05-25 DOI: 10.1080/13816810.2025.2492045
Jonathan Hensman, Mary J van Schooneveld, Roselie M H Diederen, Astrid S Plomp, Cansu de Muijnck, Jacoline B Ten Brink, Ralph J Florijn, Elfride de Baere, Maria M van Genderen, Camiel J F Boon

Purpose: To describe a family with a previously unreported maculopathy across three generations.

Methods: This retrospective chart study describes three patients from three generations of a non-consanguineous Dutch family, with a distinctive maculopathy. All three patients underwent extensive ophthalmic examinations and multimodal imaging including best-corrected visual acuity, fundus photography, spectral-domain optical coherence tomography, fundus autofluorescence imaging, and full-field electroretinography (ffERG). Genetic analyses included next-generation sequencing, whole-exome sequencing, and single nucleotide polymorphism arrays.

Results: Three affected family members had a history of low visual acuity and congenital nystagmus, in combination with sharply demarcated areas of chorioretinal atrophy in the macula, which developed from early childhood. The two adult patients who underwent ffERG had cone and rod responses within normal limits, suggesting a central condition with a normally functioning retina extending beyond the lesions. No (likely) pathogenic variants in the known disease associated genes were found through extensive genetic analysis.

Conclusion: Pseudocolobomatous autosomal dominant atrophic maculopathy (PADAM) is a striking hereditary maculopathy that leads to progressive central vision loss. Future studies may provide additional insights into the genetic basis and underlying mechanisms of this remarkable clinical picture.

目的:描述一个家族与以前未报告的黄斑病变跨越三代。方法:本回顾性图表研究描述了三个患者从三代非近亲荷兰家庭,具有独特的黄斑病变。所有3例患者均接受了广泛的眼科检查和多模态成像,包括最佳矫正视力、眼底摄影、光谱域光学相干断层扫描、眼底自身荧光成像和全视野视网膜电图(ffERG)。遗传分析包括下一代测序、全外显子组测序和单核苷酸多态性阵列。结果:3例患者家庭成员均有低视力和先天性眼球震颤病史,并伴黄斑明显的视网膜萎缩区,发病时间为幼儿期。两名接受了ffERG治疗的成年患者的视锥和视杆反应在正常范围内,表明其处于中心状态,正常功能的视网膜延伸到病变之外。通过广泛的遗传分析,在已知的疾病相关基因中未发现(可能的)致病变异。结论:假性结肠瘤性常染色体显性萎缩性黄斑病变(PADAM)是一种显著的遗传性黄斑病变,可导致进行性中央视力丧失。未来的研究可能会对这一显著临床表现的遗传基础和潜在机制提供更多的见解。
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Ophthalmic Genetics
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