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Correspondence on “Current Controversy in Prenatal Diagnosis: The Use of cfDNA to Screen for Monogenic Conditions in Low Risk Populations Is Ready for Clinical Use” 关于 "当前产前诊断中的争议:利用 cfDNA 筛查低风险人群中的单基因疾病已可用于临床 "的通信
IF 3 2区 医学 Q2 GENETICS & HEREDITY Pub Date : 2024-09-14 DOI: 10.1002/pd.6655
Julia Wynn, Jennifer Hoskovec
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引用次数: 0
Clinical Characteristics and Outcomes of Intrauterine Blood Transfusion (IUT) for Infectious Etiologies 感染性病因宫内输血 (IUT) 的临床特征和结果
IF 3 2区 医学 Q2 GENETICS & HEREDITY Pub Date : 2024-09-14 DOI: 10.1002/pd.6671
Jessian L. Munoz, Leticia Benitez, Cara Buskmiller, Ahmed A. Nassr, Michael A. Belfort, Magdalena Sanz Cortes, Roopali V. Donepudi
ObjectiveCongenital viral infection may result in fetal anemia and thrombocytopenia. While intrauterine blood transfusions (IUTs) are more commonly performed for Rh alloimmunization, reports using IUT for infection have varying success. Our primary objective was to characterize the outcomes of patients undergoing IUT for infectious etiologies at our center compared with Rh disease.Study DesignThis was a case series of patients undergoing IUT from 2012–2023. Infectious etiologies were identified by maternal serologies and confirmed by amniotic fluid polymerase chain reactions (PCR). Clinical outcomes were obtained from electronic medical records.ResultsDuring the study period, 70 patients underwent IUT, 34% (24/70) for Rh alloimmunization and 17% (12/70) for infection. Those with infectious etiologies were more likely to be diagnosed at earlier gestational ages (22 vs. 25 weeks, p = 0.04), with hydrops (75 vs. 33%, p = 0.03), and thrombocytopenia (27 ± 33 × 103 vs. 163 ± 112 × 103, p < 0.01). Perinatal death was significantly greater in cases of CMV (4/5, 80%) compared to parvovirus (1/7, 14%) or Rh alloimmunization (5/24, 21%) (p = 0.02).ConclusionAnemias and thrombocytopenias related to fetal infection may be indications for IUT. Compared with Rh alloimmunization, IUT in fetal infections was performed significantly earlier, and hydrops were more common at the time of IUT. In the case of CMV, greater rates of IUFD (80%) were observed. Patients should be counseled on the various outcomes by indication.
目的先天性病毒感染可能导致胎儿贫血和血小板减少。宫腔内输血(IUT)更常见于治疗 Rh 同种免疫,而治疗感染的 IUT 成功率却参差不齐。我们的主要目的是对本中心因感染性病因而接受宫内输血的患者的治疗效果进行分析,并与 Rh 病进行比较。感染性病因通过母体血清学鉴定,并通过羊水聚合酶链反应(PCR)确认。结果在研究期间,70 名患者接受了 IUT,34%(24/70)因 Rh 同种免疫,17%(12/70)因感染。感染性病因的患者更有可能在较早孕龄(22 周 vs. 25 周,p = 0.04)、水肿(75 vs. 33%,p = 0.03)和血小板减少(27 ± 33 × 103 vs. 163 ± 112 × 103,p <0.01)时确诊。与副病毒(1/7,14%)或Rh同种免疫(5/24,21%)相比,CMV(4/5,80%)病例的围产期死亡率明显更高(P = 0.02)。与 Rh 同种免疫相比,胎儿感染的 IUT 实施时间明显更早,且 IUT 时肾积水更为常见。在 CMV 感染的情况下,IUFD 的发生率更高(80%)。应就不同适应症的各种结果向患者提供咨询。
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引用次数: 0
Maternal Complications After Laser Surgery for Twin‐to‐Twin Transfusion Syndrome, a Cohort Study 双胎输血综合征激光手术后的产妇并发症队列研究
IF 3 2区 医学 Q2 GENETICS & HEREDITY Pub Date : 2024-09-11 DOI: 10.1002/pd.6663
M. Gijtenbeek, F. M. M. Prein, E. J. T. Verweij, J. M. Middeldorp, F. Slaghekke, M. C. Haak
ObjectivesTo assess maternal complications after fetoscopic laser surgery (FLS) for the twin‐to‐twin transfusion syndrome (TTTS).MethodsAll consecutive cases treated with FLS for TTTS between 2008 and 2021 at the Leiden University Medical Center (LUMC) were included. We allocated complications in three timeframes: “Admission for laser surgery,” “pregnancy after laser,” and “delivery and third stage of labor.” Maternal complications were graded according to the Maternal and Fetal Adverse Event Terminology (MFAET) and for intra‐abdominal hemorrhage, the Common Terminology Criteria for Adverse Events (CTCAE).ResultsIn the study period, 637 mothers were treated for TTTS with FLS. There were 1559 occurrences of maternal complications. The rate of severe maternal complications (grade 3 or 4) was 8.0%. Severe complications consisted of six cases of severe intra‐abdominal hemorrhage, nine cases of severe hemorrhage in pregnancy, one with severe chorioamnionitis, 10 with severe preeclampsia/HELLP syndrome, and 25 with a severe postpartum hemorrhage.ConclusionsEven though it is the gold standard for treating TTTS, FLS comes at a risk to the mother which should not be neglected. And even though not all complications have serious consequences to the mother, the severe maternal complication rate of 8.0% should be added to the inherent risks for the fetus, and should be discussed with patients eligible for surgery in order to make an informed decision on treatment options.
目的评估胎儿镜激光手术(FLS)治疗双胎输血综合征(TTTS)后的产妇并发症。方法纳入 2008 年至 2021 年期间在莱顿大学医学中心(LUMC)接受胎儿镜激光手术治疗 TTTS 的所有连续病例。我们将并发症分为三个时间段:"入院接受激光手术"、"激光术后妊娠 "和 "分娩和第三产程"。母体并发症根据母胎不良事件术语(MFAET)进行分级,腹腔内出血则根据不良事件通用术语标准(CTCAE)进行分级。共发生 1559 例产妇并发症。产妇严重并发症(3 级或 4 级)发生率为 8.0%。严重并发症包括 6 例严重腹腔内出血、9 例严重妊娠期出血、1 例严重绒毛膜羊膜炎、10 例严重子痫前期/HELLP 综合征和 25 例严重产后出血。尽管并非所有并发症都会对母亲造成严重后果,但 8.0% 的严重母体并发症发生率应与胎儿的固有风险相提并论,并应与符合手术条件的患者进行讨论,以便就治疗方案做出知情决定。
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引用次数: 0
SNPscan Combined With CNVplex as a High‐Performance Diagnostic Method for Thalassemia SNPscan 结合 CNVplex 作为地中海贫血症的高效诊断方法
IF 3 2区 医学 Q2 GENETICS & HEREDITY Pub Date : 2024-09-11 DOI: 10.1002/pd.6661
Xiaofeng Wei, Xingmin Wang, Fu Xiong, Xinhua Zhang, Dun Liu, Wanjun Zhou, Fei He, Xuan Shang
ObjectiveThalassemia is a Mendelian‐inherited blood disorder with severe consequences, including disability and mortality, making it a significant public health concern. Therefore, there is an urgent need for precise diagnostic technologies. We introduce two innovative diagnostic techniques for thalassemia, SNPscan and CNVplex, designed to enhance molecular diagnostics of thalassemia.MethodsThe SNPscan and CNVplex assays utilize variations in PCR product length and fluorescence to identify multiple mutations. In the SNPscan method, we designed three probes per locus: two 5′ and one 3′, and incorporated allele identification link sequences into one of the 5′ probes to distinguish the alleles. The detection system was designed for 67 previously reported loci in the Chinese population for a specific genetic condition. CNVplex identifies deletion types by analyzing the specific positions of probes within the globin gene. This innovative approach enables the detection of six distinct deletional mutations, enhancing the precision of thalassemia diagnostics. We evaluated and refined the methodologies in a training cohort of 100 individuals with confirmed HBA and HBB genotypes. The validation cohort, consisting of 1647 thalassemia patients and 100 healthy controls, underwent a double‐blind study. Traditional diagnostic techniques served as the control methods.ResultsIn the training set of 100 samples, 10 mutations (Hb QS, Hb CS, Hb Westmead, CD17, CD26, CD41‐42, IVS‐II‐654, ‐‐SEA, −α3.7 and −α4.2) were identified, consistent with those identified by traditional methods. The validation study showed that SNPscan/CNVplex offered superior molecular diagnostic capabilities for thalassemia, with 100% accuracy compared to 99.43% for traditional methods. Notably, the assay identified three previously undetected mutations in 10 cases, including two deletion mutations (Chinese Gγ(Aγδβ)0 del and SEA‐HPFH), and one non‐deletion mutation (Hb Q‐Thailand).ConclusionsThe SNPscan/CNVplex assay is a cost‐effective and user‐friendly tool for diagnosing thalassemia, demonstrating high accuracy and reliability, and showing great potential as a primary diagnostic method in clinical practice.
目标地中海贫血症是一种孟德尔遗传性血液疾病,具有严重的后果,包括残疾和死亡,是一个重大的公共卫生问题。因此,迫切需要精确的诊断技术。我们介绍了两种创新的地中海贫血诊断技术--SNPscan 和 CNVplex,旨在提高地中海贫血的分子诊断水平。方法SNPscan 和 CNVplex 检测法利用 PCR 产物长度和荧光的变化来识别多种突变。在 SNPscan 方法中,我们为每个位点设计了三个探针:两个 5′探针和一个 3′探针,并在其中一个 5′探针中加入了等位基因识别链接序列,以区分等位基因。该检测系统是针对中国人群中 67 个先前报告过的特定遗传病位点设计的。CNVplex 通过分析探针在球蛋白基因中的特定位置来识别缺失类型。这种创新方法能检测出六种不同的缺失突变,提高了地中海贫血诊断的精确度。我们在由 100 名确诊为 HBA 和 HBB 基因型的个体组成的训练队列中评估并改进了该方法。验证队列由 1647 名地中海贫血患者和 100 名健康对照者组成,并进行了双盲研究。结果在 100 个样本的训练集中,发现了 10 个突变(Hb QS、Hb CS、Hb Westmead、CD17、CD26、CD41-42、IVS-II-654、-SEA、-α3.7 和 -α4.2),与传统方法发现的突变一致。验证研究表明,SNPscan/CNVplex 具有卓越的地中海贫血分子诊断能力,准确率为 100%,而传统方法的准确率为 99.43%。结论 SNPscan/CNVplex 检测法是一种经济高效、操作简便的地中海贫血诊断工具,具有较高的准确性和可靠性,在临床实践中显示出作为一种主要诊断方法的巨大潜力。
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引用次数: 0
Imaging‐Based Prediction Parameters of Perinatal Morbidity and Mortality for Fetal Occipital Cephaloceles 基于成像的胎儿头枕部围产期发病率和死亡率预测参数
IF 3 2区 医学 Q2 GENETICS & HEREDITY Pub Date : 2024-09-11 DOI: 10.1002/pd.6660
Amber L. Gaulden, Usha D. Nagaraj, A. Scott Emmert, Shawn M. Vuong, Beth M. Kline‐Fath, Karin S. Bierbrauer, Smruti K. Patel
ObjectiveFetal occipital cephaloceles display significant morphologic heterogeneity resulting in variable cognitive and survival outcomes. The purpose of this study was to determine if specific imaging findings could provide predictive information on the clinical outcomes of patients with occipital cephalocele.MethodsWe conducted a retrospective review of fetal occipital cephalocele patients. Fetal and post‐natal imaging studies were evaluated for multiple parameters including: cephalocele size, ellipsoid volume, herniation of various neural tissues, and microcephaly. Based on the presence of certain findings, an imaging score (range: 0–11) and cephalocele grade (range: 0–4) were calculated.ResultsHigher fetal and post‐natal imaging scores were positively correlated with higher cephalocele grade (p < 0.0001). Higher cephalocele grade was positively correlated with cerebellum and occipital lobe involvement (p < 0.05). A higher fetal cephalocele grade was associated with a significantly high risk of mortality (CI: 15.5–22.10; p < 0.0001).ConclusionHigher imaging scores and cephalocele grade were associated with a greater risk of mortality and verbal and motor delays. Imaging factors that appear to play a role in increasing cephalocele grade include involvement of the cerebellum, occipital lobes, and microcephaly. These findings may help counsel parents regarding the post‐natal course of patients with occipital cephalocele.
目的胎儿枕部头颅畸形具有明显的形态异质性,导致不同的认知和存活结果。本研究的目的是确定特定的成像结果能否为枕部头颅畸形患者的临床预后提供预测信息。方法我们对胎儿枕部头颅畸形患者进行了回顾性研究。我们对胎儿和出生后的影像学检查进行了多参数评估,包括:头颅骨大小、椭圆体体积、各种神经组织疝出和小头畸形。结果 较高的胎儿和产后影像学评分与较高的头颅骨等级呈正相关(p <0.0001)。较高的头颅等级与小脑和枕叶受累呈正相关(p < 0.05)。结论较高的影像学评分和头颅分级与较高的死亡风险以及语言和运动迟缓有关。影像学因素似乎在增加头颅等级中起作用,包括小脑、枕叶受累和小头畸形。这些发现可能有助于就枕骨头颅畸形患者的产后病程为父母提供建议。
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引用次数: 0
Potentially Missed Diagnoses in Prenatal Versus Postnatal Exome Sequencing in the Lack of Informative Phenotype: Lessons Learned From a Postnatal Cohort. 在缺乏信息表型的情况下,产前与产后外显子组测序的潜在漏诊:从产后队列中汲取的教训》。
IF 2.7 2区 医学 Q2 GENETICS & HEREDITY Pub Date : 2024-09-05 DOI: 10.1002/pd.6659
Dana Brabbing-Goldstein, Lily Bazak, Noa Ruhrman-Shahar, Gabriel Arie Lidzbarsky, Naama Orenstein, Marina Lifshiz-Kalis, Nurit Asia-Batzir, Yael Goldberg, Lina Basel-Salmon

Objective: To investigate how many novel pathogenic (P) and likely pathogenic (LP) nonprotein-truncating or noncanonical splicing variants would be classified as variants of unknown significance (VUS) if they were detected in fetuses without abnormalities.

Methods: The study included 156 patients with neurodevelopmental disorders diagnosed through postnatal exome sequencing. Causative P/LP nonprotein-truncating and noncanonical splicing variants were retrospectively reclassified in cases without specific prenatal manifestations, disregarding postnatal symptoms.

Results: Of the 156 patients, 72 had a nontruncating or noncanonical splicing variant. Six patients were excluded for having more than one possible causative variant. Twelve patients had prenatal malformations known to be associated with the diagnosed disorder; therefore, variant interpretation remained unchanged. In 33 of the 54 remaining cases, the variant had been previously reported as P/LP. Reclassification of the other 21 LP/P variants revealed that 16 would have been classified as VUS if detected prenatally.

Conclusion: In our cohort, ∼24% (16/66) of causative nonprotein-truncating/noncanonical splicing variants would have been classified as VUS if sequencing had been conducted during pregnancy. The potential for false-negative results, stemming from limitations in the phenotypic information available prenatally, should be discussed with prospective parents. The criteria for classifying and reporting variants in the prenatal setting may require adjustment.

目的调查如果在无异常的胎儿中检测到新的致病性(P)和可能致病性(LP)非蛋白截断或非典型剪接变异,有多少变异会被归类为意义不明的变异(VUS):研究纳入了156名通过产后外显子组测序确诊的神经发育障碍患者。在没有特定产前表现的病例中,不考虑产后症状,对致病的P/LP非蛋白截断变异和非典型剪接变异进行了回顾性重新分类:结果:在 156 例患者中,72 例有非截断或非典型剪接变异。6名患者因有一个以上可能的致病变体而被排除在外。12名患者的产前畸形已知与所诊断的疾病有关;因此,对变异的解释保持不变。在剩余的 54 个病例中,有 33 个病例的变异先前被报告为 P/LP。对其他21个LP/P变异体进行重新分类后发现,如果在产前发现,其中16个变异体会被归类为VUS:结论:在我们的队列中,如果在孕期进行测序,24%(16/66)的致病性非蛋白截断/非调和剪接变异会被归类为 VUS。由于产前可获得的表型信息有限,可能会出现假阴性结果,因此应与准父母进行讨论。产前变异的分类和报告标准可能需要调整。
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引用次数: 0
Maternal Vascular Malperfusion and Anatomic Cord Abnormalities Are Prevalent in Pregnancies With Fetal Congenital Heart Disease. 患有胎儿先天性心脏病的孕妇普遍存在母体血管灌注不良和脐带解剖异常。
IF 2.7 2区 医学 Q2 GENETICS & HEREDITY Pub Date : 2024-08-30 DOI: 10.1002/pd.6650
Chrystalle Katte Carreon, Christina Ronai, Julia K Hoffmann, Wayne Tworetzky, Sarah U Morton, Louise E Wilkins-Haug

Objective: Impairments in the maternal-fetal environment are associated with adverse postnatal outcomes among infants with congenital heart disease. Therefore, we sought to investigate placental anomalies as they related to various forms of fetal congenital heart disease (FCHD).

Methods: We reviewed the placental pathology in singleton pregnancies with and without FCHD. FCHD was divided into separate categories (transposition physiology, obstructive left, obstructive right, biventricular without obstruction, and others). Exclusion criteria included other prenatally known structural malformations and/or aneuploidy. The significance threshold was set at p < 0.05 or False Discovery rate q < 0.05 when multiple tests were performed.

Results: The cohort included 215 FCHD and 122 non-FCHD placentas. FCHD placentas showed increased rates of maternal vascular malperfusion (24% vs. 5%, q < 0.001) and cord anomalies (27% vs. 1%, q < 0.001). Placentas with fetal TGA demonstrated a lower rate of hypoplasia when compared with other FCHD types (1/39 vs. 51/176, Fisher's exact p = 0.015).

Conclusion: Placental maternal vascular malperfusion is increased in FCHD. The prevalence of vascular malperfusion did not differ by FCHD type, indicating that CHD type does not predict the likelihood of placental vascular dysfunction. Further investigation of the placental-fetal heart axis in FCHD is warranted given the importance of placental health.

目的:母胎环境的损害与患有先天性心脏病的婴儿的不良产后预后有关。因此,我们试图研究胎盘异常与各种形式的胎儿先天性心脏病(FCHD)的关系:我们对患有和未患有先天性心脏病的单胎妊娠胎盘病理学进行了回顾性研究。胎盘先天性心脏病分为不同类别(转位性生理性、左侧梗阻性、右侧梗阻性、双室无梗阻性及其他)。排除标准包括产前已知的其他结构畸形和/或非整倍体。显著性阈值设定为 p 结果:组群包括215个FCHD胎盘和122个非FCHD胎盘。FCHD胎盘的母体血管灌注不良率增加(24% vs. 5%,q 结论:胎盘母体血管灌注不良在 FCHD 中增加。血管灌注不良的发生率并不因 FCHD 类型而异,这表明 CHD 类型并不能预测胎盘血管功能障碍的可能性。鉴于胎盘健康的重要性,有必要进一步研究 FCHD 胎盘-胎儿心脏轴。
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引用次数: 0
Characteristics and Outcomes of Fetal Cardiac Rhabdomyoma With or Without mTOR Inhibitors, a Systematic Review and Meta-Analysis. 使用或不使用 mTOR 抑制剂的胎儿心脏横纹肌瘤的特征和预后,一项系统性回顾和元分析。
IF 2.7 2区 医学 Q2 GENETICS & HEREDITY Pub Date : 2024-08-20 DOI: 10.1002/pd.6640
Hiba J Mustafa, Ali Javinani, Makayla L Morning, Francesco D'Antonio, Giorgio Pagani, Poonam M Puranik, Asma Khalil, Alireza A Shamshirsaz

Objectives: To investigate the characteristics and outcomes of fetal cardiac rhabdomyoma with or without prenatal use of mammalian target of rapamycin inhibitor (mTORi).

Search strategy: We systematically searched PubMed, Scopus, and Web of Science until June 2023.

Selection criteria: Studies reporting on pregnancies with fetal cardiac rhabdomyoma were included.

Data collection and analysis: A meta-analysis of proportions was conducted only on studies that included three or more cases.

Results: A systematic review included 61 studies reporting on 400 fetuses with cardiac rhabdomyoma, of which 52 studies (389 fetuses) had expectant management and 9 studies (11 fetuses) were managed with mTORi. The meta-analysis included 26 studies reporting on 354 fetuses. Prenatally, 14% (95% CI 4-36) had pericardial effusion, 13% (95% CI 6-27) had arrhythmia, 16% (95% CI 7-31) had outflow tract obstruction, and 10% (95% CI 4-21) had hydrops. Fetal demise occurred in 12% (95% CI 5-30). Before delivery, tumor size reduction was noted in 13%, and after birth in 58%. Following birth, 8% (95% CI 3-14) had neonatal death and 9% (95% 4-17) required cardiac surgery. 60% (95% CI 41-79) of cases were diagnosed with tuberous sclerosis. Seizures were reported only in cases with a tuberous sclerosis diagnosis (41/71 infants). For the 9 studies reporting all together on 11 fetuses with tuberous sclerosis receiving prenatal mTORi, they showed improvement in the size of cardiac rhabdomyoma as well as outflow obstruction and none had fetal demise or neonatal death, and none required postnatal cardiac surgery.

Conclusions: We report on the natural history of prenatal cardiac rhabdomyoma, including characteristics, progression, and survival. We report 11 fetuses with tuberous sclerosis and cardiac rhabdomyoma receiving prenatal mTORi, showing promising results.

目的:研究胎儿心脏横纹肌瘤的特征和预后:研究产前使用或不使用哺乳动物雷帕霉素靶抑制剂(mTORi)的胎儿心脏横纹肌瘤的特征和结局:我们系统地检索了PubMed、Scopus和Web of Science,直至2023年6月:数据收集与分析:数据收集和分析:仅对包含三个或三个以上病例的研究进行比例荟萃分析:结果:系统综述纳入了61项研究,报告了400名患有心脏横纹肌瘤的胎儿,其中52项研究(389名胎儿)采用了期待疗法,9项研究(11名胎儿)采用了mTORi疗法。荟萃分析包括 26 项研究,报告了 354 个胎儿的情况。产前,14%(95% CI 4-36)的胎儿出现心包积液,13%(95% CI 6-27)的胎儿出现心律失常,16%(95% CI 7-31)的胎儿出现流出道梗阻,10%(95% CI 4-21)的胎儿出现肾积水。12%(95% CI 5-30)的胎儿死亡。分娩前,13%的患者肿瘤缩小,分娩后,58%的患者肿瘤缩小。出生后,8%(95% CI 3-14)的新生儿死亡,9%(95% CI 4-17)的新生儿需要进行心脏手术。60%(95% CI 41-79)的病例被诊断为结节性硬化症。只有确诊为结节性硬化症的病例(41/71 例婴儿)才有癫痫发作的报告。9项研究共报告了11例接受产前mTORi治疗的结节性硬化症胎儿,结果显示,这些胎儿的心脏横纹肌瘤大小和流出道梗阻均有所改善,无一例胎儿死亡或新生儿死亡,也无一例需要进行产后心脏手术:我们报告了产前心脏横纹肌瘤的自然史,包括特征、进展和存活率。我们报告了11名患有结节性硬化症和心脏横纹肌瘤的胎儿接受产前mTORi治疗的情况,结果令人鼓舞。
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引用次数: 0
High-Resolution Haplotyping of the PAH Gene Enables Early Gestation Noninvasive Prenatal Diagnosis of Phenylketonuria and Evolution Analysis of Recurrent Pathogenic Variations. PAH 基因的高分辨率单倍型技术实现了苯丙酮尿症的早期妊娠无创产前诊断和复发性致病变异的进化分析。
IF 2.7 2区 医学 Q2 GENETICS & HEREDITY Pub Date : 2024-08-17 DOI: 10.1002/pd.6645
Jingqi Zhu, Zhenhua Zhao, Shaojun Li, Yifan Zhou, Lingrong Kong, Xinyu Fu, Huanyun Li, Jun Feng, Weiqin Tang, Di Wu, Xiangdong Kong

Background: The clinical performance of RHDO-based NIPD for PKU during early gestation remains under-evaluated. Furthermore, studies focused on SNP loci obtained by next-generation sequencing to analyze the genetic evolution of pathogenic variations in PKU is limited.

Methods: Maternal peripheral blood, along with proband and paternal samples, was collected between 7 and 12 weeks of gestation. The PAH gene and surrounding high heterozygosity SNPs were targeted for enrichment and sequencing. Fetal genotypes were inferred using RHDO-based NIPD. High-resolution PAH haplotypes were used for the analysis of two common pathogenic variants in the Chinese population: c.728G>A and c.1238G>C.

Results: Sixty one PKU families participated with an average fetal fraction of 6.08%. The median gestational age was 8+6 weeks. RHDO-based NIPD successfully identified fetal genotypes in 59 cases (96.72%, 59/62). Two cases failed because of insufficient informative SNPs. In addition, a recombination event was assessed in one fetus of 59 cases. Six, and three haplotypes were identified for c.728G>A(p.Arg243Gln) and c.1238G>C(p.Arg413Pro), respectively. Hap_3 and hap_8 were identified as the ancestral haplotypes for these pathogenic variants, with other haplotypes arising from mutations or recombination based on these ancestral haplotypes.

Conclusions: This study validates the feasibility of an RHDO-based assay for NIPD of PKU in early pregnancy and introduces its application in the demonstration of founder effects in recurrent pathogenic variations, offering new insights into the evolutionary analysis of PAH variations.

背景:基于RHDO的NIPD治疗妊娠早期PKU的临床表现仍未得到充分评估。此外,通过下一代测序获得的SNP位点来分析PKU致病变异遗传演变的研究也很有限:方法:在妊娠 7 至 12 周期间采集母体外周血以及 proband 和父方样本。针对 PAH 基因及其周围的高杂合度 SNP 进行了富集和测序。使用基于 RHDO 的 NIPD 推断胎儿基因型。高分辨率 PAH 单倍型用于分析中国人群中两种常见的致病变异:c.728G>A 和 c.1238G>C:61个PKU家庭参与了研究,平均胎儿比例为6.08%。中位胎龄为 8+6 周。基于 RHDO 的 NIPD 成功鉴定了 59 个病例的胎儿基因型(96.72%,59/62)。两个病例因信息 SNP 不足而失败。此外,59 例中有 1 例胎儿的基因重组事件得到了评估。c.728G>A(p.Arg243Gln) 和 c.1238G>C(p.Arg413Pro) 分别确定了 6 个和 3 个单倍型。Hap_3 和 hap_8 被确定为这些致病变体的祖先单倍型,其他单倍型是在这些祖先单倍型的基础上通过突变或重组产生的:本研究验证了基于 RHDO 检测法的妊娠早期 PKU NIPD 的可行性,并介绍了其在展示复发性致病变异的创始效应中的应用,为 PAH 变异的进化分析提供了新的视角。
{"title":"High-Resolution Haplotyping of the PAH Gene Enables Early Gestation Noninvasive Prenatal Diagnosis of Phenylketonuria and Evolution Analysis of Recurrent Pathogenic Variations.","authors":"Jingqi Zhu, Zhenhua Zhao, Shaojun Li, Yifan Zhou, Lingrong Kong, Xinyu Fu, Huanyun Li, Jun Feng, Weiqin Tang, Di Wu, Xiangdong Kong","doi":"10.1002/pd.6645","DOIUrl":"https://doi.org/10.1002/pd.6645","url":null,"abstract":"<p><strong>Background: </strong>The clinical performance of RHDO-based NIPD for PKU during early gestation remains under-evaluated. Furthermore, studies focused on SNP loci obtained by next-generation sequencing to analyze the genetic evolution of pathogenic variations in PKU is limited.</p><p><strong>Methods: </strong>Maternal peripheral blood, along with proband and paternal samples, was collected between 7 and 12 weeks of gestation. The PAH gene and surrounding high heterozygosity SNPs were targeted for enrichment and sequencing. Fetal genotypes were inferred using RHDO-based NIPD. High-resolution PAH haplotypes were used for the analysis of two common pathogenic variants in the Chinese population: c.728G>A and c.1238G>C.</p><p><strong>Results: </strong>Sixty one PKU families participated with an average fetal fraction of 6.08%. The median gestational age was 8<sup>+6</sup> weeks. RHDO-based NIPD successfully identified fetal genotypes in 59 cases (96.72%, 59/62). Two cases failed because of insufficient informative SNPs. In addition, a recombination event was assessed in one fetus of 59 cases. Six, and three haplotypes were identified for c.728G>A(p.Arg243Gln) and c.1238G>C(p.Arg413Pro), respectively. Hap_3 and hap_8 were identified as the ancestral haplotypes for these pathogenic variants, with other haplotypes arising from mutations or recombination based on these ancestral haplotypes.</p><p><strong>Conclusions: </strong>This study validates the feasibility of an RHDO-based assay for NIPD of PKU in early pregnancy and introduces its application in the demonstration of founder effects in recurrent pathogenic variations, offering new insights into the evolutionary analysis of PAH variations.</p>","PeriodicalId":20387,"journal":{"name":"Prenatal Diagnosis","volume":null,"pages":null},"PeriodicalIF":2.7,"publicationDate":"2024-08-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141996322","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Prenatal exome sequencing, a powerful tool for improving the description of prenatal features associated with genetic disorders. 产前外显子组测序是改善与遗传疾病相关的产前特征描述的有力工具。
IF 2.7 2区 医学 Q2 GENETICS & HEREDITY Pub Date : 2024-08-13 DOI: 10.1002/pd.6623
Christel Thauvin-Robinet, Aurore Garde, Julian Delanne, Caroline Racine, Thierry Rousseau, Emmanuel Simon, Michel François, Sebastien Moutton, Odent Sylvie, Chloe Quelin, Godelieve Morel, Alice Goldenberg, Anne-Marie Guerrot, Gabriella Vera, Nicolas Gruchy, Cindy Colson, Odile Boute, Carine Abel, Audrey Putoux, Jeanne Amiel, Agnes Guichet, Bertrand Isidor, Caroline Deiller, Constance Wells, Caroline Rooryck, Marine Legendre, Christine Francannet, Rodolphe Dard, Sabine Sigaudy, Ange-Line Bruel, Hana Safraou, Anne-Sophie Denommé-Pichon, Sophie Nambot, Marie-Laure Humbert Asensio, Christine Binquet, Yannis Duffourd, Antonio Vitobello, Christophe Philippe, Laurence Faivre, Frédéric Tran-Mau-Them, Nicolas Bourgon

Objective: Prenatal exome sequencing (pES) is now commonly used in clinical practice. It can be used to identifiy an additional diagnosis in around 30% of fetuses with structural defects and normal chromosomal microarray analysis (CMA). However, interpretation remains challenging due to the limited prenatal data for genetic disorders.

Method: We conducted an ancillary study including fetuses with pathogenic/likely pathogenic variants identified by trio-pES from the "AnDDI-Prenatome" study. The prenatal phenotype of each patient was categorized as typical, uncommon, or unreported based on the comparison of the prenatal findings with documented findings in the literature and public phenotype-genotype databases (ClinVar, HGMD, OMIM, and Decipher).

Results: Prenatal phenotypes were typical for 38/56 fetuses (67.9%). For the others, genotype-phenotype associations were challenging due to uncommon prenatal features (absence of recurrent hallmark, rare, or unreported). We report the first prenatal features associated with LINS1 and PGM1 variants. In addition, a double diagnosis was identified in three fetuses.

Conclusion: Standardizing the description of prenatal features, implementing longitudinal prenatal follow-up, and large-scale collection of prenatal features are essential steps to improving pES data interpretation.

目的:产前外显子组测序(pES)现已普遍应用于临床实践。约有 30% 的胎儿存在结构性缺陷,但染色体微阵列分析(CMA)结果正常。然而,由于遗传性疾病的产前数据有限,解释仍具有挑战性:方法:我们进行了一项辅助研究,包括 "AnDDI-Prenatome "研究中通过三重PES鉴定出致病/可能致病变异的胎儿。根据产前发现与文献和公共表型-基因型数据库(ClinVar、HGMD、OMIM 和 Decipher)中记录的结果的比较,将每位患者的产前表型分为典型、不常见或未报告:结果:38/56 个胎儿(67.9%)的产前表型是典型的。对于其他胎儿,由于不常见的产前特征(无复发性特征、罕见或未报告),基因型与表型之间的关联具有挑战性。我们首次报告了与 LINS1 和 PGM1 变体相关的产前特征。此外,在三个胎儿中发现了双重诊断:结论:规范产前特征描述、实施纵向产前随访和大规模收集产前特征是改进 pES 数据解读的必要步骤。
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Prenatal Diagnosis
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