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Deciphering the Selectivity of CBL-B Inhibitors Using All-Atom Molecular Dynamics and Machine Learning 利用全原子分子动力学和机器学习解密 CBL-B 抑制剂的选择性
IF 4.2 3区 医学 Q1 Chemistry Pub Date : 2024-06-05 DOI: 10.1021/acsmedchemlett.4c00047
Feng Zhou, Haolin Du, Yang Wang, Weiqiang Fu, Bingchen Zhao, Jielong Zhou, Yingsheng J. Zhang
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引用次数: 0
Stereospecific Synthesis and Biological Evaluation of KRN7000 Analogues with Thio-modifications at the Acyl Moiety 在酰基上进行硫代修饰的 KRN7000 类似物的立体特异性合成和生物学评价
IF 4.2 3区 医学 Q1 Chemistry Pub Date : 2024-06-05 DOI: 10.1021/acsmedchemlett.4c00199
Tianhui Hao, Tian Mi, Qinyu Chu, Wenjing Ma, Xi Cheng, Yi Zang, Jia Li, Tiehai Li
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引用次数: 0
Structural Modifications of Covalent Cathepsin S Inhibitors: Impact on Affinity, Selectivity, and Permeability 共价 Cathepsin S 抑制剂的结构修饰:对亲和性、选择性和渗透性的影响
IF 4.2 3区 医学 Q1 Chemistry Pub Date : 2024-06-04 DOI: 10.1021/acsmedchemlett.4c00050
Mergim Meta, Collin Zimmer, Natalie Fuchs, Maximilian Johannes Zecher, Albin Lahu and Tanja Schirmeister*, 

Cathepsin S (catS) is a member of the cysteine protease family with limited tissue distribution, which is predominantly found in antigen-presenting cells. Due to overexpression and overactivity of catS in numerous cancers, inhibition of catS is supposed to improve the antitumor response. Here, we explore the potential of small-molecule catS inhibitors emphasizing their in vitro pharmacodynamics and pharmacokinetics. Membrane permeability of selected inhibitors was measured with a Parallel Artificial Membrane Permeation Assay and correlated to calculated physicochemical parameters and inhibition data. The binding kinetics and inhibition types of potent and selective new inhibitors with unexplored warheads were investigated. Our unique approach involves reversible masking of these potent warheads, allowing for further customization without compromising affinity or selectivity. The most promising inhibitors in this study include covalent aldehyde and ketone derivatives reversibly masked as hydrazones as potential candidates for therapeutic interventions targeting catalytic enzymes and modulating the immune response in cancer.

Cathepsin S(catS)是半胱氨酸蛋白酶家族的一员,组织分布有限,主要存在于抗原递呈细胞中。由于 catS 在许多癌症中的过度表达和过度活性,抑制 catS 可改善抗肿瘤反应。在此,我们探讨了小分子 catS 抑制剂的潜力,强调了它们的体外药效学和药代动力学。通过平行人工膜渗透试验测量了所选抑制剂的膜渗透性,并将其与计算的理化参数和抑制数据进行了关联。研究了具有未开发弹头的强效选择性新抑制剂的结合动力学和抑制类型。我们的独特方法包括对这些强效弹头进行可逆屏蔽,从而在不影响亲和性或选择性的情况下进一步定制抑制剂。这项研究中最有前景的抑制剂包括可逆掩蔽为酰肼的共价醛和酮衍生物,它们是针对催化酶和调节癌症免疫反应的治疗干预的潜在候选物质。
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引用次数: 0
Synthesis Studies and the Evaluation of C6 Raloxifene Derivatives C6 雷洛昔芬衍生物的合成研究与评估
IF 4.2 3区 医学 Q1 Chemistry Pub Date : 2024-06-03 DOI: 10.1021/acsmedchemlett.4c00078
David R. Williams*, Levin Taylor IV, Gabriel A. Miter, Johnathan L. Sheiman, Joseph M. Wallace*, Matthew R. Allen, Rachel Kohler and Claudia Medeiros, 

Methodology is described for the synthesis of C6 derivatives of raloxifene, a prescribed drug for the treatment and prevention of osteoporosis. Studies have explored the incorporation of electron-withdrawing substituents at C6 of the benzothiophene core. Efficient processes are also examined to introduce hydrogen bond donor and acceptor functionality. Raloxifene derivatives are evaluated with in vitro testing to determine estrogen receptor (ER) binding affinity and gene expression in MC3T3 cells.

本文介绍了合成雷洛昔芬 C6 衍生物的方法,雷洛昔芬是一种治疗和预防骨质疏松症的处方药。研究探讨了在苯并噻吩核心的 C6 处加入抽电子取代基的方法。还研究了引入氢键供体和受体功能的有效过程。通过体外测试评估了雷洛昔芬衍生物,以确定其与雌激素受体(ER)的结合亲和力以及在 MC3T3 细胞中的基因表达。
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引用次数: 0
Imidazopyridine Compounds as ERK5 Inhibitors for Treating Cancer 作为 ERK5 抑制剂治疗癌症的咪唑吡啶化合物
IF 4.2 3区 医学 Q1 Chemistry Pub Date : 2024-06-03 DOI: 10.1021/acsmedchemlett.4c00228
Ram W. Sabnis*, 

Provided herein are novel imidazopyridine compounds as ERK5 inhibitors, pharmaceutical compositions, use of such compounds in treating cancer, and processes for preparing such compounds.

本文提供了作为 ERK5 抑制剂的新型咪唑吡啶化合物、药物组合物、此类化合物在治疗癌症中的用途以及制备此类化合物的工艺。
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引用次数: 0
Nonsymmetrically Substituted 1,1′-Biphenyl-Based Small Molecule Inhibitors of the PD-1/PD-L1 Interaction 非对称取代的 1,1′-联苯基 PD-1/PD-L1 相互作用小分子抑制剂
IF 4.2 3区 医学 Q1 Chemistry Pub Date : 2024-06-03 DOI: 10.1021/acsmedchemlett.4c00042
Aleksandra Hec-Gałązka, Urszula Tyrcha, Jan Barczyński, Przemyslaw Bielski, Michał Mikitiuk, Ganna P. Gudz, Radosław Kitel, Bogdan Musielak, Jacek Plewka, Tomasz Sitar* and Tad A. Holak*, 

Therapeutic antibodies directed against either programmed cell death-1 protein (PD-1) or its ligand PD-L1 have demonstrated efficacy in the treatment of various cancers. In contrast with antibodies, small molecules have the potential for increased tissue penetration; better pharmacology; and therefore, improved antitumor activity. A series of nonsymmetric C2 inhibitors were synthesized and evaluated for PD-1/PD-L1 interaction inhibition. These compounds induced PD-L1 dimerization and effectively blocked PD-L1/PD-1 interaction in a homogeneous time-resolved fluorescence (HTRF) assay with most inhibitors exhibiting IC50 values in the single-digit nM range and below. Their high inhibitory potency was also demonstrated in a cell-based coculture PD-1 signaling assay where 2 exhibited an EC50 inhibitory activity of 21.8 nM, which approached that of the PD-L1 antibody durvalumab (EC50 = 0.3–1.8 nM). Structural insight into how these inhibitors interact with PD-L1 was gained by using NMR and X-ray cocrystal structure studies. These data support further preclinical evaluation of these compounds as antibody alternatives.

针对程序性细胞死亡-1 蛋白(PD-1)或其配体 PD-L1 的治疗性抗体已在各种癌症的治疗中显示出疗效。与抗体相比,小分子化合物具有更强的组织穿透性、更好的药理作用,因此可以提高抗肿瘤活性。我们合成了一系列非对称 C2 抑制剂,并评估了它们对 PD-1/PD-L1 相互作用的抑制作用。这些化合物能诱导 PD-L1 二聚化,并在均相时间分辨荧光(HTRF)测定中有效阻断 PD-L1/PD-1 相互作用,大多数抑制剂的 IC50 值在个位数 nM 或以下。在基于细胞培养的 PD-1 信号传导试验中,2 种抑制剂的 EC50 抑制活性为 21.8 nM,接近 PD-L1 抗体 durvalumab(EC50 = 0.3-1.8 nM)的水平。通过核磁共振和 X 射线共晶体结构研究,我们从结构上深入了解了这些抑制剂与 PD-L1 的相互作用。这些数据支持对这些化合物作为抗体替代品进行进一步的临床前评估。
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引用次数: 0
Lead Identification of Novel Naphthyridine Derivatives as Potent SOS1 Inhibitors 新型萘啶衍生物作为强效 SOS1 抑制剂的先导鉴定
IF 4.2 3区 医学 Q1 Chemistry Pub Date : 2024-06-03 DOI: 10.1021/acsmedchemlett.4c00156
Dongsheng Li, Qing Xie, Maozhi Yang, Yalei Cai, Kang Sun, Shujuan Jiang, Songda Yu, Lei Liu, Yixiang Zhang, Bing Yu*, Wangyang Tu* and Leping Li*, 

SOS1, a guanine nucleotide exchange factor (GEF), plays a critical role in catalyzing the conversion of KRAS from its GDP- to GTP-bound form, regardless of KRAS mutation status, and represents a promising new drug target to treat all KRAS-driven tumors. Herein, we employed a scaffold hopping strategy to design, synthesize, and optimize a series of novel binary ring derivatives as SOS1 inhibitors. Among them, compound 10f (HH0043) displayed potent activities in both biochemical and cellular assays and favorable pharmacokinetic profiles. Oral administration of HH0043 resulted in a significant tumor inhibitory effect in a subcutaneous KRASG12C-mutated NCI-H358 (human lung cancer cell line) xenograft mouse model, and the tumor inhibitory effect of HH0043 was superior to that of BI-3406 at the same dose (total growth inhibition, TGI: 76% vs 49%). On the basis of these results, HH0043, with a novel 1,7-naphthyridine scaffold that is distinct from currently reported SOS1 inhibitors, is nominated as the lead compound for this discovery project.

SOS1 是一种鸟嘌呤核苷酸交换因子 (GEF),在催化 KRAS 从 GDP 结合型向 GTP 结合型转化的过程中起着至关重要的作用,无论 KRAS 是否发生突变,它都是治疗所有 KRAS 驱动型肿瘤的一个很有前景的新药靶点。在此,我们采用支架跳跃策略设计、合成并优化了一系列新型二元环衍生物作为 SOS1 抑制剂。其中,化合物 10f(HH0043)在生化和细胞实验中都显示出了强效活性,并具有良好的药代动力学特征。在皮下注射 KRASG12C 突变的 NCI-H358(人肺癌细胞系)异种移植小鼠模型中,口服 HH0043 可产生显著的肿瘤抑制效果,其肿瘤抑制效果优于相同剂量的 BI-3406(总生长抑制率 TGI:76% 对 49%)。基于这些结果,HH0043 具有新颖的 1,7-萘啶支架,有别于目前报道的 SOS1 抑制剂,因此被提名为该发现项目的先导化合物。
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引用次数: 0
Novel Heteroaryl Compounds as CD73 Inhibitors for Treating Cancer 作为 CD73 抑制剂治疗癌症的新型杂芳基化合物
IF 4.2 3区 医学 Q1 Chemistry Pub Date : 2024-05-31 DOI: 10.1021/acsmedchemlett.4c00230
Ram W. Sabnis*, 

Provided herein are novel heteroaryl compounds as CD73 inhibitors, pharmaceutical compositions, use of such compounds in treating cancer, and processes for preparing such compounds.

本文提供了作为 CD73 抑制剂的新型杂芳基化合物、药物组合物、此类化合物在治疗癌症中的用途以及制备此类化合物的工艺。
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引用次数: 0
Novel Furopyridine and Furopyrimidine Compounds as PI4K Inhibitors for Treating Malaria and Viral Infection 作为 PI4K 抑制剂治疗疟疾和病毒感染的新型呋喃吡啶和呋喃嘧啶化合物
IF 4.2 3区 医学 Q1 Chemistry Pub Date : 2024-05-31 DOI: 10.1021/acsmedchemlett.4c00229
Ram W. Sabnis*, 

Provided herein are novel furopyridine and furopyrimidine compounds as PI4K inhibitors, pharmaceutical compositions, use of such compounds in treating malaria and viral infections, and processes for preparing such compounds.

本文提供了作为 PI4K 抑制剂的新型呋喃吡啶和呋喃嘧啶化合物、药物组合物、此类化合物在治疗疟疾和病毒感染中的用途以及制备此类化合物的工艺。
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引用次数: 0
Enzymatic Synthesis of Austroeupatol Esters with Enhanced Antiprotozoal Activity 酶法合成具有更强抗原虫活性的奥斯特鲁帕托酯
IF 4.2 3区 医学 Q1 Chemistry Pub Date : 2024-05-30 DOI: 10.1021/acsmedchemlett.4c00070
Orlando G. Elso, Augusto E. Bivona, Elena Aguilera, Guzman Alvarez, Valeria P. Sülsen and Guadalupe E. García Liñares*, 

Austroeupatol, the principal diterpene isolated from the invasive shrub Austroeupatorium inulifolium, holds promise for structural diversification and biological assessment of its derivatives due to its abundant availability and high yield isolation. We propose an efficient enzymatic synthesis of a series of austroeupatol esters derived from aliphatic and heterocyclic carboxylic acids. Systematic optimization of reaction parameters, including enzyme type and quantity, acylating agent amount, solvent, and temperature, was conducted. Thermomyces lanuginosus lipase in cyclohexane at 55 °C, yielded esters with favorable conversion rates. Through enzymatic catalysis, mono- and diacylated derivatives were obtained, with a diacylation–monoacylation ratio influenced by temperature and acylating agent amount. The antiprotozoal activity of austroeupatol and all synthesized derivatives was evaluated, observing that acylation improved it. The 19-valeroyl, 19-indolylpropyl, and 19-octyl derivatives were the most potent compounds against Trypanosoma cruzi and Leishmania infantum, highlighting this approach as a valuable method for synthesizing austroeupatol derivatives as potential antiparasitic agents.

Austroeupatol 是一种从入侵灌木 Austroeupatorium inulifolium 中分离出来的主要二萜类化合物,由于其来源丰富且分离率高,有望实现其衍生物的结构多样化和生物学评估。我们提出了一种从脂肪族和杂环族羧酸衍生出一系列奥斯特鲁巴特醇酯的高效酶法合成方法。我们对反应参数(包括酶的类型和数量、酰化剂用量、溶剂和温度)进行了系统优化。在 55 ℃ 的环己烷中,兰氏热酵母菌脂肪酶以良好的转化率生成酯。通过酶催化,得到了单酰化和二酰化衍生物,二酰化-单酰化比例受温度和酰化剂用量的影响。对奥斯特鲁帕醇和所有合成衍生物的抗原虫活性进行了评估,发现酰化作用提高了其抗原虫活性。19-缬氨酰基、19-吲哚基丙基和 19-辛基衍生物是对克鲁斯锥虫和婴儿利什曼原虫最有效的化合物,突出表明这种方法是合成奥斯特鲁帕醇衍生物作为潜在抗寄生虫药物的重要方法。
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ACS Medicinal Chemistry Letters
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