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Image-based temporal alignment of echocardiographic sequences 超声心动图序列的基于图像的时间对齐
Pub Date : 2016-04-01 DOI: 10.1117/12.2216192
A. Danudibroto, J. Bersvendsen, O. Mirea, O. Gérard, J. D’hooge, E. Samset
Temporal alignment of echocardiographic sequences enables fair comparisons of multiple cardiac sequences by showing corresponding frames at given time points in the cardiac cycle. It is also essential for spatial registration of echo volumes where several acquisitions are combined for enhancement of image quality or forming larger field of view. In this study, three different image-based temporal alignment methods were investigated. First, a method based on dynamic time warping (DTW). Second, a spline-based method that optimized the similarity between temporal characteristic curves of the cardiac cycle using 1D cubic B-spline interpolation. Third, a method based on the spline-based method with piecewise modification. These methods were tested on in-vivo data sets of 19 echo sequences. For each sequence, the mitral valve opening (MVO) time was manually annotated. The results showed that the average MVO timing error for all methods are well under the time resolution of the sequences.
超声心动图序列的时间序列通过在心脏周期的给定时间点显示相应的帧,可以公平地比较多个心脏序列。它对于回声体的空间配准也是必不可少的,其中几个采集相结合以增强图像质量或形成更大的视场。在本研究中,研究了三种不同的基于图像的时间对齐方法。首先,提出一种基于动态时间规整(DTW)的方法。其次,提出了一种基于样条的方法,利用一维三次b样条插值优化心脏周期时间特征曲线之间的相似性。第三,提出了一种基于样条法的分段修正方法。这些方法在19个回声序列的体内数据集上进行了测试。对于每个序列,人工标注二尖瓣打开(MVO)时间。结果表明,在序列的时间分辨率下,所有方法的平均MVO时序误差都很好。
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引用次数: 3
Real-time 3D image reconstruction of a 24×24 row-column addressing array: from raw data to image 实时三维图像重建24×24行-列寻址数组:从原始数据到图像
Pub Date : 2016-04-01 DOI: 10.1117/12.2216069
Chunyu Li, Jiali Yang, Xu Li, Xiaoli Zhong, J. Song, Mingyue Ding, M. Yuchi
This paper presents a work of real-time 3-D image reconstruction for a 7.5-MHz, 24×24 row-column addressing array transducer. The transducer works with a predesigned transmit/receive module. After the raw data are captured by the NI PXIe data acquisition (DAQ) module, the following processing procedures are performed: delay and sum (DAS), base-line calibration, envelope detection, logarithm compression, down-sampling, gray scale mapping and 3-D display. These procedures are optimized for obtaining real-time 3-D images. Fixed-point focusing scheme is applied in delay and sum (DAS) to obtain line data from channel data. Zero-phase high-pass filter is used to calibrate the base-line shift of echo. The classical Hilbert transformation is adopted to detect the envelopes of echo. Logarithm compression is implemented to enlarge the weak signals and narrow the gap from the strong ones. Down-sampling reduces the amount of data to improve the processing speed. Linear gray scale mapping is introduced that the weakest signal is mapped to 0 and the strongest signal 255. The real-time 3-D images are displayed with multi-planar mode, which shows three orthogonal sections (vertical section, coronal section, transverse section). A trigger signal is sent from the transmit/receive module to the DAQ module at the start of each volume data generation to ensure synchronization between these two modules. All procedures, include data acquisition (DAQ), signal processing and image display, are programmed on the platform of LabVIEW. 675MB raw echo data are acquired in one minute to generate 24×24×48, 27fps 3-D images. The experiment on the strong reflection object (aluminum slice) shows the feasibility of the whole process from raw data to real-time 3-D images.
本文介绍了一种7.5 mhz 24×24行列寻址阵列传感器的实时三维图像重建工作。换能器与预先设计的发送/接收模块一起工作。NI PXIe数据采集(DAQ)模块采集原始数据后,进行延迟和(DAS)、基线校准、包络检测、对数压缩、下采样、灰度映射和三维显示等处理程序。这些程序为获得实时三维图像进行了优化。在延迟求和(DAS)中采用定点聚焦方案从信道数据中获取线路数据。采用零相高通滤波器对回波的基线位移进行校正。采用经典的希尔伯特变换检测回波包络。采用对数压缩来放大弱信号,缩小与强信号的差距。下采样减少了数据量,从而提高了处理速度。引入线性灰度映射,将最弱的信号映射为0,最强的信号映射为255。实时三维图像采用多平面模式显示,显示3个正交切片(纵切面、冠状面、横切面)。在每个卷数据生成开始时,从发送/接收模块向DAQ模块发送一个触发信号,以确保这两个模块之间的同步。数据采集、信号处理、图像显示等程序均在LabVIEW平台上完成。在一分钟内获取675MB原始回波数据,生成24×24×48, 27fps的3d图像。在强反射物体(铝片)上的实验证明了从原始数据到实时三维图像全过程的可行性。
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引用次数: 3
Volumetric synthetic aperture imaging with a piezoelectric 2D row-column probe 基于压电二维排柱探头的体积合成孔径成像
Pub Date : 2016-04-01 DOI: 10.1117/12.2216074
H. Bouzari, Mathias Engholm, T. Christiansen, C. Beers, A. Lei, M. Stuart, S. Nikolov, E. Thomsen, J. Jensen
The synthetic aperture (SA) technique can be used for achieving real-time volumetric ultrasound imaging using 2-D row-column addressed transducers. This paper investigates SA volumetric imaging performance of an in-house prototyped 3 MHz λ/2-pitch 62+62 element piezoelectric 2-D row-column addressed transducer array. Utilizing single element transmit events, a volume rate of 90 Hz down to 14 cm deep is achieved. Data are obtained using the experimental ultrasound scanner SARUS with a 70 MHz sampling frequency and beamformed using a delay-and-sum (DAS) approach. A signal-to-noise ratio of up to 32 dB is measured on the beamformed images of a tissue mimicking phantom with attenuation of 0.5 dB cm-1 MHz-1, from the surface of the probe to the penetration depth of 300λ. Measured lateral resolution as Full-Width-at-Half-Maximum (FWHM) is between 4λ and 10λ for 18% to 65% of the penetration depth from the surface of the probe. The averaged contrast is 13 dB for the same range. The imaging performance assessment results may represent a reference guide for possible applications of such an array in different medical fields.
合成孔径(SA)技术可用于实现实时体积超声成像使用二维行列寻址换能器。本文研究了一种自制的3mhz λ/2-螺距62+62单元压电二维行列寻址传感器阵列的SA体积成像性能。利用单元件传输事件,可以实现90 Hz的体积速率,深度可达14厘米。数据使用实验超声扫描仪SARUS获得,采样频率为70 MHz,波束形成采用延迟和(DAS)方法。在从探头表面到穿透深度为300λ的衰减为0.5 dB cm-1 MHz-1的组织模拟幻影的波束形成图像上测量了高达32 dB的信噪比。测量的横向分辨率为半最大全宽度(FWHM),在距离探头表面18%至65%的穿透深度范围内,分辨率在4λ至10λ之间。在相同的范围内,平均对比度为13 dB。成像性能评估结果可为该阵列在不同医学领域的可能应用提供参考指南。
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引用次数: 7
Differential diagnosis of thyroid nodules with virtual touch tissue imaging of ARFI elastography ARFI弹性成像的虚拟触摸组织成像对甲状腺结节的鉴别诊断
Pub Date : 2016-04-01 DOI: 10.1117/12.2216190
Tao Li, Pei Zhou, Mingyue Ding, Yongwei Mi, Yiyong Li, Ji Zhang
The aim of this study was to evaluate the diagnostic performance of virtual touch tissue imaging (VTI) based on ARFI elastography technique for differentiating malignant from benign thyroid nodules. One hundred pathologically proven thyroid nodules (80 benign, 20 malignant) in 76 participants were recruited in this study. The likelihood of malignancy in the light of VTI features was scored into 6 levels by one experienced sonogist who was blinded to pathological results. In addition, the mean gray value within the thyroid nodule (mGVTN) derived from VTI image was calculated for quantitative analysis. Receiver-operating characteristic curve (ROC) analyses were performed to assess the diagnostic performance of VTI score and mGVTN. The frequency of malignant nodules (11/20) classified between VTI levels 4 to 6 was more than that of benign nodules (6/80) (p <0.001). The mGVTN of malignant nodules (45±23) was significantly lower than that of benign nodules (115±58) (p <0.001), where the range of mGVTN was from 0 to 255. The sensitivity, specificity, accuracy, positive predictive value and negative predictive value of VTI score were 55.0%, 92.5%, 85.0%, 64.7% and 89.2%, respectively. For mGVTN, those values were 70.0%, 90.0%, 86.0%, 63.6% and 92.3%, respectively. In conclusion, the VTI image seemed to be an effective tool in the differential diagnosis of thyroid nodules. The diagnosis performance of mGVTN was almost consistent with that of VTI score, which indicated that the mGVTN as a quantitative parameter might facilitate doctors diagnosing malignant thyroid nodules by VTI.
本研究的目的是评估基于ARFI弹性成像技术的虚拟触摸组织成像(VTI)对甲状腺结节良恶性鉴别的诊断性能。本研究招募了76名参与者的100个病理证实的甲状腺结节(80个良性,20个恶性)。根据VTI特征,恶性肿瘤的可能性由一位经验丰富的超声医师评分为6个级别,他对病理结果一无所知。此外,计算由VTI图像得到的甲状腺结节内平均灰度值(mGVTN)进行定量分析。采用受试者工作特征曲线(ROC)分析评价VTI评分和mGVTN的诊断价值。VTI分级在4 ~ 6级的恶性结节(11/20)多于良性结节(6/80)(p <0.001)。恶性结节的mGVTN(45±23)明显低于良性结节(115±58)(p <0.001),其mGVTN范围为0 ~ 255。VTI评分的敏感性、特异性、准确性、阳性预测值和阴性预测值分别为55.0%、92.5%、85.0%、64.7%和89.2%。对于mGVTN,这些值分别为70.0%、90.0%、86.0%、63.6%和92.3%。综上所述,VTI图像似乎是甲状腺结节鉴别诊断的有效工具。mGVTN的诊断效果与VTI评分的诊断效果基本一致,说明mGVTN作为定量参数可能有助于医生利用VTI诊断甲状腺恶性结节。
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引用次数: 0
Ultrasound breast imaging using frequency domain reverse time migration 超声乳房成像的频域逆时偏移
Pub Date : 2016-04-01 DOI: 10.1117/12.2218366
O. Roy, M. Zuberi, R. Pratt, N. Duric
Conventional ultrasonography reconstruction techniques, such as B-mode, are based on a simple wave propagation model derived from a high frequency approximation. Therefore, to minimize model mismatch, the central frequency of the input pulse is typically chosen between 3 and 15 megahertz. Despite the increase in theoretical resolution, operating at higher frequencies comes at the cost of lower signal-to-noise ratio. This ultimately degrades the image contrast and overall quality at higher imaging depths. To address this issue, we investigate a reflection imaging technique, known as reverse time migration, which uses a more accurate propagation model for reconstruction. We present preliminary simulation results as well as physical phantom image reconstructions obtained using data acquired with a breast imaging ultrasound tomography prototype. The original reconstructions are filtered to remove low-wavenumber artifacts that arise due to the inclusion of the direct arrivals. We demonstrate the advantage of using an accurate sound speed model in the reverse time migration process. We also explain how the increase in computational complexity can be mitigated using a frequency domain approach and a parallel computing platform.
传统的超声重建技术,如b模式,是基于一个简单的波传播模型,从高频近似推导。因此,为了最小化模型不匹配,输入脉冲的中心频率通常选择在3到15兆赫之间。尽管理论分辨率有所提高,但在更高频率下工作的代价是较低的信噪比。这最终会降低较高成像深度下的图像对比度和整体质量。为了解决这个问题,我们研究了一种反射成像技术,称为逆时偏移,它使用更精确的传播模型进行重建。我们提出了初步的模拟结果,以及利用乳房成像超声断层扫描原型获得的数据获得的物理幻象图像重建。对原始重建进行过滤,以去除由于包含直接到达而产生的低波数伪影。我们证明了在逆时偏移过程中使用精确声速模型的优势。我们还解释了如何使用频域方法和并行计算平台来减轻计算复杂性的增加。
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引用次数: 9
Quantitative head ultrasound measurements to determine thresholds for preterm neonates requiring interventional therapies following intraventricular hemorrhage 定量头部超声测量以确定脑室内出血后需要介入治疗的早产儿的阈值
Pub Date : 2016-04-01 DOI: 10.1117/12.2216870
J. Kishimoto, A. Fenster, F. Salehi, W. Romano, David S. C. Lee, S. de Ribaupierre
Dilation of the cerebral ventricles is a common condition in preterm neonates with intraventricular hemorrhage (IVH). This post hemorrhagic ventricle dilation (PHVD) can lead to lifelong neurological impairment through ischemic injury due to increased intracranial pressure and without treatment, can lead to death. Clinically, 2D ultrasound (US) through the fontanelles ('soft spots') of the patients are serially acquired to monitor the progression of the ventricle dilation. These images are used to determine when interventional therapies such as needle aspiration of the built up cerebrospinal fluid (CSF) ('ventricle tap', VT) might be indicated for a patient; however, quantitative measurements of the growth of the ventricles are often not performed. There is no consensus on when a neonate with PHVD should have an intervention and often interventions are performed after the potential for brain damage is quite high. Previously we have developed and validated a 3D US system to monitor the progression of ventricle volumes (VV) in IVH patients. We will describe the potential utility of quantitative 2D and 3D US to monitor and manage PHVD in neonates. Specifically, we will look to determine image-based measurement thresholds for patients who will require VT in comparison to patients with PHVD who resolve without intervention. Additionally, since many patients who have an initial VT will require subsequent interventions, we look at the potential for US to determine which PHVD patients will require additional VT after the initial one has been performed.
脑室扩张是早产儿脑室内出血(IVH)的常见情况。这种出血性脑室扩张(PHVD)可通过颅内压升高引起的缺血性损伤导致终身神经功能损害,如果不进行治疗,可导致死亡。临床上,通过连续获得患者囟门(“软点”)的二维超声(US)来监测心室扩张的进展。这些图像用于确定何时需要对患者进行介入治疗,如针吸积聚的脑脊液(“脑室穿刺”,VT);然而,通常不进行心室生长的定量测量。对于PHVD的新生儿何时应该进行干预尚无共识,通常在脑损伤的可能性很高之后进行干预。之前,我们已经开发并验证了一种3D US系统来监测IVH患者心室容积(VV)的进展。我们将描述定量2D和3D US在监测和管理新生儿PHVD方面的潜在效用。具体来说,我们将考虑确定需要VT的患者与不经干预而消退的PHVD患者的基于图像的测量阈值。此外,由于许多有初始VT的患者将需要后续的干预,我们研究了美国的潜力,以确定哪些PHVD患者在初始VT后需要额外的VT。
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引用次数: 4
Novel approaches to address spectral distortions in photon counting x-ray CT using artificial neural networks 利用人工神经网络解决光子计数x射线CT光谱畸变的新方法
Pub Date : 2016-04-01 DOI: 10.1117/12.2217037
M. Touch, D. Clark, W. Barber, C. Badea
Spectral CT using a photon-counting x-ray detector (PCXD) can potentially increase accuracy of measuring tissue composition. However, PCXD spectral measurements suffer from distortion due to charge sharing, pulse pileup, and Kescape energy loss. This study proposes two novel artificial neural network (ANN)-based algorithms: one to model and compensate for the distortion, and another one to directly correct for the distortion. The ANN-based distortion model was obtained by training to learn the distortion from a set of projections with a calibration scan. The ANN distortion was then applied in the forward statistical model to compensate for distortion in the projection decomposition. ANN was also used to learn to correct distortions directly in projections. The resulting corrected projections were used for reconstructing the image, denoising via joint bilateral filtration, and decomposition into three-material basis functions: Compton scattering, the photoelectric effect, and iodine. The ANN-based distortion model proved to be more robust to noise and worked better compared to using an imperfect parametric distortion model. In the presence of noise, the mean relative errors in iodine concentration estimation were 11.82% (ANN distortion model) and 16.72% (parametric model). With distortion correction, the mean relative error in iodine concentration estimation was improved by 50% over direct decomposition from distorted data. With our joint bilateral filtration, the resulting material image quality and iodine detectability as defined by the contrast-to-noise ratio were greatly enhanced allowing iodine concentrations as low as 2 mg/ml to be detected. Future work will be dedicated to experimental evaluation of our ANN-based methods using 3D-printed phantoms.
使用光子计数x射线探测器(PCXD)的光谱CT可以潜在地提高测量组织成分的准确性。然而,由于电荷共享、脉冲堆积和Kescape能量损失,PCXD光谱测量受到畸变的影响。本文提出了两种新的基于人工神经网络(ANN)的算法:一种是对失真进行建模和补偿,另一种是直接对失真进行校正。通过训练得到基于人工神经网络的畸变模型,通过校准扫描从一组投影中学习畸变。在正演统计模型中应用人工神经网络畸变来补偿投影分解中的畸变。人工神经网络也被用来学习直接纠正投影中的扭曲。校正后的投影用于重建图像,通过联合双边滤波去噪,并分解为康普顿散射、光电效应和碘三种物质基函数。事实证明,与使用不完善的参数失真模型相比,基于人工神经网络的失真模型对噪声的鲁棒性更强,效果更好。在噪声存在的情况下,人工神经网络模型估计碘浓度的平均相对误差为11.82%,参数模型为16.72%。经过畸变校正后,碘浓度估计的平均相对误差比从畸变数据直接分解的平均相对误差提高了50%。通过我们的联合双边过滤,所得的材料图像质量和碘的可检测性(由对比噪声比定义)大大增强,允许检测低至2 mg/ml的碘浓度。未来的工作将致力于使用3d打印的模型对我们基于人工神经网络的方法进行实验评估。
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引用次数: 3
Development of estimation system of knee extension strength using image features in ultrasound images of rectus femoris 基于股直肌超声图像特征的膝关节伸展强度估计系统的开发
Pub Date : 2016-04-01 DOI: 10.1117/12.2214843
Hiroki Murakami, Tsuneo Watanabe, D. Fukuoka, N. Terabayashi, T. Hara, C. Muramatsu, H. Fujita
The word "Locomotive syndrome" has been proposed to describe the state of requiring care by musculoskeletal disorders and its high-risk condition. Reduction of the knee extension strength is cited as one of the risk factors, and the accurate measurement of the strength is needed for the evaluation. The measurement of knee extension strength using a dynamometer is one of the most direct and quantitative methods. This study aims to develop a system for measuring the knee extension strength using the ultrasound images of the rectus femoris muscles obtained with non-invasive ultrasonic diagnostic equipment. First, we extract the muscle area from the ultrasound images and determine the image features, such as the thickness of the muscle. We combine these features and physical features, such as the patient’s height, and build a regression model of the knee extension strength from training data. We have developed a system for estimating the knee extension strength by applying the regression model to the features obtained from test data. Using the test data of 168 cases, correlation coefficient value between the measured values and estimated values was 0.82. This result suggests that this system can estimate knee extension strength with high accuracy.
“机车综合征”一词已被提出用来描述肌肉骨骼疾病及其高危状况需要护理的状态。膝关节伸展强度降低被认为是危险因素之一,评估时需要准确测量膝关节伸展强度。使用测功机测量膝关节伸展强度是最直接和定量的方法之一。本研究旨在开发一种利用非侵入性超声诊断设备获得的股直肌超声图像来测量膝关节伸展强度的系统。首先,我们从超声图像中提取肌肉区域,并确定图像特征,如肌肉的厚度。我们将这些特征与患者身高等身体特征结合起来,从训练数据中构建膝关节伸展力量的回归模型。我们开发了一个系统,通过将回归模型应用于从测试数据中获得的特征来估计膝关节伸展强度。使用168例试验数据,实测值与估计值的相关系数值为0.82。结果表明,该系统可以较准确地估计膝关节伸展强度。
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引用次数: 1
Iterative CT reconstruction using coordinate descent with ordered subsets of data 基于有序数据子集的坐标下降迭代CT重建
Pub Date : 2016-04-01 DOI: 10.1117/12.2217558
F. Noo, K. Hahn, H. Schöndube, K. Stierstorfer
Image reconstruction based on iterative minimization of a penalized weighted least-square criteria has become an important topic of research in X-ray computed tomography. This topic is motivated by increasing evidence that such a formalism may enable a significant reduction in dose imparted to the patient while maintaining or improving image quality. One important issue associated with this iterative image reconstruction concept is slow convergence and the associated computational effort. For this reason, there is interest in finding methods that produce approximate versions of the targeted image with a small number of iterations and an acceptable level of discrepancy. We introduce here a novel method to produce such approximations: ordered subsets in combination with iterative coordinate descent. Preliminary results demonstrate that this method can produce, within 10 iterations and using only a constant image as initial condition, satisfactory reconstructions that retain the noise properties of the targeted image.
基于惩罚加权最小二乘准则迭代最小化的图像重建已成为x射线计算机断层扫描研究的一个重要课题。越来越多的证据表明,这种形式可以在保持或改善图像质量的同时显着减少给予患者的剂量,从而激发了本主题。与这种迭代图像重建概念相关的一个重要问题是缓慢的收敛和相关的计算量。由于这个原因,有兴趣寻找方法产生目标图像的近似版本,迭代次数少,差异程度可接受。本文提出了一种新的逼近方法:有序子集与迭代坐标下降相结合。初步结果表明,该方法可以在10次迭代内,仅以恒定图像为初始条件,产生令人满意的重建,并保留目标图像的噪声特性。
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引用次数: 3
Direct reconstruction of enhanced signal in computed tomography perfusion 计算机断层扫描灌注增强信号的直接重建
Pub Date : 2016-04-01 DOI: 10.1117/12.2216998
Bin Li, Qingwen Lyu, Jianhua Ma, Jing Wang
High imaging dose has been a concern in computed tomography perfusion (CTP) as repeated scans are performed at the same location of a patient. On the other hand, signal changes only occur at limited regions in CT acquired at different time points. In this work, we propose a new reconstruction strategy by effectively utilizing the initial phase high-quality CT to reconstruct the later phase CT acquired with a low-dose protocol. In the proposed strategy, initial high-quality CT is considered as a base image and enhanced signal (ES) is reconstructed directly by minimizing the penalized weighted least-square (PWLS) criterion. The proposed PWLS-ES strategy converts the conventional CT reconstruction into a sparse signal reconstruction problem. Digital and anthropomorphic phantom studies were performed to evaluate the performance of the proposed PWLS-ES strategy. Both phantom studies show that the proposed PWLS-ES method outperforms the standard iterative CT reconstruction algorithm based on the same PWLS criterion according to various quantitative metrics including root mean squared error (RMSE) and the universal quality index (UQI).
高成像剂量一直是计算机断层扫描灌注(CTP)的一个问题,因为在患者的同一位置进行重复扫描。另一方面,在不同时间点获取的CT中,信号变化只发生在有限的区域。在这项工作中,我们提出了一种新的重建策略,即有效地利用初始阶段高质量CT来重建以低剂量方案获得的后期CT。该策略将初始高质量CT作为基图像,通过最小化加权最小二乘(PWLS)准则直接重构增强信号。所提出的PWLS-ES策略将传统的CT重构问题转化为稀疏信号重构问题。进行了数字和拟人化幻影研究,以评估所提出的PWLS-ES策略的性能。两项幻像研究均表明,在均方根误差(RMSE)和通用质量指数(UQI)等量化指标上,所提出的PWLS- es方法优于基于相同PWLS标准的标准迭代CT重建算法。
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引用次数: 0
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SPIE Medical Imaging
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