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Establishment of vascularized human retinal organoids from induced pluripotent stem cells.
IF 4 2区 医学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-03-04 DOI: 10.1093/stmcls/sxae093
Satoshi Inagaki, Shinsuke Nakamura, Yoshiki Kuse, Kota Aoshima, Michinori Funato, Masamitsu Shimazawa, Hideaki Hara

Stem cell-derived retinal organoids (ROs) have been investigated for applications in regenerative medicine, retinal disease models, and compound safety evaluation. Although the development of 3D organoids has provided novel opportunities for innovation, some unresolved limitations continue to exist in organoid research. The passive diffusion of oxygen and nutrients limits the growth and functional gain of organoids. Vascularization may circumvent these problems because it allows oxygen and nutrients to enter the organoid core. In the present study, ROs and vascular organoids (VOs) were generated from healthy human induced pluripotent stem cells. We attempted to create vascular-like structures in ROs by co-culturing them with VO-derived vascular endothelial cells/pericytes. Our vascularized retinal organoids (vROs) contained type IV collagen- and CD31-positive vascular-like structures. The expression of the mature neuronal marker SMI-32 and SNCG was markedly higher in the vROs than in the ROs. When vROs were cultured under conditions that mimicked diabetes, their size and the number of retinal ganglion cells were significantly decreased. In conclusion, the co-culture of ROs with VO-derived cells enabled the production of ROs with vascular-like structures, and the vROs responded to severe diabetic retinopathy conditions. In summary, our findings underscore the potential of vROs as invaluable tools for elucidating disease mechanisms and screening therapeutic interventions for retinal vascular disorders, thereby paving the way for personalized medicine approaches in ophthalmology.

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引用次数: 0
Single-cell transcriptome sequencing in synovial joint: insights of new progenitors and targets in joint development and disease.
IF 4 2区 医学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-02-17 DOI: 10.1093/stmcls/sxaf008
Ziqian Wang, Xianni Yang, Haopeng Yu, Songsong Zhu, Ruiye Bi

Synovial joints, such as knee, temporomandibular, and spinal joints, play a key role in human movement and postural maintenance. Biological research has focused on understanding their developmental process and disease mechanisms. In recent years, the rapid development of single-cell transcriptome sequencing has provided a powerful tool for revealing the mysteries of synovial joints. Single-cell transcriptome sequencing can accurately capture the gene expression profile of each cell, thereby revealing the heterogeneity and interactions of different cell types in synovial joints. During joint development, this technique contributes to elucidating the molecular mechanisms of joint formation, cartilage differentiation, and synovial tissue construction. In terms of joint disease research, single-cell sequencing technology has been applied to the molecular pathology studies of various joint diseases such as osteoarthritis, rheumatoid arthritis, and intervertebral disk degeneration, providing new perspectives and strategies for early diagnosis, accurate treatment, and prognosis assessment of diseases.

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引用次数: 0
Raman Spectroscopies for Cancer Research and Clinical Applications: a Focus on Cancer Stem Cells.
IF 4 2区 医学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-02-14 DOI: 10.1093/stmcls/sxae084
Francesca Pagliari, Luca Tirinato, Enzo Di Fabrizio

Over the last two decades, research has increasingly focused on Cancer Stem Cells (CSCs), considered responsible for tumor formation, resistance to therapies, and relapse. The traditional "static" CSC model used to describe tumor heterogeneity has been challenged by the evidence of CSC dynamic nature and plasticity. A comprehensive understanding of the mechanisms underlying this plasticity, and the capacity to unambiguously identify cancer markers to precisely target CSCs are crucial aspects for advancing cancer research and introducing more effective treatment strategies. In this context, Raman spectroscopy (RS) and specific Raman schemes, including CARS, SRS, SERS, have emerged as innovative tools for molecular analyses both in vitro and in vivo. In fact, these techniques have demonstrated considerable potential in the field of cancer detection, as well as in intraoperative settings, thanks to their label-free nature and minimal invasiveness. However, the RS integration in pre-clinical and clinical applications, particularly in the CSC field, remains limited. This review provides a concise overview of the historical development of RS and its advantages. Then, after introducing the CSC features and the challenges in targeting them with traditional methods, we review and discuss the current literature about the application of RS for revealing and characterizing CSCs and their inherent plasticity, including a brief paragraph about the integration of artificial intelligence with RS. By providing the possibility to better characterize the cellular diversity in their microenvironment, RS could revolutionize current diagnostic and therapeutic approaches, enabling early identification of CSCs and facilitating the development of personalized treatment strategies.

过去二十年来,研究越来越多地关注癌症干细胞(CSCs),认为它们是肿瘤形成、抗药性和复发的罪魁祸首。用于描述肿瘤异质性的传统 "静态 "癌干细胞模型受到了癌干细胞动态性质和可塑性证据的挑战。全面了解这种可塑性的内在机制以及明确识别癌症标志物以精确靶向 CSCs 的能力,对于推进癌症研究和引入更有效的治疗策略至关重要。在此背景下,拉曼光谱(RS)和特定拉曼方案(包括 CARS、SRS 和 SERS)已成为体外和体内分子分析的创新工具。事实上,这些技术已经在癌症检测领域以及术中环境中显示出相当大的潜力,这要归功于它们的无标记性和微创性。然而,RS 在临床前和临床应用中的整合仍然有限,尤其是在造血干细胞领域。本综述简要概述了 RS 的历史发展及其优势。然后,在介绍了造血干细胞的特征以及用传统方法靶向造血干细胞所面临的挑战之后,我们回顾并讨论了目前有关应用 RS 揭示和表征造血干细胞及其固有可塑性的文献,包括一段有关人工智能与 RS 整合的简短介绍。通过更好地描述细胞微环境中的细胞多样性,RS 可以彻底改变目前的诊断和治疗方法,实现 CSCs 的早期识别,促进个性化治疗策略的开发。
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引用次数: 0
Extracellular microvesicles/exosomes - magic bullets in horizontal transfer between cells of mitochondria and molecules regulating mitochondria activity.
IF 4 2区 医学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-02-14 DOI: 10.1093/stmcls/sxae086
Mariusz Z Ratajczak, Kannathasan Thetchinamoorthy, Diana Wierzbicka, Adrian Konopko, Janina Ratajczak, Magdalena Kucia

Extracellular microvesicles (ExMVs) were one of the first communication platforms between cells that emerged early in evolution. Evidence indicates that all types of cells secrete these small circular structures surrounded by a lipid membrane that plays an important role in cellular physiology and some pathological processes. ExMVs interact with target cells and may stimulate them by ligands expressed on their surface and/or transfer to the target cells their cargo comprising various RNA species, proteins, bioactive lipids, and signaling nucleotides. These small vesicles can also hijack some organelles from the cells and, in particular, transfer mitochondria, which are currently the focus of scientific interest for their potential application in clinical settings. Different mechanisms exist for transferring mitochondria between cells, including their encapsulation in ExMVs or their uptake in a "naked" form. It has also been demonstrated that mitochondria transfer may involve direct cell-cell connections by signaling nanotubules. In addition, evidence accumulated that ExMVs could be enriched for regulatory molecules, including some miRNA species and proteins that regulate the function of mitochondria in the target cells. Recently, a new beneficial effect of mitochondrial transfer has been reported based on inducing the mitophagy process, removing damaged mitochondria in the recipient cells to improve their energetic state. Based on this novel role of ExMVs in powering the energetic state of target cells, we present a current point of view on this topic and review some selected most recent discoveries and recently published most relevant papers.

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引用次数: 0
Enrichment of spermatogonial stem cells and staging of the testis cycle in a dasyurid marsupial, the fat-tailed dunnart.
IF 4 2区 医学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-02-13 DOI: 10.1093/stmcls/sxaf007
Gerard A Tarulli, Patrick R S Tatt, Rhys Howlett, Sara Ord, Stephen R Frankenberg, Andrew J Pask

There is increasing interest in use of marsupial models in research, for use in next-generation conservation by improving fitness through genetic modification, and in de-extinction efforts. Specifically this includes dasyurid marsupials such as the Thylacine, Tasmanian devil, quolls and the small rodent-like dunnarts. Technologies for generating genetically modified Australian marsupials remains to be established. Given the need to advance research in this space, the fat-tailed dunnart (Sminthopsis crassicaudata) is being established as a model for marsupial spermatogonial stem cell isolation, modification and testicular transplantation. This species is small (60-90mm body size), polyovulatory (8-12 pups per birth), and can breed in standard rodent facilities when housed in a 12:12 light cycle. To develop the fat tailed dunnart as a model for next-generation marsupial conservation, this study aimed to enrich dunnart spermatogonial stem cells from whole testis digestions using a fluorescent dye technology and fluorescence-activated cell sorting. This approach is not dependent on antibodies or genetic reporter animals that are limiting factors when performing cell sorting on species separated from human and mouse by large evolutionary timescales. This study also assessed development of spermatogonia and spermatogenesis in the fat-tailed dunnart, by making the first definition of the cycle of the seminiferous epithelium in any dasyurid. Overall, this is the first detailed study to assess the cycle of dasyurid spermatogenesis and provides a valuable method to enrich marsupial spermatogonial stem cells for cellular, functional and molecular analysis.

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引用次数: 0
Harnessing the diversity and potential of endogenous skeletal stem cells for musculoskeletal tissue regeneration.
IF 4 2区 医学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-02-13 DOI: 10.1093/stmcls/sxaf006
Kelly C Weldon, Michael T Longaker, Thomas H Ambrosi

In our aging society, the degeneration of the musculoskeletal system and adjacent tissues is a growing orthopedic concern. As bones age, they become more fragile, increasing the risk of fractures and injuries. Furthermore, tissues like cartilage accumulate damage, leading to widespread joint issues. Compounding this, the regenerative capacity of these tissues declines with age, exacerbating the consequences of fractures and cartilage deterioration. With rising demand for fracture and cartilage repair, bone-derived stem cells have attracted significant research interest. However, the therapeutic use of stem cells has produced inconsistent results, largely due to ongoing debates and uncertainties regarding the precise identity of the stem cells responsible for musculoskeletal growth, maintenance and repair. This review focuses on the potential to leverage endogenous skeletal stem cells (SSCs)-a well-defined population of stem cells with specific markers, reliable isolation techniques, and functional properties-in bone repair and cartilage regeneration. Understanding SSC behavior in response to injury, including their activation to a functional state, could provide insights into improving treatment outcomes. Techniques like microfracture surgery, which aim to stimulate SSC activity for cartilage repair, are of particular interest. Here, we explore the latest advances in how such interventions may modulate SSC function to enhance bone healing and cartilage regeneration.

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引用次数: 0
The miR-290 and miR-302 clusters are essential for reprogramming of fibroblasts to induced pluripotent stem cells.
IF 4 2区 医学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-02-12 DOI: 10.1093/stmcls/sxae080
Julia Ye, Ryan M Boileau, Ronald J Parchem, Robert L Judson-Torres, Robert Blelloch

The miR-290 and miR-302 clusters of microRNAs are highly expressed in naïve and primed pluripotent stem cells, respectively. Ectopic expression of the embryonic stem cell (ESC)-specific cell cycle regulating family of microRNAs arising from these two clusters dramatically enhances the reprogramming of both mouse and human somatic cells to induced pluripotency. Here, we used genetic knockouts to dissect the requirement for the miR-290 and miR-302 clusters during the reprogramming of mouse fibroblasts into induced pluripotent stem cells (iPSCs) with retrovirally introduced Oct4, Sox2, and Klf4. Knockout of either cluster alone did not negatively impact the efficiency of reprogramming. Resulting cells appeared identical to their ESC microRNA cluster knockout counterparts. In contrast, the combined loss of both clusters blocked the formation of iPSCs. While rare double knockout clones could be isolated, they showed a dramatically reduced proliferation rate, a persistent inability to fully silence the exogenously introduced pluripotency factors, and a transcriptome distinct from individual miR-290 or miR-302 mutant ESC and iPSCs. Taken together, our data show that miR-290 and miR-302 are essential yet interchangeable in reprogramming to the induced pluripotent state.

{"title":"The miR-290 and miR-302 clusters are essential for reprogramming of fibroblasts to induced pluripotent stem cells.","authors":"Julia Ye, Ryan M Boileau, Ronald J Parchem, Robert L Judson-Torres, Robert Blelloch","doi":"10.1093/stmcls/sxae080","DOIUrl":"https://doi.org/10.1093/stmcls/sxae080","url":null,"abstract":"<p><p>The miR-290 and miR-302 clusters of microRNAs are highly expressed in naïve and primed pluripotent stem cells, respectively. Ectopic expression of the embryonic stem cell (ESC)-specific cell cycle regulating family of microRNAs arising from these two clusters dramatically enhances the reprogramming of both mouse and human somatic cells to induced pluripotency. Here, we used genetic knockouts to dissect the requirement for the miR-290 and miR-302 clusters during the reprogramming of mouse fibroblasts into induced pluripotent stem cells (iPSCs) with retrovirally introduced Oct4, Sox2, and Klf4. Knockout of either cluster alone did not negatively impact the efficiency of reprogramming. Resulting cells appeared identical to their ESC microRNA cluster knockout counterparts. In contrast, the combined loss of both clusters blocked the formation of iPSCs. While rare double knockout clones could be isolated, they showed a dramatically reduced proliferation rate, a persistent inability to fully silence the exogenously introduced pluripotency factors, and a transcriptome distinct from individual miR-290 or miR-302 mutant ESC and iPSCs. Taken together, our data show that miR-290 and miR-302 are essential yet interchangeable in reprogramming to the induced pluripotent state.</p>","PeriodicalId":231,"journal":{"name":"STEM CELLS","volume":"43 2","pages":""},"PeriodicalIF":4.0,"publicationDate":"2025-02-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143555500","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Exosomes released from immature neurons regulate adult neural stem cell differentiation through microRNA-7a-5p. 未成熟神经元释放的外泌体通过microRNA-7a-5p调控成体神经干细胞的分化。
IF 4 2区 医学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-02-12 DOI: 10.1093/stmcls/sxae082
Xiujian Sun, Yexiang Chen, Ying Zhang, Tiantian Cheng, Huisheng Peng, Yanting Sun, Jing-Gen Liu, Chi Xu

Exosomes in the hippocampal dentate gyrus are essential for modulating the cell signaling and controlling the neural differentiation of hippocampal neural stem cells (NSCs), which may determine the level of hippocampal adult neurogenesis. In the present study, we found that exosomes secreted by immature neurons may promote the neuronal differentiation of mouse NSCs in vitro. By miRNA sequencing, we discovered that miR-7a-5p was significantly lower in exosomes from differentiated immature neurons than those from undifferentiated NSCs. By modulating the level of miR-7a-5p, the mimic and inhibitor of miR-7a-5p could either inhibit or promote the neuronal differentiation of NSCs, respectively. Moreover, we confirmed that miR-7a-5p affected neurogenesis by directly targeting Tcf12, a transcription factor responsible for the differentiation of NSCs. The siRNA of Tcf12 inhibited neuronal differentiation of NSCs, while overexpression of Tcf12 promoted NSC differentiation. Thus, we conclude that the miR-7a-5p content in neural exosomes is essential to the fate determination of adult hippocampal neurogenesis and that miR-7a-5p directly targets Tcf12 to regulate adult hippocampal neurogenesis.

海马齿状回(DG)外泌体对控制海马神经干细胞(NSCs)神经分化的细胞信号调节至关重要,这可能决定海马成体神经发生的水平。在本研究中,我们发现未成熟神经元分泌的外泌体可能在体外促进小鼠NSCs的神经元分化。通过miRNA测序,我们发现分化的未成熟神经元外泌体中的miR-7a-5p明显低于未分化的NSCs。通过调节miR-7a-5p的水平,miR-7a-5p的模拟物和抑制剂可以分别抑制或促进NSCs的神经元分化。此外,我们证实miR-7a-5p通过直接靶向Tcf12(一种负责NSCs分化的转录因子)影响神经发生。Tcf12的siRNA抑制NSCs的神经元分化,而过表达Tcf12则促进NSCs的分化。因此,我们得出结论,神经外泌体中miR-7a-5p的含量对成人海马神经发生的命运决定至关重要,miR-7a-5p直接靶向Tcf12调节成人海马神经发生。
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引用次数: 0
Therapeutic potential of stem cell-derived extracellular vesicles in neurodegenerative diseases associated with cognitive decline. 干细胞源性细胞外囊泡在与认知能力下降相关的神经退行性疾病中的治疗潜力。
IF 4 2区 医学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-02-12 DOI: 10.1093/stmcls/sxae074
Matteo Spinelli, Salvatore Fusco, Claudio Grassi

In the central nervous system, cell-to-cell interaction is essential for brain plassticity and repair, and its alteration is critically involved in the development of neurodegenerative diseases. Neural stem cells are a plentiful source of biological signals promoting neuroplasticity and the maintenance of cognitive functions. Extracellular vesicles (EVs) represent an additional strategy for cells to release signals in the surrounding cellular environment or to exchange information among both neighboring and distant cells. In the last years, rising attention has been devoted to the ability of stem cell (SC)-derived EVs to counteract inflammatory and degenerative brain disorders taking advantage of their immunomodulatory capacities and regenerative potential. Here, we review the role of adult neurogenesis impairment in the cognitive decline associated with neurodegenerative diseases and describe the beneficial effects of SC-derived EVs on brain plasticity and repair also discussing the advantages of SC-derived EV administration vs SC transplantation in the treatment of neurodegenerative disorders.

在中枢神经系统中,细胞与细胞之间的相互作用对大脑的可塑性和修复至关重要,其改变与神经退行性疾病的发展密切相关。神经干细胞是促进神经可塑性和维持认知功能的生物信号的丰富来源。细胞外囊泡(EVs)是细胞在周围细胞环境中释放信号或在邻近细胞和远处细胞之间交换信息的另一种策略。最近几年,人们越来越关注干细胞(SC)衍生的EVs利用其免疫调节能力和再生潜力对抗炎症性和退行性脑疾病的能力。在此,我们回顾了成人神经发生障碍在与神经退行性疾病相关的认知能力下降中的作用,描述了干细胞衍生的EV对大脑可塑性和修复的有益影响,并讨论了干细胞衍生的EV给药与干细胞移植在治疗神经退行性疾病中的优势。
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引用次数: 0
Notch inhibition enhances morphological reprogramming of microRNA-induced human neurons. 抑制 Notch 可增强 microRNA 诱导的人类神经元的形态重编程。
IF 4 2区 医学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-02-12 DOI: 10.1093/stmcls/sxae079
Kyle F Burbach, Shanyun Wu, Andrew S Yoo

The role of Notch signaling in direct neuronal reprogramming remains unknown despite its importance to brain development in vivo. Here, we use microRNA-induced neurons that are directly reprogrammed from human fibroblasts to determine how Notch signaling contributes to neuronal identity. We found that Notch inhibition during the first week of reprogramming was both necessary and sufficient to enhance neurite outgrowth at a later timepoint, indicating an important role in the erasure of the original cell identity. Accordingly, transcriptomic analysis showed that the effect of Notch inhibition was likely due to improvements in fibroblast fate erasure and silencing of non-neuronal genes. To this effect, we identify MYLIP, whose downregulation in response to Notch inhibition significantly promoted neurite outgrowth. Moreover, Notch inhibition resulted in cells with neuronal transcriptome signatures defined by expressing long genes at a faster rate than the control, demonstrating the effect of accelerated fate erasure on neuronal fate acquisition. Our results demonstrate the antagonistic role of Notch signaling to the pro-neuronal microRNAs 9 and 124 and the benefits of its inhibition to the acquisition of neuronal morphology.

Notch 信号在神经元直接重编程中的作用仍然未知,尽管它对体内大脑发育非常重要。在这里,我们利用从人类成纤维细胞直接重编程的microRNA诱导的神经元来确定Notch信号是如何促进神经元特性的。我们发现,在重编程的第一周抑制Notch是必要的,而且足以增强后期时间点的神经元生长,这表明Notch在消除原始细胞身份方面发挥着重要作用。因此,转录组分析表明,Notch抑制的效果可能是由于成纤维细胞命运清除和非神经元基因沉默的改善。为此,我们确定了 MYLIP,其对 Notch 抑制的下调显著促进了神经元的生长。此外,Notch抑制导致细胞具有神经元转录组特征,即表达长基因的速度快于对照组,这证明了加速命运清除对神经元命运获得的影响。我们的研究结果证明了Notch信号传导对神经元microRNA 9和124的拮抗作用,以及抑制Notch信号传导对神经元形态获得的益处。
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引用次数: 0
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