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Suppression of Krüppel-like factor 5 basal expression by CREB1 binding to far distal element. CREB1结合远端元件抑制kr<s:1> ppel样因子5基础表达。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.3233/TUB-230017
Nozomi Mihara, Kazushi Imai

Background: Krüppel-like factor 5 (KLF5) is a transcription factor regulating the proliferation and differentiation of epithelial cells, and its uncontrolled expression is closely associated with carcinoma progression. Sp3 binding to the minimal essential region (MER) of KLF5 gene is critical for KLF5 basal expression, but the expression control mechanism is unknown.

Objective: This study aimed to identify a regulatory region for KLF5 basal expression and the binding protein in carcinoma cells by analyzing the promoter upstream region.

Methods: Reporter assays determined the silencer region. The protein binding to the region was identified by database analysis and ChIP assay. The protein mediating the interaction between the region and the MER was confirmed through chromosome conformation capture (3 C) on ChIP assay. The effects of the protein on KLF5 expression were analyzed using qRT-PCR and western blot.

Results: Reporter assay localized the 425-region from upstream KLF5 gene as the silencer. Database analysis and ChIP assay found CREB1 binding to the 425-region. CREB1 siRNA or mutation of CREB1-binding site in the 425-region increased luciferase activities and decreased the binding to 425-region. 3 C on ChIP assay showed that CREB1 mediated interaction of the 425-region and the MER. CREB1 overexpression decreased endogenous KLF5 expression and luciferase activity.

Conclusions: The 425-region is the silencer of KLF5 basal expression, and CREB1 binding suppresses the expression.

背景:kr ppel样因子5 (KLF5)是调节上皮细胞增殖和分化的转录因子,其不受控制的表达与肿瘤进展密切相关。Sp3结合到KLF5基因的最小必需区(minimum essential region, MER)对KLF5的基础表达至关重要,但其表达调控机制尚不清楚。目的:本研究旨在通过分析KLF5上游启动子区,寻找癌细胞中KLF5基础表达及其结合蛋白的调控区域。方法:采用报告法测定消音区。通过数据库分析和ChIP实验鉴定了与该区域结合的蛋白。通过芯片上的染色体构象捕获(3c)证实了介导该区域与MER相互作用的蛋白质。采用qRT-PCR和western blot分析该蛋白对KLF5表达的影响。结果:报告者实验定位了上游KLF5基因425区为消声器。数据库分析和ChIP检测发现CREB1与425区结合。CREB1 siRNA或425区CREB1结合位点突变增加荧光素酶活性,降低与425区的结合。ChIP上的3c实验显示CREB1介导425区与MER的相互作用。CREB1过表达降低内源性KLF5表达和荧光素酶活性。结论:425区是KLF5基础表达的沉默者,CREB1结合抑制KLF5基础表达。
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引用次数: 0
Keynote Lectures' Abstracts. 主题演讲摘要。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.3233/TUB-239002
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引用次数: 0
Small-interfering RNA targeting proprotein convertase subtilisin/kexin type 9 might promote fatty liver disease and hepatocellular carcinoma through upregulation of CD36. 靶向蛋白转化酶subtilisin/ keexin type 9的小干扰RNA可能通过上调CD36介导脂肪肝和肝细胞癌的发生。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.3233/TUB-230007
Frank S Fan

Proprotein convertase subtilisin/kexin type 9 (PCSK9) binds to low-density lipoprotein (LDL) receptor and fatty acid translocase CD36, inducing lysosomal degradation of these two receptors in the liver cells. Both monoclonal antibody (mAb) and small-interfering RNA (siRNA) targeting PCSK9 have been designed for treatment of familial hypercholesterolemia recently, with elevating LDL receptors on the liver cell surface and increasing LDL uptake as the main beneficial mechanism. However, given that the binding domains of PCSK9 for LDL receptor and CD36 are different, and PCSK9 mAb only attacks the domain for LDL receptor, CD36 expression remains partially controlled under PCSK9 mAb treatment. In contrast, PCSK9 siRNA brings on complete loss of PCSK9, resulting in overexpression of CD36. Based on the fact that CD36 is a key factor in the pathogenesis of non-alcoholic fatty liver disease (NAFLD) and subsequent hepatocellular carcinoma (HCC), the risk of developing NAFLD and HCC on long-term use of PCSK9 siRNA is thus raised as a hypothesis. Additionally, because CD36 is also involved in the promotion of malignant diseases other than HCC, such as acute myeloid leukemia, gastric cancer, breast cancer, and colorectal cancer, the speculative danger of flourishing these malignancies by PCSK9 siRNA is discussed as well.

蛋白转化酶枯草杆菌素/酮素9型(PCSK9)结合低密度脂蛋白(LDL)受体和脂肪酸转位酶CD36,诱导肝细胞中这两种受体的溶酶体降解。最近,针对PCSK9的单克隆抗体(mAb)和小干扰RNA (siRNA)被设计用于治疗家族性高胆固醇血症,其主要有益机制是提高肝细胞表面LDL受体和增加LDL摄取。然而,由于PCSK9对LDL受体和CD36的结合域不同,且PCSK9单抗仅攻击LDL受体的结合域,因此在PCSK9单抗处理下,CD36的表达仍部分受到控制。而PCSK9 siRNA导致PCSK9完全缺失,导致CD36过表达。基于CD36是非酒精性脂肪性肝病(NAFLD)及随后的肝细胞癌(HCC)发病的关键因素这一事实,因此,长期使用PCSK9 siRNA有发生NAFLD和HCC的风险被提出作为一种假设。此外,由于CD36还参与促进HCC以外的恶性疾病,如急性髓系白血病、胃癌、乳腺癌和结直肠癌,因此也讨论了PCSK9 siRNA对这些恶性肿瘤的增殖的推测危险。
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引用次数: 0
Induction of epithelial-mesenchymal transition in thyroid follicular cells is associated with cell adhesion alterations and low-dose hyper-radiosensitivity. 甲状腺滤泡细胞上皮-间质转化的诱导与细胞粘附改变和低剂量超辐射敏感性有关。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.3233/TUB-220027
Ankit Mathur, Vijayakumar Chinnadurai, Param Jit Singh Bhalla, Sudhir Chandna

Background: Epithelial-mesenchymal transition (EMT) is associated with altered cellular adhesion. We previously demonstrated that cellular adhesion influences Low-dose Hyper-Radiosensitivity (HRS) in a variety of tumor cells. However, the relationship of low-dose HRS with the phenotypic plasticity incurred by EMT during the neoplastic transformation remains to be elucidated.

Objective: To investigate whether acquisition of EMT phenotype during progressive neoplastic transformation may affect low-dose radiation sensitivity.

Methods: Primary thyroid cells obtained from a human cystic thyroid nodule were first subjected to nutritional stress. This yielded immortalized INM-Thy1 cell strain, which was further treated with either multiple γ-radiation fractions (1.5 Gy each) or repetitive cycles of 3-methylcholanthrene and phorbol-12-myristate-13-acetate, yielding two progressive transformants, viz., INM-Thy1R and INM-Thy1C. Morphological alterations, chromosomal double-minutes, cell adhesion proteins, anchorage dependency, tumorigenicity in nude mice and cellular radiosensitivity were studied in these strains.

Results: Both transformants (INM-Thy1R, INM-Thy1C) displayed progressive tumorigenic features, viz., soft agar colony growth and solid tumor growth in nude mice, coupled with features of epithelial-mesenchymal transition and activated Wnt pathway. Incidentally, the chemical-induced transformant (INM-Thy1C) displayed a prominent HRS (αs/αr = 29.35) which remained unaffected at high cell density. However, the parental (INM-Thy1) cell line as well as radiation-induced transformant (INM-Thy1R) failed to show this hypersensitivity.

Conclusion: The study shows that induction of EMT in thyroid follicular cells may accompany increased susceptibility to low-dose ionizing radiation, which was attenuated by adaptive resistance acquired during radiation-induced transformation.

背景:上皮-间充质转化(EMT)与细胞粘附的改变有关。我们之前已经证明,细胞粘附会影响各种肿瘤细胞的低剂量超辐射敏感性(HRS)。然而,低剂量HRS与EMT在肿瘤转化过程中引起的表型可塑性的关系仍有待阐明。目的:探讨在进行性肿瘤转化过程中获得EMT表型是否会影响低剂量辐射敏感性。方法:首先对从人类囊性甲状腺结节中获得的原代甲状腺细胞进行营养应激。这产生了永生化的INM-Thy1细胞株,该细胞株用多种γ-辐射组分(1.5 Gy)或3-甲基胆蒽和佛波醇-12-嘧啶酸酯-13-乙酸酯的重复循环,产生两个渐进转化体,即INM-Thy1R和INM-Thy1C。对这些菌株的形态学改变、染色体双分钟、细胞粘附蛋白、锚定依赖性、裸鼠致瘤性和细胞放射敏感性进行了研究。结果:两个转化体(INM-Thy1R、INM-Thy1C)均表现出进行性致瘤特征,即在裸鼠体内软琼脂集落生长和实体瘤生长,并伴有上皮-间充质转化和激活Wnt途径的特征。顺便说一句,化学诱导的转化体(INM-Thy1C)显示出显著的HRS(αs/αr=29.35),在高细胞密度下不受影响。然而,亲代(INM-Thy1)细胞系以及辐射诱导的转化体(INM-Thy1R)未能表现出这种超敏反应。结论:研究表明,EMT在甲状腺滤泡细胞中的诱导可能伴随着对低剂量电离辐射的易感性增加,而在辐射诱导的转化过程中获得的适应性抗性减弱了这种易感性。
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引用次数: 0
Patterns of mutations in nine cancer-related genes and PAF development among smoking male patients diagnosed with bladder cancer. 诊断为膀胱癌的吸烟男性患者中9种癌症相关基因的突变模式和PAF的发展
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.3233/TUB-220032
Eman Alshehri, Amal M Al-Dogmi, Tahani Mohamed Ibrahim Al-Hazani, Maha Abdulla Alwaili, Fatmah Ahmed Safhi, Lina Mohammed Alneghery, Areej Saud Jalal, Ibtesam Sanad Alanazi, Fatima Abdullah AlQassim, Mashael Alhumaidi Alotaibi, Wedad Saeed Al-Qahtani

Background: Smoking is one of the most popular risk factors provoking bladder cancer (BC). This research intended to estimate cigarette smoking effect involving PAF signs between smoking patients with BC and non-smoking patients with same diagnosis to define relations with pathological characteristics and their prognosis on zero-relapse and disease-associated recovery.

Methods: Two groups of smokers (n = 54) and non-smokers (n = 62) were selected. Both cohorts of patients had BC. They were evaluated utilizing NGS on 9 cancer-related genes and confirmed through the Sanger DNA sequencing and histopathological tests based on H&E staining. The factor of smoking and impact of PAF development by ELISA assay and PAF-R manifestation in terms of immunochemical evaluation on BC areas comparing to a control group (n = 30) was examined involving healthy contributors, including the use of well-designed statistical trials.

Results: The multivariate evaluation showed considerable rise in mutation patterns related to smoking among BC patients (group 3), increase in PAF development (***P<0.001) and vivid signs of PAF-R contrasted to non-smokers with BC (group 2) and control group (group 1). All the identified biological changes (gains/losses) were recorded at the same locations in both groups. Patients from group 3 held 3-4 various mutations, while patients from group 2 held 1-3 various mutations. Mutations were not identified in 30 respondents from control group. The most repeated mutations were identified in 3 of 9 examined genes, namely TP53, PIK3CA and PTEN, with highest rates of increase in Group 3. Moreover, histopathological tests revealed barely identifiable and abnormal traits in BC tissues, i.e. were without essential histopathological changes between groups 2 and 3.

Conclusion: Smoking of cigarettes provokes PAF development due to urothelial inflammation and rise of mutations in 9 cancer-related genes. These are indicative factors of inducing BC.

背景:吸烟是引起膀胱癌(BC)最常见的危险因素之一。本研究旨在评估吸烟合并BC患者与非吸烟患者在相同诊断的情况下吸烟对PAF体征的影响,以确定其病理特征及其零复发和疾病相关康复预后的关系。方法:选择吸烟者(n = 54)和非吸烟者(n = 62)两组。两组患者均患有BC。利用NGS对9个癌症相关基因进行评估,并通过Sanger DNA测序和基于H&E染色的组织病理学检查进行确认。通过ELISA检测吸烟因素和PAF发展的影响,以及与对照组(n = 30)相比,在BC区域的免疫化学评价中PAF- r的表现,包括使用精心设计的统计试验。结果:多因素评估显示,BC患者中吸烟相关的突变模式显著增加(第3组),PAF发展增加(*** p)。结论:吸烟引起尿路上皮炎症和9种癌症相关基因突变增加,从而引发PAF发展。这些都是诱发BC的指示性因素。
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引用次数: 0
Oral Presentations' Abstracts. 口头报告的摘要。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.3233/TUB-239003
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引用次数: 0
Medium and large alleles of the PGC gene are risk factors for gastric cancer. PGC基因中、大等位基因是胃癌发生的危险因素。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.3233/TUB-220025
Josefina Yoaly Sánchez-López, Katia Carolina Vázquez-Ibarra, Andrea Marlene García-Muro, Azaria García-Ruvalcaba, Sergio Pacheco-Sotelo, Luis Carlos Díaz-Herrera, Marıa Eugenia Marin-Contreras

Background: A 100-bp insertion/deletion polymorphism in the pepsinogen C gene has been associated with the risk of gastric cancer (GC).

Objective: We analyzed the relationships of the 100-bp insertion/deletion polymorphism with GC, atrophic gastritis (AG), and intestinal metaplasia (IM) in the Mexican general population (MGP).

Methods: We studied the genomic DNA of subjects with GC n = 80, AG and IM n = 60, controls n = 110, and the MGP n = 97. PGC gene insertion/deletion polymorphism was identified by means of PCR, capillary electrophoresis and GeneScan software.

Results: Different allele sizes of PGC polymorphism were observed in the studied groups, from 266 bp to 499 bp, which were grouped for the analysis as short alleles of 266-399 bp, medium alleles of 400-433 bp and large alleles of 434-499 bp. Carriers of one or two medium alleles, had an increased risk of GC, with OR of 1.99 (CI95% 1.08-3.67 p = 0.026) compared to homozygotes (no medium/no medium).

Conclusions: Previous studies have related PGC short alleles to risk for or protection against GC depending on the ethnic origin of the population. In our study, medium alleles were related to risk for GC. Further studies are required to establish the importance of this polymorphism in the origin of gastric neoplasia.

背景:胃蛋白酶原C基因的100 bp插入/缺失多态性与胃癌(GC)的风险相关。目的:分析墨西哥普通人群(MGP)中100bp插入/缺失多态性与胃癌、萎缩性胃炎(AG)和肠化生(IM)的关系。方法:研究GC = 80, AG和IM = 60,对照组= 110,MGP = 97的基因组DNA。采用PCR、毛细管电泳和GeneScan软件对PGC基因的插入/缺失多态性进行鉴定。结果:各组PGC多态性等位基因大小在266 ~ 499 bp之间,分为266 ~ 399 bp的短等位基因、400 ~ 433 bp的中等位基因和434 ~ 499 bp的大等位基因。与纯合子(无培养基/无培养基)相比,携带一个或两个中等等位基因的人患胃癌的风险增加,or为1.99 (CI95% 1.08-3.67 p = 0.026)。结论:先前的研究已经将PGC短等位基因与胃癌的风险或预防联系起来,这取决于人群的种族起源。在我们的研究中,中等等位基因与胃癌风险相关。需要进一步的研究来确定这种多态性在胃肿瘤起源中的重要性。
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引用次数: 0
Poster Presentations' Abstracts. 海报展示的摘要。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.3233/TUB-239004
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引用次数: 0
A statement regarding the mass retraction of Iranian papers in November 2016. 关于2016年11月伊朗报纸被大规模撤稿的声明。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.3233/TUB-220031
Aram Mokarizadeh
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引用次数: 0
Book of Abstracts. 摘要之书。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.3233/TUB-239001
{"title":"Book of Abstracts.","authors":"","doi":"10.3233/TUB-239001","DOIUrl":"10.3233/TUB-239001","url":null,"abstract":"","PeriodicalId":23364,"journal":{"name":"Tumor Biology","volume":"45 s1","pages":"S1-S3"},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11796434/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10861008","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Tumor Biology
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