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Quantum mechanical study on complexation phenomenon of pillar[5]arene towards neutral dicyanobutane 柱[5]芳烃与中性二氰丁烷络合现象的量子力学研究
IF 3.3 4区 化学 Q2 Chemistry Pub Date : 2021-11-02 DOI: 10.1080/10610278.2022.2151366
M. Panneerselvam, M. Deepan Kumar, Prasannan Nisanth, M. Jaccob, R. Vijay Solomon
ABSTRACT Based on density functional theory calculations, we have addressed the electronic structure, binding and nature of non-covalent interactions between alkylated pillar[5]arene (P[5]A) and 1,4-dicyanobutane (DCB)-based host-guest macrocycles. Neutral 1,4-dicyanobutane-based alkylated DCB_ProP[5]A is found to show higher binding energy when compared to the other three host-guest macrocycles. These complexes are largely stabilised by non-covalent interactions, which are ascertained through NCI and QTAIM analyses. Furthermore, the second-order perturbation energy of NBO analysis show that LP (N) – σ*(C-H) interactions predominate in DCB_ProP[5]A complex. Particularly, alkyl substituents (-methyl, -ethyl and -propyl) are playing a vital role in stabilising the host-guest complexes. In summary, the present work not only exhibits an efficient strategy to build a new family of alkylated P[5]A inclusion complexes but also providing deeper understanding on various non-covalent interactions towards 1,4-dicyanobutane (DCB) guest molecules inside the host environment. Graphical Abstract
基于密度泛函理论计算,我们研究了烷基化柱[5]芳烃(P[5]A)和1,4-二氰基丁烷(DCB)为主客体大环之间的电子结构、结合和非共价相互作用的性质。中性1,4-二氰丁烷基烷基化DCB_ProP[5]A与其他三种主-客体大环相比,显示出更高的结合能。这些复合物在很大程度上通过非共价相互作用稳定,这是通过NCI和QTAIM分析确定的。此外,NBO分析的二阶扰动能表明,DCB_ProP[5]A配合物中LP (N) - σ*(C-H)相互作用占主导地位。特别是烷基取代基(-甲基、-乙基和-丙基)在稳定主客体配合物方面起着至关重要的作用。总之,本研究不仅展示了构建烷基化P[5] a包合物新家族的有效策略,而且对宿主环境中与1,4-二氰丁烷(DCB)客体分子的各种非共价相互作用提供了更深入的了解。图形抽象
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引用次数: 0
Supramolecular host-guest and fluorescence studies on Ni-Salphen complex as a binding unit on edge oxidised graphene oxide grafted nanomaterial 边缘氧化石墨烯接枝纳米材料上Ni-Salphen配合物结合单元的超分子主客体和荧光研究
IF 3.3 4区 化学 Q2 Chemistry Pub Date : 2021-11-02 DOI: 10.1080/10610278.2022.2159824
Paulina Hernández‐Pacheco, Gustavo A. Zelada‐Guillén, M. Flores‐Álamo, Martha V. Escárcega‐Bobadilla
ABSTRACT The synthesis, characterisation, and crystallographic analysis of a novel -OH functionalised Ni-Salphen complex and its hybrid nanomaterial counterparts in the form of the molecule covalently bonded to Edge-Oxidised Graphene Oxide are described. Spectrophotometric titrations of the complex and of the nanomaterial performed against different pyridine-based guests showed a constant stoichiometry of association but different trends in association constants upon grafting. These changes could be ascribed to differences in the supramolecular environment at the binding site upon grafting, which may find cooperativity thanks to additional interactions arising from the graphene component. The spectrofluorimetric emission profile was explored before and upon association to find that emission intensity was affected in a different manner depending on whether the complex was used as a free molecule or in the hybrid nanomaterial, while it also depended on the size and flexibility of the guest used. Graphical Abstract
摘要:本文描述了一种新型-OH官能化Ni-Salphen配合物的合成、表征和晶体学分析,以及与边缘氧化石墨烯共价结合的分子形式的杂化纳米材料。对配合物和纳米材料对不同吡啶基客体进行的分光光度滴定表明,结合的化学计量常数不变,但接枝后的结合常数变化趋势不同。这些变化可以归因于接枝时结合位点的超分子环境的差异,这可能是由于石墨烯组分产生的额外相互作用而产生的协同性。在关联之前和之后对荧光光谱发射谱进行了探索,发现发射强度以不同的方式受到影响,这取决于该配合物是作为自由分子使用还是在混合纳米材料中使用,同时也取决于所使用客体的大小和灵活性。图形抽象
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引用次数: 0
Anisotropic thermal expansion effects in layered n-Alkyl carboxylic acid – bipyridyl cocrystals 层状n-烷基羧酸-联吡啶共晶的各向异性热膨胀效应
IF 3.3 4区 化学 Q2 Chemistry Pub Date : 2021-10-03 DOI: 10.1080/10610278.2022.2117623
Amy V. Hall, D. Yufit, Yingfeng Zhang, O. Musa, J. Steed
ABSTRACT Cocrystallisation of butanoic acid (BA), pentanoic acid (PA), and eicosanoic acid (EA) with 4,4’-azopyridine (azp) and trans-1,2-bis(4-pyridyl)ethylene (bpe) results in 2:1 lamellar cocrystals. All cocrystals display the OH···Npyridyl seven-membered ring supramolecular synthon however, each cocrystal responds differently upon heating. Positive thermal expansion (PTE) occurs along the c-axis due to π···π stacking in the isostructural BA cocrystals, while the PA cocrystals are not isostructural and display a mixture of anti and gauche conformations of the acid chains because of the length mismatch with the coformer. PA2·azp displays negative thermal expansion (NTE) of the intrasynthon C···O hydrogen bond. The two EA cocrystals both display c-axis elongation on warming due to the expansion of the distance between the alkyl chains. The expansion by more than 1 Å in EA2·azp is highly anisotropic, however, there is much less c-axis expansion in EA2·bpe. Graphical Abstract
丁酸(BA)、戊酸(PA)和二十烷酸(EA)与4,4′-偶氮吡啶(azp)和反式-1,2-二(4-吡啶基)乙烯(bpe)共结晶得到2:1的片层状共晶。所有共晶均显示OH···Npyridyl七元环超分子合成,但每种共晶在加热时的反应不同。BA共晶由于π··π堆积,沿c轴发生正热膨胀(PTE),而PA共晶则由于与共晶长度不匹配,呈现反和扭相混合的酸链构象。PA2·azp表现为C··O内氢键的负热膨胀(NTE)。由于烷基链之间的距离扩大,两个EA共晶在升温时均表现出c轴伸长。EA2·azp中c轴扩展幅度大于1 Å具有高度的各向异性,而EA2·bpe中c轴扩展幅度要小得多。图形抽象
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引用次数: 0
NMR pD-variation method to determine the proper stabilities of organic electrolyte complexes: case of histidine complexes with a cyclophane acid 核磁共振pd -变化法测定有机电解质配合物的适当稳定性:组氨酸与环烷酸配合物的例子
IF 3.3 4区 化学 Q2 Chemistry Pub Date : 2021-10-03 DOI: 10.1080/10610278.2022.2134017
R. Navarro, Yedith Soberanes, M. Inoue
ABSTRACT The complexation of organic electrolytes, like carboxylic acids and amines, is studied usually by spectrometric titration at a constant pH. Obtained stability constants are, however, conditional and dependent on the pH selected, differing from the proper constants. In nuclear magnetic resonance (NMR) titration in D2O, a stability constant determined at a given pD is not directly correlated to other properties observed at a pH in H2O because of difference between acid dissociations in the solvents. To overcome these problems, this report proposes pD-variable NMR spectrometry, which monitors NMR signals of a mixture of the reactants with the variation of pD. This method identifies complexes formed in different pD ranges, and determines the proper stability constants, to yield the species distribution, which can be replotted in pH scale. The usefulness and limitation are examined by simulation of titration curves. An experimental example is presented for complexation of histidine with a cyclophane acid. Excel® files for calculations are available in Supplementary material. Graphical Abstract
有机电解质(如羧酸和胺)的络合通常是通过恒定pH下的光谱滴定来研究的。然而,所获得的稳定常数是有条件的,依赖于所选择的pH,与适当的常数不同。在D2O中的核磁共振(NMR)滴定中,在给定pD下测定的稳定常数与在H2O中pH值下观察到的其他性质不直接相关,因为溶剂中酸解离的差异。为了克服这些问题,本报告提出了pD可变核磁共振光谱法,该方法可以监测随pD变化的反应物混合物的核磁共振信号。该方法鉴定了在不同pD范围内形成的配合物,并确定了合适的稳定性常数,从而得到了物质分布,并可以在pH尺度上重新绘制。通过模拟滴定曲线,验证了该方法的实用性和局限性。给出了组氨酸与环烷酸络合的实验实例。用于计算的Excel®文件可在补充材料中找到。图形抽象
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引用次数: 1
Competitive binding of aristolochic acid between various cyclodextrins and serum albumin as a model for acute poisoning detoxification 马兜铃酸在各种环糊精和血清白蛋白之间的竞争结合作为急性中毒解毒的模型
IF 3.3 4区 化学 Q2 Chemistry Pub Date : 2021-10-03 DOI: 10.1080/10610278.2022.2109472
Nika Gazdek, I. Zonjić, I. Nikšić-Franjić, Leo Leo Frkanec, I. Piantanida
ABSTRACT We showed that aristolochic acid toxin (ARI) and its fluorescent analogue form inclusion complexes with various cyclodextrins (CDs), including the clinically used γ-CD: Sugammadex. The binding affinity of ARI towards CDs varied on a CD size and rim modifications, whereby the stability of ARI/Sugammadex complex was 2-fold greater than ARI binding to serum albumin (BSA), blood protein well-known as a transporter of small molecules and similar to the ARI complex with ds-DNA. Molecular modelling supported the formation of ARI/ Sugammadex complex with carboxyl group of ARI exposed to water and ARI-condensed aromatic moiety deeply immersed into CD-cavity. These results are a proof-of-concept that CDs could be used as a first aid upon acute intoxication with ARI by binding larger part of the toxin in competition with serum albumin or ds-DNA and significantly reducing ARI absorption in the organism, similarly as Sugammadex extracts drugs from blood to stop their bioactivity. Graphical abstract
摘要研究表明,马兜铃酸毒素(ARI)及其荧光类似物可与多种环糊精(CDs)形成包合物,包括临床上常用的γ-CD: Sugammadex。ARI对CD的结合亲和力因CD大小和边缘修饰而异,其中ARI/Sugammadex复合物的稳定性比ARI与血清白蛋白(BSA)结合的稳定性高2倍,BSA是一种众所周知的小分子转运蛋白,与ARI复合物与ds-DNA相似。分子模型支持ARI/ Sugammadex配合物的形成,ARI的羧基暴露于水,而ARI凝聚的芳香部分深浸在cd腔中。这些结果证明了CDs可以作为急性急性急性中毒急性急性急性中毒的急救手段,通过结合大部分毒素与血清白蛋白或ds-DNA竞争,并显着减少机体对ARI的吸收,类似于Sugammadex从血液中提取药物以阻止其生物活性。图形抽象
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引用次数: 0
A ratiometric styryl bridging triphenylamine-indolinium based fluorescent dye for detection of cyanide with a large emission shift in human breast cancer cells and test strips 用于检测人类乳腺癌细胞和试纸中具有大发射位移的氰化物的比率苯乙烯桥接三苯胺-吲哚基荧光染料
IF 3.3 4区 化学 Q2 Chemistry Pub Date : 2021-10-03 DOI: 10.1080/10610278.2022.2135439
Mou Mandal, Anirban Karak, Satyajit Halder, Shilpita Banerjee, Anwesha Maiti, Kuladip Jana, A. Mahapatra, A. Kar
ABSTRACT A new type of styryl bridging triphenyl amine-indolium conjugated dye has been developed for the colorimetric and ratiometric detection of cyanide. The detection of cyanide is confirmed by means of the fast nucleophilic attack of cyanide by the indolium group of the probe that results a speedy sensing process for cyanide with clear color and fluorescence change of the ICT process. The ratiometric fluorescence changes illustrated a linear response in the range of 0-18 μM with a low LOD value (1.7×10-7 M-1). The as-reported sensor not only function as a colorimetric sensor for “in-the-field” measurement by virtue of a “dip-stick” approach but also interact with a human breast cancer cell (MDA-MB 231) which reveals the realistic value of this probe for tracking cyanide anions in biological systems. Graphical abstract
摘要:研制了一种新型苯乙烯桥接三苯胺-吲哚偶联染料,用于氰化物的比色和比色检测。通过探针的吲哚基团对氰化物的快速亲核攻击,证实了氰化物的检测,从而导致氰化物的快速检测过程,具有清晰的颜色和ICT过程的荧光变化。比值荧光变化在0 ~ 18 μM范围内呈线性响应,LOD值较低(1.7×10-7 M-1)。据报道,该传感器不仅可以作为“现场”测量的比色传感器,而且还可以与人乳腺癌细胞(MDA-MB 231)相互作用,这揭示了该探针在生物系统中追踪氰化物阴离子的现实价值。图形抽象
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引用次数: 2
Centrosymmetric paddlewheel copper(II) complexes as potent intercalators: synthesis, crystal structure description and DNA-binding studies 中心对称桨轮铜(II)配合物作为强插层剂:合成、晶体结构描述和dna结合研究
IF 3.3 4区 化学 Q2 Chemistry Pub Date : 2021-10-03 DOI: 10.1080/10610278.2022.2137412
A. Mushtaq, M. Iqbal, Saqib Ali, M. Tahir
ABSTRACT Two copper(II) paddlewheel carboxylate complexes 1 and 2 of the general formula ACuL4CuA, where A is DMSO (1) and meta-bromopyridine (2) and L is meta-chlorophenyl acetate, have been synthesised, isolated quantitatively, crystallised and characterised using FTIR, UV-Visible spectroscopy, electrochemistry and XRD. FTIR spectra contained all the required peaks with the most prominent peaks those of carboxylate moiety indicating the bridging bidentate carboxylate binding mode. Electrochemistry yielded results typical of complexes containing Cu2+ centres. The structures were completely solved by XRD technique assigning square pyramidal geometry to each copper ion of the dinuclear complexes. The square base is formed by four oxygen atoms of the carboxylate moiety while the apical position is occupied by the fifth oxygen (of the DMSO molecule in 1) or nitrogen of the meta-bromopyridine in complex 2. The DNA-binding potency of the complexes was explored by viscometry, cyclic voltammetry, UV-Visible spectrophotometry and spectrofluorimetry. All these techniques provided coincident results and showed that the complexes bonded with DNA via an intercalative-binding mode. Additionally, these complexes were found to scavenge the free radical DPPH effectively. The complexes add interesting and valuable addition to the existing treasury on the copper paddlewheel complexes and their biological relevance. Graphical Abstract
摘要合成了两种铜(II)桨轮羧酸配合物1和2,其通式为ACuL4CuA,其中A为DMSO(1)和间溴吡啶(2),L为间氯苯乙酸酯,采用FTIR、uv -可见光谱、电化学和XRD进行了定量分离、结晶和表征。FTIR光谱包含所有要求的峰,羧酸部分的峰最突出,表明桥接双齿羧酸结合模式。电化学得到了典型的含Cu2+中心配合物的结果。用x射线衍射(XRD)技术对双核配合物的铜离子进行了方锥体结构分析。方基由羧酸部分的4个氧原子组成,而顶端位置由配合物2中邻溴吡啶分子的第5个氧原子或氮占据。通过黏度法、循环伏安法、紫外可见分光光度法和荧光光谱法研究了配合物的dna结合能力。所有这些技术都提供了一致的结果,表明复合物通过插入结合模式与DNA结合。此外,这些复合物还能有效清除自由基DPPH。这些配合物为铜桨轮配合物及其生物学相关性的现有宝库增加了有趣和有价值的补充。图形抽象
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引用次数: 0
Application of pyrrolidinomethylcalix[4]arene coated silica adsorbent for the removal of Chicago sky blue 6B dye from water samples: Equilibrium and computational modelling studies 吡咯烷二甲基萼[4]芳烃包覆二氧化硅吸附剂在去除水样中芝加哥天蓝6B染料中的应用:平衡和计算模型研究
IF 3.3 4区 化学 Q2 Chemistry Pub Date : 2021-10-03 DOI: 10.1080/10610278.2022.2134016
Ranjhan Junejo, Nida Shams Jalbani, S. Kaya, S. Erkan, E. Ebenso
ABSTRACT In this study, silica surface has been coated using pyrrolidinomethylcalix[4]arene through the chemical modification of silanol groups. The pyrrolidinomethylcalix[4]arene-coated silica (PCS) adsorbent was characterized using the Fourier transform infrared and scanning electron microscopic technique. The adsorptive removal efficiency of PCS adsorbent was checked through batch studies with various effective parameters such adsorbent dose, pH, and temperature. During experiments, it has been observed that maximum adsorption was achieved in acidic to neutral pH and 25 mg.L−1 of PCS dose, while the kinetic models demonstrates that the pseudo 2nd order equation was the best fit (R2 0.99). The thermodynamic experiments described that the reaction is exothermic and spontaneous. Furthermore, equilibrium models were applied on experimental data and it has been noticed that the equilibrium data was best-fitted with Langmuir isotherm model (R2 0.99). The DFT analysis of dye molecule is helpful to examine the chemical interaction sites of absorbent and adsorbent using B3LYP/LANL2DZ/6-311++G (d,p) level using G09W software. Graphical Abstract
摘要本研究通过对硅醇基进行化学修饰,将吡咯烷二甲基杯[4]芳烃包覆在二氧化硅表面。采用傅里叶变换红外和扫描电镜技术对吡咯烷二甲基杯芳烃包覆二氧化硅(PCS)吸附剂进行了表征。通过对PCS吸附剂剂量、pH、温度等不同有效参数的批量研究,考察了PCS吸附剂的吸附去除效果。在实验中,观察到在酸性到中性pH值和25mg时吸附量最大。L−1,而动力学模型表明伪二阶方程拟合最佳(R2 0.99)。热力学实验表明该反应是自发的放热反应。利用平衡模型对实验数据进行拟合,发现平衡数据最适合Langmuir等温线模型(R2 0.99)。利用G09W软件采用B3LYP/LANL2DZ/6-311++G (d,p)水平对染料分子进行DFT分析,有助于检测吸收剂和吸附剂的化学相互作用位点。图形抽象
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引用次数: 0
Roseophilin-inspired derivatives as transmembrane anion carriers 玫瑰红素衍生物作为跨膜阴离子载体
IF 3.3 4区 化学 Q2 Chemistry Pub Date : 2021-09-02 DOI: 10.1080/10610278.2022.2099277
Sandra Díaz-Cabrera, Israel Carreira-Barral, M. García-Valverde, R. Quesada
ABSTRACT Roseophilin is an alkaloid structurally related to prodiginines . The intriguing pharmacological properties of these derivatives have prompted us to prepare synthetic compounds 1–3 inspired by their structure and to explore their transmembrane anion transport activity. The methoxyfuran heterocycle impacts the anionophoric activity of the compounds as a result of the reduced hydrogen-bonding ability and electrostatic repulsions between the oxygen in the furan ring and the anions. The position of the furan was also found to be crucial for determining their anion transport activity. Overall, replacement of the characteristic methoxypyrrole moiety of prodiginines and tambjamines by the methoxyfuran found in roseophilin is detrimental to their ability as anion carriers, suggesting that the biological activity of roseophilin is likely not related to their potential activity as anion carriers. Compound 2, bearing a furan ring attached to a dipyrromethene moiety, was found to be the most active anion carrier. GRAPHICAL ABSTRACT
亲玫瑰碱是一种与子碱结构相似的生物碱。这些衍生物有趣的药理特性促使我们根据它们的结构制备合成化合物1-3,并探索它们的跨膜阴离子转运活性。甲氧基呋喃杂环由于降低了呋喃环上氧与阴离子之间的氢键能力和静电斥力而影响了化合物的阴离子活性。呋喃的位置也被发现对确定它们的阴离子运输活性至关重要。总的来说,在亲玫瑰素中发现的甲氧呋喃取代了特有的甲基吡咯部分,这不利于它们作为阴离子载体的能力,这表明亲玫瑰素的生物活性可能与它们作为阴离子载体的潜在活性无关。化合物2是最活跃的阴离子载体,其呋喃环与二吡咯烷基团相连。图形抽象
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引用次数: 0
Stimuli-responsive supramolecular dye inclusion complex constructed by self-assembly of inverted cucurbit[7]uril and thioflavin T 反向葫芦[7]与硫黄素自组装构建的刺激响应超分子染料包合物
IF 3.3 4区 化学 Q2 Chemistry Pub Date : 2021-09-02 DOI: 10.1080/10610278.2022.2109471
Hui Zhao, Wen-Jie Chen, Hao Chen, Jifu Sun, Zhong‐Zheng Gao
ABSTRACT A novel 1:1 supramolecular dye inclusion complex between inverted cucurbit[7]uril (iQ[7]) and Thioflavin T (THT) has been successfully constructed on the basis of host–guest recognition. The obtained results revealed that THT exhibited obvious iQ[7]-induced fluorescence enhancement in this inclusion complex system, and the N-dimethyl and benzene ring moiety of the guest THT were located inside the cavity of iQ[7], whereas the other section of THT remained outside the portal. And THT@iQ[7] was highly stimuli-responsive to competing guests. These results provided a possibility for application in the molecular recognition area. Graphical Abstract
在主客体识别的基础上,成功构建了一种新型的倒置葫芦[7]乌尔(iQ[7])与硫黄素T (THT)之间的1:1超分子染料包合物。结果表明,THT在该包合物体系中表现出明显的iQ诱导的荧光增强[7],并且客体THT的n -二甲基和苯环部分位于iQ的空腔内[7],而THT的其他部分则位于门洞外。而THT@iQ[7]对竞争的客人表现出高度的刺激反应。这些结果为分子识别领域的应用提供了可能。图形抽象
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引用次数: 1
期刊
Supramolecular Chemistry
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