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In vitro and in vivo evaluation of anti-inflammatory activities of ethanol extract from Lom-Am-Ma-Pruek remedy for pain relief. 龙麻镇痛药乙醇提取物的体内外抗炎活性评价。
IF 2.1 Q3 CHEMISTRY, MEDICINAL Pub Date : 2024-12-15 eCollection Date: 2024-12-01 DOI: 10.4103/RPS.RPS_26_24
Arunporn Itharat, Pun Thongmee, Krit Piwngam, Janjira Inprasit, Sunita Makchuchit, Pranporn Kuropakornpong, Neal M Davies

Background and purpose: Lom-Am-Ma-Pruek (LAMP) remedy has been used in Thai traditional medicine to relieve pain associated with the inflammatory process. The anti-inflammatory activity and bioactivity of LAMP in an animal model have not been previously investigated. We evaluated the in-vitro and in-vivo anti-inflammatory activity of LAMP ethanol extract.

Experimental approach: The anti-inflammatory activity of LAMP and its plant ingredients were investigated on lipopolysaccharide-stimulated NO, PGE2, and TNF-α release from RAW264.7 cells. Furthermore, the stability of LAMP under biological and chemical accelerated conditions was evaluated using the Griess reaction assay and HPLC. Lastly, rat models with ethyl phenylpropionate (EPP)-induced ear edema and carrageenan-induced paw edema were utilized to assess anti-inflammatory activity.

Findings/results: LAMP possessed potent inhibitory effects on NO, PGE2, and TNF-α production with IC50 values of 24.90 ± 0.86, 4.77 ± 0.03, and 35.01 ± 2.61 µg/mL, respectively. In addition, LAMP extract demonstrated stable biological activity, anti-inflammatory effects, and phytochemical content stability under stress conditions. Additionally, 0.5%, 1%, and 2% w/v LAMP significantly inhibited EPP-induced rat ear edema over time equivalent to 5% w/v phenylbutazone. LAMP at 180, 375, and 750 mg/kg also considerably reduced carrageenan-induced rat paw edema 2 h after carrageenan administration compared to phenylbutazone at 250 mg/kg.

Conclusion and implications: LAMP has anti-inflammatory activity by inhibiting PGE2 formation. These findings are consistent with the efficacy and traditional use of the LAMP remedy in treating inflammatory diseases.

背景和目的:lomam - ma - pruek (LAMP)疗法在泰国传统医学中用于缓解炎症过程相关的疼痛。LAMP在动物模型中的抗炎活性和生物活性尚未被研究。我们评估了LAMP乙醇提取物的体外和体内抗炎活性。实验方法:研究LAMP及其植物成分对脂多糖刺激RAW264.7细胞释放NO、PGE2和TNF-α的抗炎活性。采用Griess反应法和高效液相色谱法对LAMP在生物和化学加速条件下的稳定性进行了评价。最后,采用苯基丙酸乙酯(EPP)诱导的大鼠耳水肿和卡拉胶诱导的大鼠足水肿模型来评估抗炎活性。结果:LAMP对NO、PGE2和TNF-α的产生有较强的抑制作用,IC50值分别为24.90±0.86、4.77±0.03和35.01±2.61µg/mL。此外,LAMP提取物在逆境条件下表现出稳定的生物活性、抗炎作用和植物化学成分的稳定性。此外,0.5%、1%和2% w/v的LAMP可显著抑制epp诱导的大鼠耳部水肿,其作用相当于5% w/v的苯丁酮。与苯基丁酮(250 mg/kg)相比,180、375和750 mg/kg的LAMP也显著减少了卡拉胶诱导的大鼠足部水肿。结论及意义:LAMP通过抑制PGE2的形成具有抗炎作用。这些发现与LAMP治疗炎症性疾病的疗效和传统用法一致。
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引用次数: 0
Synthesis, docking, pharmacokinetic prediction, and acetylcholinesterase inhibitory evaluation of N-(2-(piperidine-1-yl)ethyl)benzamide derivatives as potential anti-Alzheimer agents. N-(2-(哌啶-1-酰基)乙基)苯酰胺衍生物的合成、对接、药代动力学预测及乙酰胆碱酯酶抑制评价
IF 2.1 Q3 CHEMISTRY, MEDICINAL Pub Date : 2024-12-15 eCollection Date: 2024-12-01 DOI: 10.4103/RPS.RPS_257_23
Ahmad Mohammadi-Farani, Farzaneh Moradi, Amin Hosseini, Alireza Aliabadi

Background and purpose: Alzheimer's disease is the most common form of dementia and the sixth most common cause of death in the US according to the Alzheimer's Association. As regards, to date, no effective treatments are available because of the multifactorial nature of the disease, therefore, a large body of recent research has been allocated to the design and development of multi-target-directed ligands that can become effective drug candidates.

Experimental approach: A novel series of benzamide derivatives (5a-5l) containing piperidine core were synthesized in the current work. After identification of the chemical structures of the members of this series using 1H NMR, IR, and MS spectra, their anti-acetylcholinesterase activity was assessed by the Ellman᾽s test. Docking studies were also performed to investigate the binding mode and determine the interacting amino acids with the corresponding ligands. Finally, the pharmacokinetic (ADME parameters) of the most potent derivative (5d) was predicted and compared with donepezil.

Findings/results: Compound 5d possessing the fluorine atom substitution at position ortho was the most active compound in these series (IC50 = 13 ± 2.1 nM). This compound demonstrated superior activity than the reference drug donepezil (IC50 = 0.6 ± 0.05 µM). Molecular docking showed a significant hydrogen bonding of the carbonyl group of compounds 5d with tyrosine 121 into the active site of acetylcholinesterase. Fortunately, this compound showed better promising ADME properties than donepezil.

Conclusion and implication: The benzamide derivatives introduced in this paper could be proposed as potential anti-acetylcholinesterase.

背景和目的:根据阿尔茨海默病协会的数据,阿尔茨海默病是美国最常见的痴呆症,也是第六大常见死因。至于迄今为止,由于该疾病的多因素性质,尚无有效的治疗方法,因此,最近的大量研究已分配给设计和开发可成为有效候选药物的多靶点定向配体。实验方法:合成了一系列新的含哌啶核心的苯甲酰胺衍生物(5a-5l)。利用1H NMR、IR、MS等谱图对该系列化合物的化学结构进行鉴定后,利用Ellman操作系统测定其抗乙酰胆碱酯酶活性。对接研究也进行了研究的结合模式和确定相互作用的氨基酸与相应的配体。最后,预测最有效衍生物(5d)的药代动力学(ADME参数),并与多奈哌齐进行比较。结果:邻位氟原子取代的化合物5d活性最高(IC50 = 13±2.1 nM)。该化合物的活性优于对照药物多奈哌齐(IC50 = 0.6±0.05µM)。分子对接表明,化合物5d与酪氨酸121的羰基在乙酰胆碱酯酶活性位点上形成明显的氢键。幸运的是,该化合物表现出比多奈哌齐更好的ADME性能。结论与意义:本文所介绍的苯甲酰胺衍生物具有潜在的抗乙酰胆碱酯酶活性。
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引用次数: 0
Antiaging properties of chlorogenic acid through protein and gene biomarkers in human skin fibroblast cells as photoaging model. 绿原酸通过蛋白质和基因生物标记物在人皮肤成纤维细胞光老化模型中的抗衰老特性。
IF 2.1 Q3 CHEMISTRY, MEDICINAL Pub Date : 2024-12-15 eCollection Date: 2024-12-01 DOI: 10.4103/RPS.RPS_177_22
Ermi Girsang, Chrismis N Ginting, I Nyoman Ehrich Lister, Wahyu Widowati, Afif Yati, Hanna Sari Widya Kusuma, Rizal Azis

Background and purpose: Chlorogenic acid (CA) is a natural chemical that promises antiaging activity against photoaging skin damage. This research examined CA activities in mitigating skin photoaging.

Experimental approach: UV-exposed human skin fibroblast cells were subjected to CA at 6.25, 12.5, and 25 μg/mL. The protein levels of cell secretion, such as cyclooxygenase (COX)-2, nitric oxide (NO), and interleukin (IL)-6 were measured using ELISA and colorimetry methods. Meanwhile, the mRNA expressions of glutathione peroxidase (GPX)-1, tissue inhibitor metalloproteinase (TIMP)-1, matrix metalloproteinase (MMP)-1, caspase (CASP)-3, CASP-8, and fibroblast growth factor (FGF)-2 were quantified using the qRT-PCR method.

Findings/results: CA treatment reduced inflammatory and aging biomarkers. CA at 6.25 μg/mL lowered NO, COX-2, and IL-6 levels to 89.44 μmol/L, 8.10 ng/mL, and 62.75 pg/mL, respectively. CA at 25 μg/mL resulted in the most significant down-regulation of MMP-1, CASP-3, and CASP-8 genes' expression (3.27, 1.25, and 3.59, respectively). Furthermore, treatment with CA at 25 µg/mL demonstrated the most notable activity in up-regulating antioxidant markers, specifically GPX-1, and extracellular matrix (ECM) integrity markers, including TIMP-1 and FGF-2 genes' expression.

Conclusion and implications: CA imposes its anti-aging activity by decreasing inflammatory and aging biomarkers, and increasing cellular antioxidant and ECM integrity.

背景与目的:绿原酸(CA)是一种天然化学物质,具有抗光老化作用。本研究考察了CA在缓解皮肤光老化中的作用。实验方法:分别以6.25、12.5、25 μg/mL的浓度对暴露于紫外线下的人皮肤成纤维细胞进行CA处理。采用酶联免疫吸附法和比色法检测细胞分泌的环氧化酶(COX)-2、一氧化氮(NO)、白细胞介素(IL)-6等蛋白水平。同时,采用qRT-PCR方法定量测定谷胱甘肽过氧化物酶(GPX)-1、组织抑制剂金属蛋白酶(TIMP)-1、基质金属蛋白酶(MMP)-1、CASP -3、CASP-8、成纤维细胞生长因子(FGF)-2 mRNA表达量。发现/结果:CA治疗降低了炎症和衰老生物标志物。CA浓度为6.25 μmol/ mL时,NO、COX-2和IL-6水平分别降至89.44 μmol/L、8.10 ng/mL和62.75 pg/mL。25 μg/mL的CA对MMP-1、CASP-3和CASP-8基因的表达下调最为显著(分别为3.27、1.25和3.59)。此外,25µg/mL的CA处理显示出最显著的抗氧化标志物上调活性,特别是GPX-1和细胞外基质(ECM)完整性标志物,包括TIMP-1和FGF-2基因的表达。结论和意义:CA通过降低炎症和衰老生物标志物,增加细胞抗氧化性和ECM完整性来发挥其抗衰老活性。
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引用次数: 0
Enhancement effect of urea toward electroporation-mediated plasmid transfection efficiency in the HEK-293 cell line. 尿素对HEK-293细胞株电穿孔介导质粒转染效率的增强作用。
IF 2.1 Q3 CHEMISTRY, MEDICINAL Pub Date : 2024-12-15 eCollection Date: 2024-12-01 DOI: 10.4103/RPS.RPS_185_23
Mahshid Mowla, Gilar Gorji-Bahri, Hamid Reza Moghimi, Atieh Hashemi

Background and purpose: Intracellular delivery is crucial in biological and medical studies. Although many molecular tools have been created for cell-based gene therapies, it remains challenging to introduce external molecules into cells. As one of the most popular non-viral transfection methods, electroporation induces transient pores in the cell membrane by applying an external electric field. Unsatisfactory transfection efficiency and low cell viability are the major drawbacks of electroporation. To overcome these issues, the current study investigated the effect of urea on electroporation-mediated transfection efficiency.

Experimental approach: Three voltages of electroporation, including 100, 120, and 140 V, and 3 concentrations of urea buffer, including 0.25%, 0.5%, and 1% W/V, were considered as variables in this study. The HEK-293 cell line was used for transfection, and green fluorescent protein (GFP) expression was evaluated using flow cytometry and fluorescence microscopy.

Findings/results: The results showed that the combination of electroporation and urea increased electroporation efficacy, but the effect depended on voltage and urea concentration. When different concentrations of urea were added to HEK-293 cells at a voltage of 100 V, the number of cells transfected by pEGFP-N1 increased (from 12.3 ± 0.2% in untreated cells to 17.35 ± 0.55%, 23.3 ± 0.3%, and 14 ± 0.1% at urea concentrations of 0.25%, 0.5%, and 1% W/V, respectively). The electroporation buffer containing 0.5% W/V urea showed the highest EGFP expression (23.3 ± 0.3%) and high cell viability (over 90%).

Conclusion and implications: This research offers a new perspective for improving gene transfection efficiency once electroporation is utilized.

背景和目的:细胞内递送在生物学和医学研究中至关重要。尽管许多分子工具已经被用于基于细胞的基因治疗,但将外部分子引入细胞仍然具有挑战性。电穿孔是目前最流行的一种非病毒转染方法,它通过施加外加电场在细胞膜上诱导瞬时孔隙。转染效率不理想和细胞活力低是电穿孔的主要缺点。为了克服这些问题,本研究研究了尿素对电穿孔介导的转染效率的影响。实验方法:以100、120、140 V三种电穿孔电压和0.25%、0.5%、1% W/V三种尿素缓冲液浓度作为实验变量。转染HEK-293细胞系,采用流式细胞术和荧光显微镜检测绿色荧光蛋白(GFP)的表达。结果:结果表明,电穿孔与尿素联用可提高电穿孔效果,但效果与电压和尿素浓度有关。当不同浓度的尿素在100 V电压下加入HEK-293细胞时,pEGFP-N1转染细胞的数量增加(从未处理细胞的12.3±0.2%增加到尿素浓度为0.25%、0.5%和1% W/V时的17.35±0.55%、23.3±0.3%和14±0.1%)。含0.5% W/V尿素的电穿孔缓冲液EGFP表达量最高(23.3±0.3%),细胞存活率最高(90%以上)。结论与意义:本研究为利用电穿孔技术提高基因转染效率提供了新的视角。
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引用次数: 0
Multiple ligands simultaneous molecular docking and dynamics approach to study the synergetic inhibitory of curcumin analogs on ErbB4 tyrosine phosphorylation. 多配体同时分子对接和动力学方法研究姜黄素类似物协同抑制ErbB4酪氨酸磷酸化。
IF 2.1 Q3 CHEMISTRY, MEDICINAL Pub Date : 2024-12-15 eCollection Date: 2024-12-01 DOI: 10.4103/RPS.RPS_191_23
La Ode Aman, Netty Ino Ischak, Teti Sutriyati Tuloli, Arfan Arfan, Aiyi Asnawi

Background and purpose: Lapatinib (FMM) and 5-fluorouracil (5-FU) are anticancer drugs employed in a combination approach. FMM inhibits tyrosine phosphorylation of ErbB4 while 5-FU inhibits cell proliferation. This research aimed to investigate the potential of two compounds, namely (1E,4E)-1,5-bis (4-hydroxyphenyl) penta-1,4-dien-3-one (AC01) and (1E,4E)-1,5-bis (3,4-dihydroxy phenyl) penta-1,4-dien-3-one (AC02), both as individual inhibitors and combination partners with FMM, targeting ErbB4 inhibition. AC01 and AC02 were combined with FMM, which targets ErbB4. The combination of 5-FU with FMM served as a reference in this study.

Experimental approach: The research utilized computational simulation methods such as single and multiple ligands simultaneously docking and dynamics. Data analysis was performed using AutoDockTools and gmx_MMPBSA.

Findings/results: Single docking results indicated that 5-FU exhibited the lowest binding affinity, while FMM demonstrated the highest. Simultaneous docking of AC01 and AC02 paired with FMM revealed their binding positions overlapping with the FMM-5-FU workspace. The FMM-AC01 and FMM-AC02 complexes exhibited slightly weaker binding affinities compared to FMM-5-FU. In combination with FMM, AC01 and AC02 occupied the ErbB4 activation loop, whereas 5-FU was outside the activation loop. Furthermore, in their interaction with ErbB4, AC02 exhibited slightly stronger binding than AC01, as confirmed by the average binding free energy calculations from molecular dynamics simulations.

Conclusion and implications: In conclusion, computational simulations indicated that both AC01 and AC02 have the potential to act as anticancer candidates, demonstrating ErbB4 inhibitory potential both as individual agents and in synergy with FMM.

背景与目的:拉帕替尼(FMM)和5-氟尿嘧啶(5-FU)是联合应用的抗癌药物。FMM抑制ErbB4酪氨酸磷酸化,而5-FU抑制细胞增殖。本研究旨在探讨(1E,4E)-1,5-双(4-羟基苯基)- 1,4-二烯-3-one (AC01)和(1E,4E)-1,5-双(3,4-二羟基苯基)- 1,4-二烯-3-one (AC02)这两种化合物作为FMM的单独抑制剂和联合抑制剂的潜力,以抑制ErbB4。AC01和AC02与FMM联合靶向ErbB4。本研究以5-FU联合FMM作为参考。实验方法:采用单配体与多配体同时对接、动力学等计算模拟方法。使用AutoDockTools和gmx_MMPBSA进行数据分析。发现/结果:单对接结果显示5-FU的结合亲和力最低,FMM的结合亲和力最高。AC01和AC02与FMM同时对接,发现它们的结合位置与FMM-5- fu工作空间重叠。与FMM-5-FU相比,FMM-AC01和FMM-AC02配合物的结合亲和力稍弱。与FMM联合,AC01和AC02占据ErbB4激活环,而5-FU在激活环外。此外,在与ErbB4的相互作用中,AC02表现出比AC01稍强的结合,这一点得到了分子动力学模拟计算的平均结合自由能的证实。结论和意义:总之,计算模拟表明AC01和AC02都有可能作为抗癌候选药物,无论是作为单独的药物还是与FMM协同作用,都显示出抑制ErbB4的潜力。
{"title":"Multiple ligands simultaneous molecular docking and dynamics approach to study the synergetic inhibitory of curcumin analogs on ErbB4 tyrosine phosphorylation.","authors":"La Ode Aman, Netty Ino Ischak, Teti Sutriyati Tuloli, Arfan Arfan, Aiyi Asnawi","doi":"10.4103/RPS.RPS_191_23","DOIUrl":"10.4103/RPS.RPS_191_23","url":null,"abstract":"<p><strong>Background and purpose: </strong>Lapatinib (FMM) and 5-fluorouracil (5-FU) are anticancer drugs employed in a combination approach. FMM inhibits tyrosine phosphorylation of ErbB4 while 5-FU inhibits cell proliferation. This research aimed to investigate the potential of two compounds, namely (1E,4E)-1,5-bis (4-hydroxyphenyl) penta-1,4-dien-3-one (AC01) and (1E,4E)-1,5-bis (3,4-dihydroxy phenyl) penta-1,4-dien-3-one (AC02), both as individual inhibitors and combination partners with FMM, targeting ErbB4 inhibition. AC01 and AC02 were combined with FMM, which targets ErbB4. The combination of 5-FU with FMM served as a reference in this study.</p><p><strong>Experimental approach: </strong>The research utilized computational simulation methods such as single and multiple ligands simultaneously docking and dynamics. Data analysis was performed using AutoDockTools and gmx_MMPBSA.</p><p><strong>Findings/results: </strong>Single docking results indicated that 5-FU exhibited the lowest binding affinity, while FMM demonstrated the highest. Simultaneous docking of AC01 and AC02 paired with FMM revealed their binding positions overlapping with the FMM-5-FU workspace. The FMM-AC01 and FMM-AC02 complexes exhibited slightly weaker binding affinities compared to FMM-5-FU. In combination with FMM, AC01 and AC02 occupied the ErbB4 activation loop, whereas 5-FU was outside the activation loop. Furthermore, in their interaction with ErbB4, AC02 exhibited slightly stronger binding than AC01, as confirmed by the average binding free energy calculations from molecular dynamics simulations.</p><p><strong>Conclusion and implications: </strong>In conclusion, computational simulations indicated that both AC01 and AC02 have the potential to act as anticancer candidates, demonstrating ErbB4 inhibitory potential both as individual agents and in synergy with FMM.</p>","PeriodicalId":21075,"journal":{"name":"Research in Pharmaceutical Sciences","volume":"19 6","pages":"754-765"},"PeriodicalIF":2.1,"publicationDate":"2024-12-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11792710/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143256628","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Phytochemicals from Pyrrosia longifolia (Burm. f.) C.V. Morton with antibacterial activity. 长叶红豆的植物化学成分。f。)C.V.莫顿具有抗菌活性。
IF 2.1 Q3 CHEMISTRY, MEDICINAL Pub Date : 2024-12-15 eCollection Date: 2024-12-01 DOI: 10.4103/RPS.RPS_151_23
Hilwan Yuda Teruna, Rohimatul Khodijah, Neni Frimayanti, Rudi Hendra

Background and purpose: Pyrrosia longifolia is one of the medicinal plants in Indonesia. However, it has received little attention regarding pharmacological properties and phytochemicals. This study aimed to isolate bioactive compounds and evaluate their antibacterial activities.

Experimental approach: The secondary metabolites were isolated using a bioassay-guided approach. The aerial part was macerated in methanol and the crude methanol was partitioned with organic solvents to obtain n-hexane, dichloromethane, ethyl acetate, and water extracts. The ethyl acetate extract was purified using chromatography procedures, yielding six chemicals, and their structures were determined using spectroscopy. The antibacterial activity of the compounds was evaluated.

Findings/results: Six secondary phytochemical metabolites were identified including naringin (1), catechin (2), quercetin (3), rutin (4), kaempferol (5), and mangiferin (6). The absolute configurations of compounds 1 and 2 were ascertained using electronic circular dichroism as 2S for naringin and 2R, 3S for catechin. The compounds exhibited antibacterial activity against several pathogenic bacteria, with MIC and MBC values ranging from 7.8 to 250 μg/mL. Computational investigations of these compounds revealed a substantial affinity for bacterial receptors' active and allosteric regions. Furthermore, rutin exhibited the capacity to reduce the activity of β-ketoacyl-acyl carrier protein synthase III, enhancing its antibacterial effectiveness.

Conclusion and implications: The in-vitro assessment revealed that the six identified compounds possess a wide range of antibacterial activity, which was corroborated by in-silico analyses. However, further investigation is required to back up the conclusion of this study.

背景与目的:长叶火蔷薇是印度尼西亚的药用植物之一。然而,它的药理性质和植物化学成分很少受到关注。本研究旨在分离生物活性化合物并评价其抗菌活性。实验方法:采用生物测定法分离次生代谢物。空气部分在甲醇中浸泡,粗甲醇与有机溶剂分离得到正己烷、二氯甲烷、乙酸乙酯和水提取物。用色谱法纯化乙酸乙酯提取物,得到6种化学物质,并用光谱法确定其结构。对化合物的抑菌活性进行了评价。结果:鉴定出柚皮素(1)、儿茶素(2)、槲皮素(3)、芦丁(4)、山奈酚(5)、芒果苷(6)6种次生植物化学代谢产物。利用电子圆二色法确定了化合物1和2的绝对构型,柚皮素为2S,儿茶素为2R, 3S。化合物对多种病原菌均有抑菌活性,MIC和MBC值在7.8 ~ 250 μg/mL之间。这些化合物的计算研究揭示了对细菌受体的活性和变构区域的实质性亲和力。芦丁还能降低β-酮酰基-酰基载体蛋白合成酶III的活性,增强其抗菌作用。结论和意义:体外实验结果表明,6个化合物具有广泛的抗菌活性,这一结果得到了硅晶分析的证实。然而,需要进一步的调查来支持本研究的结论。
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引用次数: 0
Exploring the inhibitory potential of xanthohumol on MEK1/2: a molecular docking and dynamics simulation investigation. 探索黄腐酚对MEK1/2的抑制潜力:分子对接和动力学模拟研究。
IF 2.1 Q3 CHEMISTRY, MEDICINAL Pub Date : 2024-12-15 eCollection Date: 2024-12-01 DOI: 10.4103/RPS.RPS_38_24
Zohreh Gholizadeh Siahmazgi, Shiva Irani, Ali Ghiaseddin, Fereshteh Soutodeh, Zahra Gohari, Jaber Afifeh, Amirreza Pashapouryeganeh, Hilda Samimi, Mahmood Naderi, Parviz Fallah, Vahid Haghpanah

Background and purpose: Xanthohumol (Xn), a small molecule found in Humulus lupulus, has shown promise as an anti-cancer compound. This in silico study was performed to understand the mechanism of action of Xn as a natural compound on MEK1/2 by simulation.

Experimental approach: After ligand and protein preparation, the best binding energy was determined using Autodock 4.2. Additionally, molecular dynamics simulations of the MEK1/2-Xn and BRaf-MEK1/2-Xn complexes were conducted using GROMACS 2022.1 software and compared to the complexes of MEK1/2-trametinib (Tra) and BRaf-MEK1/2-Tra.

Findings/results: The docking results revealed that the best binding energies for MEK1-Xn (-10.70 Kcal/mol), MEK2-Xn (-9.41 Kcal/mol), BRaf-MEK1-Xn (-10.91 Kcal/mol), and BRaf-MEK2-Xn (-8.54 Kcal/mol) were very close to those of the Tra complexes with their targets, MEK1 and MEK2. Furthermore, Xn was found to interact with serine 222 at the active site of these two kinases. The results of the molecular dynamics simulations also indicated that Xn induced changes in the secondary structure of the studied proteins. The root mean square of proteins and the mean radius of gyration showed significant fluctuations.

Conclusion and implications: The findings of the study suggested that Xn, as a novel bioactive compound, potentially inhibits the MEK1/2 function in cancer cells.

背景与目的:黄腐酚(Xanthohumol, Xn)是一种在葎草中发现的小分子化合物,具有抗癌作用。本研究通过模拟来了解Xn作为天然化合物在MEK1/2上的作用机制。实验方法:配体和蛋白制备完成后,利用Autodock 4.2确定最佳结合能。此外,利用GROMACS 2022.1软件对MEK1/2-Xn和BRaf-MEK1/2-Xn配合物进行分子动力学模拟,并与MEK1/2-trametinib (Tra)和BRaf-MEK1/2-Tra配合物进行比较。结果:对接结果表明,MEK1- xn (-10.70 Kcal/mol)、MEK2- xn (-9.41 Kcal/mol)、BRaf-MEK1-Xn (-10.91 Kcal/mol)和BRaf-MEK2-Xn (-8.54 Kcal/mol)的最佳结合能与靶蛋白MEK1和MEK2的最佳结合能非常接近。此外,Xn在这两种激酶的活性位点与丝氨酸222相互作用。分子动力学模拟结果还表明,Xn诱导了所研究蛋白二级结构的变化。蛋白质的均方根和平均旋转半径出现了显著的波动。结论与意义:本研究结果提示Xn作为一种新型生物活性化合物,可能抑制癌细胞中MEK1/2的功能。
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引用次数: 0
Ultra-small phospholipid nanoparticles in the treatment of combined hyperlipidemia: a randomized placebo-controlled clinical trial. 超小磷脂纳米颗粒治疗合并高脂血症:一项随机安慰剂对照临床试验
IF 2.1 Q3 CHEMISTRY, MEDICINAL Pub Date : 2024-12-15 eCollection Date: 2024-12-01 DOI: 10.4103/RPS.RPS_274_23
Alexander Archakov, Valery Kukharchuk, Andrey Lisitsa, Elena Ponomarenko, Yulia Romashova, Tatiana Pleshakova, Elena Yarovaya, Vladimir Kutsenko, Maria Guseva, Valery Beregovykh, Olga Ipatova, Marina Zubareva, Elena Tikhonova, Sergei Ivanov, Farid Bedretdinov, Sergey Markin

Background and purpose: Combined hyperlipidemia is associated with an increased risk of cardiovascular events. This clinical trial investigated phospholipovit (essential phospholipids, Institute of Biomedical Chemistry, Moscow, Russia), an ultra-small phospholipid nanoparticle (micelles), targeted to phospholipids of HDL in lowering non-HDL-cholesterol (non-HDL-C) and triglycerides (TG) levels in patients with combined hyperlipidemia and moderate cardiovascular risk.

Experimental approach: A randomized, double-blinded, placebo-controlled phase II trial was conducted on 100 patients. Phospholipovit or placebo was randomly administered orally (500 mg) 2 times a day for 12 weeks. The primary endpoint was the percent change of non-HDL-C from baseline to 12 weeks of exposure.

Findings/results: Treatment with phospholipovit resulted in a mean non-HDL-C reduction of 13.2% versus 4.3% compared with placebo. The absolute decrease in non-HDL-C was -23.2 (-48.7 - 7.0) mg/dL versus -7.3 (-17.0 - 12.0) mg/dL, significantly. The therapeutic target of non-HDL-C less than 130 mg/dL (3.4 mmol) was achieved in 15 of 39 patients (38.5%) in the phospholipovit group versus 2 of 41 patients (4.9%) in the placebo group OR 11.8 (2.4 - 116). Significant reduction in TG, apolipoprotein B, total cholesterol, and very low-density lipoprotein cholesterol levels was also observed. There were no changes in the liver and kidney functions, vital signs, or electrocardiography. There were no serious adverse events.

Conclusion and implications: Phospholipovit significantly reduced non-HDL-C, TG, and atherogenic lipoproteins in patients with combined hyperlipidemia and moderate cardiovascular risk. It can be used as an add-on therapy to statins.

背景和目的:合并高脂血症与心血管事件风险增加相关。该临床试验研究了磷脂(必需磷脂,莫斯科生物医学化学研究所,俄罗斯),一种超小磷脂纳米颗粒(胶束),针对高密度脂蛋白的磷脂,降低合并高脂血症和中度心血管风险患者的非高密度脂蛋白胆固醇(non-HDL-C)和甘油三酯(TG)水平。实验方法:对100例患者进行了随机、双盲、安慰剂对照的II期试验。磷脂肽或安慰剂随机口服(500毫克),每天2次,持续12周。主要终点是非hdl - c从基线到暴露12周的百分比变化。发现/结果:与安慰剂相比,使用磷脂肽治疗导致非hdl - c平均降低13.2%,而不是4.3%。非hdl - c的绝对下降为-23.2 (-48.7 - 7.0)mg/dL,而非-7.3 (-17.0 - 12.0)mg/dL,显著。39例患者中有15例(38.5%)达到非hdl - c低于130 mg/dL (3.4 mmol)的治疗目标,而安慰剂组41例患者中有2例(4.9%)达到OR 11.8(2.4 - 116)。还观察到TG、载脂蛋白B、总胆固醇和极低密度脂蛋白胆固醇水平的显著降低。肝肾功能、生命体征或心电图均无变化。无严重不良事件发生。结论和意义:磷脂可显著降低合并高脂血症和中度心血管风险患者的非hdl - c、TG和致动脉粥样硬化脂蛋白。它可以作为他汀类药物的附加治疗。
{"title":"Ultra-small phospholipid nanoparticles in the treatment of combined hyperlipidemia: a randomized placebo-controlled clinical trial.","authors":"Alexander Archakov, Valery Kukharchuk, Andrey Lisitsa, Elena Ponomarenko, Yulia Romashova, Tatiana Pleshakova, Elena Yarovaya, Vladimir Kutsenko, Maria Guseva, Valery Beregovykh, Olga Ipatova, Marina Zubareva, Elena Tikhonova, Sergei Ivanov, Farid Bedretdinov, Sergey Markin","doi":"10.4103/RPS.RPS_274_23","DOIUrl":"10.4103/RPS.RPS_274_23","url":null,"abstract":"<p><strong>Background and purpose: </strong>Combined hyperlipidemia is associated with an increased risk of cardiovascular events. This clinical trial investigated phospholipovit (essential phospholipids, Institute of Biomedical Chemistry, Moscow, Russia), an ultra-small phospholipid nanoparticle (micelles), targeted to phospholipids of HDL in lowering non-HDL-cholesterol (non-HDL-C) and triglycerides (TG) levels in patients with combined hyperlipidemia and moderate cardiovascular risk.</p><p><strong>Experimental approach: </strong>A randomized, double-blinded, placebo-controlled phase II trial was conducted on 100 patients. Phospholipovit or placebo was randomly administered orally (500 mg) 2 times a day for 12 weeks. The primary endpoint was the percent change of non-HDL-C from baseline to 12 weeks of exposure.</p><p><strong>Findings/results: </strong>Treatment with phospholipovit resulted in a mean non-HDL-C reduction of 13.2% versus 4.3% compared with placebo. The absolute decrease in non-HDL-C was -23.2 (-48.7 - 7.0) mg/dL versus -7.3 (-17.0 - 12.0) mg/dL, significantly. The therapeutic target of non-HDL-C less than 130 mg/dL (3.4 mmol) was achieved in 15 of 39 patients (38.5%) in the phospholipovit group versus 2 of 41 patients (4.9%) in the placebo group OR 11.8 (2.4 - 116). Significant reduction in TG, apolipoprotein B, total cholesterol, and very low-density lipoprotein cholesterol levels was also observed. There were no changes in the liver and kidney functions, vital signs, or electrocardiography. There were no serious adverse events.</p><p><strong>Conclusion and implications: </strong>Phospholipovit significantly reduced non-HDL-C, TG, and atherogenic lipoproteins in patients with combined hyperlipidemia and moderate cardiovascular risk. It can be used as an add-on therapy to statins.</p>","PeriodicalId":21075,"journal":{"name":"Research in Pharmaceutical Sciences","volume":"19 6","pages":"656-668"},"PeriodicalIF":2.1,"publicationDate":"2024-12-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11792717/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143256564","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Immunoinformatic approach to the design of a novel multi-epitope vaccine against Leishmania major fused to human IgG-Fc. 用免疫信息学方法设计融合人IgG-Fc的新型利什曼原虫多表位疫苗。
IF 2.1 Q3 CHEMISTRY, MEDICINAL Pub Date : 2024-12-15 eCollection Date: 2024-12-01 DOI: 10.4103/RPS.RPS_145_24
Mahmood Fadaie, Zabihollah Shahmoradi, Hossein Khanahmad

Background and purpose: Cutaneous leishmaniasis poses significant health and socioeconomic challenges, making vaccine development a top priority, especially in endemic regions. Cysteine proteases, KMP-11, and HASPB proteins are promising candidates for leishmaniasis vaccine development owing to their immunogenic properties and capacity to provoke robust immune responses, as evidenced by different investigations. This study aimed to design a recombinant chimeric protein (MEV-Fc) vaccine using multi-epitopes from these Leishmania major proteins.

Experimental approach: The antigens were subjected to immunoinformatic prediction and screening of HTL, CTL, and B-cell epitopes. The multi-epitope protein was designed with significantly high-scoring epitopes and suitable linkers. Natural adjuvants were then added to enhance immunogenicity. Vaccine potency was innovatively improved by covalently fusing human IgG1 Fc with multi-epitope protein. To investigate how the MEV-Fc vaccine interacts with Toll-like receptors, molecular docking, multi-scale normal mode analysis simulation, and computational immune simulation were employed to study humoral and cellular immune responses.

Findings/results: The results demonstrated the vaccine's antigenicity, stability, and nontoxicity. The structural validation confirmed the accuracy of the 3D models, indicating robust interactions with TLR2 and TLR4, with binding free energies of -1269.9 and -1128.7 (kcal/mol), respectively. Immune simulation results showed significant increases in IgM and IgG antibody levels following three vaccinations, along with enhanced activation of B cells, helper T cells, and cytotoxic T lymphocytes.

Conclusion and implications: These findings provide novel insights for developing effective candidates for cutaneous leishmaniasis vaccines. However, laboratory experiments are necessary to evaluate its protective effects.

背景和目的:皮肤利什曼病构成重大的健康和社会经济挑战,使疫苗开发成为重中之重,特别是在流行地区。不同的研究证明,半胱氨酸蛋白酶、KMP-11和HASPB蛋白由于其免疫原性和激发强大免疫反应的能力,是利什曼病疫苗开发的有希望的候选蛋白。本研究旨在利用这些利什曼原虫主要蛋白的多表位设计重组嵌合蛋白(MEV-Fc)疫苗。实验方法:对抗原进行免疫信息学预测和HTL、CTL和b细胞表位的筛选。设计的多表位蛋白具有显著的高分表位和合适的连接体。然后加入天然佐剂以增强免疫原性。通过将人IgG1 Fc与多表位蛋白共价融合,创新性地提高了疫苗效力。为了研究MEV-Fc疫苗如何与toll样受体相互作用,采用分子对接、多尺度正常模式分析模拟和计算免疫模拟等方法研究了MEV-Fc疫苗的体液和细胞免疫反应。发现/结果:结果证明该疫苗具有抗原性、稳定性和无毒性。结构验证证实了三维模型的准确性,表明与TLR2和TLR4具有较强的相互作用,结合自由能分别为-1269.9和-1128.7 (kcal/mol)。免疫模拟结果显示,接种三次疫苗后,IgM和IgG抗体水平显著增加,同时B细胞、辅助T细胞和细胞毒性T淋巴细胞的活化增强。结论和意义:这些发现为开发有效的皮肤利什曼病候选疫苗提供了新的见解。然而,需要实验室实验来评价其保护作用。
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引用次数: 0
MicroRNA-219 in the central nervous system: a potential theranostic approach. 中枢神经系统中的MicroRNA-219:一种潜在的治疗方法。
IF 2.1 Q3 CHEMISTRY, MEDICINAL Pub Date : 2024-12-15 eCollection Date: 2024-12-01 DOI: 10.4103/RPS.RPS_163_23
Nahal Shamaeizadeh, Mina Mirian

Despite the recent therapeutic advances in neurological disorders, curative therapy remains a serious challenge in many cases. Even though recent years have witnessed the development of gene therapy from among the different therapeutic approaches affecting pathophysiological mechanisms, intriguing aspects exist regarding the effectiveness, safety, and mechanism of action of gene therapies. Micro ribonucleic acid (microRNA-miRNA), as a fundamental gene regulator, regulates messenger ribonucleic acid (mRNA) by directly binding through the 3'-untranslated region (3'-UTR). MicroRNA-219 is a specific brain-enriched miRNA associated with neurodevelopmental disorders that play crucial roles in the differentiation of oligodendrocyte progenitorcells, promotion of oligodendrocyte maturation, remyelination, and cognitive functions to the extent that it can be considered a potential therapeutic option for demyelination in multiple sclerosis and spinal cord injury and reverse chronic inflammation pains. Additionally, miR-219 regulates the circadian clock, influencing the duration of the circadian clock period. This regulation can impact mood stability and is associated with phase fluctuations in bipolar patients. Furthermore, miR-219 also plays a role in modulating tau toxicity, which is relevant to the pathophysiology of Alzheimer's disease and schizophrenia. Finally, it reportedly has protective effects against seizures and Parkinson's disease, as well as neoplasms, by inhibiting proliferation, suppressing invasion, and inducing cell death in tumor cells. Exploring the miR-219 molecular pathways and their therapeutic effects on central nervous system disorders and the mechanisms involved, the present review study aims to illustrate how this information may change the future of gene therapy.

尽管最近神经系统疾病的治疗取得了进展,但在许多情况下,治愈性治疗仍然是一个严重的挑战。尽管近年来在影响病理生理机制的不同治疗方法中,基因治疗得到了发展,但基因治疗的有效性、安全性和作用机制仍存在一些有趣的问题。微核糖核酸(Micro ribonucleic acid, microRNA-miRNA)作为一种基本的基因调节剂,通过3'- untranslation区(3'-UTR)直接结合来调控信使核糖核酸(mRNA)。MicroRNA-219是一种与神经发育障碍相关的特异性脑富集miRNA,在少突胶质细胞前细胞的分化、促进少突胶质细胞成熟、髓鞘再生和认知功能中起着至关重要的作用,因此它可以被认为是多发性硬化症和脊髓损伤脱髓鞘和逆转慢性炎症疼痛的潜在治疗选择。此外,miR-219调节生物钟,影响生物钟周期的持续时间。这种调节可以影响情绪稳定性,并与双相情感障碍患者的相位波动有关。此外,miR-219还在调节tau毒性中发挥作用,这与阿尔茨海默病和精神分裂症的病理生理有关。最后,据报道,它通过抑制肿瘤细胞的增殖、抑制侵袭和诱导细胞死亡,对癫痫发作和帕金森病以及肿瘤有保护作用。通过探索miR-219分子通路及其对中枢神经系统疾病的治疗作用及其机制,本综述旨在说明这些信息如何改变基因治疗的未来。
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引用次数: 0
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Research in Pharmaceutical Sciences
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