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Optimization of Potent and Selective Cyclohexyl Acid ERAP1 Inhibitors Using Structure- and Property-Based Drug Design.
IF 3.5 3区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-11-06 eCollection Date: 2024-12-12 DOI: 10.1021/acsmedchemlett.4c00401
Ross P Hryczanek, Andrew S Hackett, Paul Rowland, Chun-Wa Chung, Máire A Convery, Duncan S Holmes, Jonathan P Hutchinson, Semra Kitchen, Justyna Korczynska, Robert P Law, Jonathan D Lea, John Liddle, Richard Lonsdale, Margarete Neu, Leng Nickels, Alex Phillipou, James E Rowedder, Jessica L Schneck, Paul Scott-Stevens, Hester Sheehan, Chloe L Tayler, Ioannis Temponeras, Christopher P Tinworth, Ann L Walker, Justyna Wojno-Picon, Robert J Young, David M Lindsay, Efstratios Stratikos

Endoplasmic reticulum aminopeptidase 1 (ERAP1) cleaves the N-terminal amino acids of peptides, which can then bind onto major histocompatibility class I (MHC-I) molecules for presentation onto the cell surface, driving the activation of adaptive immune responses. In cancer, overtrimming of mature antigenic peptides can reduce cytotoxic T-cell responses, and ERAP1 can generate self-antigenic peptides which contribute to autoimmune cellular responses. Therefore, modulation of ERAP1 activity has potential therapeutic indications for cancer immunotherapy and in autoimmune disease. Herein we describe the hit-to-lead optimization of a series of cyclohexyl acid ERAP1 inhibitors, found by X-ray crystallography to bind at an allosteric regulatory site. Structure-based drug design enabled a >1,000-fold increase in ERAP1 enzymatic and cellular activity, resulting in potent and selective tool molecules. For lead compound 7, rat pharmacokinetic properties showed moderate unbound clearance and oral bioavailability, thus highlighting the promise of the series for further optimization.

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引用次数: 0
Design, Synthesis, and Biological Evaluation of 3-Amino-pyrazine-2-carboxamide Derivatives as Novel FGFR Inhibitors 作为新型表皮生长因子受体抑制剂的 3-氨基吡嗪-2-甲酰胺衍生物的设计、合成和生物学评价
IF 3.5 3区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-11-05 DOI: 10.1021/acsmedchemlett.4c0043110.1021/acsmedchemlett.4c00431
Jia Zheng, Wei Zhang, Dan Ni, Shuang Zhao, Yi He, Junchi Hu, Linfeng Li, Yongjun Dang, Zufeng Guo* and Shenyou Nie*, 

FGFR has been considered a crucial oncogenic driver and promising target for cancer therapy. Herein, we reported the design and synthesis of 3-amino-N-(3,5-dihydroxyphenyl)-6-methylpyrazine-2-carboxamide derivatives as novel FGFR inhibitors. SAR exploration led to the identification of 18i as a pan-FGFR inhibitor with favorable in vitro activity against FGFR1–4. Moreover, 18i blocked the activation of FGFR and downstream signaling pathways at the submicromolar level and exhibited potent antitumor activity in multiple cancer cell lines with FGFR abnormalities. Molecular docking was performed to investigate the possible binding modes of 18i within the binding site of FGFR2. These results suggest that compound 18i is a promising candidate for further drug discovery.

表皮生长因子受体(FGFR)一直被认为是关键的致癌驱动因子和有希望的癌症治疗靶点。在此,我们报告了作为新型 FGFR 抑制剂的 3-氨基-N-(3,5-二羟基苯基)-6-甲基吡嗪-2-甲酰胺衍生物的设计与合成。通过 SAR 探索,发现 18i 是一种泛 FGFR 抑制剂,对 FGFR1-4 具有良好的体外活性。此外,18i 还能在亚摩尔水平上阻断 FGFR 和下游信号通路的激活,并在多种 FGFR 异常的癌细胞系中显示出强大的抗肿瘤活性。为了研究 18i 在 FGFR2 结合位点内的可能结合模式,进行了分子对接。这些结果表明,化合物 18i 是一种很有希望用于进一步药物开发的候选化合物。
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引用次数: 0
Design, Synthesis, and Biological Evaluation of 3-Amino-pyrazine-2-carboxamide Derivatives as Novel FGFR Inhibitors. 作为新型表皮生长因子受体抑制剂的 3-氨基吡嗪-2-甲酰胺衍生物的设计、合成和生物学评价。
IF 3.5 3区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-11-05 eCollection Date: 2024-11-14 DOI: 10.1021/acsmedchemlett.4c00431
Jia Zheng, Wei Zhang, Dan Ni, Shuang Zhao, Yi He, Junchi Hu, Linfeng Li, Yongjun Dang, Zufeng Guo, Shenyou Nie

FGFR has been considered a crucial oncogenic driver and promising target for cancer therapy. Herein, we reported the design and synthesis of 3-amino-N-(3,5-dihydroxyphenyl)-6-methylpyrazine-2-carboxamide derivatives as novel FGFR inhibitors. SAR exploration led to the identification of 18i as a pan-FGFR inhibitor with favorable in vitro activity against FGFR1-4. Moreover, 18i blocked the activation of FGFR and downstream signaling pathways at the submicromolar level and exhibited potent antitumor activity in multiple cancer cell lines with FGFR abnormalities. Molecular docking was performed to investigate the possible binding modes of 18i within the binding site of FGFR2. These results suggest that compound 18i is a promising candidate for further drug discovery.

表皮生长因子受体(FGFR)一直被认为是一种关键的致癌驱动因子和有希望的癌症治疗靶点。在此,我们报告了作为新型 FGFR 抑制剂的 3-氨基-N-(3,5-二羟基苯基)-6-甲基吡嗪-2-甲酰胺衍生物的设计与合成。通过 SAR 探索,发现 18i 是一种泛 FGFR 抑制剂,对 FGFR1-4 具有良好的体外活性。此外,18i 还能在亚摩尔水平上阻断 FGFR 和下游信号通路的激活,并在多种 FGFR 异常的癌细胞系中显示出强大的抗肿瘤活性。为了研究 18i 在 FGFR2 结合位点内的可能结合模式,进行了分子对接。这些结果表明,化合物 18i 是一种很有希望用于进一步药物开发的候选化合物。
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引用次数: 0
Discovery of Rezatapopt (PC14586), a First-in-Class, Small-Molecule Reactivator of p53 Y220C Mutant in Development.
IF 3.5 3区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-11-04 eCollection Date: 2025-01-09 DOI: 10.1021/acsmedchemlett.4c00379
Binh T Vu, Romyr Dominique, Bruce J Fahr, Hongju H Li, David C Fry, Lizhong Xu, Hong Yang, Anna Puzio-Kuter, Andrew Good, Binbin Liu, Kuo-Sen Huang, Naoko Tanaka, Thomas W Davis, Melissa L Dumble

p53 is a potent transcription factor that is crucial in regulating cellular responses to stress. Mutations in the TP53 gene are found in >50% of human cancers, predominantly occurring in the DNA-binding domain (amino acids 94-292). The Y220C mutation accounts for 1.8% of all of the TP53 mutations and produces a thermally unstable protein. Rezatapopt (also known as PC14586) is the first small-molecule p53 Y220C reactivator being evaluated in clinical trials. Rezatapopt was specifically designed to tightly bind to a pocket created by the TP53 Y220C mutation. By stabilization of the p53 protein structure, rezatapopt restores p53 tumor suppressor functions. In mouse models with established human tumor xenografts harboring the TP53 Y220C mutation, rezatapopt demonstrated tumor inhibition and regression at well-tolerated doses. In Phase 1 clinical trials, rezatapopt demonstrated a favorable safety profile within the efficacious dose range and showed single-agent efficacy in heavily pretreated patients with various TP53 Y220C mutant solid tumors.

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引用次数: 0
Azaspirooctane-carboxylates as Novel Activators/Modulators of M4 for the Treatment of Alzheimer’s Disease and Parkinson’s Disease 作为治疗阿尔茨海默病和帕金森病的新型 M4 激活剂/调节剂的氮杂环辛烷羧酸盐
IF 3.5 3区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-11-04 DOI: 10.1021/acsmedchemlett.4c0051210.1021/acsmedchemlett.4c00512
Gerard Rosse*, 

Novel azaspirooctane-carboxylates are described for potential treatment of Alzheimer’s disease and Parkinson’s disease, among other conditions.

介绍了新型氮杂螺辛烷羧酸盐用于治疗阿尔茨海默病和帕金森病等疾病的可能性。
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引用次数: 0
Discovery of l-Lysine Dioxalate (LH1513) as a Novel Inhibitor of Calcium Oxalate Crystallization for Hyperoxaluria 发现作为高草酸尿症草酸钙结晶抑制剂的 l-赖氨酸二噁醛酸盐 (LH1513)
IF 3.5 3区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-11-04 DOI: 10.1021/acsmedchemlett.4c0042310.1021/acsmedchemlett.4c00423
Longqin Hu*, Akash Taneja, Husam Zahid, Yiling Wang, Min Yang, Zhihua An, Xingsheng Li, Jay A. Tischfield, John Knight, Michael D. Ward and Amrik Sahota, 

Hyperoxaluria is caused by increased urinary excretion of oxalate leading to the formation of calcium oxalate (CaOx) stones. The lack of effective management strategies for hyperoxaluria prompted us to investigate molecular mimics as stone inhibitors, a strategy that we previously used successfully to discover small molecule inhibitors of l-cystine crystallization for the prevention of l-cystine stone formation in cystinuria. Herein, we report the discovery of l-lysine dioxalate (LH1513), a novel dioxamate derivative, as a more potent inhibitor of CaOx crystallization than citrate and pyruvate. Such inhibition was corroborated by in situ atomic force microscopy (AFM) measurements of crystal growth rates at the microscopic length scale. A triester prodrug of LH1513 was found to have sufficient oral bioavailability for a preliminary in vivo study demonstrating efficacy in preventing urinary CaOx crystal formation in an Agxt-knockout mouse model for hyperoxaluria.

高草酸尿症是由于尿液中草酸盐排泄量增加而形成草酸钙(CaOx)结石。高草酸尿症缺乏有效的治疗策略,这促使我们研究作为结石抑制剂的分子模拟物,我们以前曾用这种策略成功地发现了小分子胱氨酸结晶抑制剂,用于预防胱氨酸尿症中胱氨酸结石的形成。在此,我们报告发现了新型二恶英衍生物 l-lysine dioxalate(LH1513),它是一种比柠檬酸盐和丙酮酸盐更有效的 CaOx 结晶抑制剂。在微观长度范围内对晶体生长率进行的原位原子力显微镜(AFM)测量证实了这种抑制作用。研究发现,LH1513 的三酯原药具有足够的口服生物利用度,可用于一项初步体内研究,该研究表明,在 Agxt 基因敲除的高草酸尿症小鼠模型中,LH1513 能有效防止尿液中 CaOx 晶体的形成。
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引用次数: 0
Novel Aminopyrazole Inhibitors of PDE11A for the Treatment of Alzheimer's Disease and Other Types of Dementia. 用于治疗阿尔茨海默病和其他类型痴呆症的新型 PDE11A 氨基吡唑抑制剂。
IF 3.5 3区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-11-04 eCollection Date: 2024-11-14 DOI: 10.1021/acsmedchemlett.4c00513
Gerard Rosse
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引用次数: 0
Azaspirooctane-carboxylates as Novel Activators/Modulators of M4 for the Treatment of Alzheimer's Disease and Parkinson's Disease. 作为治疗阿尔茨海默病和帕金森病的新型 M4 激活剂/调节剂的氮杂环辛烷羧酸盐。
IF 3.5 3区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-11-04 eCollection Date: 2024-11-14 DOI: 10.1021/acsmedchemlett.4c00512
Gerard Rosse

Novel azaspirooctane-carboxylates are described for potential treatment of Alzheimer's disease and Parkinson's disease, among other conditions.

介绍了新型氮杂螺辛烷羧酸盐用于治疗阿尔茨海默病和帕金森病等疾病的可能性。
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引用次数: 0
Novel Aminopyrazole Inhibitors of PDE11A for the Treatment of Alzheimer’s Disease and Other Types of Dementia 用于治疗阿尔茨海默病和其他类型痴呆症的新型氨基吡唑 PDE11A 抑制剂
IF 3.5 3区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-11-04 DOI: 10.1021/acsmedchemlett.4c0051310.1021/acsmedchemlett.4c00513
Gerard Rosse*, 
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引用次数: 0
Discovery of l-Lysine Dioxalate (LH1513) as a Novel Inhibitor of Calcium Oxalate Crystallization for Hyperoxaluria. 发现作为高草酸尿症草酸钙结晶抑制剂的 l-赖氨酸二噁醛酸盐 (LH1513)。
IF 3.5 3区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-11-04 eCollection Date: 2024-11-14 DOI: 10.1021/acsmedchemlett.4c00423
Longqin Hu, Akash Taneja, Husam Zahid, Yiling Wang, Min Yang, Zhihua An, Xingsheng Li, Jay A Tischfield, John Knight, Michael D Ward, Amrik Sahota

Hyperoxaluria is caused by increased urinary excretion of oxalate leading to the formation of calcium oxalate (CaOx) stones. The lack of effective management strategies for hyperoxaluria prompted us to investigate molecular mimics as stone inhibitors, a strategy that we previously used successfully to discover small molecule inhibitors of l-cystine crystallization for the prevention of l-cystine stone formation in cystinuria. Herein, we report the discovery of l-lysine dioxalate (LH1513), a novel dioxamate derivative, as a more potent inhibitor of CaOx crystallization than citrate and pyruvate. Such inhibition was corroborated by in situ atomic force microscopy (AFM) measurements of crystal growth rates at the microscopic length scale. A triester prodrug of LH1513 was found to have sufficient oral bioavailability for a preliminary in vivo study demonstrating efficacy in preventing urinary CaOx crystal formation in an Agxt-knockout mouse model for hyperoxaluria.

高草酸尿症是由于尿液中草酸盐排泄量增加而形成草酸钙(CaOx)结石。高草酸尿症缺乏有效的治疗策略,这促使我们研究作为结石抑制剂的分子模拟物,我们以前曾用这种策略成功地发现了小分子胱氨酸结晶抑制剂,用于预防胱氨酸尿症中胱氨酸结石的形成。在此,我们报告发现了新型二恶英衍生物 l-lysine dioxalate(LH1513),它是一种比柠檬酸盐和丙酮酸盐更有效的 CaOx 结晶抑制剂。在微观长度范围内对晶体生长率进行的原位原子力显微镜(AFM)测量证实了这种抑制作用。研究发现,LH1513 的三酯原药具有足够的口服生物利用度,可用于一项初步体内研究,该研究表明,在 Agxt 基因敲除的高草酸尿症小鼠模型中,LH1513 能有效防止尿液中 CaOx 晶体的形成。
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引用次数: 0
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ACS Medicinal Chemistry Letters
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