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Synthesis, Crystal Structure, Hirshfeld Surface Analyses and Biological Activity of Novel Cinnamide Derivatives as Neuroprotective Drugs 作为神经保护药物的新型肉桂衍生物的合成、晶体结构、Hirshfeld 表面分析和生物活性
IF 2.4 3区 化学 Q2 CHEMISTRY, ORGANIC Pub Date : 2024-09-13 DOI: 10.1080/10406638.2023.2261586
The p-methoxycinnamoyl group contained in the compounds extracted from Scrophularia buergeriana, which is a traditional medicinal herb in China, exhibits a remarkable neuroprotective effect. Based on the p-methoxycinnamoyl group, these two cinnamide derivatives, namely, (E)-3-(4-bromophenyl)-1-(4-(4-chlorobenzyl)piperazin-1-yl)prop-2-en-1-one (6a) and (E)-1-(4-(4-chlorobenzyl)piperazin-1-yl)-3-(4-chlorophenyl)prop-2-en-1-one (6b), were designed and synthesized. The target compounds were represented by High-resolution mass spectra, 1H NMR spectra, 13C NMR spectra, and single-crystal X-ray diffraction. According to the results of single-crystal X-ray diffraction, indicating that compound 6a crystallizes in the monoclinic system and compound 6b crystallizes in the triclinic system, and they both have a stacked-layer 3-D structure. Hirshfeld surface indicated that compounds 6a and 6b exist H…H, O…H, C…H, and π…π intermolecular interactions. Furthermore, their neuroprotective effects were further evaluated against glutamate-induced PC12 cell injury. These results indicate that the target compounds exhibit potent activities against glutamine-induced neurotoxicity in PC12 cells. In vivo experiments demonstrated that compounds 6a and 6b have good protective effects in high doses on bilateral common carotid artery ligation.
从中国传统药材 Scrophularia buergeriana 中提取的化合物所含的对甲氧基肉桂酰基具有显著的神经保护作用。以对甲氧基肉桂酰基为基础,设计并合成了两种肉桂酸衍生物,即(E)-3-(4-溴苯基)-1-(4-(4-氯苄基)哌嗪-1-基)丙-2-烯-1-酮(6a)和(E)-1-(4-(4-氯苄基)哌嗪-1-基)-3-(4-氯苯基)丙-2-烯-1-酮(6b)。对目标化合物进行了高分辨率质谱、1H NMR 光谱、13C NMR 光谱和单晶 X 射线衍射分析。单晶 X 射线衍射结果表明,化合物 6a 结晶于单斜晶系,化合物 6b 结晶于三斜晶系,它们都具有叠层三维结构。Hirshfeld表面表明,化合物6a和6b存在H...H、O...H、C...H和π...π分子间相互作用。此外,还进一步评估了它们对谷氨酸诱导的 PC12 细胞损伤的神经保护作用。这些结果表明,目标化合物对谷氨酸诱导的 PC12 细胞神经毒性具有强效活性。体内实验表明,大剂量的 6a 和 6b 化合物对双侧颈总动脉结扎具有良好的保护作用。
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引用次数: 0
One Pot Synthesis, Crystal Structure, Hirshfeld Studies, Docking Simulation and Antimicrobial Efficacy Assay of New Fused/Substituted Pyrazolinyl–Thiazolidinyl–Indolone Triheterocyclic Hybrid Scaffolds 新型融合/取代吡唑啉基-噻唑烷基-吲哚酮三杂环杂化支架的一锅合成、晶体结构、Hirshfeld 研究、Docking 模拟和抗菌效果分析
IF 2.4 3区 化学 Q2 CHEMISTRY, ORGANIC Pub Date : 2024-09-13 DOI: 10.1080/10406638.2023.2261585
In this present investigation, a new series of functionalized hybrid compounds containing three bioactive triheterocyclic templates, pyrazolines, thiazolidinones, and indolones are designed and synthesized via multicomponent, one-pot reaction of 3-(4-chlorophenyl)-5-[4-(propan-2-yl)phenyl]-4,5-dihydro-1H-pyrazole-1-carbothioamide with various substituted isatin derivatives and chloroacetic acid in the presence of fused sodium acetate and glacial acetic acid viz ring closure mechanism followed by dehydration. The formation of new scaffolds 4–7(a–c) is evidenced by analytical and spectral studies. The single-crystal X-ray diffraction study supported the molecular structure of compound 4a as a triclinic crystal system with a P1¯ space group and Z = 2. Interestingly, the compound is crystallized with two molecules (A/B) and one water molecule in the asymmetric unit, and the crystal packing is stabilized by intra and intermolecular hydrogen bonds. To quantify the percentage of intermolecular contacts and electrostatic potential distribution in crystal packing, Hirshfeld surface analysis was performed. All the compounds were screened for their preliminary antimicrobial activity against a panel of bacterial and fungal strains. The newly synthesized compounds exhibited fairly encouraging in vitro antibacterial activity, so the validation of the potent compound was done by docking against the antibacterial target Escherichia coli FabH (PDB: 5BNS). The virtual screening is focused on ADME and drug-likeliness properties to identify their putative ligand-protein interactions using Schrödinger software.
在本研究中,通过多组分设计和合成了一系列新的功能化杂化化合物,其中包含三种生物活性三环模板:吡唑、噻唑烷酮和吲哚酮、在熔融醋酸钠和冰醋酸存在下,通过 3-(4-氯苯基)-5-[4-(丙-2-基)苯基]-4,5-二氢-1H-吡唑-1-硫代甲酰胺与各种取代的异汀衍生物和氯乙酸的多组分单锅反应,设计并合成了 3-(4-氯苯基)-5-[4-(丙-2-基)苯基]-4,5-二氢-1H-吡唑-1-硫代甲酰胺。分析和光谱研究证明了新支架 4-7(a-c)的形成。单晶 X 射线衍射研究证实了化合物 4a 的分子结构为三菱晶系,具有 P1¯空间群和 Z = 2。有趣的是,该化合物的不对称单元中含有两个分子(A/B)和一个水分子,晶体的堆积通过分子内和分子间氢键而稳定。为了量化分子间接触的百分比和晶体堆积中的静电位分布,进行了 Hirshfeld 表面分析。对所有化合物进行了初步抗菌活性筛选,以检测其对细菌和真菌菌株的抗菌活性。新合成的化合物表现出相当令人鼓舞的体外抗菌活性,因此通过与抗菌靶标大肠杆菌 FabH(PDB:5BNS)的对接,对强效化合物进行了验证。虚拟筛选的重点是 ADME 和可药性,使用 Schrödinger 软件确定配体与蛋白质之间的相互作用。
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引用次数: 0
Microwave Assisted Greener and Eco-Friendly Approach for Synthesis of Functionalized 2-Arylbenzoxazoles, 2-Arylbenzothiazoles, and 2-Arylbenzimidazoles Using Waste Curd Water 利用腐乳废水合成功能化 2-芳基苯并恶唑、2-芳基苯并噻唑和 2-芳基苯并咪唑的微波辅助绿色环保方法
IF 2.4 3区 化学 Q2 CHEMISTRY, ORGANIC Pub Date : 2024-09-13 DOI: 10.1080/10406638.2023.2265023
Herein, we have designed a greener and efficient microwave-assisted route for the synthesis of functionalized 2-arylbenzoxazoles, 2-arylbenzothiazoles, and 2-arylbenzimidazoles. These compounds were produced through the condensation reaction involving 2-aminophenol, 2-aminothiophenol, and 1,2-phenylenediamine, respectively, with corresponding aldehydes. Remarkably, this reaction was conducted employing waste curd water as a catalytic solvent and under the influence of microwave radiation. Curd water, a liquid byproduct obtained from the coagulation process during cheese or yogurt production, was harnessed as catalytic solvent for the reaction. The application of emerging microwave-assisted chemistry techniques in combination with greener reaction media dramatically reduces reaction time as well as chemical waste. This investigation not only demonstrates a waste-to-wealth paradigm but also contributes to the mitigation of environmental waste.
在此,我们设计了一种更环保、更高效的微波辅助路线,用于合成功能化的 2-芳基苯并恶唑、2-芳基苯并噻唑和 2-芳基苯并咪唑。这些化合物分别是通过 2-氨基苯酚、2-氨基苯硫酚和 1,2-苯二胺与相应的醛发生缩合反应生成的。值得注意的是,这一反应是利用废凝乳水作为催化溶剂,并在微波辐射的影响下进行的。凝乳水是奶酪或酸奶生产过程中凝结过程中产生的一种液态副产品,被用作反应的催化溶剂。将新兴的微波辅助化学技术与更环保的反应介质相结合,可大大减少反应时间和化学废物。这项研究不仅展示了变废为宝的模式,还有助于减少环境废物。
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引用次数: 0
Structure, Frontier Molecular Orbitals, MEP, Charge Analysis, and NLO Study of 2,4-, 2,5-, and 2,6-Dimethylanilines Using DFT 利用 DFT 对 2,4-、2,5- 和 2,6-Dimethylanilines 进行结构、前沿分子轨道、MEP、电荷分析和 NLO 研究
IF 2.4 3区 化学 Q2 CHEMISTRY, ORGANIC Pub Date : 2024-09-13 DOI: 10.1080/10406638.2023.2261591
This study includes the evaluation of most stable structure, frontier molecular orbitals, molecular electrostatic potential (MEP), and nonlinear optical (NLO) parameters of 2,4-dimethylaniline (2,4DMA), 2,5-dimethylaniline (2,5DMA), and 2,6-dimethylaniline (2,6DMA) using density functional theory (DFT) employing B3LYP functional with 6-311++G(d,p) basis set. HOMO-LUMO energies, band gap energies, and global reactivity descriptors were obtained from the optimized structures. The band gap energy was determined as 3.7865, 3.9348, and 3.9443 eV for 2,4DMA, 25DMA, and 2,6DMA, respectively. The reactive sites of the molecules were obtained from the molecular electrostatic potential energy. The NLO parameters such as dipole moment, polarizability, and hyperpolarizability have been investigated for the title molecules. The investigated dipole moment and first-order hyperpolarizability values are higher than the prototypical value of urea and show good NLO behavior. The NMR chemical shifts, electronic absorption spectra, and charge distribution of atoms were calculated theoretically. Furthermore, thermodynamic and rotational constants were also calculated.
本研究采用密度泛函理论 (DFT),使用 6-311++G(d,p) 基集的 B3LYP 函数,对 2,4 二甲基苯胺 (2,4DMA)、2,5 二甲基苯胺 (2,5DMA) 和 2,6 二甲基苯胺 (2,6DMA) 的最稳定结构、前沿分子轨道、分子静电位 (MEP) 和非线性光学 (NLO) 参数进行了评估。从优化结构中获得了 HOMO-LUMO 能、带隙能和全局反应性描述符。经测定,2,4DMA、25DMA 和 2,6DMA 的带隙能分别为 3.7865、3.9348 和 3.9443 eV。根据分子静电势能得出了分子的反应位点。对标题分子的偶极矩、极化率和超极化率等 NLO 参数进行了研究。所研究的偶极矩和一阶超极化率值均高于脲的原型值,显示出良好的 NLO 行为。核磁共振化学位移、电子吸收光谱和原子的电荷分布都是通过理论计算得出的。此外,还计算了热力学常数和旋转常数。
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引用次数: 0
New Hybrid Compounds from Imidazole and 1,2,3-Triazole: efficient Synthesis of Highly Substituted Imidazoles and Construction of Their Novel Hybrid Compounds by Copper-Catalyzed Click Reaction 咪唑和 1,2,3-三唑的新型杂化化合物:铜催化点击反应高效合成高取代咪唑并构建其新型杂化化合物
IF 2.4 3区 化学 Q2 CHEMISTRY, ORGANIC Pub Date : 2024-09-13 DOI: 10.1080/10406638.2023.2261595
New hybrid compounds were successfully prepared from highly substituted imidazoles and 1,2,3-triazoles using copper-catalyzed click reactions. Also, an efficient method described for the synthesis of tri- and tetrasubstituted imidazoles in the presence of ZnCl2/urea as an efficient catalyst by multi-component reaction under solvent-free conditions. The advantages of this one-pot methodology are experimental simplicity, easy work-up, and afford desired products with high to excellent yields.
利用铜催化的点击反应,成功地从高度取代的咪唑和 1,2,3 三唑制备出了新的杂化化合物。此外,还介绍了一种在无溶剂条件下,以 ZnCl2/脲为高效催化剂,通过多组分反应合成三代和四代咪唑的有效方法。这种单锅方法的优点是实验简单、易于操作,并能以高产率甚至极高的产率获得所需的产品。
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引用次数: 0
QSPR Analysis of Some Important Drugs Used in Heart Attack Treatment via Degree-Based Topological Indices and Regression Models 通过基于度的拓扑指标和回归模型对用于心脏病治疗的一些重要药物进行 QSPR 分析
IF 2.4 3区 化学 Q2 CHEMISTRY, ORGANIC Pub Date : 2024-09-13 DOI: 10.1080/10406638.2023.2262697
Degree-based topological indices are very useful tools to model and characterize the molecular structure of drugs in order to predict their physicochemical properties without going into laborious and time-consuming laboratory experiments. These indices are numerical descriptors derived for the molecular structures using the principles of graph theory. Degree-based topological indices play a vital role in the QSPR analysis of heart attack drugs by providing molecular descriptors to predict their properties. The main goal of this paper is to compute six degree-based topological indices and a regression model for seven heart attack drugs. These drugs are nitroglycerin, clopidogrel, beta-blockers (metoprolol), ACE inhibitors (lisinopril), statins (atorvastatin), (ARBs) losartan, and beta-adrenergic blockers (propranolol). Regression analysis and degree-based indices correlate with various physicochemical properties related to drug activities, such as molecular weight, complexity, melting point, and boiling point. Correlations provide insights into how the molecular structure influences these properties, helping design and optimize new drugs. In the results, various statistical parameters are used to analyze heart attack drugs.
基于度的拓扑指数是非常有用的工具,可用于模拟和描述药物的分子结构,从而预测其理化性质,而无需进行费时费力的实验室实验。这些指数是利用图论原理得出的分子结构数值描述符。基于度的拓扑指数在心脏病药物的 QSPR 分析中发挥着重要作用,它提供了预测药物性质的分子描述符。本文的主要目的是计算七种心脏病药物的六个基于度的拓扑指数和一个回归模型。这些药物包括硝酸甘油、氯吡格雷、β-受体阻滞剂(美托洛尔)、ACE 抑制剂(利辛普利)、他汀类药物(阿托伐他汀)、(ARBs)洛沙坦和β-肾上腺素能阻滞剂(普萘洛尔)。回归分析和基于度的指数与与药物活性有关的各种理化性质(如分子量、复杂性、熔点和沸点)相关。通过相关性可以深入了解分子结构如何影响这些特性,从而帮助设计和优化新药。在研究结果中,使用了各种统计参数来分析心脏病药物。
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引用次数: 0
Acidic Ionic Liquids in Ultrasonic Irradiation Conditions Promote the Nucleophilic Addition to Chalcone Derivatives 超声辐照条件下的酸性离子液体促进查耳酮衍生物的亲核加成
IF 2.4 3区 化学 Q2 CHEMISTRY, ORGANIC Pub Date : 2024-09-13 DOI: 10.1080/10406638.2023.2259572
Under solvent-free conditions and with the help of ultrasonic irradiation, the synthesis of pyrano[3,2-c]chromen and pyrano[3,2-c]quinolin derivatives was promoted by four different ionic liquids. All reaction was performed at 100 °C and had good to excellent yields. 1-butyl-1-methylpyrrolidin-1-ium acetate (A), 1-butyl-1-methylpiperidin-1-ium acetate (B), N,N,N-triethylbutan-1-aminium acetate (C), and tetrabutylammonium acetate (D) as perfect ionic liquids for this reaction show remarkable catalytic activity. The work was simply developed for the reaction of chalcones with 4-hydroxy-1-methylquinolin-2(1H)-one/4-hydroxycoumarin to perform pure products of pyran heterocycles.
在无溶剂条件下,借助超声波照射,四种不同的离子液体促进了吡喃并[3,2-c]色烯和吡喃并[3,2-c]喹啉衍生物的合成。所有反应均在 100 ℃ 下进行,产率从良好到极佳。1-Butyl-1-methylpyrrolidin-1-ium acetate (A)、1-butyl-1-methylpiperidin-1-ium acetate (B)、N,N,N-triethylbutan-1-aminium acetate (C) 和 tetrabutylammonium acetate (D) 作为该反应的理想离子液体,显示出显著的催化活性。这项工作只是针对查耳酮与 4-羟基-1-甲基喹啉-2(1H)-酮/4-羟基香豆素的反应而开发的,目的是得到纯净的吡喃杂环产物。
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引用次数: 0
Microwave Hantzsch Synthesis of Quinolinyl-Dihydropyridines Supported by Cs-BNT Catalyst and DFT Investigations Cs-BNT 催化剂支持的喹啉基二氢吡啶的微波汉兹合成及 DFT 研究
IF 2.4 3区 化学 Q2 CHEMISTRY, ORGANIC Pub Date : 2024-09-13 DOI: 10.1080/10406638.2023.2265025
A novel catalyst of cesium-loaded boron nitride (Cs-BNT) was synthesized by stirring the materials at room temperature and was subsequently characterized by the spectroscopic techniques SEM, SEM-EDX, SEM-Mapping, TEM, Brunauer–Emmett–Teller (BET), DSC-TGA, Fourier transform infrared spectroscopy (FT-IR), and Raman spectrum. Furthermore, the catalyst of CsBN layer theoretically analyzed. The microwave method by Cs-BNT was used to synthesize novel heterocyclic quinoline-bearing dihydropyridines 5a-l and subsequently characterized using FT-IR, 1H NMR, 13C NMR, and mass spectrometry. An efficient, recyclable property of the catalyst was recognized, and it was observed that it could show more than five times efficiency in reusability without significant loss of its catalytic activity. The compound diethyl-6-amino-5-cyano-1-(4-fluorophenyl)-4-(2-methoxyquinolin-3-yl)-1,4-dihydropyridine-2,3-dicarboxylate hit compound revealed EHOMO-ELUMO as 4.00 eV indicating high stability of the molecule. The band structure, geometry, DOS, PDOS and Mulliken population based on DFT studies complemented the experimental results.
通过在室温下搅拌材料,合成了一种新型的铯载氮化硼(Cs-BNT)催化剂,随后利用扫描电镜、扫描电镜-EDX、扫描电镜-绘图、TEM、Brunauer-Emmett-Teller(BET)、DSC-TGA、傅立叶变换红外光谱(FT-IR)和拉曼光谱等光谱技术对其进行了表征。此外,还对 CsBN 层催化剂进行了理论分析。利用 Cs-BNT 的微波方法合成了含二氢吡啶的新型杂环喹啉 5a-l,并利用傅立叶变换红外光谱、1H NMR、13C NMR 和质谱对其进行了表征。研究发现,该催化剂具有高效、可回收的特性,其重复利用率可达五倍以上,且催化活性不会明显降低。化合物二乙基-6-氨基-5-氰基-1-(4-氟苯基)-4-(2-甲氧基喹啉-3-基)-1,4-二氢吡啶-2,3-二甲酸酯的 EHOMO-ELUMO 值为 4.00 eV,表明该分子具有很高的稳定性。基于 DFT 研究的能带结构、几何形状、DOS、PDOS 和 Mulliken population 补充了实验结果。
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引用次数: 0
Synthesis, Antifungal Activity, Molecular Docking Studies, RDG Analysis, and DFT Computations on Structural Vibrational and Electronic Spectra of 3,5-Diamino-1,2,4-Triazolinium Picrate 3,5-二氨基-1,2,4-三唑啉鎓吡啶甲酸盐的合成、抗真菌活性、分子对接研究、RDG 分析以及结构振动和电子能谱的 DFT 计算
IF 2.4 3区 化学 Q2 CHEMISTRY, ORGANIC Pub Date : 2024-09-13 DOI: 10.1080/10406638.2023.2266094
In this study, the antifungal compound 3,5-Diamino-1,2,4-Triazolinium picrate (3,5-DTAZPA) crystals were fully grown and characterized using FT-Raman and FT-IR experiment techniques. Computational methods of 3,5-DTAZPA were performed up to B3LYP with a 6–311++G (d, p) basis set. The Optimized geometry and natural bond orbital (NBO) analysis were been carried out with the help of density functional theory (DFT). The vibrational assignments related to different modes of vibrations were built up by normal coordinate analysis (NCA). Frontier molecular orbital theory (HOMO-LUMO), molecular electrostatic potential (MEP) and Fukui functions were computed. reduced density gradient (RDG), the electron density’s topology and hydrogen bonds were analyzed. The Kirby–Bauer method was employed to assess 3,5-DTAZPA compound’s in vitro antifungal properties against fungal strains. The docking calculations were also carried out with the target protein.
本研究采用傅立叶变换拉曼和傅立叶变换红外实验技术,对抗真菌化合物 3,5-二氨基-1,2,4-三唑啉鎓吡啶甲酸盐(3,5-DTAZPA)晶体进行了完全生长和表征。采用 6-311++G (d, p) 基集对 3,5-DTAZPA 进行了 B3LYP 计算。在密度泛函理论(DFT)的帮助下,进行了优化几何和天然键轨道(NBO)分析。与不同振动模式相关的振动赋值是通过正常坐标分析(NCA)建立起来的。计算了前沿分子轨道理论(HOMO-LUMO)、分子静电位(MEP)和 Fukui 函数,并分析了还原密度梯度(RDG)、电子密度拓扑结构和氢键。采用 Kirby-Bauer 法评估了 3,5-DTAZPA 化合物对真菌菌株的体外抗真菌特性。同时还与目标蛋白质进行了对接计算。
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引用次数: 0
Click Chemistry-Based Synthesis, Characterization, and DFT Studies of Some Novel 2-Acetylphenoxy-1,2,3-Triazoles 基于点击化学的一些新型 2-乙酰基苯氧基-1,2,3-三唑的合成、表征和 DFT 研究
IF 2.4 3区 化学 Q2 CHEMISTRY, ORGANIC Pub Date : 2024-09-13 DOI: 10.1080/10406638.2023.2259567
A series of the new 1,2,3-triazole-acetophenone hybrid system are synthesized from the click reaction between 1-(2-(prop-2-yn-1-yloxy)phenyl)ethan-1-one 1 and different azido benzene derivatives 2-7. All compounds are characterized by 1H NMR, 13C NMR, mass spectra, and elemental analyses. Field Emission Scanning Electron Microscope (FESEM) detected highly ordered aggregations, and the morphology of the compounds was determined, directed by van der Waals (vdW) forces and π-π stacking interactions. The Gaussian 09 and Gaussian view 6.0 softwares are used for all Density Functional Theory (DFT) calculations at the B3LYP. Band gap, molecular softness, electronegativity, and electrophilicity measurements show that molecule 9 is a soft molecule with higher polarizability, lower kinetic stability, and more chemical reactivity than the other molecules, which tend to be the most stable and least reactive. The molecules can be divided into two categories based on their chemical potential values: Although compound 9 looks to have more activity, compounds 8, 10, 11, 12, and 13 often have the best stability and least reactivity. According to the MEPs, the nitrogen and oxygen atoms are the electronegative potential sites in all compounds, while the hydrogen atoms in the alkyl and aromatic cyclic groups are the electropositive potential sites.
  1. Download: Download high-res image (396KB)
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通过 1-(2-(丙-2-炔-1-氧基)苯基)乙-1-酮 1 与不同叠氮苯衍生物 2-7 的点击反应,合成了一系列新的 1,2,3-三唑-苯乙酮杂化体系。所有化合物均通过 1H NMR、13C NMR、质谱和元素分析进行表征。场发射扫描电子显微镜(FESEM)检测到了高度有序的聚集,并在范德华力(vdW)和π-π堆积相互作用的引导下确定了化合物的形态。所有密度泛函理论(DFT)计算都使用了高斯 09 和高斯视图 6.0 软件,B3LYP。带隙、分子软度、电负性和亲电性测量结果表明,分子 9 是一种软分子,与其他分子相比,极化性较高,动力学稳定性较低,化学反应性较强,而其他分子往往是最稳定和反应性最低的。根据化学势值,分子可分为两类:虽然化合物 9 看起来活性更高,但化合物 8、10、11、12 和 13 通常稳定性最好,反应性最低。根据化学势值,氮原子和氧原子是所有化合物中的电负势位点,而烷基和芳香环基中的氢原子则是电正势位点:下载高清图片 (396KB)Download:下载全尺寸图片
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引用次数: 0
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Polycyclic Aromatic Compounds
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