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Inherited Ventricular Arrhythmia in Zebrafish: Genetic Models and Phenotyping Tools. 斑马鱼的遗传性室性心律失常:遗传模型和表型工具。
2区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.1007/112_2021_65
Ewa Sieliwonczyk, Vladimir V Matchkov, Bert Vandendriessche, Maaike Alaerts, Jeroen Bakkers, Bart Loeys, Dorien Schepers

In the last years, the field of inheritable ventricular arrhythmia disease modelling has changed significantly with a push towards the use of novel cellular cardiomyocyte based models. However, there is a growing need for new in vivo models to study the disease pathology at the tissue and organ level. Zebrafish provide an excellent opportunity for in vivo modelling of inheritable ventricular arrhythmia syndromes due to the remarkable similarity between their cardiac electrophysiology and that of humans. Additionally, many state-of-the-art methods in gene editing and electrophysiological phenotyping are available for zebrafish research. In this review, we give a comprehensive overview of the published zebrafish genetic models for primary electrical disorders and arrhythmogenic cardiomyopathy. We summarise and discuss the strengths and weaknesses of the different technical approaches for the generation of genetically modified zebrafish disease models, as well as the electrophysiological approaches in zebrafish phenotyping. By providing this detailed overview, we aim to draw attention to the potential of the zebrafish model for studying arrhythmia syndromes at the organ level and as a platform for personalised medicine and drug testing.

在过去的几年里,遗传性室性心律失常疾病建模领域发生了重大变化,推动了新型细胞心肌细胞模型的使用。然而,越来越需要新的体内模型来研究组织和器官水平的疾病病理。斑马鱼为遗传性室性心律失常综合征的体内建模提供了极好的机会,因为它们的心脏电生理与人类的非常相似。此外,许多最先进的基因编辑和电生理表型方法可用于斑马鱼研究。在这篇综述中,我们对已发表的斑马鱼原发性电障碍和心律失常性心肌病的遗传模型进行了全面的综述。我们总结和讨论了不同技术方法的优点和缺点,以产生转基因斑马鱼疾病模型,以及斑马鱼表型中的电生理方法。通过提供详细的概述,我们旨在引起人们对斑马鱼模型在器官水平上研究心律失常综合征以及作为个性化医学和药物测试平台的潜力的关注。
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引用次数: 1
Autocrine, Paracrine, and Endocrine Signals That Can Alter Alveolar Macrophages Function. 自分泌、旁分泌和内分泌信号可改变肺泡巨噬细胞功能。
2区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.1007/112_2022_76
Yue Yang, Yun Wang

Alveolar macrophages (AMs) are extremely versatile cells with complex functions involved in health or diseases such as pneumonia, asthma, and pulmonary alveolar proteinosis. In recent years, it has been widely identified that the different functions and states of macrophages are the results from the complex interplay between microenvironmental signals and macrophage lineage. Diverse and complicated signals to which AMs respond are mentioned when they are described individually or in a particular state of AMs. In this review, the microenvironmental signals are divided into autocrine, paracrine, and endocrine signals based on their secreting characteristics. This new perspective on classification provides a more comprehensive and systematic introduction to the complex signals around AMs and is helpful for understanding the roles of AMs affected by physiological environment. The existing possible treatments of AMs are also mentioned in it. The thorough understanding of AMs signals modulation may be contributed to the development of more effective therapies for AMs-related lung diseases.

肺泡巨噬细胞(Alveolar macrophages, AMs)是一种功能非常广泛的细胞,具有复杂的功能,涉及健康或疾病,如肺炎、哮喘和肺泡蛋白沉积症。近年来,人们普遍认为巨噬细胞的不同功能和状态是微环境信号与巨噬细胞谱系复杂相互作用的结果。在单独描述或在am的特定状态下描述am响应的各种复杂信号时,会提到它们。本文根据微环境信号的分泌特点,将其分为自分泌信号、旁分泌信号和内分泌信号。这一新的分类视角为更全面、系统地介绍am周围的复杂信号,有助于理解am受生理环境影响的作用。并对AMs的现有可能的治疗方法进行了介绍。深入了解AMs信号调节可能有助于开发更有效的AMs相关肺部疾病的治疗方法。
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引用次数: 0
Reviews of Physiology, Biochemistry and Pharmacology 生理学、生物化学和药理学综述
2区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.1007/978-3-031-25628-8
C. Chesterton
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引用次数: 0
Targeting Cancer Lysosomes with Good Old Cationic Amphiphilic Drugs. 用阳离子两亲性药物靶向癌症溶酶体。
2区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.1007/112_2020_56
Anne-Marie Ellegaard, Peter Bach, Marja Jäättelä

Being originally discovered as cellular recycling bins, lysosomes are today recognized as versatile signaling organelles that control a wide range of cellular functions that are essential not only for the well-being of normal cells but also for malignant transformation and cancer progression. In addition to their core functions in waste disposal and recycling of macromolecules and energy, lysosomes serve as an indispensable support system for malignant phenotype by promoting cell growth, cytoprotective autophagy, drug resistance, pH homeostasis, invasion, metastasis, and genomic integrity. On the other hand, malignant transformation reduces the stability of lysosomal membranes rendering cancer cells sensitive to lysosome-dependent cell death. Notably, many clinically approved cationic amphiphilic drugs widely used for the treatment of other diseases accumulate in lysosomes, interfere with their cancer-promoting and cancer-supporting functions and destabilize their membranes thereby opening intriguing possibilities for cancer therapy. Here, we review the emerging evidence that supports the supplementation of current cancer therapies with lysosome-targeting cationic amphiphilic drugs.

溶酶体最初是作为细胞的回收箱被发现的,如今被认为是一种多功能的信号细胞器,它控制着广泛的细胞功能,不仅对正常细胞的健康至关重要,而且对恶性转化和癌症的进展也至关重要。溶酶体除了具有废物处理、大分子和能量回收等核心功能外,还通过促进细胞生长、细胞保护性自噬、耐药、pH稳态、侵袭、转移和基因组完整性等功能,成为恶性表型不可缺少的支持系统。另一方面,恶性转化降低溶酶体膜的稳定性,使癌细胞对溶酶体依赖性细胞死亡敏感。值得注意的是,许多临床批准的用于治疗其他疾病的阳离子两亲性药物在溶酶体中积累,干扰其促癌和促癌功能,破坏其膜的稳定性,从而为癌症治疗开辟了有趣的可能性。在这里,我们回顾了新出现的证据,这些证据支持使用溶酶体靶向的阳离子两亲性药物补充当前的癌症治疗。
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引用次数: 11
Cell-to-Cell Crosstalk: A New Insight into Pulmonary Hypertension. 细胞间串扰:对肺动脉高压的新认识。
2区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.1007/112_2022_70
Yan Zhang, Yun Wang

Pulmonary hypertension (PH) is a disease with high pulmonary arterial pressure, pulmonary vasoconstriction, pulmonary vascular remodeling, and microthrombosis in complex plexiform lesions, but it has been unclear of the exact mechanism of PH. A new understanding of the pathogenesis of PH is occurred and focused on the role of crosstalk between the cells on pulmonary vessels and pulmonary alveoli. It was found that the crosstalks among the endothelial cells, smooth muscle cells, fibroblasts, pericytes, alveolar epithelial cells, and macrophages play important roles in cell proliferation, migration, inflammation, and so on. Therefore, the heterogeneity of multiple pulmonary blood vessels and alveolar cells and tracking the transmitters of cell communication could be conducive to the further insights into the pathogenesis of PH to discover the potential therapeutic targets for PH.

肺动脉高压(Pulmonary hypertension, PH)是一种以肺动脉高压、肺血管收缩、肺血管重构和复杂丛状病变微血栓形成为主要表现的疾病,但其发病机制一直不清楚。本文对PH的发病机制有了新的认识,重点关注肺血管和肺泡细胞间的串扰作用。发现内皮细胞、平滑肌细胞、成纤维细胞、周细胞、肺泡上皮细胞和巨噬细胞之间的串扰在细胞增殖、迁移、炎症等方面起着重要作用。因此,研究多肺血管和肺泡细胞的异质性,追踪细胞通讯的递质,有助于进一步了解PH的发病机制,发现潜在的治疗靶点。
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引用次数: 2
The Biochemistry and Physiology of A Disintegrin and Metalloproteinases (ADAMs and ADAM-TSs) in Human Pathologies. 人类病理中的 A 型崩解酶和金属蛋白酶(ADAMs 和 ADAM-TSs)的生物化学和生理学》(The Biochemistry and Physiology of A Disintegrin and Metalloproteinases (ADAMs and ADAM-TSs) in Human Pathologies)。
2区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.1007/112_2021_67
Deepti Sharma, Nikhlesh K Singh

Metalloproteinases are a group of proteinases that plays a substantial role in extracellular matrix remodeling and its molecular signaling. Among these metalloproteinases, ADAMs (a disintegrin and metalloproteinases) and ADAM-TSs (ADAMs with thrombospondin domains) have emerged as highly efficient contributors mediating proteolytic processing of various signaling molecules. ADAMs are transmembrane metalloenzymes that facilitate the extracellular domain shedding of membrane-anchored proteins, cytokines, growth factors, ligands, and their receptors and therefore modulate their biological functions. ADAM-TSs are secretory, and soluble extracellular proteinases that mediate the cleavage of non-fibrillar extracellular matrix proteins. ADAMs and ADAM-TSs possess pro-domain, metalloproteinase, disintegrin, and cysteine-rich domains in common, but ADAM-TSs have characteristic thrombospondin motifs instead of the transmembrane domain. Most ADAMs and ADAM-TSs are activated by cleavage of pro-domain via pro-protein convertases at their N-terminus, hence directing them to various signaling pathways. In this article, we are discussing not only the structure and regulation of ADAMs and ADAM-TSs, but also the importance of these metalloproteinases in various human pathophysiological conditions like cardiovascular diseases, colorectal cancer, autoinflammatory diseases (sepsis/rheumatoid arthritis), Alzheimer's disease, proliferative retinopathies, and infectious diseases. Therefore, based on the emerging role of ADAMs and ADAM-TSs in various human pathologies, as summarized in this review, these metalloproteases can be considered as critical therapeutic targets and diagnostic biomarkers.

金属蛋白酶是一组蛋白酶,在细胞外基质重塑及其分子信号转导中发挥着重要作用。在这些金属蛋白酶中,ADAMs(一种崩解素和金属蛋白酶)和 ADAM-TSs(具有血栓松蛋白结构域的 ADAMs)已成为介导各种信号分子蛋白分解处理的高效贡献者。ADAMs 是一种跨膜金属酶,可促进膜锚蛋白、细胞因子、生长因子、配体及其受体的胞外结构域脱落,从而调节其生物功能。ADAM-TSs 是分泌性和可溶性胞外蛋白酶,可介导非纤维状细胞外基质蛋白的裂解。ADAMs 和 ADAM-TSs 都具有原结构域、金属蛋白酶结构域、崩解素结构域和富含半胱氨酸结构域,但 ADAM-TSs 具有特征性的凝血酶原结构域,而不是跨膜结构域。大多数 ADAMs 和 ADAM-TSs 都是通过其 N 端的原蛋白转化酶裂解原结构域而激活的,从而将它们导向各种信号通路。在本文中,我们不仅要讨论 ADAMs 和 ADAM-TSs 的结构和调控,还要讨论这些金属蛋白酶在心血管疾病、结直肠癌、自身炎症性疾病(败血症/类风湿性关节炎)、阿尔茨海默病、增殖性视网膜病变和传染性疾病等各种人类病理生理状况中的重要性。因此,正如本综述所总结的那样,基于 ADAMs 和 ADAM-TSs 在各种人类病症中新出现的作用,这些金属蛋白酶可被视为关键的治疗靶点和诊断生物标志物。
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引用次数: 0
Lipid Droplets in Cancer. 癌症中的脂滴。
2区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.1007/112_2020_51
Toni Petan

Lipid droplets have a unique structure among organelles consisting of a dense hydrophobic core of neutral lipids surrounded by a single layer of phospholipids decorated with various proteins. Often labeled merely as passive fat storage repositories, they in fact have a remarkably dynamic life cycle. Being formed within the endoplasmic reticulum membrane, lipid droplets rapidly grow, shrink, traverse the cytosol, and engage in contacts with other organelles to exchange proteins and lipids. Their lipid and protein composition changes dynamically in response to cellular states and nutrient availability. Remarkably, their biogenesis is induced when cells experience various forms of nutrient, energy, and redox imbalances, including lipid excess and complete nutrient deprivation. Cancer cells are continuously exposed to nutrient and oxygen fluctuations and have the capacity to switch between alternative nutrient acquisition and metabolic pathways in order to strive even during severe stress. Their supply of lipids is ensured by a series of nutrient uptake and scavenging mechanisms, upregulation of de novo lipid synthesis, repurposing of their structural lipids via enzymatic remodeling, or lipid recycling through autophagy. Importantly, most of these pathways of lipid acquisition converge at lipid droplets, which combine different lipid fluxes and control their usage based on specific cellular needs. It is thus not surprising that lipid droplet breakdown is an elaborately regulated process that occurs via a complex interplay of neutral lipases and autophagic degradation. Cancer cells employ lipid droplets to ensure energy production and redox balance, modulate autophagy, drive membrane synthesis, and control its composition, thereby minimizing stress and fostering tumor progression. As regulators of (poly)unsaturated fatty acid trafficking, lipid droplets are also emerging as modulators of lipid peroxidation and sensitivity to ferroptosis. Clearly, dysregulated lipid droplet turnover may also be detrimental to cancer cells, which should provide potential therapeutic opportunities in the future. In this review, we explore how lipid droplets consolidate lipid acquisition and trafficking pathways in order to match lipid supply with the requirements for cancer cell survival, growth, and metastasis.

脂滴在细胞器中具有独特的结构,由中性脂的致密疏水核心组成,周围是一层由各种蛋白质装饰的磷脂。它们通常被标记为被动脂肪储存库,实际上它们具有非常动态的生命周期。脂滴在内质网膜内形成,迅速生长、收缩,穿过细胞质,并与其他细胞器接触以交换蛋白质和脂质。它们的脂质和蛋白质组成随细胞状态和营养有效性而动态变化。值得注意的是,当细胞经历各种形式的营养、能量和氧化还原失衡(包括脂质过剩和完全营养剥夺)时,它们的生物发生是诱导的。癌细胞持续暴露于营养和氧气的波动中,并且有能力在不同的营养获取和代谢途径之间切换,以便在严重压力下也能生存。它们的脂质供应是由一系列营养摄取和清除机制、脂质合成的上调、通过酶重塑的结构脂质的重新利用或通过自噬的脂质循环来保证的。重要的是,大多数脂质获取途径都汇聚在脂滴上,脂滴结合了不同的脂质通量,并根据特定的细胞需要控制它们的使用。因此,脂滴分解是一个经过精心调节的过程,是通过中性脂肪酶和自噬降解的复杂相互作用而发生的,这并不奇怪。癌细胞利用脂滴来保证能量产生和氧化还原平衡,调节自噬,驱动膜合成,并控制其组成,从而减少应激,促进肿瘤进展。作为(多)不饱和脂肪酸运输的调节剂,脂滴也成为脂质过氧化和对铁下垂敏感的调节剂。显然,脂滴转换失调也可能对癌细胞有害,这应该在未来提供潜在的治疗机会。在这篇综述中,我们探讨了脂滴如何巩固脂质获取和运输途径,以使脂质供应与癌细胞生存、生长和转移的需要相匹配。
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引用次数: 47
Cancer-Related Increases and Decreases in Calcium Signaling at the Endoplasmic Reticulum-Mitochondria Interface (MAMs). 内质网-线粒体界面(MAMs)钙信号与癌症相关的增减
2区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.1007/112_2020_43
Alberto Danese, Saverio Marchi, Veronica Angela Maria Vitto, Lorenzo Modesti, Sara Leo, Mariusz R Wieckowski, Carlotta Giorgi, Paolo Pinton

Endoplasmic reticulum (ER)-mitochondria regions are specialized subdomains called also mitochondria-associated membranes (MAMs). MAMs allow regulation of lipid synthesis and represent hubs for ion and metabolite signaling. As these two organelles can module both the amplitude and the spatiotemporal patterns of calcium (Ca2+) signals, this particular interaction controls several Ca2+-dependent pathways well known for their contribution to tumorigenesis, such as metabolism, survival, sensitivity to cell death, and metastasis. Mitochondria-mediated apoptosis arises from mitochondrial Ca2+ overload, permeabilization of the mitochondrial outer membrane, and the release of mitochondrial apoptotic factors into the cytosol. Decreases in Ca2+ signaling at the ER-mitochondria interface are being studied in depth as failure of apoptotic-dependent cell death is one of the predominant characteristics of cancer cells. However, some recent papers that linked MAMs Ca2+ crosstalk-related upregulation to tumor onset and progression have aroused the interest of the scientific community.In this review, we will describe how different MAMs-localized proteins modulate the effectiveness of Ca2+-dependent apoptotic stimuli by causing both increases and decreases in the ER-mitochondria interplay and, specifically, by modulating Ca2+ signaling.

内质网(ER)-线粒体区域是专门的亚结构域,也称为线粒体相关膜(MAMs)。MAMs允许调节脂质合成,并代表离子和代谢物信号传导枢纽。由于这两种细胞器可以模化钙(Ca2+)信号的振幅和时空模式,这种特殊的相互作用控制着几种众所周知的Ca2+依赖性途径,这些途径对肿瘤的发生有贡献,如代谢、生存、对细胞死亡的敏感性和转移。线粒体介导的细胞凋亡是由线粒体Ca2+超载、线粒体外膜渗透和线粒体凋亡因子释放到细胞质中引起的。由于凋亡依赖性细胞死亡的失败是癌细胞的主要特征之一,因此正在深入研究er -线粒体界面Ca2+信号的减少。然而,最近一些将MAMs Ca2+串扰相关的上调与肿瘤的发生和进展联系起来的论文引起了科学界的兴趣。在这篇综述中,我们将描述不同的mams定位蛋白如何通过引起er -线粒体相互作用的增加和减少,特别是通过调节Ca2+信号来调节Ca2+依赖性凋亡刺激的有效性。
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引用次数: 11
Roles of Intramolecular Interactions in the Regulation of TRP Channels. 分子内相互作用在TRP通道调控中的作用。
2区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.1007/112_2022_74
Ruiqi Cai, Xing-Zhen Chen

The transient receptor potential (TRP) channels, classified into six (-A, -V, -P, -C, -M, -ML, -N and -Y) subfamilies, are important membrane sensors and mediators of diverse stimuli including pH, light, mechano-force, temperature, pain, taste, and smell. The mammalian TRP superfamily of 28 members share similar membrane topology with six membrane-spanning helices (S1-S6) and cytosolic N-/C-terminus. Abnormal function or expression of TRP channels is associated with cancer, skeletal dysplasia, immunodeficiency, and cardiac, renal, and neuronal diseases. The majority of TRP members share common functional regulators such as phospholipid PIP2, 2-aminoethoxydiphenyl borate (2-APB), and cannabinoid, while other ligands are more specific, such as allyl isothiocyanate (TRPA1), vanilloids (TRPV1), menthol (TRPM8), ADP-ribose (TRPM2), and ML-SA1 (TRPML1). The mechanisms underlying the gating and regulation of TRP channels remain largely unclear. Recent advances in cryogenic electron microscopy provided structural insights into 19 different TRP channels which all revealed close proximity of the C-terminus with the N-terminus and intracellular S4-S5 linker. Further studies found that some highly conserved residues in these regions of TRPV, -P, -C and -M members mediate functionally critical intramolecular interactions (i.e., within one subunit) between these regions. This review provides an overview on (1) intramolecular interactions in TRP channels and their effect on channel function; (2) functional roles of interplays between PIP2 (and other ligands) and TRP intramolecular interactions; and (3) relevance of the ligand-induced modulation of intramolecular interaction to diseases.

瞬时受体电位(TRP)通道分为6个亚家族(-A、-V、-P、-C、-M、-ML、-N和-Y),是重要的膜传感器和多种刺激的介质,包括pH、光、机械力、温度、疼痛、味觉和嗅觉。哺乳动物TRP超家族共有28个成员,具有类似的膜拓扑结构,具有6个跨膜螺旋(S1-S6)和细胞质N-/ c端。TRP通道的异常功能或表达与癌症、骨骼发育不良、免疫缺陷以及心脏、肾脏和神经元疾病有关。大多数TRP成员具有共同的功能调节因子,如磷脂PIP2, 2-氨基乙氧基二苯硼酸酯(2-APB)和大麻素,而其他配体则更具特异性,如异硫氰酸烯丙基(TRPA1),香草素(TRPV1),薄荷醇(TRPM8), adp核糖(TRPM2)和ML-SA1 (TRPML1)。TRP通道的门控和调控机制在很大程度上仍不清楚。低温电子显微镜的最新进展提供了19种不同TRP通道的结构见解,这些通道都显示了c端与n端以及细胞内S4-S5连接体的密切邻近。进一步的研究发现,在TRPV的这些区域,-P, -C和-M成员的一些高度保守的残基介导了这些区域之间功能关键的分子内相互作用(即在一个亚基内)。本文综述了(1)TRP通道分子内相互作用及其对通道功能的影响;(2) PIP2(和其他配体)与TRP分子内相互作用的功能作用;(3)配体诱导的分子内相互作用调节与疾病的相关性。
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引用次数: 2
Patch Clamp: The First Four Decades of a Technique That Revolutionized Electrophysiology and Beyond. 膜片钳:一项革命性的电生理学技术的前四十年。
2区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.1007/112_2022_71
Davide Lovisolo

Forty years ago, the introduction of a new electrophysiological technique, the patch clamp, revolutionized the fields of Cellular Physiology and Biophysics, providing for the first time the possibility of describing the behavior of a single protein, an ion-permeable channel of the cell plasma membrane, in its physiological environment. The new approach was actually much more potent and versatile than initially envisaged, and it has evolved into several different modalities that have radically changed our knowledge of how cells (not only the classical "electrically excitable "ones, such as nerves and muscles) use electrical signaling to modulate and organize their activity. This review aims at telling the history of the background from which the new technique evolved and at analyzing some of its more recent developments.

四十年前,一种新的电生理技术——膜片钳的引入,彻底改变了细胞生理学和生物物理学领域,首次提供了描述单个蛋白质(细胞质膜上的离子渗透通道)在其生理环境中的行为的可能性。这种新方法实际上比最初设想的更有效、更通用,它已经演变成几种不同的模式,从根本上改变了我们对细胞(不仅仅是经典的“电兴奋”细胞,如神经和肌肉)如何使用电信号来调节和组织它们的活动的认识。这篇评论的目的是讲述新技术发展的背景历史,并分析其最近的一些发展。
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引用次数: 0
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