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Genetic screening of the RNA-binding protein RBM24 and its binding sites in the SOX2 3' untranslated region in a cohort of 50 patients with micro-anophthalmia.
IF 1.2 4区 医学 Q4 GENETICS & HEREDITY Pub Date : 2025-02-17 DOI: 10.1080/13816810.2025.2467334
Julien Noero, Mathys Weber, Nicolas Chassaing, Véronique Gaston, Julie Plaisancié, Bertrand Chesneau

Microphthalmia and anophthalmia (M/A) are rare congenital eye anomalies with a birth prevalence of up to 1 in 10,000 births. The etiology of M/A can involve environmental and/or genetic factors, with a genetic origin identified in approximately 50% of cases through analysis of key genes. The transcription factor SOX2 is the most commonly implicated gene, accounting for around 15% of M/A cases. Recent studies have shown that the RNA-binding protein Rbm24 post-transcriptionally regulates Sox2 expression in mice and zebrafish, with Rbm24 null models exhibiting eye phenotypes in both species. Rbm24 can bind to Sox2 mRNA via three AU-Rich elements (AREs) located in its 3' untranslated region (UTR). In this study, we aimed to determine whether pathogenic variants within RBM24 or the SOX2 3'UTR AREs were present in a cohort of 50 individuals with M/A with no identified genetic cause for their condition. Despite the ocular defects observed in animal models, we did not detect any variant of interest in these candidate regions in our cohort. Although we cannot exclude the involvement of pathogenic variations in RBM24 or the SOX2 3'UTR AREs in ocular developmental defects, our study shows that they are unlikely to represent a frequent cause of M/A.

{"title":"Genetic screening of the RNA-binding protein RBM24 and its binding sites in the <i>SOX2</i> 3' untranslated region in a cohort of 50 patients with micro-anophthalmia.","authors":"Julien Noero, Mathys Weber, Nicolas Chassaing, Véronique Gaston, Julie Plaisancié, Bertrand Chesneau","doi":"10.1080/13816810.2025.2467334","DOIUrl":"https://doi.org/10.1080/13816810.2025.2467334","url":null,"abstract":"<p><p>Microphthalmia and anophthalmia (M/A) are rare congenital eye anomalies with a birth prevalence of up to 1 in 10,000 births. The etiology of M/A can involve environmental and/or genetic factors, with a genetic origin identified in approximately 50% of cases through analysis of key genes. The transcription factor <i>SOX2</i> is the most commonly implicated gene, accounting for around 15% of M/A cases. Recent studies have shown that the RNA-binding protein Rbm24 post-transcriptionally regulates <i>Sox2</i> expression in mice and zebrafish, with <i>Rbm24</i> null models exhibiting eye phenotypes in both species. Rbm24 can bind to <i>Sox2</i> mRNA <i>via</i> three AU-Rich elements (AREs) located in its 3' untranslated region (UTR). In this study, we aimed to determine whether pathogenic variants within <i>RBM24</i> or the <i>SOX2</i> 3'UTR AREs were present in a cohort of 50 individuals with M/A with no identified genetic cause for their condition. Despite the ocular defects observed in animal models, we did not detect any variant of interest in these candidate regions in our cohort. Although we cannot exclude the involvement of pathogenic variations in <i>RBM24</i> or the <i>SOX2</i> 3'UTR AREs in ocular developmental defects, our study shows that they are unlikely to represent a frequent cause of M/A.</p>","PeriodicalId":19594,"journal":{"name":"Ophthalmic Genetics","volume":" ","pages":"1-5"},"PeriodicalIF":1.2,"publicationDate":"2025-02-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143433550","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Reproductive counseling and decision making in females affected by X-linked inherited retinal disease: perspectives from carriers.
IF 1.2 4区 医学 Q4 GENETICS & HEREDITY Pub Date : 2025-02-14 DOI: 10.1080/13816810.2025.2463679
Rebecca Clark, Haider Sarwar, Leland Wong, Elizabeth White, Lesley Everett, Molly Marra

Introduction: X-linked inherited retinal diseases (XL-IRDs) are genetic disorders that typically present with higher disease burden in individuals assigned male at birth, often resulting in significant vision loss. Individuals assigned female at birth (AFAB) may also experience symptoms. Understanding the role of genetic counseling and testing in reproductive decision-making for AFAB individuals with XL-IRDs is crucial for improving reproductive empowerment.

Methods: This study surveyed AFAB individuals with a confirmed or family history of XL-IRDs. Eligible participants completed an anonymous online survey between July 2023 and November 2023, which collected data on genetic testing, counseling experiences, and the impact of these on reproductive decision making.

Results: Of the 118 survey respondents, 67% had confirmed genetics or a family history of CHM-related disease, 23% of RPGR/RP2, 5% of RS1, and 3% of NYX/CACNA1F. Fifty five percent of respondents would have preferred genetic testing earlier if it had been possible. Only 26 respondents (22.0%) received some sort of reproductive genetic counseling, the majority of which were counseled by a genetic counselor at a retinal dystrophy clinic. Most XX individuals with confirmed genetics or a family history of XL-IRDs had not received reproductive counseling about their diagnosis. However, their personal and familial experiences with an XL-IRD variably impacted their reproductive decision-making process.

Conclusion: Recognition that retinal dystrophy clinics are the primary location for XL-IRD reproductive risk counseling informs the timing and content of counseling by ophthalmic genetics providers and genetic counselors.

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引用次数: 0
Pathogenic variants in the IFT140 gene and an intriguing clinical presentation in two pediatric patients. Cases report and review of literature.
IF 1.2 4区 医学 Q4 GENETICS & HEREDITY Pub Date : 2025-02-10 DOI: 10.1080/13816810.2025.2462987
Maša Koce, Ana Fakin, Špela Markelj, Maruša Debeljak, Jernej Kovač, Ajda Lisec, Sara Bertok, Anamarija Meglič

Background: The IFT140 gene is one of many genes involved in the synthesis of proteins needed for cilium function. Ciliopathies are a group of disorders associated with the dysfunction of ciliary structures and express as an individual organ system disease as well as multisystem disorders. Dysfunctional cilia typically manifest as pleiotropic clinical features, reflecting their widespread distribution and varied functionality.

Cases presentation: We present two cases: Case 1, a male with two pathological variations in IFT140 gene, a compound heterozygote, with kidney failure, retinal dystrophy, cardiomyopathy, and situs inversus and Case 2, a female with an IFT140 pathogenic homozygous variant, presented with nephrotic range proteinuria, retinitis pigmentosa, and pseudotumor cerebri.

Conclusions: As cilia dysfunction is known to cause pleiotropic clinical features due to the presence of cilia in different organs in the body, the clinical picture of the IFT140 mutation is also very heterogeneous. Our cases reveal unprecedented manifestations - LVNC, situs inversus, and pseudotumor cerebri - not previously documented in IFT140 mutation. These findings underscore the importance of genetic screening in ciliopathies.

{"title":"Pathogenic variants in the <i>IFT140</i> gene and an intriguing clinical presentation in two pediatric patients. Cases report and review of literature.","authors":"Maša Koce, Ana Fakin, Špela Markelj, Maruša Debeljak, Jernej Kovač, Ajda Lisec, Sara Bertok, Anamarija Meglič","doi":"10.1080/13816810.2025.2462987","DOIUrl":"https://doi.org/10.1080/13816810.2025.2462987","url":null,"abstract":"<p><strong>Background: </strong>The <i>IFT140</i> gene is one of many genes involved in the synthesis of proteins needed for cilium function. Ciliopathies are a group of disorders associated with the dysfunction of ciliary structures and express as an individual organ system disease as well as multisystem disorders. Dysfunctional cilia typically manifest as pleiotropic clinical features, reflecting their widespread distribution and varied functionality.</p><p><strong>Cases presentation: </strong>We present two cases: Case 1, a male with two pathological variations in <i>IFT140</i> gene, a compound heterozygote, with kidney failure, retinal dystrophy, cardiomyopathy, and situs inversus and Case 2, a female with an <i>IFT140</i> pathogenic homozygous variant, presented with nephrotic range proteinuria, retinitis pigmentosa, and pseudotumor cerebri.</p><p><strong>Conclusions: </strong>As cilia dysfunction is known to cause pleiotropic clinical features due to the presence of cilia in different organs in the body, the clinical picture of the <i>IFT140</i> mutation is also very heterogeneous. Our cases reveal unprecedented manifestations - LVNC, situs inversus, and pseudotumor cerebri - not previously documented in <i>IFT140</i> mutation. These findings underscore the importance of genetic screening in ciliopathies.</p>","PeriodicalId":19594,"journal":{"name":"Ophthalmic Genetics","volume":" ","pages":"1-8"},"PeriodicalIF":1.2,"publicationDate":"2025-02-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143383044","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Nationwide incidence and survival of retinoblastoma in the USA between 1996 and 2018: a review of 5730 cases.
IF 1.2 4区 医学 Q4 GENETICS & HEREDITY Pub Date : 2025-02-10 DOI: 10.1080/13816810.2024.2449086
Ahmad Samir Alfaar, Hadeel Halalsheh, Abdallah E Shelil, Ibrahim Qaddoumi

Background: Retinoblastoma is the most common intraocular cancer in children, with significant variations in incidence and Survival. This study sought to evaluate nationwide retinoblastoma incidences and survival rates in the United States from 1996 to 2018.

Methods: We extracted data from the North American Association of Central Cancer Registries (NACCR) and the National Program of Cancer Registries between 1996 and 2018. Cases were stratified by sex, age, race, Hispanic origin, urban or rural origin, stage of the disease, and state of residence and compared by laterality. We applied SEER*Stat version 8.4.0.1 software for age-adjusted incidence rates (AAIR) and annual average per cent change (AAPC) and JoinPoint version 4.9.1.0 software to assess incidence trends. Survival trends were evaluated with JPSurv online software.

Results: The study comprised 5730 patients with a crude incidence rate (CIR) of 0.89 per million. The incidence declined from 29.6 per million in the first year of life to 16.5 in the second year. The CIR for unilateral and bilateral diseases were 0.61 and 0.27, respectively. Males had a slightly higher and significant crude incidence of 0.93 versus 0.86 for females. Hispanics had the highest rate of 1.48 in general. Treatment data revealed chemotherapy usage in 39% of unilateral and 78% of bilateral patients. The 5-year cumulative relative Survival did not significantly differ between unilateral (96.8%) and bilateral (97.0%) patients. A slight but significant annual decline in CIR was observed, with a trend toward an increase in the percentage of patients diagnosed in the first year of life.

Conclusions: This study indicated an overall decrease in incidence but a slight increase in early diagnosis. Findings underscore the need for consistent surveillance, early detection strategies, and personalized care to improve patient outcomes. The changes in the Survival in the unilateral disease require further investigations and mitigation strategies.

{"title":"Nationwide incidence and survival of retinoblastoma in the USA between 1996 and 2018: a review of 5730 cases.","authors":"Ahmad Samir Alfaar, Hadeel Halalsheh, Abdallah E Shelil, Ibrahim Qaddoumi","doi":"10.1080/13816810.2024.2449086","DOIUrl":"https://doi.org/10.1080/13816810.2024.2449086","url":null,"abstract":"<p><strong>Background: </strong>Retinoblastoma is the most common intraocular cancer in children, with significant variations in incidence and Survival. This study sought to evaluate nationwide retinoblastoma incidences and survival rates in the United States from 1996 to 2018.</p><p><strong>Methods: </strong>We extracted data from the North American Association of Central Cancer Registries (NACCR) and the National Program of Cancer Registries between 1996 and 2018. Cases were stratified by sex, age, race, Hispanic origin, urban or rural origin, stage of the disease, and state of residence and compared by laterality. We applied SEER*Stat version 8.4.0.1 software for age-adjusted incidence rates (AAIR) and annual average per cent change (AAPC) and JoinPoint version 4.9.1.0 software to assess incidence trends. Survival trends were evaluated with JPSurv online software.</p><p><strong>Results: </strong>The study comprised 5730 patients with a crude incidence rate (CIR) of 0.89 per million. The incidence declined from 29.6 per million in the first year of life to 16.5 in the second year. The CIR for unilateral and bilateral diseases were 0.61 and 0.27, respectively. Males had a slightly higher and significant crude incidence of 0.93 versus 0.86 for females. Hispanics had the highest rate of 1.48 in general. Treatment data revealed chemotherapy usage in 39% of unilateral and 78% of bilateral patients. The 5-year cumulative relative Survival did not significantly differ between unilateral (96.8%) and bilateral (97.0%) patients. A slight but significant annual decline in CIR was observed, with a trend toward an increase in the percentage of patients diagnosed in the first year of life.</p><p><strong>Conclusions: </strong>This study indicated an overall decrease in incidence but a slight increase in early diagnosis. Findings underscore the need for consistent surveillance, early detection strategies, and personalized care to improve patient outcomes. The changes in the Survival in the unilateral disease require further investigations and mitigation strategies.</p>","PeriodicalId":19594,"journal":{"name":"Ophthalmic Genetics","volume":" ","pages":"1-10"},"PeriodicalIF":1.2,"publicationDate":"2025-02-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143383041","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Whole genome sequencing of 10 families with optic disc drusen. 对 10 个视盘色素沉着家庭进行全基因组测序。
IF 1.2 4区 医学 Q4 GENETICS & HEREDITY Pub Date : 2025-01-26 DOI: 10.1080/13816810.2025.2450469
Alvilda H Steensberg, Chris Ovens, Clare L Fraser, Lasse Malmqvist, Mette Bertelsen, Karen Grønskov, Steffen Hamann

Introduction: Optic disc drusen (ODD) are believed to have a genetic predisposition, with autosomal dominant inheritance pattern with incomplete penetrance suggested through family pedigree analysis. ODD prevalence is higher in certain genetic disorders, such as pseudoxanthoma elasticum and retinitis pigmentosa. This study aimed to identify candidate genes potentially involved in the development of ODD.

Methods: Family members aged 18 years or older from families with ODD were included. Participants underwent optical coherence tomography of the optic nerve head, and blood samples were collected for whole-genome sequencing using the Illumina NovaSeq 6000 platform. Single nucleotide variants were identified with the Genome Analysis Toolkit (GATK) and filtered in VarSeq using a population frequency threshold of 1%. Selected genes were classified according to ACMG guidelines.

Results: A total of 10 families were included, three of which had more than two affected members. Thirty-three variants were identified, with the following genes selected for description: ABCC6, DDX50, TREX1, PLCB4, PTPRQ, LBR, RP1L1, and KRT3. The identified candidate genes showed a wide range of functions and are associated with different disorders. Of particular interest is ABCC6, which normally inhibits ectopic calcification.

Conclusion: We identified a list of candidate genes. Studies including larger ODD families are necessary to identify robust candidate genes.

{"title":"Whole genome sequencing of 10 families with optic disc drusen.","authors":"Alvilda H Steensberg, Chris Ovens, Clare L Fraser, Lasse Malmqvist, Mette Bertelsen, Karen Grønskov, Steffen Hamann","doi":"10.1080/13816810.2025.2450469","DOIUrl":"https://doi.org/10.1080/13816810.2025.2450469","url":null,"abstract":"<p><strong>Introduction: </strong>Optic disc drusen (ODD) are believed to have a genetic predisposition, with autosomal dominant inheritance pattern with incomplete penetrance suggested through family pedigree analysis. ODD prevalence is higher in certain genetic disorders, such as pseudoxanthoma elasticum and retinitis pigmentosa. This study aimed to identify candidate genes potentially involved in the development of ODD.</p><p><strong>Methods: </strong>Family members aged 18 years or older from families with ODD were included. Participants underwent optical coherence tomography of the optic nerve head, and blood samples were collected for whole-genome sequencing using the Illumina NovaSeq 6000 platform. Single nucleotide variants were identified with the Genome Analysis Toolkit (GATK) and filtered in VarSeq using a population frequency threshold of 1%. Selected genes were classified according to ACMG guidelines.</p><p><strong>Results: </strong>A total of 10 families were included, three of which had more than two affected members. Thirty-three variants were identified, with the following genes selected for description: <i>ABCC6, DDX50, TREX1, PLCB4, PTPRQ, LBR, RP1L1</i>, and <i>KRT3</i>. The identified candidate genes showed a wide range of functions and are associated with different disorders. Of particular interest is <i>ABCC6</i>, which normally inhibits ectopic calcification.</p><p><strong>Conclusion: </strong>We identified a list of candidate genes. Studies including larger ODD families are necessary to identify robust candidate genes.</p>","PeriodicalId":19594,"journal":{"name":"Ophthalmic Genetics","volume":" ","pages":"1-6"},"PeriodicalIF":1.2,"publicationDate":"2025-01-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143047445","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comprehensive insights into circular RNAs, miRNAs, and lncRNAs as biomarkers in retinoblastoma.
IF 1.2 4区 医学 Q4 GENETICS & HEREDITY Pub Date : 2025-01-23 DOI: 10.1080/13816810.2025.2456607
Mahsa Fakeri, Fatemeh Shakoul, Seyyed Mohammad Yaghoubi, Shabnam Koulaeizadeh, Mehdi Haghi

Retinoblastoma (RB) is a common and potentially lethal cancer that primarily affects young children worldwide, with survival rates significantly varying between high- and low-income countries. This review aims to identify essential diagnostic markers for early diagnosis by investigating the molecular pathways associated with RB. The prevalence of RB cases is notably concentrated in Asia and Africa, contributing to a global survival rate estimate of less than 30%. Current management strategies involve complex, individualized treatment plans that consider cultural nuances, genetic abnormalities, staging, and the availability of medical resources. Recent studies suggest that circular RNAs (circRNAs) may serve as predictive and diagnostic biomarkers in the etiology of RB. This review examines the roles of long non-coding RNAs (lncRNAs), microRNAs (miRNAs), and circRNAs in RB, with the goal of improving survival rates, particularly in low- and middle-income countries. A deeper understanding of the molecular pathways of RB may facilitate the development of personalized treatment plans and targeted therapies. Elevated expression of circRNAs has been observed in most patient cases, and studies indicate that reducing specific circRNA production can inhibit tumor cell development and progression. Investigating the roles and mechanisms of circular RNAs in RB holds promise for future treatment approaches.

{"title":"Comprehensive insights into circular RNAs, miRNAs, and lncRNAs as biomarkers in retinoblastoma.","authors":"Mahsa Fakeri, Fatemeh Shakoul, Seyyed Mohammad Yaghoubi, Shabnam Koulaeizadeh, Mehdi Haghi","doi":"10.1080/13816810.2025.2456607","DOIUrl":"https://doi.org/10.1080/13816810.2025.2456607","url":null,"abstract":"<p><p>Retinoblastoma (RB) is a common and potentially lethal cancer that primarily affects young children worldwide, with survival rates significantly varying between high- and low-income countries. This review aims to identify essential diagnostic markers for early diagnosis by investigating the molecular pathways associated with RB. The prevalence of RB cases is notably concentrated in Asia and Africa, contributing to a global survival rate estimate of less than 30%. Current management strategies involve complex, individualized treatment plans that consider cultural nuances, genetic abnormalities, staging, and the availability of medical resources. Recent studies suggest that circular RNAs (circRNAs) may serve as predictive and diagnostic biomarkers in the etiology of RB. This review examines the roles of long non-coding RNAs (lncRNAs), microRNAs (miRNAs), and circRNAs in RB, with the goal of improving survival rates, particularly in low- and middle-income countries. A deeper understanding of the molecular pathways of RB may facilitate the development of personalized treatment plans and targeted therapies. Elevated expression of circRNAs has been observed in most patient cases, and studies indicate that reducing specific circRNA production can inhibit tumor cell development and progression. Investigating the roles and mechanisms of circular RNAs in RB holds promise for future treatment approaches.</p>","PeriodicalId":19594,"journal":{"name":"Ophthalmic Genetics","volume":" ","pages":"1-11"},"PeriodicalIF":1.2,"publicationDate":"2025-01-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143028972","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A novel frameshift variant in the GJA1 gene is associated with recessive oculodentodigital dysplasia. GJA1基因中一种新的移码变异与隐性眼齿指发育不良有关。
IF 1.2 4区 医学 Q4 GENETICS & HEREDITY Pub Date : 2025-01-20 DOI: 10.1080/13816810.2024.2447499
Andrea Andrade Azevedo de Vasconcelos, Jin Kyun Oh, Bin Guan, Virginia Laura Lucas Torres, Maria Isabel Lynch Gaete, Jose Ronaldo Lima de Carvalho

Background: Oculodentodigital dysplasia (ODDD) is a rare syndrome that causes a constellation of facial, ophthalmic, dental, and limb abnormalities. Variants in the gap junction alpha-1 (GJA1) gene have been described in patients with ODDD. Hereby we present the ocular manifestations in a patient with recessive ODDD due to a novel homozygous frameshift variant in GJA1.

Material and methods: Detailed ophthalmic manifestation and clinical features of disease were documented through external color photography and ultrasound biomicroscopy (UBM). Genetic testing was performed through a congenital heart disease panel.

Results: A six-year-old girl was referred for ophthalmic evaluation in the setting of numerous syndromic features compatible with ODDD. Clinical features included nasal thinning, alar hypoplasia, hypotrichosis, microdontia and enamel hypoplasia. Ocular manifestations included microcornea, microphthalmia, posterior synechiae, cataract, and persistent hyperplastic primary vitreous. Genetic testing revealed a novel homozygous variant in the GJA1 gene, c.565del p.(Arg189Glufs *35). This variant disrupts the fourth helical transmembrane domain of the protein as well as its C-terminal cytoplasmic tail.

Conclusion: Here we describe the clinical and ocular manifestations of a Brazilian patient with ODDD, report a novel frameshift homozygous variant in GJA1, and contribute to the ongoing expansion of scientific knowledge regarding ODDD.

背景:眼齿指发育不良(ODDD)是一种罕见的综合征,可引起面部、眼部、牙齿和肢体的一系列异常。在ODDD患者中发现了间隙连接α -1 (GJA1)基因的变异。在此,我们报告了一位隐性ODDD患者的眼部表现,这是由于GJA1的一种新的纯合移码变异。材料和方法:通过体外彩色摄影和超声生物显微镜(UBM)详细记录疾病的眼科表现和临床特征。基因检测是通过先天性心脏病小组进行的。结果:一名六岁女孩在与ODDD相符的众多综合征特征的背景下被转介眼科评估。临床表现包括鼻部变薄、鼻翼发育不全、毛少、小齿和牙釉质发育不全。眼部表现包括小角膜、小眼、后粘连、白内障和原发性玻璃体持续增生。基因检测发现GJA1基因有一个新的纯合变异,c.565del p.(Arg189Glufs *35)。这种变异破坏了蛋白质的第四个螺旋跨膜结构域及其c端细胞质尾部。结论:在这里,我们描述了一名巴西ODDD患者的临床和眼部表现,报告了GJA1中一个新的移码纯合变异,并为ODDD的科学知识的不断扩展做出了贡献。
{"title":"A novel frameshift variant in the <i>GJA1</i> gene is associated with recessive oculodentodigital dysplasia.","authors":"Andrea Andrade Azevedo de Vasconcelos, Jin Kyun Oh, Bin Guan, Virginia Laura Lucas Torres, Maria Isabel Lynch Gaete, Jose Ronaldo Lima de Carvalho","doi":"10.1080/13816810.2024.2447499","DOIUrl":"https://doi.org/10.1080/13816810.2024.2447499","url":null,"abstract":"<p><strong>Background: </strong>Oculodentodigital dysplasia (ODDD) is a rare syndrome that causes a constellation of facial, ophthalmic, dental, and limb abnormalities. Variants in the gap junction alpha-1 (<i>GJA1</i>) gene have been described in patients with ODDD. Hereby we present the ocular manifestations in a patient with recessive ODDD due to a novel homozygous frameshift variant in <i>GJA1</i>.</p><p><strong>Material and methods: </strong>Detailed ophthalmic manifestation and clinical features of disease were documented through external color photography and ultrasound biomicroscopy (UBM). Genetic testing was performed through a congenital heart disease panel.</p><p><strong>Results: </strong>A six-year-old girl was referred for ophthalmic evaluation in the setting of numerous syndromic features compatible with ODDD. Clinical features included nasal thinning, alar hypoplasia, hypotrichosis, microdontia and enamel hypoplasia. Ocular manifestations included microcornea, microphthalmia, posterior synechiae, cataract, and persistent hyperplastic primary vitreous. Genetic testing revealed a novel homozygous variant in the <i>GJA1</i> gene, c.565del p.(Arg189Glufs *35). This variant disrupts the fourth helical transmembrane domain of the protein as well as its C-terminal cytoplasmic tail.</p><p><strong>Conclusion: </strong>Here we describe the clinical and ocular manifestations of a Brazilian patient with ODDD, report a novel frameshift homozygous variant in <i>GJA1</i>, and contribute to the ongoing expansion of scientific knowledge regarding ODDD.</p>","PeriodicalId":19594,"journal":{"name":"Ophthalmic Genetics","volume":" ","pages":"1-5"},"PeriodicalIF":1.2,"publicationDate":"2025-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143009206","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Antioxidant MitoQ increases viability of human corneal endothelial cells with congenital hereditary endothelial dystrophy-associated SLC4A11 mutations. 抗氧化剂MitoQ增加先天性遗传性内皮营养不良相关SLC4A11突变的人角膜内皮细胞的活力。
IF 1.2 4区 医学 Q4 GENETICS & HEREDITY Pub Date : 2025-01-20 DOI: 10.1080/13816810.2025.2450455
Saloni Peshkar-Kulkarni, Doug D Chung, Anthony J Aldave

Purpose: To assess the impact of MitoQ, a mitochondria-targeted antioxidant, on viability of human corneal endothelial cell (hCEnC) lines expressing SLC4A11 mutations associated with congenital hereditary endothelial dystrophy (CHED) and Fuchs endothelial corneal dystrophy type 4 (FECD4).

Methods: SLC4A11 wildtype (SLC4A11WT) and mutant (SLC4A11MU) hCEnC lines were created to express either SLC4A11 variant 2 (V2) or variant 3 (V3) by stable transduction of SLC4A11-/- hCEnC-21T with lentiviruses containing either SLC4A11WT or one of the following mutations: V2 (V3) mutants c.374 G>A (c.326 G>A) (CHED), c.1813C>T (c.1765C>T) (CHED), c.2263C>T (c.2215C>T) (CHED), or c.2224 G>A (c.2176 G>A) (FECD4). A SLC4A11-/- empty hCEnC line was created by stable transduction of SLC4A11-/- hCEnC-21T with an empty lentiviral plasmid. Cell viability was measured by exposing MitoQ treated and untreated cells to oxidative stress agent tert-butyl hydroperoxide (tBH) followed by performing XTT assays and spectrophotometry.

Results: SLC4A11-/- empty, SLC4A11 V2WT, and SLC4A11 V3WT hCEnC exposed to ≤0.01 μM MitoQ retained over 90% of the viability of untreated SLC4A11-/- empty hCEnC. When treated with MitoQ, SLC4A11-/- empty was able to demonstrate partial restoration of cell viability. All CHED-associated mutant hCEnC lines treated with 0.01 μM MitoQ demonstrated increased viability compared to untreated following exposure to tBH. The FECD4-associated mutant hCEnC line treated with 0.01 μM MitoQ showed no significant increase in cell viability compared to untreated following exposure to tBH.

Conclusions: Media supplementation with antioxidant MitoQ has beneficial effects on cell viability in hCEnC harboring CHED-associated SLC4A11 mutations following exposure to tBH-induced oxidative stress.

目的:评估线粒体靶向抗氧化剂MitoQ对表达先天性遗传性内皮营养不良(CHED)和Fuchs内皮性角膜营养不良4型(FECD4)相关SLC4A11突变的人角膜内皮细胞(hCEnC)细胞系活力的影响。方法:SLC4A11野生型(SLC4A11WT)和突变型(SLC4A11MU) hCEnC细胞系通过含有SLC4A11WT或以下突变之一的慢病毒稳定转导SLC4A11-/- hCEnC- 21t来表达SLC4A11变体2 (V2)或变体3 (V3): V2 (V3)突变体c.374 G>A (c.326 G>A) (CHED), c.1813C>T (c.1765C>T) (CHED), c.2263C>T (c.2215C>T) (CHED)或c.2224 G>A (c.2176 G>A) (FECD4)。用空慢病毒质粒稳定转导SLC4A11-/- hCEnC- 21t,建立SLC4A11-/-空hCEnC细胞系。通过将MitoQ处理和未处理的细胞暴露于氧化应激剂叔丁基过氧化氢(tBH),然后进行XTT测定和分光光度法来测定细胞活力。结果:暴露于≤0.01 μM MitoQ的SLC4A11-/- empty、SLC4A11 V2WT和SLC4A11 V3WT hCEnC的存活率保持在未处理SLC4A11-/- empty hCEnC的90%以上。当用MitoQ处理时,SLC4A11-/- empty能够部分恢复细胞活力。在暴露于tBH后,用0.01 μM MitoQ处理的所有与ched相关的突变型hCEnC细胞系的活力都比未处理的高。经0.01 μM MitoQ处理的fecd4相关突变体hCEnC细胞系在暴露于tBH后,与未处理的细胞系相比,细胞活力没有显著增加。结论:培养基中添加抗氧化剂MitoQ对暴露于tbh诱导的氧化应激后携带ched相关SLC4A11突变的hCEnC细胞活力有有益影响。
{"title":"Antioxidant MitoQ increases viability of human corneal endothelial cells with congenital hereditary endothelial dystrophy-associated <i>SLC4A11</i> mutations.","authors":"Saloni Peshkar-Kulkarni, Doug D Chung, Anthony J Aldave","doi":"10.1080/13816810.2025.2450455","DOIUrl":"https://doi.org/10.1080/13816810.2025.2450455","url":null,"abstract":"<p><strong>Purpose: </strong>To assess the impact of MitoQ, a mitochondria-targeted antioxidant, on viability of human corneal endothelial cell (hCEnC) lines expressing <i>SLC4A11</i> mutations associated with congenital hereditary endothelial dystrophy (CHED) and Fuchs endothelial corneal dystrophy type 4 (FECD4).</p><p><strong>Methods: </strong><i>SLC4A11</i> wildtype (<i>SLC4A11</i><sup>WT</sup>) and mutant (<i>SLC4A11</i><sup>MU</sup>) hCEnC lines were created to express either <i>SLC4A11</i> variant 2 (V2) or variant 3 (V3) by stable transduction of <i>SLC4A11<sup>-/-</sup></i> hCEnC-21T with lentiviruses containing either <i>SLC4A11</i><sup>WT</sup> or one of the following mutations: V2 (V3) mutants c.374 G>A (c.326 G>A) (CHED), c.1813C>T (c.1765C>T) (CHED), c.2263C>T (c.2215C>T) (CHED), or c.2224 G>A (c.2176 G>A) (FECD4). A <i>SLC4A11<sup>-/-</sup></i> <sup>empty</sup> hCEnC line was created by stable transduction of <i>SLC4A11<sup>-/-</sup></i> hCEnC-21T with an empty lentiviral plasmid. Cell viability was measured by exposing MitoQ treated and untreated cells to oxidative stress agent tert-butyl hydroperoxide (tBH) followed by performing XTT assays and spectrophotometry.</p><p><strong>Results: </strong><i>SLC4A11<sup>-/-</sup></i> <sup>empty</sup>, <i>SLC4A11</i> V2<sup>WT</sup>, and <i>SLC4A11</i> V3<sup>WT</sup> hCEnC exposed to ≤0.01 μM MitoQ retained over 90% of the viability of untreated <i>SLC4A11<sup>-/-</sup></i> <sup>empty</sup> hCEnC. When treated with MitoQ, <i>SLC4A11<sup>-/-</sup></i> <sup>empty</sup> was able to demonstrate partial restoration of cell viability. All CHED-associated mutant hCEnC lines treated with 0.01 μM MitoQ demonstrated increased viability compared to untreated following exposure to tBH. The FECD4-associated mutant hCEnC line treated with 0.01 μM MitoQ showed no significant increase in cell viability compared to untreated following exposure to tBH.</p><p><strong>Conclusions: </strong>Media supplementation with antioxidant MitoQ has beneficial effects on cell viability in hCEnC harboring CHED-associated <i>SLC4A11</i> mutations following exposure to tBH-induced oxidative stress.</p>","PeriodicalId":19594,"journal":{"name":"Ophthalmic Genetics","volume":" ","pages":"1-8"},"PeriodicalIF":1.2,"publicationDate":"2025-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143009207","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Family and genetic counseling in Leber hereditary optic neuropathy. Leber遗传性视神经病变的家庭与遗传咨询。
IF 1.2 4区 医学 Q4 GENETICS & HEREDITY Pub Date : 2025-01-20 DOI: 10.1080/13816810.2025.2451175
David A Mackey, Sandra E Staffieri, M Isabel G Lopez Sanchez, Lisa S Kearns

Aim: Leber hereditary optic neuropathy (LHON) predominantly manifests during adolescence or young adulthood, resulting in sudden and profound vision loss in individuals who previously had normal vision. This abrupt change significantly impacts daily life, necessitating emotional support, counseling and low-vision rehabilitative services to help affected individuals cope with the shock and adapt to their residual vision. The psychosocial burden of dealing with vision loss extends beyond the individuals directly affected by LHON, affecting matrilineal relatives who face the dual challenges of grieving for their loved one's vision loss and managing their own uncertainty about potential vision loss and its familial implications.

Method: We reviewed key information that needs to be obtained prior to genetic counseling for LHON. We reviewed key counseling issues within LHON-affected families and the issues pending several subgroups of family members with distinct and varying genetic counseling needs.

Results: Family subgroups requiring specific counseling issues include the individuals affected by LHON, their mother, siblings, father, partner, and children. Genetic counseling plays an integral part of clinical care in families affected by LHON, providing tailored support and information to each subgroup.

Conclusion: To provide accurate information to families and guide them toward potential supports, treatments and preventive measures, health professionals need to be aware of the factors influencing visual recovery and individual risk of vision loss.

目的:Leber遗传性视神经病变(LHON)主要表现在青春期或青年期,导致以前视力正常的个体突然和深度视力丧失。这种突然的变化严重影响了日常生活,需要情感支持、咨询和低视力康复服务来帮助受影响的个人应对冲击并适应他们的残视力。处理视力丧失的社会心理负担超出了直接受LHON影响的个人,影响到面临双重挑战的母系亲属,他们为亲人的视力丧失而悲伤,并管理自己对潜在视力丧失及其家庭影响的不确定性。方法:我们回顾了在进行LHON遗传咨询之前需要获得的关键信息。我们回顾了lhon影响家庭的关键咨询问题,以及具有不同遗传咨询需求的几个家庭成员亚组的问题。结果:需要特殊咨询问题的家庭亚组包括受LHON影响的个人、他们的母亲、兄弟姐妹、父亲、伴侣和孩子。遗传咨询在受LHON影响的家庭的临床护理中起着不可或缺的作用,为每个亚组提供量身定制的支持和信息。结论:卫生专业人员需要了解影响视力恢复的因素和个人视力丧失的风险,以便为家庭提供准确的信息,并指导他们采取可能的支持、治疗和预防措施。
{"title":"Family and genetic counseling in Leber hereditary optic neuropathy.","authors":"David A Mackey, Sandra E Staffieri, M Isabel G Lopez Sanchez, Lisa S Kearns","doi":"10.1080/13816810.2025.2451175","DOIUrl":"https://doi.org/10.1080/13816810.2025.2451175","url":null,"abstract":"<p><strong>Aim: </strong>Leber hereditary optic neuropathy (LHON) predominantly manifests during adolescence or young adulthood, resulting in sudden and profound vision loss in individuals who previously had normal vision. This abrupt change significantly impacts daily life, necessitating emotional support, counseling and low-vision rehabilitative services to help affected individuals cope with the shock and adapt to their residual vision. The psychosocial burden of dealing with vision loss extends beyond the individuals directly affected by LHON, affecting matrilineal relatives who face the dual challenges of grieving for their loved one's vision loss and managing their own uncertainty about potential vision loss and its familial implications.</p><p><strong>Method: </strong>We reviewed key information that needs to be obtained prior to genetic counseling for LHON. We reviewed key counseling issues within LHON-affected families and the issues pending several subgroups of family members with distinct and varying genetic counseling needs.</p><p><strong>Results: </strong>Family subgroups requiring specific counseling issues include the individuals affected by LHON, their mother, siblings, father, partner, and children. Genetic counseling plays an integral part of clinical care in families affected by LHON, providing tailored support and information to each subgroup.</p><p><strong>Conclusion: </strong>To provide accurate information to families and guide them toward potential supports, treatments and preventive measures, health professionals need to be aware of the factors influencing visual recovery and individual risk of vision loss.</p>","PeriodicalId":19594,"journal":{"name":"Ophthalmic Genetics","volume":" ","pages":"1-9"},"PeriodicalIF":1.2,"publicationDate":"2025-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143007842","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Machine learning demonstrates clinical utility in distinguishing retinoblastoma from pseudo retinoblastoma with RetCam images. 机器学习证明了使用RetCam图像区分视网膜母细胞瘤和伪视网膜母细胞瘤的临床应用。
IF 1.2 4区 医学 Q4 GENETICS & HEREDITY Pub Date : 2025-01-20 DOI: 10.1080/13816810.2025.2455576
Owen Cruz-Abrams, Ricardo Dodds Rojas, David H Abramson

Background: Retinoblastoma is diagnosed and treated without biopsy based solely on appearance (with the indirect ophthalmoscope and imaging). More than 20 benign ophthalmic disorders resemble retinoblastoma and errors in diagnosis continue to be made worldwide. A better noninvasive method for distinguishing retinoblastoma from pseudo retinoblastoma is needed.

Methods: RetCam imaging of retinoblastoma and pseudo retinoblastoma from the largest retinoblastoma center in the U.S. (Memorial Sloan Kettering Cancer Center, New York, NY) were used for this study. We used several neural networks (ResNet-18, ResNet-34, ResNet-50, ResNet-101, ResNet-152, and a Vision Image Transformer, or VIT), using 80% of images for training, 10% for validation, and 10% for testing.

Results: Two thousand eight hundred eighty-two RetCam images from patients with retinoblastoma at diagnosis, 1,970 images from pseudo retinoblastoma at diagnosis, and 804 normal pediatric fundus images were included. The highest sensitivity (98.6%) was obtained with a ResNet-101 model, as were the highest accuracy and F1 scores of 97.3% and 97.7%. The highest specificity (97.0%) and precision (97.0%) was attained with a ResNet-152 model.

Conclusion: Our machine learning algorithm successfully distinguished retinoblastoma from retinoblastoma with high specificity and sensitivity and if implemented worldwide will prevent hundreds of eyes from incorrectly being surgically removed yearly.

背景:视网膜母细胞瘤的诊断和治疗不需要活检,仅根据外观(间接检眼镜和成像)。超过20种类似视网膜母细胞瘤的良性眼科疾病在世界范围内仍然存在诊断错误。需要一种更好的非侵入性方法来区分视网膜母细胞瘤和伪视网膜母细胞瘤。方法:视网膜母细胞瘤和伪视网膜母细胞瘤的RetCam成像来自美国最大的视网膜母细胞瘤中心(Memorial Sloan Kettering Cancer center, New York, NY)。我们使用了几个神经网络(ResNet-18, ResNet-34, ResNet-50, ResNet-101, ResNet-152和视觉图像转换器,或VIT),使用80%的图像用于训练,10%用于验证,10%用于测试。结果:包括视网膜母细胞瘤患者诊断时的RetCam图像2,882张,诊断时的伪视网膜母细胞瘤图像1,970张,以及804张正常儿童眼底图像。ResNet-101模型灵敏度最高(98.6%),准确率最高,F1评分为97.3%和97.7%。ResNet-152模型的特异性(97.0%)和精确度(97.0%)最高。结论:我们的机器学习算法以高特异性和敏感性成功区分了视网膜母细胞瘤和视网膜母细胞瘤,如果在全球范围内实施,每年将防止数百只眼睛被错误地手术切除。
{"title":"Machine learning demonstrates clinical utility in distinguishing retinoblastoma from pseudo retinoblastoma with RetCam images.","authors":"Owen Cruz-Abrams, Ricardo Dodds Rojas, David H Abramson","doi":"10.1080/13816810.2025.2455576","DOIUrl":"https://doi.org/10.1080/13816810.2025.2455576","url":null,"abstract":"<p><strong>Background: </strong>Retinoblastoma is diagnosed and treated without biopsy based solely on appearance (with the indirect ophthalmoscope and imaging). More than 20 benign ophthalmic disorders resemble retinoblastoma and errors in diagnosis continue to be made worldwide. A better noninvasive method for distinguishing retinoblastoma from pseudo retinoblastoma is needed.</p><p><strong>Methods: </strong>RetCam imaging of retinoblastoma and pseudo retinoblastoma from the largest retinoblastoma center in the U.S. (Memorial Sloan Kettering Cancer Center, New York, NY) were used for this study. We used several neural networks (ResNet-18, ResNet-34, ResNet-50, ResNet-101, ResNet-152, and a Vision Image Transformer, or VIT), using 80% of images for training, 10% for validation, and 10% for testing.</p><p><strong>Results: </strong>Two thousand eight hundred eighty-two RetCam images from patients with retinoblastoma at diagnosis, 1,970 images from pseudo retinoblastoma at diagnosis, and 804 normal pediatric fundus images were included. The highest sensitivity (98.6%) was obtained with a ResNet-101 model, as were the highest accuracy and F1 scores of 97.3% and 97.7%. The highest specificity (97.0%) and precision (97.0%) was attained with a ResNet-152 model.</p><p><strong>Conclusion: </strong>Our machine learning algorithm successfully distinguished retinoblastoma from retinoblastoma with high specificity and sensitivity and if implemented worldwide will prevent hundreds of eyes from incorrectly being surgically removed yearly.</p>","PeriodicalId":19594,"journal":{"name":"Ophthalmic Genetics","volume":" ","pages":"1-6"},"PeriodicalIF":1.2,"publicationDate":"2025-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143008005","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Ophthalmic Genetics
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