Pub Date : 2020-10-10DOI: 10.2116/xraystruct.36.39
M. Handa, H. Ishida, D. Yoshioka, Fumiaki Kugita, I. Hiromitsu, K. Kasuga, M. Mikuriya
The title compound of a lantern-type ruthenium(II,III) dinuclear complex, [Ru 2 (O 2 CCMe 3 ) 4 (NCS)(DMF)], was isolated and the crystal structure was determined by the single-crystal X-ray diffraction method at 293 K. It crystallizes in the monoclinc space group P 2 1 /n with a = 11.549(6)Å, b = 9.849(5)Å, c = 14.250(8)Å, β = 91.898(7) ° , V = 1619.9(15)Å 3 , D x = 1.513 g/cm 3 , and Z = 2. The R 1 [ I > 2 σ ( I )] and wR 2 (all data) values are 0.0389 and 0.0916, respectively, for all 3860 independent reflections. The axial sites of the dinuclear core are occupied by NCS – and DMF ligands with distances of Ru–N ax (NCS – ) = 2.29(3)Å and Ru–O ax (DMF) = 2.201(19)Å, respectively. The Ru–Ru distance is 2.2713(10)Å, of which the value is in the range of those for the other lantern-type diruthenium(II,III) tetracarboxylate complexes.
{"title":"Crystal Structure of a Lantern-type Diruthenium(II,III) Complex with Axial Thiocyanato and DMF Ligands, [Ru2(O2CCMe3)4(NCS)(DMF)]","authors":"M. Handa, H. Ishida, D. Yoshioka, Fumiaki Kugita, I. Hiromitsu, K. Kasuga, M. Mikuriya","doi":"10.2116/xraystruct.36.39","DOIUrl":"https://doi.org/10.2116/xraystruct.36.39","url":null,"abstract":"The title compound of a lantern-type ruthenium(II,III) dinuclear complex, [Ru 2 (O 2 CCMe 3 ) 4 (NCS)(DMF)], was isolated and the crystal structure was determined by the single-crystal X-ray diffraction method at 293 K. It crystallizes in the monoclinc space group P 2 1 /n with a = 11.549(6)Å, b = 9.849(5)Å, c = 14.250(8)Å, β = 91.898(7) ° , V = 1619.9(15)Å 3 , D x = 1.513 g/cm 3 , and Z = 2. The R 1 [ I > 2 σ ( I )] and wR 2 (all data) values are 0.0389 and 0.0916, respectively, for all 3860 independent reflections. The axial sites of the dinuclear core are occupied by NCS – and DMF ligands with distances of Ru–N ax (NCS – ) = 2.29(3)Å and Ru–O ax (DMF) = 2.201(19)Å, respectively. The Ru–Ru distance is 2.2713(10)Å, of which the value is in the range of those for the other lantern-type diruthenium(II,III) tetracarboxylate complexes.","PeriodicalId":23922,"journal":{"name":"X-ray Structure Analysis Online","volume":" ","pages":""},"PeriodicalIF":0.2,"publicationDate":"2020-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"48226664","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2020-09-10DOI: 10.2116/xraystruct.36.35
A. Hossain, K. Hirabayashi, T. Nishinaga, Toshio Shimizu, K. Sugiura
The molecular structure of sterically crowded 1,4,5,8-tetrabromonaphthalene 1 was refined. The compound crystallized in a monoclinic system and was characterized as follows: P 2 1 / c , a = 9.470(3), b = 15.530(4), c = 7.340(2)Å, β = 92.147(9) ° , Z = 4, V = 1078.7(5)Å 3 . The crystal structure was solved by direct methods and refined by full-matrix least-squares on
改进了空间拥挤的1,4,5,8-四溴-萘1的分子结构。该化合物在单斜晶系中结晶,表征如下:P 21 / c, a = 9.470(3), b = 15.530(4), c = 7.340(2)Å, β = 92.147(9)°,Z = 4, V = 1078.7(5)Å 3。用直接法求解晶体结构,并用全矩阵最小二乘法对其进行细化
{"title":"Crystal Structure Refinement of 1,4,5,8-Tetrabromonaphthalene: A Twisted Chiral Naphthalene Induced by Steric Repulsion","authors":"A. Hossain, K. Hirabayashi, T. Nishinaga, Toshio Shimizu, K. Sugiura","doi":"10.2116/xraystruct.36.35","DOIUrl":"https://doi.org/10.2116/xraystruct.36.35","url":null,"abstract":"The molecular structure of sterically crowded 1,4,5,8-tetrabromonaphthalene 1 was refined. The compound crystallized in a monoclinic system and was characterized as follows: P 2 1 / c , a = 9.470(3), b = 15.530(4), c = 7.340(2)Å, β = 92.147(9) ° , Z = 4, V = 1078.7(5)Å 3 . The crystal structure was solved by direct methods and refined by full-matrix least-squares on","PeriodicalId":23922,"journal":{"name":"X-ray Structure Analysis Online","volume":" ","pages":""},"PeriodicalIF":0.2,"publicationDate":"2020-09-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43092073","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2020-09-10DOI: 10.2116/xraystruct.36.33
R. Mitsuhashi, M. Mikuriya
The crystal data are included in Table 1. X-ray crystallographic data were collected on a Bruker smart APEX CCD diffractometer at 90(2)K. The integrated and scaled data were empirically corrected with SADABS. 5 The initial structure was solved by The crystal structure of the Ru(III) complex with 2-(2-imidazolinyl)phenolate was determined by X-ray crystallography. The title compound was synthesized by a reaction of RuCl 3 · n H 2 O and 2-(2-imidazolinyl)phenolate in ethanol. The compound crystallized in the monoclinic space group P 2 1 / c and Z = 4 with cell parameters a = 10.2053(18)Å, b = 33.277(6)Å, c = 8.8733(15)Å, β = 113.904(3) ° , V = 2754.9(8)Å 3 . The R 1 [ I > 2 σ ( I )] and wR 2 (all data) values are 0.0711 and 0.1487, respectively, for all 6316 independent reflections. The title compound was found to take a meridional configuration. In the crystal, a centrosymmetric dimer structure was formed by intermolecular hydrogen-bonds between the coordinating phenolate-O atom (O2) of a ligand and a noncoordinating N–H bond (N5–H5A) in the symmetry equivalent ligand.
{"title":"Synthesis and Crystal Structure of Tris[2-(2-imidazolinyl)phenolato]ruthenium(III)","authors":"R. Mitsuhashi, M. Mikuriya","doi":"10.2116/xraystruct.36.33","DOIUrl":"https://doi.org/10.2116/xraystruct.36.33","url":null,"abstract":"The crystal data are included in Table 1. X-ray crystallographic data were collected on a Bruker smart APEX CCD diffractometer at 90(2)K. The integrated and scaled data were empirically corrected with SADABS. 5 The initial structure was solved by The crystal structure of the Ru(III) complex with 2-(2-imidazolinyl)phenolate was determined by X-ray crystallography. The title compound was synthesized by a reaction of RuCl 3 · n H 2 O and 2-(2-imidazolinyl)phenolate in ethanol. The compound crystallized in the monoclinic space group P 2 1 / c and Z = 4 with cell parameters a = 10.2053(18)Å, b = 33.277(6)Å, c = 8.8733(15)Å, β = 113.904(3) ° , V = 2754.9(8)Å 3 . The R 1 [ I > 2 σ ( I )] and wR 2 (all data) values are 0.0711 and 0.1487, respectively, for all 6316 independent reflections. The title compound was found to take a meridional configuration. In the crystal, a centrosymmetric dimer structure was formed by intermolecular hydrogen-bonds between the coordinating phenolate-O atom (O2) of a ligand and a noncoordinating N–H bond (N5–H5A) in the symmetry equivalent ligand.","PeriodicalId":23922,"journal":{"name":"X-ray Structure Analysis Online","volume":" ","pages":""},"PeriodicalIF":0.2,"publicationDate":"2020-09-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43840575","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2020-08-10DOI: 10.2116/xraystruct.36.31
Haruki Sugiyama, H. Uekusa
The crystal structure of salt, 3 2 was determined by single crystal X-ray structural analysis. It was revealed: monoclinic, C 2/ c , a = 26.951(3), b =
{"title":"Crystal Structure and Chromic Properties of an Iron(II) Complex Salt of a N-Salicylideneaniline Derivative","authors":"Haruki Sugiyama, H. Uekusa","doi":"10.2116/xraystruct.36.31","DOIUrl":"https://doi.org/10.2116/xraystruct.36.31","url":null,"abstract":"The crystal structure of salt, 3 2 was determined by single crystal X-ray structural analysis. It was revealed: monoclinic, C 2/ c , a = 26.951(3), b =","PeriodicalId":23922,"journal":{"name":"X-ray Structure Analysis Online","volume":"1 1","pages":""},"PeriodicalIF":0.2,"publicationDate":"2020-08-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"42909662","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2020-07-10DOI: 10.2116/xraystruct.36.21
D. O’Shea, R. Sommer, M. Taniguchi, J. Lindsey
{"title":"Crystal Structure of 1,9-Dibromo-5-phenyldipyrrin, Tetrapyrrole Synthesis Derivative and Free Base Ligand of BODIPY Building Blocks","authors":"D. O’Shea, R. Sommer, M. Taniguchi, J. Lindsey","doi":"10.2116/xraystruct.36.21","DOIUrl":"https://doi.org/10.2116/xraystruct.36.21","url":null,"abstract":"","PeriodicalId":23922,"journal":{"name":"X-ray Structure Analysis Online","volume":"36 1","pages":"21-22"},"PeriodicalIF":0.2,"publicationDate":"2020-07-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49071262","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2020-05-10DOI: 10.2116/xraystruct.36.15
P. S. Resende, M. R. Couri, F. B. Miguel, A. Cuin
Knoevenagel condensation is widely the main method to obtain a carbon–carbon double-bond reacting aldehyde or ketone with organic acid compounds. The condensation between formaldehyde and diethyl malonate, in the presence of diethylamine, appears to be the 1st example of this reaction.1 Doebner modification, for instance, is used to synthesize α-, βunsaturated compounds with advantageous since the reaction can be performed at room temperature, tolerate a variety of functional groups, and avoid unnecessary reactions.2 Another modification of the Knoevenagel reaction is known as the Weiss–Cook reaction, which is an extremely versatile reaction used for the synthesis of a high number of natural products.3,4 The title compound (Fig. 1) was obtained by following the literature.3 Briefly, about 10.3 mL (0.1 mol) of acetylacetone was mixed with 13.3 mL of cinnamaldehyde (0.1 mol), and the mixture was stirred under an ice bath. After 2 h, only one drop of pyrrolidine was added to the reaction solution, and stirring at room temperature (25°C) continued for 10 min. The solution was washed 3 times with a mixture of 10 mL of a HCl aqueous solution (1.0 mol L–1) and 10 mL of CH2Cl2. The organic layer was concentrated, yielding a residue which was purified by column chromatography using n-hexane and ethyl-acetate as an eluent (95:5) to afford the product in solution. Light-yellow crystals were obtained by slow evaporation of the solvent. The yield was 72%, m.p.: 105 – 107o C. Anal. Calcd (%) for C14H14O2: C, 78.5; H, 6.59; Found (%): C, 78.3; H, 6.61. IR bands: νC=O, 1700 cm–1; νC=C + νCCaromatic at 1607, 1541 and 1345 cm–1; νC–O at 1198 cm–1. 1H NMR (500 MHz, DMSO-d6) δ (ppm): 2.34 (s, 3H, CH3) and 2.40 (s, 3H, CH3); 7.035 (dd, 1H, J = 13.5 Hz, –HC=CH–CH=); 7.49 (J = 11.4Hz, 1H, –HC=CH–CH=) and 7.32 (J = 15.4 Hz, 1H, –HC=CH–CH=); 7.61 (d, 2H, J = 7.2, Haromatic); 7.42 (m, 3H, Haromatic). 13C (125 MHz, DMSO-d6) δ (ppm) 203 and 198 (C=O); 145, 142.6 and 124 (–HC=CH–CH=); 142, 135, 128.3, 129.5 and 130.3 (Caromatic and Cnon-hydrogenated). UV-Vis: 332 nm (π-π* transition). The X-ray measurements were performed on an Enraf-Nonius Kappa-CCD diffractometer with graphite-monochromated Mo Kα (λ = 0.71073 Å) radiation. Diffraction data were collected (φ and ω scans with κ-offsets) with COLLECT.5 Integration, scaling and reduction of the diffraction intensities were performed with HKL DENZO-SCALEPACK6 suite of programs. The data were corrected empirically for absorption effects with the multi-scan method.7 The unit cell parameters were obtained by leastsquares refinement based on the angular settings for all collected reflections using HKL SCALEPACK.8 The structure was solved by direct methods with SHELXS-979 and the molecular model refined by the full-matrix least-squares procedure on F2 with SHELXL-97.10 The compound belongs to the monoclinic system. The a, b and c axes are: 12.7006(4)Å, 10.0271(5)Å and 20.1044(10)Å, respectively, and the β angle is 106.525(3)°. Cryst
{"title":"Analytical, Spectroscopic and Crystallographic Characterization of 3-[(2E)-3-Phenylprop-2-en-1-ylidene]pentane-2,4-dione","authors":"P. S. Resende, M. R. Couri, F. B. Miguel, A. Cuin","doi":"10.2116/xraystruct.36.15","DOIUrl":"https://doi.org/10.2116/xraystruct.36.15","url":null,"abstract":"Knoevenagel condensation is widely the main method to obtain a carbon–carbon double-bond reacting aldehyde or ketone with organic acid compounds. The condensation between formaldehyde and diethyl malonate, in the presence of diethylamine, appears to be the 1st example of this reaction.1 Doebner modification, for instance, is used to synthesize α-, βunsaturated compounds with advantageous since the reaction can be performed at room temperature, tolerate a variety of functional groups, and avoid unnecessary reactions.2 Another modification of the Knoevenagel reaction is known as the Weiss–Cook reaction, which is an extremely versatile reaction used for the synthesis of a high number of natural products.3,4 The title compound (Fig. 1) was obtained by following the literature.3 Briefly, about 10.3 mL (0.1 mol) of acetylacetone was mixed with 13.3 mL of cinnamaldehyde (0.1 mol), and the mixture was stirred under an ice bath. After 2 h, only one drop of pyrrolidine was added to the reaction solution, and stirring at room temperature (25°C) continued for 10 min. The solution was washed 3 times with a mixture of 10 mL of a HCl aqueous solution (1.0 mol L–1) and 10 mL of CH2Cl2. The organic layer was concentrated, yielding a residue which was purified by column chromatography using n-hexane and ethyl-acetate as an eluent (95:5) to afford the product in solution. Light-yellow crystals were obtained by slow evaporation of the solvent. The yield was 72%, m.p.: 105 – 107o C. Anal. Calcd (%) for C14H14O2: C, 78.5; H, 6.59; Found (%): C, 78.3; H, 6.61. IR bands: νC=O, 1700 cm–1; νC=C + νCCaromatic at 1607, 1541 and 1345 cm–1; νC–O at 1198 cm–1. 1H NMR (500 MHz, DMSO-d6) δ (ppm): 2.34 (s, 3H, CH3) and 2.40 (s, 3H, CH3); 7.035 (dd, 1H, J = 13.5 Hz, –HC=CH–CH=); 7.49 (J = 11.4Hz, 1H, –HC=CH–CH=) and 7.32 (J = 15.4 Hz, 1H, –HC=CH–CH=); 7.61 (d, 2H, J = 7.2, Haromatic); 7.42 (m, 3H, Haromatic). 13C (125 MHz, DMSO-d6) δ (ppm) 203 and 198 (C=O); 145, 142.6 and 124 (–HC=CH–CH=); 142, 135, 128.3, 129.5 and 130.3 (Caromatic and Cnon-hydrogenated). UV-Vis: 332 nm (π-π* transition). The X-ray measurements were performed on an Enraf-Nonius Kappa-CCD diffractometer with graphite-monochromated Mo Kα (λ = 0.71073 Å) radiation. Diffraction data were collected (φ and ω scans with κ-offsets) with COLLECT.5 Integration, scaling and reduction of the diffraction intensities were performed with HKL DENZO-SCALEPACK6 suite of programs. The data were corrected empirically for absorption effects with the multi-scan method.7 The unit cell parameters were obtained by leastsquares refinement based on the angular settings for all collected reflections using HKL SCALEPACK.8 The structure was solved by direct methods with SHELXS-979 and the molecular model refined by the full-matrix least-squares procedure on F2 with SHELXL-97.10 The compound belongs to the monoclinic system. The a, b and c axes are: 12.7006(4)Å, 10.0271(5)Å and 20.1044(10)Å, respectively, and the β angle is 106.525(3)°. Cryst","PeriodicalId":23922,"journal":{"name":"X-ray Structure Analysis Online","volume":" ","pages":""},"PeriodicalIF":0.2,"publicationDate":"2020-05-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.2116/xraystruct.36.15","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"46319842","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}