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Challenges for the application of pharmacogenomics associated with the nomenclature of allelic variants. 与等位基因变体命名相关的药物基因组学应用的挑战。
IF 2.1 4区 医学 Q3 PHARMACOLOGY & PHARMACY Pub Date : 2023-10-01 Epub Date: 2023-10-17 DOI: 10.2217/pgs-2023-0160
Nadine de Godoy Torso, Paulo Caleb Jl Santos, Patricia Moriel
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引用次数: 0
Distribution of pharmacogene allele and phenotype frequencies in Brazilian psychiatric patients. 巴西精神病患者药物基因等位基因和表型频率的分布。
IF 2.1 4区 医学 Q3 PHARMACOLOGY & PHARMACY Pub Date : 2023-09-01 Epub Date: 2023-10-17 DOI: 10.2217/pgs-2023-0075
Guido Boabaid May, Bruna Raquel de Souza, Bárbara Yasmin Gueuvoghlanian-Silva, Esther Camilo Dos Reis, Sofia Rech Mostardeiro, Paula Pedrassani Boabaid May, Elvis Cueva Mateo, Giovanna Grunewald Vietta, Giovana Weber Hoss

Purpose: This work was designed to identify the pharmacogenetic profile of Brazilian psychiatric patients receiving psychoactive drug treatment according to ethnicity. Methods: Based on the GnTech® database, this cross-sectional study analyzed data from self-reported sociodemographic and genetic results from the next-generation sequencing panel composed of 26 pharmacogenes from 359 psychotropic drug users. Results: Variant frequencies of multiple pharmacogenes presented differences between ethnicities (CYP3A5, CYP2D6, CYP1A2, CYP2B6, CYP3A4, UGT1A4, UGT2B15, ABCB1 rs1045642, ADRA2A rs1800544, COMT rs4680, GRIK4 rs1954787, GSK3B rs334558, GSK3B rs6438552, HTR1A rs6295, HTR2A rs7997012, HTR2C rs1414334, MTHFR rs1801131, OPRM1 rs1799971 and 5-HTTLPR), endorsing the necessity of individual-level analyses in drug treatment. Conclusion: A discussion of pharmacogenomic test implementation in psychiatric clinical practice is needed to improve treatment choices, especially in Brazil, a multiethnic country.

目的:本研究旨在根据种族确定接受精神药物治疗的巴西精神病患者的药物遗传学特征。方法:基于GnTech®数据库,这项横断面研究分析了由359名精神药物使用者的26个药物基因组成的下一代测序小组的自我报告的社会人口学和遗传学结果的数据。结果:多种药物基因的变异频率在种族之间存在差异(CYP3A5、CYP2D6、CYP1A2、CYP2B6、CYP3A4、UGT1A4、UGT2B15、ABCB1 rs1045642、ADRA2A rs1800544、COMT rs4680、GRIK4 rs1954787、GSK3B rs334558、GSK3B rs6438552、HTR1A rs6295、HTR2A rs7997012、HTR2C rs1414334、MTHFR rs1801131、OPRM1 rs1799971和5-HTTLPR),赞同在药物治疗中进行个体水平分析的必要性。结论:需要讨论药物基因组测试在精神病临床实践中的实施,以改善治疗选择,尤其是在巴西这个多民族国家。
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引用次数: 0
HLA-B*57:01 typing in a Malaysian cohort: implications of abacavir hypersensitivity in people living with HIV. 马来西亚队列中的HLA-B*57:01分型:HIV感染者阿巴卡韦超敏反应的意义。
IF 2.1 4区 医学 Q3 PHARMACOLOGY & PHARMACY Pub Date : 2023-09-01 Epub Date: 2023-09-28 DOI: 10.2217/pgs-2023-0136
V Kalidasan, Iswarya Kunalan, Reena Rajasuriar, Vijay Kumar Subbiah, Kumitaa Theva Das

Background: Abacavir (ABC) in combination with other antiretroviral drugs, is used to treat people living with HIV (PLWH). However, it is linked to a fatal hypersensitivity reaction in susceptible individuals, and is strongly associated with the HLA-B*57:01 allele. Materials & methods: A total of 152 patients, 50 PLWH and 102 HIV-1 negative patients, were assessed for the HLA-B*57:01 allele through a sequence-specific primer PCR. Results: All PLWH tested negative for the HLA-B*57:01 allele, but two HIV-negative patients were found to have HLA-B*57, with one of them expressing the HLA-B*57:01 allele. Conclusion: Given the low prevalence of this risk allele in the population, testing for the presence of HLA-B*57:01 in PLWH may not provide significant benefit for the reported population.

背景:阿巴卡韦(ABC)与其他抗逆转录病毒药物联合用于治疗艾滋病毒感染者(PLWH)。然而,它与易感个体的致命超敏反应有关,并与HLA-B*57:01等位基因密切相关。材料与方法:采用序列特异性引物聚合酶链式反应对152例患者(50例PLWH和102例HIV-1阴性患者)进行HLA-B*57:01等位基因检测。结果:所有PLWH的HLA-B*57:01等位基因检测结果均为阴性,但两名HIV阴性患者被发现具有HLA-B*57等位基因,其中一人表达HLA-B*57:001等位基因。结论:鉴于该风险等位基因在人群中的低患病率,检测PLWH中HLA-B*57:01的存在可能不会为报告的人群提供显著的益处。
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引用次数: 0
Severe systemic adverse reactions to ophthalmic timolol in a CYP2D6 homozygous *4 allele carrier: a case report. CYP2D6纯合子*4等位基因携带者对噻吗洛尔的严重全身性不良反应:一例报告。
IF 2.1 4区 医学 Q3 PHARMACOLOGY & PHARMACY Pub Date : 2023-09-01 Epub Date: 2023-09-15 DOI: 10.2217/pgs-2023-0122
Anna Bollinger, Chiara Jeiziner, Henriette E Meyer Zu Schwabedissen, Kurt E Hersberger, Samuel S Allemann, Céline K Stäuble

A woman with ocular hypertension suffered from severe bradycardia, hypotension and syncope attacks in temporal relation with ophthalmic timolol application. Topically applied timolol is nasally absorbed and has been shown to reach potentially relevant systemic concentrations. Timolol is mainly metabolized by CYP2D6, which exhibits interindividual metabolic capacity due to genetic variations. A reactive pharmacogenetic panel test identified the patient as a CYP2D6 homozygous *4 allele carrier, which has been associated with a poor metabolizer phenotype and lacking enzyme activity. Thus, the adverse drug reactions possibly resulted from increased systemic timolol exposure. This case report highlights that pharmacogenetic panel testing can contribute to safe and effective pharmacotherapy, even for topically applied drugs.

一名患有高眼压的女性在服用噻吗洛尔后出现严重的心动过缓、低血压和晕厥发作。局部应用噻吗洛尔经鼻吸收,并已显示达到潜在的相关全身浓度。Timolol主要由CYP2D6代谢,由于遗传变异,CYP2D6表现出个体间的代谢能力。一项反应性药物遗传学小组测试确定该患者为CYP2D6纯合子*4等位基因携带者,其与代谢表型差和缺乏酶活性有关。因此,药物不良反应可能是由于全身性噻吗洛尔暴露量增加所致。该病例报告强调,药物遗传学小组测试有助于安全有效的药物治疗,即使是局部应用的药物。
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引用次数: 1
Donor-derived cell free DNA as a biomarker in kidney transplantation. 供体来源的无细胞DNA作为肾移植中的生物标志物。
IF 2.1 4区 医学 Q3 PHARMACOLOGY & PHARMACY Pub Date : 2023-09-01 Epub Date: 2023-09-21 DOI: 10.2217/pgs-2023-0138
Tarek Abdulhadi, Louai Alrata, Casey Dubrawka, Gwendolyn Amurao, Sri Mahathi Kalipatnapu, Che Isaac, Shelden Rodrigues, Karen Marie Flores, Dema Yaseen Alsabbagh, Omar Alomar, Tarek Alhamad

The early detection of acute rejection in the allograft is important as it provides an opportunity for timely therapeutic intervention in order to preserve graft function and achieve longer graft survival. Donor-derived cell-free DNA (dd-cfDNA) has emerged as a new biomarker in the field of kidney transplantation. In this review, we used data from various studies to examine the role of dd-cfDNA in comparison to creatinine and donor-specific antibodies in the early detection of transplant rejection. We also reviewed the use of dd-cfDNA in other organ transplants as well as the challenges and potential future direction for dd-cfDNA as a diagnostic tool.

早期发现同种异体移植物的急性排斥反应是重要的,因为它为及时的治疗干预提供了机会,以保持移植物功能并实现更长的移植物存活时间。供体来源的无细胞DNA(dd-cfDNA)已成为肾移植领域的一种新的生物标志物。在这篇综述中,我们使用了来自各种研究的数据来检查dd-cfDNA与肌酸酐和供体特异性抗体在早期检测移植排斥反应中的作用。我们还回顾了dd-cfDNA在其他器官移植中的应用,以及dd-cfdDNA作为诊断工具的挑战和潜在的未来方向。
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引用次数: 1
Review of pharmacogenomics of psychiatric comorbidities in autism spectrum disorder. 孤独症谱系障碍中精神合并症的药物基因组学研究进展。
IF 2.1 4区 医学 Q3 PHARMACOLOGY & PHARMACY Pub Date : 2023-09-01 Epub Date: 2023-09-28 DOI: 10.2217/pgs-2023-0134
Aida Alvarez, Valentin Bote, Cristina Lamborena, Raquel Medina, Alexandre Serra-LLovich, Amaia Hervas, Maria J Arranz

Approximately 70% of individuals diagnosed with autism spectrum disorder (ASD) receive at least one psychotropic medication to treat comorbidities. However, the response to treatment with these drugs is far from satisfactory, with 30-50% of treated patients not responding adequately or developing severe and long-lasting side effects. There is strong evidence of the clinical utility of pharmacogenetics for the personalization of antipsychotic and antidepressant treatments in adult populations. However, the use of pharmacogenetic interventions for the personalization of treatment in ASD populations is minimal. The aim of this review is to summarize the findings of pharmacogenetic studies conducted in subjects with ASD and illustrate their utility in the personalization of treatment with psychoactive drugs in this population group.

大约70%被诊断为自闭症谱系障碍(ASD)的患者至少接受一种精神药物治疗合并症。然而,使用这些药物治疗的反应远不能令人满意,30-50%的接受治疗的患者反应不充分或出现严重而持久的副作用。有强有力的证据表明,药物遗传学在成人人群中对抗精神病药物和抗抑郁药物治疗的个性化方面具有临床实用性。然而,在ASD人群中,使用药物遗传学干预措施进行个性化治疗的情况很少。这篇综述的目的是总结在ASD受试者中进行的药物遗传学研究的结果,并说明它们在该人群中精神活性药物个性化治疗中的实用性。
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引用次数: 0
Integrating pharmacogenomic testing into paired germline and somatic genomic testing in patients with cancer. 将药物基因组检测整合到癌症患者的配对种系和体细胞基因组检测中。
IF 2.1 4区 医学 Q3 PHARMACOLOGY & PHARMACY Pub Date : 2023-08-01 Epub Date: 2023-09-13 DOI: 10.2217/pgs-2023-0125
Nathan D Seligson, Jill M Kolesar, Benish Alam, Laura Baker, Jatinder K Lamba, Brooke L Fridley, Ameen A Salahudeen, Daniel L Hertz, J Kevin Hicks

Precision medicine has revolutionized clinical care for patients with cancer through the development of targeted therapy, identification of inherited cancer predisposition syndromes and the use of pharmacogenetics to optimize pharmacotherapy for anticancer drugs and supportive care medications. While germline (patient) and somatic (tumor) genomic testing have evolved separately, recent interest in paired germline/somatic testing has led to an increase in integrated genomic testing workflows. However, paired germline/somatic testing has generally lacked the incorporation of germline pharmacogenomics. Integrating pharmacogenomics into paired germline/somatic genomic testing would be an efficient method for increasing access to pharmacogenomic testing. In this perspective, the authors argue for the benefits of implementing a comprehensive approach integrating somatic and germline testing that is inclusive of pharmacogenomics in clinical practice.

精准医学通过开发靶向治疗、识别遗传性癌症易感性综合征以及使用药物遗传学优化抗癌药物和支持性护理药物的药物治疗,彻底改变了癌症患者的临床护理。虽然种系(患者)和体细胞(肿瘤)基因组检测已经分别发展,但最近对配对种系/体细胞检测的兴趣导致了综合基因组检测工作流程的增加。然而,配对种系/体细胞检测通常缺乏种系药物基因组学的结合。将药物基因组学纳入配对种系/体细胞基因组测试将是增加药物基因组测试机会的有效方法。从这个角度来看,作者认为在临床实践中实施一种综合体细胞和种系检测的方法是有益的,该方法包括药物基因组学。
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引用次数: 1
Effects of CYP3A4 and CYP2C9 genotype on systemic anastrozole and fulvestrant concentrations in SWOG S0226. CYP3A4和CYP2C9基因型对SWOG S0226中系统阿那曲唑和富维司琼浓度的影响。
IF 1.9 4区 医学 Q3 PHARMACOLOGY & PHARMACY Pub Date : 2023-08-01 Epub Date: 2023-08-24 DOI: 10.2217/pgs-2023-0097
Delaney V Rutherford, Sarah Medley, Nicholas C Henderson, Christina L Gersch, Ted A Vandenberg, Kathy S Albain, Shaker R Dakhil, Nagendra R Tirumali, Julie R Gralow, Gabriel N Hortobagyi, Lajos Pusztai, Rita S Mehta, Daniel F Hayes, Kelley M Kidwell, N Lynn Henry, William E Barlow, James M Rae, Daniel L Hertz

Objective & methods: This study tested associations of genotype-predicted activity of CYP3A4, other pharmacogenes, SLC28A7 (rs11648166) and ALPPL2 (rs28845026) with systemic concentrations of the endocrine therapies anastrozole and fulvestrant in SWOG S0226 trial participants. Results: Participants in the anastrozole-only arm with low CYP3A4 activity (i.e. CYP3A4*22 carriers) had higher systemic anastrozole concentrations than patients with high CYP3A4 activity (β-coefficient = 10.03; 95% CI: 1.42, 18.6; p = 0.025). In an exploratory analysis, participants with low CYP2C9 activity had lower anastrozole concentrations and higher fulvestrant concentrations than participants with high CYP2C9 activity. Conclusion: Inherited genetic variation in CYP3A4 and CYP2C9 may affect concentrations of endocrine therapy and may be useful to personalize dosing and improve treatment outcomes.

目的与方法:本研究在SWOG S0226试验参与者中测试了CYP3A4、其他药物基因、SLC28A7(rs11648166)和ALPPL2(rs28845026)的基因型预测活性与内分泌疗法阿那曲唑和富维司琼的全身浓度的相关性。结果:CYP3A4活性低的仅阿曲唑组(即CYP3A4*22携带者)的参与者的全身阿曲唑浓度高于CYP3A4活力高的患者(β-系数=10.03;95%CI:1.42,18.6;p=0.025)。在一项探索性分析中,具有低CYP2C9活性的参与者具有比具有高CYP2C9活动的参与者更低的阿那曲唑浓度和更高的富维司琼浓度。结论:CYP3A4和CYP2C9的遗传变异可能影响内分泌治疗的浓度,并可能有助于个性化给药和改善治疗结果。
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引用次数: 0
Effect of OPRM1/COMT gene polymorphisms on sufentanil labor analgesia: a cohort study based on propensity score matching. OPRM1/COMT基因多态性对舒芬太尼分娩镇痛的影响:一项基于倾向评分匹配的队列研究。
IF 2.1 4区 医学 Q3 PHARMACOLOGY & PHARMACY Pub Date : 2023-08-01 Epub Date: 2023-08-23 DOI: 10.2217/pgs-2023-0103
Yao Chen, Quanyao Chen, Can Cai, Xiuxian Lin, Weiwei Yu, Huiqiong Huang, Wenmin Xie, Min Lin, Weida Chen, Hui Wu, Tingting Su, Lingsong Wang

Background: This study investigated the use of COMT G1947A and OPRM1 A118G polymorphisms as predictive markers for sufentanil epidural analgesia. Methods: The visual analogue scale (VAS) score, and sufentanil consumption of 136 pairs of parturients using sufentanil with lidocaine and ropivacaine for epidural analgesia were used for analysis. Results: OPRM1 AG/GG had lower VAS score difference between fifth and 0 min (1.55 vs 1.87; p = 0.012) and higher consumption (19.65 μg vs 17.11 μg; p = 0.049) than AA carriers. COMT GA/AA had higher VAS score difference than GG carriers (1.86 vs 1.55; p = 0.021). Conclusion: Sufentanil may provide better epidural labor analgesia in OPRM1 AA and COMT GA/AA carriers compared with OPRM1 AG/GG and COMT GG carriers. Clinical Trial Registration: ChiCTR1900026897 (Chinese Clinical Trial Center Registry).

背景:本研究探讨了COMT G1947A和OPRM1 A118G多态性作为舒芬太尼硬膜外镇痛预测标志物的应用。方法:采用视觉模拟量表(VAS)评分和136对舒芬太尼联合利多卡因和罗哌卡因硬膜外镇痛产妇的舒芬太尼用量进行分析。结果:与AA携带者相比,OPRM1AG/GG在第5分钟和第0分钟的VAS评分差异较低(1.55 vs 1.87;p=0.012),消耗量较高(19.65μg vs 17.11μg;p=0.049)。结论:舒芬太尼对OPRM1-AA和COMT-GA/AA的硬膜外分娩镇痛效果优于OPRM1-AG/GG和COMT-GG。临床试验注册:ChiCTR1900026897(中国临床试验中心注册处)。
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引用次数: 0
Interethnic differences in drug response: projected impact of genetic variations in the Saudi population. 药物反应的种族间差异:沙特人口基因变异的预测影响。
IF 2.1 4区 医学 Q3 PHARMACOLOGY & PHARMACY Pub Date : 2023-08-01 Epub Date: 2023-08-23 DOI: 10.2217/pgs-2023-0105
Abdullah Alsultan, Abdullah A Alalwan, Bashayer Alshehri, Majed Al Jeraisy, Jahad Alghamdi, Saeed Alqahtani, Ahmed A Albassam
Ethnicity is known to have an impact on drug responses. This is particularly important for drugs that have a narrow therapeutic window, nonlinearity in pharmacokinetics and are metabolized by enzymes that demonstrate genetic polymorphisms. However, most clinical trials are conducted among Caucasians, which might limit the usefulness of the findings of such studies for other ethnicities. The representation of participants from Saudi Arabia in global clinical trials is low. Therefore, there is a paucity of evidence to assess the impact of ethnic variability in the Saudi population on drug response. In this article, the authors assess the projected impact of genetic polymorphisms in drug-metabolizing enzymes and drug targets on drug response in the Saudi population.
众所周知,种族对药物反应有影响。这对于治疗窗口狭窄、药代动力学非线性且由表现出遗传多态性的酶代谢的药物尤其重要。然而,大多数临床试验都是在高加索人中进行的,这可能会限制此类研究结果对其他种族的有用性。来自沙特阿拉伯的参与者在全球临床试验中的代表性很低。因此,缺乏证据来评估沙特人口的种族差异对药物反应的影响。在这篇文章中,作者评估了药物代谢酶和药物靶点的遗传多态性对沙特人群药物反应的预期影响。
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引用次数: 1
期刊
Pharmacogenomics
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