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Engineering yellow fluorescent protein probe for visualization of parallel DNA G-quadruplex 工程黄色荧光蛋白探针显示平行DNA g -四重体
Pub Date : 2018-11-09 DOI: 10.32508/STDJ.V21I3.461
T. Truong, Trang T P Phan, Linh Le, D. Nguyen, H. Nguyen, D. T. Dang
Introduction: The formation of G-quadruplex plays a key role in many biological processes. Therefore, visualization of G-quadruplex is highly essential for design of G-quadruplex-targeted small molecules (drugs). Herein, we report on an engineered fluorescent protein probe which was able to distinguish G-quadruplex topologies. Methods: The fluorescent protein probe was generated by genetically incorporating yellow fluorescent protein (YFP) to RNA helicase associated with AU-rich element (RHAU) peptide motif. Results: This probe could selectively bind and visualize parallel G-quadruplex structure (T95-2T) at high affinity (Kd~130 nM). Visualization of the parallel G-quadruplex by RHAU-YFP could be easily observed in vitro by using normal Gel Doc or the naked eye. Conclusion: The YFP probe could be encoded in cells to provide a powerful tool for detection of parallel G-quadruplexes both in vitro and in vivo.  
g -四重体的形成在许多生物过程中起着关键作用。因此,g -四聚体的可视化对于g -四聚体靶向小分子(药物)的设计至关重要。在此,我们报道了一种工程荧光蛋白探针,它能够区分g -四重体拓扑结构。方法:将黄色荧光蛋白(YFP)与富au元素(RHAU)肽基序相关的RNA解旋酶基因结合,制备荧光蛋白探针。结果:该探针能以高亲和力(Kd~130 nM)选择性结合并可视化平行g -四联体结构(T95-2T)。通过正常凝胶或肉眼观察,RHAU-YFP可以很容易地在体外观察到平行g -四联体的可视化。结论:YFP探针可在细胞内编码,为体外和体内平行g -四联体的检测提供了强有力的工具。
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引用次数: 1
Analysis of 12C+12C scattering using different nuclear density distributions 不同核密度分布下的12C+12C散射分析
Pub Date : 2018-10-16 DOI: 10.32508/stdj.v21i3.431
Nguyen Dien Quoc Bao, Le Hoang Chien, C. Tao, Trịnh Hoa Lăng
Elastic 12C+12C angular distributions at three bombarding energies of 102.1, 112.0 and 126.1 MeV were analyzed in the framework of optical model (OM) and compared to the experimental data. The reality of the OM analysis using the double folding potential depends on the chosen nuclear density distributions. In this work, we use two available models of nuclear density distributions obtained from the electron scattering experiments and the density functional theory (DFT). The OM results show that the former gives better description of the 12C nuclear density distribution than the latter. Therefore, the DFT should be worked on for improving the nuclear density description of 12C in the future.
在光学模型(OM)框架下分析了102.1、112.0和126.1 MeV三种轰击能量下的弹性12C+12C角分布,并与实验数据进行了比较。使用双折叠势的OM分析的真实性取决于所选择的核密度分布。在这项工作中,我们使用了两个由电子散射实验和密度泛函理论(DFT)得到的核密度分布模型。OM结果表明,前者比后者能更好地描述12C核密度分布。因此,DFT是今后改进12C核密度描述的重要研究方向。
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引用次数: 0
Measurement of Indoor Radon Concentration in Dalat area 大叻地区室内氡浓度测定
Pub Date : 2018-10-10 DOI: 10.32508/STDJ.V21I2.432
H. Le
A significant contribution to natural exposure of humans is radon gas, which emanates from the soil and may concentrate in dwellings. The level of radon exposure varies around the globe, but limited data are available on the daily variations of indoor radon concentrations. In this study, indoor radon measurements were performed continuously within one week at six different places in Dalat, Vietnam using the real time Smart Radon Detector Radon Eye+. The indoor radon behavior in a day follows a sine pattern, with peak values in the early morning and lowest values in the late afternoon. There are also some fluctuations at specific times due to different weather conditions. Indoor radon concentrations in the Dalat regions were found to exceed the recommended guidelines and thresholds; excessive radon levels warranting health concern were found (150.7-340.0 Bq/m3). Some corrective actions to reduce indoor radon concentrations were recommended. Annual effective doses on different age categories were also calculated.
人类自然接触的一个重要因素是氡气,它从土壤中散发出来,并可能集中在住宅中。氡暴露水平在全球各地各不相同,但关于室内氡浓度每日变化的数据有限。在本研究中,使用实时智能氡探测器radon Eye+在一周内连续在越南大叻的六个不同地点进行室内氡测量。室内氡在一天中的行为遵循正弦曲线,清晨达到峰值,下午晚些时候达到最低点。由于不同的天气情况,在特定时间也会有一些波动。发现大叻地区室内氡浓度超过建议的指导方针和阈值;发现氡水平过高(150.7-340.0 Bq/m3),引起健康关注。建议采取一些纠正措施降低室内氡浓度。还计算了不同年龄组的年有效剂量。
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引用次数: 3
Stability and activity of TG25P phage in control of Aeromonas hydrophila in striped catfish pond water TG25P噬菌体对条纹鲶鱼池水嗜水气单胞菌控制的稳定性及活性研究
Pub Date : 2018-10-06 DOI: 10.32508/STDJ.V21I2.429
T. Xuân, H. A. Hoang, L. Tam
Introduction: Striped catfish (Pangasianodon hypohthalmus) is a native freshwater fish species in the Mekong Delta, Vietnam, and significantly contributes to national aqua exports. Currently, however, the sustainable development of striped catfish farming is being affected by bacterial pathogen infections, of which hemorrhagic septicemia caused by Aeromonas hydrophila bacteria is one of the most common diseases. Methods: In this study, the stability of TG25P and CT45P phages to factors such as temperature, pH, and organic solvents was investigated, with the stability of TG25P being found to be higher than that of CT45P. Results: The activity of TG25P was retained to approximately 90% and 80% at 37oC and 50oC for 1 h, respectively. Its activity was maintained to greater than 80% at pH 5-9 for 24 h and approximately 90-100% in organic solvents, such as chloroform or diethyl ether, for 1 h. In addition, the stability and activity of TG25P for the control of A. hydrophila in striped catfish pond water was also evaluated for 48 h. Conclusion: TG25P was found to be highly applicable in the creation of low-cost phage-containing products for the prospective application of phage therapy in prevention and treatment of hemorrhagic septicemia in striped catfish.  
简介:条纹鲶鱼(Pangasianodon hypohthalmus)是越南湄公河三角洲的一种本地淡水鱼,对国家水产出口有重要贡献。然而,目前鲶鱼养殖的可持续发展正受到细菌性病原体感染的影响,其中由嗜水气单胞菌引起的出血性败血症是最常见的疾病之一。方法:本研究考察了TG25P和CT45P噬菌体对温度、pH、有机溶剂等因素的稳定性,发现TG25P的稳定性高于CT45P。结果:TG25P在37℃和50℃作用1h后,活性分别保持在90%和80%左右。在pH 5-9条件下,TG25P的活性维持在80%以上24 h,在氯仿或乙醚等有机溶剂中,TG25P的活性维持在90-100%左右1 h。此外,TG25P对斑鱼池水中嗜水蚤的稳定性和活性也进行了48 h的评价。TG25P在低成本含噬菌体产品的制备中具有很高的适用性,为噬菌体治疗在条纹鲶鱼出血性败血症的预防和治疗中应用提供了前景。
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引用次数: 4
Multiple Modal Features and Multiple Kernel Learning for Human Daily Activity Recognition 人类日常活动识别的多模态特征和多核学习
Pub Date : 2018-10-03 DOI: 10.32508/STDJ.V21I2.441
V. Vo, Hoang M Pham
Introduction: Recognizing human activity in a daily environment has attracted much research in computer vision and recognition in recent years. It is a difficult and challenging topic not only inasmuch as the variations of background clutter, occlusion or intra-class variation in image sequences but also inasmuch as complex patterns of activity are created by interactions among people-people or people-objects. In addition, it also is very valuable for many practical applications, such as smart home, gaming, health care, human-computer interaction and robotics. Now, we are living in the beginning age of the industrial revolution 4.0 where intelligent systems have become the most important subject, as reflected in the research and industrial communities. There has been emerging advances in 3D cameras, such as Microsoft's Kinect and Intel's RealSense, which can capture RGB, depth and skeleton in real time. This creates a new opportunity to increase the capabilities of recognizing the human activity in the daily environment. In this research, we propose a novel approach of daily activity recognition and hypothesize that the performance of the system can be promoted by combining multimodal features. Methods: We extract spatial-temporal feature for the human body with representation of parts based on skeleton data from RGB-D data. Then, we combine multiple features from the two sources to yield the robust features for activity representation. Finally, we use the Multiple Kernel Learning algorithm to fuse multiple features to identify the activity label for each video. To show generalizability, the proposed framework has been tested on two challenging datasets by cross-validation scheme. Results: The experimental results show a good outcome on both CAD120 and MSR-Daily Activity 3D datasets with 94.16% and 95.31% in accuracy, respectively. Conclusion: These results prove our proposed methods are effective and feasible for activity recognition system in the daily environment.  
在日常环境中识别人类活动近年来引起了计算机视觉和识别领域的大量研究。这是一个困难和具有挑战性的课题,不仅因为图像序列中的背景杂波、遮挡或类内变化的变化,而且还因为人与人或人与物之间的相互作用产生了复杂的活动模式。此外,它在智能家居、游戏、医疗保健、人机交互和机器人等许多实际应用中也非常有价值。现在,我们正处于工业革命4.0的初期,智能系统已经成为最重要的主题,这反映在研究和工业社区中。3D相机已经有了新的进展,比如微软的Kinect和英特尔的RealSense,它们可以实时捕捉RGB、深度和骨架。这为提高识别日常环境中人类活动的能力创造了新的机会。在这项研究中,我们提出了一种新的日常活动识别方法,并假设通过结合多模态特征可以提高系统的性能。方法:基于RGB-D数据中的骨骼数据提取人体的时空特征,并进行部位表示。然后,我们将两个来源的多个特征结合起来,产生用于活动表示的鲁棒特征。最后,我们使用多核学习算法融合多个特征来识别每个视频的活动标签。为了证明该框架的可泛化性,采用交叉验证方案在两个具有挑战性的数据集上进行了测试。结果:在CAD120和MSR-Daily Activity 3D数据集上,实验结果均取得了较好的效果,准确率分别为94.16%和95.31%。结论:该方法在日常环境下的活动识别系统中是有效可行的。
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引用次数: 2
Evaluation the effect of several anticancer drugs on Vietnamese breast cancer cells 几种抗癌药物对越南乳腺癌细胞影响的评价
Pub Date : 2018-09-27 DOI: 10.32508/stdj.v21i2.488
O. Nguyen
In Viet Nam, data from Conference of Cancer organized by the Ministry of Health has shown that breast cancer is the most popular cancer in women. Current mainly treatments are surgery, chemotherapy, and radiotherapy. However, the rate of recurrence after five years was very high. One of the causes of high relapse is cancer cells develop multidrug-resistant (MDR) thus reduced the efficiency of treatments. In this research, MTT assay was used for measured cell viability of Vietnamese breast cancer cells (VNBRCA cells) and positive control MCF-7 cell lines after treatment with several anticancer drugs as Doxorubicin (DOX), Tamoxifen (TAM), Mitomycin C (MMC) in 48h. After that, cancer cells were treated at haft maximal inhibitory concentration (IC50) of anticancer drug and observed cell morphology, apoptosis of cellular nuclear by AO/PI staining. IC50 value of VNBRCA cells with DOX, TAM, MMC were 0.641± 0.07 µM, 4.639 ± 0.933 µM and 1.338 ± 0.176 µM, respectively, which higher than IC50 of MCF-7 with DOX, TAM, MMC was 0.168 ± 0.037 µM, 7.085 ± 0.87 µM and 0.379 ± 0.159 µM, respectively. The response of VNBRCA cells with several anticancer drugs as DOX, TAM, and MMC was lower than the response of MCF-7, therefore, it showed that the specific features of VNBRCA cells; from which develop specific treatments for Vietnamese breast cancer patients.
在越南,卫生部组织的癌症会议的数据表明,乳腺癌是妇女中最常见的癌症。目前主要的治疗方法有手术、化疗和放疗。然而,5年后的复发率非常高。复发率高的原因之一是癌细胞产生多药耐药(MDR),从而降低了治疗效率。本研究采用MTT法测定越南乳腺癌细胞(VNBRCA细胞)和阳性对照MCF-7细胞株在多柔比星(DOX)、他莫昔芬(TAM)、丝裂霉素C (MMC)等多种抗癌药物治疗48h后的细胞活力。然后以抗癌药物的半数最大抑制浓度(IC50)处理癌细胞,AO/PI染色观察细胞形态、细胞核凋亡情况。DOX、TAM、MMC对VNBRCA细胞的IC50分别为0.641±0.07µM、4.639±0.933µM和1.338±0.176µM,高于DOX、TAM、MMC对MCF-7细胞的IC50分别为0.168±0.037µM、7.085±0.87µM和0.379±0.159µM。VNBRCA细胞对DOX、TAM、MMC等几种抗癌药物的反应低于MCF-7的反应,因此,显示了VNBRCA细胞的特异性;开发针对越南乳腺癌患者的特殊治疗方法。
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引用次数: 2
Testing the Phillips curve in Vietnam 在越南测试菲利普斯曲线
Pub Date : 2018-09-22 DOI: 10.32508/stdj.v19i1.527
Dandan Dang, Binh Vu
This paper employs qualitative and quantitative methods to test the theory of Philips Curve in Vietnam in the period between 2000 and 2014. The results show that the Philips Curve applies to the actual situation of the Vietnam’s economy, which is useful for both macro-economic planning by the Government and monetary policy making by the State Bank of Vietnam. The paper also suggests implications of an increased application of the Philips Curve to the economic policy management, thereby contributing to the stabilized socio-economic development in Vietnam
本文采用定性和定量相结合的方法,对2000 - 2014年越南的飞利浦曲线理论进行检验。结果表明,Philips曲线适用于越南经济的实际情况,对越南政府的宏观经济规划和越南国家银行的货币政策制定都有帮助。本文还提出了在经济政策管理中增加应用飞利浦曲线的意义,从而有助于越南社会经济的稳定发展
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引用次数: 0
Determination of cysteamine in animal feeds by high performance liquid chromatography with diode-array detection (HPLC-DAD) 高效液相色谱-二极管阵列检测(HPLC-DAD)测定动物饲料中的半胱胺
Pub Date : 2018-09-10 DOI: 10.32508/STDJ.V21I2.427
P. H. Nguyen
A HPLC-DAD method for the determination of cysteamine supplementation in commercial animal feeds was developed. Samples were extracted with a mixture of 0.5 % hydrochloric acid – acetonitrile (90:10, v/v), matrix interferences were removed with a C18 cartridge, cysteamine was derivatized using 5,5'-dithiobis-(2-nitrobenzoic) acid (DTNB) as Ellman's reagent targeting to the thiol group in the molecule. Quantification of cysteamine was performed on a c18 column with DAD at 323 nm. The developed method had LOD of 1.1 mg/l, good linearity of the calibration curve (R2 ≥ 0.9998), high recoveries (> 92 %), and high reproducibility (RSD < 2.0%).
建立了HPLC-DAD测定商品动物饲料中半胱胺添加量的方法。样品用0.5%盐酸-乙腈(90:10,v/v)的混合物提取,用C18滤筒去除基质干扰,用5,5'-二硫代比斯-(2-硝基苯甲酸)酸(DTNB)作为Ellman试剂针对分子中的硫基衍生化半胱胺。采用c18色谱柱,DAD在323 nm处进行半胱胺定量。方法的检出限为1.1 mg/l,线性关系良好(R2≥0.9998),加样回收率高(> 92%),重现性好(RSD < 2.0%)。
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引用次数: 2
Research and design of an improved solar still for desalination 海水淡化用改进型太阳能蒸馏器的研究与设计
Pub Date : 2018-08-31 DOI: 10.32508/STDJ.V21I2.423
Truong Thi Cam Trang, Dinh Pham, P. T. Phan
Water is one of the most important resources on Earth because of its vital role for human beings and other living creatures. During the devastating drought in the Mekong Delta in 2016, millions of people had no access to the secure source of fresh water. This issue cautioned and influenced the Vietnamese government to find an effective desalination process for the coastal areas impacted heavily by salinization. However, desalination processes require large amounts of energy which can be a problem for the coastal areas due to the lack of energy and high cost. The main purpose of the study herein was to find an alternative solution for desalination by designing a desalination system using solar energy. The design was expected to provide a small size desalination system for households. The average output of the system was about 854 ml/day with the productivity at 2223.54 ml/day/m2. The average water capture efficiency was 80.5%, the salt elimination efficiency of the system was about 99.99%, and the salinity of the output water was below 2 ppm. The results are still far from ideal but they indicate a potential solution for coping with the shortage of fresh water in coastal areas.
水是地球上最重要的资源之一,因为它对人类和其他生物至关重要。在2016年湄公河三角洲发生的严重干旱期间,数百万人无法获得安全的淡水来源。这一问题提醒并影响了越南政府为受盐碱化严重影响的沿海地区寻找有效的脱盐工艺。然而,海水淡化过程需要大量的能源,由于缺乏能源和高成本,这对沿海地区来说可能是一个问题。本文研究的主要目的是通过设计一种利用太阳能的海水淡化系统来寻找一种替代的海水淡化解决方案。该设计预计将为家庭提供小型海水淡化系统。系统平均产量约为854 ml/d,生产效率为2223.54 ml/d /m2。平均捕水效率为80.5%,系统除盐效率约为99.99%,输出水的盐度低于2 ppm。结果还远远不够理想,但它们表明了应对沿海地区淡水短缺的潜在解决方案。
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引用次数: 0
Phenotypic and cytogenetic characterization of expanded adipose derived stem cells 扩大脂肪来源干细胞的表型和细胞遗传学特征
Pub Date : 2018-06-21 DOI: 10.32508/STDJ.V21I1.426
N. Truong, A. Vu, Vuong M Pham
Introduction: Human adipose derived stem cells (hASCs) have great potential for regenerative medicine. The demand for hASCs, especially in the development of off-the-shelf products, is increasing. Although the initial receipt of hASCs was relatively limited, there is now greater interest and also awareness that in vitro expansion of hASCs be further explored. The purpose of this study was to assess the integrity of mesenchymal cell characteristics and the mutant capability of chromosome number on hASCs undergoing in vitro expansion. Methods: In this study, three hASC samples from three Vietnamese people were collected and proliferated in MSCCult medium (Regemedlab, Ho Chi Minh City, Viet Nam) to the 5th cell passage. Next, hASCs were evaluated for change of mesenchymal stem cells (MSCs) characteristics including shape, immunophenotype (CD14, CD34, CD44, CD73, CD90, and/or CD166), and trilineage differentiation ability. Finally, the number of chromosomes after passages 1, 3, and 5 was evaluated by karyotyping technique. Results: The results showed that after five passages of culture, hASCs preserved the characteristic shape of MSCs, high expression of mesenchymal markers (e.g. CD44, CD73, CD90, and CD166). However, the cells also maintained their differentiation capacity to develop into various tissues such as bone, cartilage, and fat. The hASCs showed no mutation in the number of chromosomes. However, markers of hematopoietic cells (such as CD14 and CD34) exhibited heterogeneous changes between the samples during proliferation. Conclusion: In conclusion, at passage 5, hASCs retained the integrity of MSC features and there was no mutation discovered in the number of chromosomes. However, further evaluation is needed to conclude that the use of cultured cells in treatment is effective and safe.
摘要:人脂肪源性干细胞(hASCs)具有巨大的再生医学潜力。对hasc的需求正在增加,特别是在开发现成产品方面。虽然最初接受的hASCs相对有限,但现在有更大的兴趣和意识到hASCs的体外扩增有待进一步探索。本研究的目的是评估间充质细胞特征的完整性和染色体数目在体外扩增的hASCs上的突变能力。方法:本研究收集3名越南人的3份hASC样本,在MSCCult培养基(Regemedlab, Ho Chi Minh City, vietnam)中增殖至第5代。接下来,评估hASCs间充质干细胞(MSCs)特征的变化,包括形状、免疫表型(CD14、CD34、CD44、CD73、CD90和/或CD166)和三岁分化能力。最后,用核型技术对1、3、5代后的染色体数目进行分析。结果:经过5代培养,hASCs保持了MSCs的特征形态,间充质标记物(CD44、CD73、CD90、CD166)的高表达。然而,细胞也保持了分化能力,发育成骨、软骨、脂肪等多种组织。hASCs在染色体数量上未见突变。然而,造血细胞的标志物(如CD14和CD34)在增殖过程中在样品之间表现出异质变化。结论:综上所述,在传代5时,hASCs保持了MSC特征的完整性,染色体数量未发生突变。然而,需要进一步的评估才能得出使用培养细胞治疗是有效和安全的结论。
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引用次数: 0
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