Pub Date : 2013-11-03DOI: 10.1007/978-3-319-02624-4_13
Wosley Arruda, C. Ralha, Tainá Raiol, M. Brigido, M. E. Walter, P. Stadler
{"title":"ncRNA-Agents: A Multiagent System for Non-coding RNA Annotation","authors":"Wosley Arruda, C. Ralha, Tainá Raiol, M. Brigido, M. E. Walter, P. Stadler","doi":"10.1007/978-3-319-02624-4_13","DOIUrl":"https://doi.org/10.1007/978-3-319-02624-4_13","url":null,"abstract":"","PeriodicalId":249082,"journal":{"name":"Brazilian Symposium on Bioinformatics","volume":"15 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-11-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"126437529","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2013-11-03DOI: 10.1007/978-3-319-02624-4_12
L. Cunha, L. Kowada, Rodrigo de A. Hausen, C. Figueiredo
{"title":"On the 1.375-Approximation Algorithm for Sorting by Transpositions in O(n logn) Time","authors":"L. Cunha, L. Kowada, Rodrigo de A. Hausen, C. Figueiredo","doi":"10.1007/978-3-319-02624-4_12","DOIUrl":"https://doi.org/10.1007/978-3-319-02624-4_12","url":null,"abstract":"","PeriodicalId":249082,"journal":{"name":"Brazilian Symposium on Bioinformatics","volume":"118 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-11-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"127078636","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2013-11-03DOI: 10.1007/978-3-319-02624-4_18
Hyrum D. Carroll, Alex C. Williams, Anthony G. Davis, J. Spouge
{"title":"False Discovery Rate for Homology Searches","authors":"Hyrum D. Carroll, Alex C. Williams, Anthony G. Davis, J. Spouge","doi":"10.1007/978-3-319-02624-4_18","DOIUrl":"https://doi.org/10.1007/978-3-319-02624-4_18","url":null,"abstract":"","PeriodicalId":249082,"journal":{"name":"Brazilian Symposium on Bioinformatics","volume":"73 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-11-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"122274426","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2013-11-03DOI: 10.1007/978-3-319-02624-4_8
C. H. Z. Siederdissen, I. Hofacker, P. Stadler
{"title":"How to Multiply Dynamic Programming Algorithms","authors":"C. H. Z. Siederdissen, I. Hofacker, P. Stadler","doi":"10.1007/978-3-319-02624-4_8","DOIUrl":"https://doi.org/10.1007/978-3-319-02624-4_8","url":null,"abstract":"","PeriodicalId":249082,"journal":{"name":"Brazilian Symposium on Bioinformatics","volume":"28 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-11-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"134497772","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2013-11-03DOI: 10.1007/978-3-319-02624-4_15
Ronnie Alves, Marcus Mendes, Diego Bonnato
{"title":"A Network-Based Meta-analysis Strategy for the Selection of Potential Gene Modules in Type 2 Diabetes","authors":"Ronnie Alves, Marcus Mendes, Diego Bonnato","doi":"10.1007/978-3-319-02624-4_15","DOIUrl":"https://doi.org/10.1007/978-3-319-02624-4_15","url":null,"abstract":"","PeriodicalId":249082,"journal":{"name":"Brazilian Symposium on Bioinformatics","volume":"86 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-11-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"114594369","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2013-11-03DOI: 10.1007/978-3-319-02624-4_2
H. Matsuno, Makoto Akashi
{"title":"Roles of RORα on Transcriptional Expressions in the Mammalian Circadian Regulatory System","authors":"H. Matsuno, Makoto Akashi","doi":"10.1007/978-3-319-02624-4_2","DOIUrl":"https://doi.org/10.1007/978-3-319-02624-4_2","url":null,"abstract":"","PeriodicalId":249082,"journal":{"name":"Brazilian Symposium on Bioinformatics","volume":"503 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-11-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"129995417","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2013-11-03DOI: 10.1007/978-3-319-02624-4_5
D. Sundfeld, A. Melo
{"title":"MSA-GPU: Exact Multiple Sequence Alignment Using GPU","authors":"D. Sundfeld, A. Melo","doi":"10.1007/978-3-319-02624-4_5","DOIUrl":"https://doi.org/10.1007/978-3-319-02624-4_5","url":null,"abstract":"","PeriodicalId":249082,"journal":{"name":"Brazilian Symposium on Bioinformatics","volume":"65 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-11-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"132992927","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2013-11-03DOI: 10.1007/978-3-319-02624-4_16
N. Figueroa, Xiaolin Liu, Jiajun Wang, J. Karro
{"title":"RAIDER: Rapid Ab Initio Detection of Elementary Repeats","authors":"N. Figueroa, Xiaolin Liu, Jiajun Wang, J. Karro","doi":"10.1007/978-3-319-02624-4_16","DOIUrl":"https://doi.org/10.1007/978-3-319-02624-4_16","url":null,"abstract":"","PeriodicalId":249082,"journal":{"name":"Brazilian Symposium on Bioinformatics","volume":"90 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-11-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"122913367","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2013-11-03DOI: 10.1007/978-3-319-02624-4_9
I. F. Viana, R. Dhalia, M. Krieger, E. Marques, R. Lins
{"title":"Influence of Scaffold Stability and Electrostatics on Top7-Based Engineered Helical HIV-1 Epitopes","authors":"I. F. Viana, R. Dhalia, M. Krieger, E. Marques, R. Lins","doi":"10.1007/978-3-319-02624-4_9","DOIUrl":"https://doi.org/10.1007/978-3-319-02624-4_9","url":null,"abstract":"","PeriodicalId":249082,"journal":{"name":"Brazilian Symposium on Bioinformatics","volume":"15 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-11-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"115007824","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2013-11-03DOI: 10.1007/978-3-319-02624-4_1
F. Amman, S. Bernhart, Gero Doose, I. Hofacker, Jing Qin, P. Stadler, S. Will
{"title":"The Trouble with Long-Range Base Pairs in RNA Folding","authors":"F. Amman, S. Bernhart, Gero Doose, I. Hofacker, Jing Qin, P. Stadler, S. Will","doi":"10.1007/978-3-319-02624-4_1","DOIUrl":"https://doi.org/10.1007/978-3-319-02624-4_1","url":null,"abstract":"","PeriodicalId":249082,"journal":{"name":"Brazilian Symposium on Bioinformatics","volume":"35 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-11-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"121582596","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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