首页 > 最新文献

J. Am. Medical Informatics Assoc.最新文献

英文 中文
Research Paper: Clinicians' Response to Computerized Detection of Infections 研究论文:临床医生对计算机检测感染的反应
Pub Date : 2001-03-01 DOI: 10.1136/jamia.2001.0080117
B. Rocha, J. Christenson, R. Evans, R. Gardner
Objective: To analyze whether computer-generated reminders about infections could influence clinicians' practice patterns and consequently improve the detection and manage- ment of nosocomial infections. Design: The conclusions produced by an expert system developed to detect and manage infections were presented to the attending clinicians in a pediatric hospital to determine whether this infor- mation could improve detection and management. Clinician interventions were compared before and after the implementation of the system. Measurements: The responses of the clinicians (staff physicians, physician assistants, and nurse practitioners) to the reminders were determined by review of paper medical charts. Main outcome measures were the number of suggestions to treat and manage infections that were followed before and after the implementation of COMPISS (Computerized Pediatric Infection Surveillance System). The clinicians' opinions about the system were assessed by means of a paper questionnaire distrib- uted following the experiment. Results: The results failed to show a statistical difference between the clinicians' treatment strategies before and after implementation of the system (P > 0.33 for clinicians working in the emergency room and P > 0.45 for clinicians working in the pediatric intensive care unit). The questionnaire results showed that the respondents appreciated the information presented by the system. Conclusion: The computer-generated reminders about infections were unable to influence the practice patterns of clinicians. The methodologic problems that may have contributed to this negative result are discussed. � J Am Med Inform Assoc. 2001;8:117-125.
目的:分析计算机生成的感染提醒是否能影响临床医生的执业模式,从而提高医院感染的发现和管理水平。设计:将检测和管理感染的专家系统得出的结论提交给儿科医院的主治医生,以确定这些信息是否可以改善检测和管理。比较实施该系统前后临床医生的干预措施。测量:临床医生(主治医师、医师助理和执业护士)对提醒的反应是通过审查纸质医疗图表来确定的。主要观察指标为实施计算机化儿童感染监测系统(COMPISS)前后所遵循的感染治疗和管理建议的数量。临床医生对该系统的意见通过在实验后分发的纸质问卷进行评估。结果:系统实施前后临床医生的治疗策略差异无统计学意义(急诊室临床医生P > 0.33,儿科重症监护病房临床医生P > 0.45)。问卷调查结果显示,受访者对系统提供的信息表示赞赏。结论:计算机生成的感染提醒不能影响临床医生的执业模式。讨论了可能导致这一消极结果的方法学问题。[J]中华医学杂志,2001;
{"title":"Research Paper: Clinicians' Response to Computerized Detection of Infections","authors":"B. Rocha, J. Christenson, R. Evans, R. Gardner","doi":"10.1136/jamia.2001.0080117","DOIUrl":"https://doi.org/10.1136/jamia.2001.0080117","url":null,"abstract":"Objective: To analyze whether computer-generated reminders about infections could influence clinicians' practice patterns and consequently improve the detection and manage- ment of nosocomial infections. Design: The conclusions produced by an expert system developed to detect and manage infections were presented to the attending clinicians in a pediatric hospital to determine whether this infor- mation could improve detection and management. Clinician interventions were compared before and after the implementation of the system. Measurements: The responses of the clinicians (staff physicians, physician assistants, and nurse practitioners) to the reminders were determined by review of paper medical charts. Main outcome measures were the number of suggestions to treat and manage infections that were followed before and after the implementation of COMPISS (Computerized Pediatric Infection Surveillance System). The clinicians' opinions about the system were assessed by means of a paper questionnaire distrib- uted following the experiment. Results: The results failed to show a statistical difference between the clinicians' treatment strategies before and after implementation of the system (P > 0.33 for clinicians working in the emergency room and P > 0.45 for clinicians working in the pediatric intensive care unit). The questionnaire results showed that the respondents appreciated the information presented by the system. Conclusion: The computer-generated reminders about infections were unable to influence the practice patterns of clinicians. The methodologic problems that may have contributed to this negative result are discussed. � J Am Med Inform Assoc. 2001;8:117-125.","PeriodicalId":344533,"journal":{"name":"J. Am. Medical Informatics Assoc.","volume":"148 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2001-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"115357959","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 8
Research Paper: Studying the Human- Computer-Terminology Interface 研究论文:人机术语界面研究
Pub Date : 2001-03-01 DOI: 10.1136/jamia.2001.0080163
J. Cimino, V. Patel, A. Kushniruk
Objective: To explore the use of an observational, cognitive-based approach for differentiating between successful, suboptimal, and failed entry of coded data by clinicians in actual practice, and to detect whether causes for unsuccessful attempts to capture true intended meaning were due to terminology content, terminology representation, or user interface problems. Design: Observational study with videotaping and subsequent coding of data entry events in an outpatient clinic at New York Presbyterian Hospital. Participants: Eight attending physicians, 18 resident physicians, and 1 nurse practitioner, using the Medical Entities Dictionary (MED) to record patient problems, medications, and adverse reactions in an outpatient medical record system. Measurements: Classification of data entry events as successful, suboptimal, or failed, and estimation of cause; recording of system response time and total event time. Results: Two hundred thirty-eight data entry events were analyzed; 71.0 percent were successful, 6.3 percent suboptimal, and 22.7 percent failed; unsuccessful entries were due to problems with content in 13.0 percent of events, representation problems in 10.1 percent of events, and usability problems in 5.9 percent of events. Response time averaged 0.74 sec, and total event time averaged 40.4 sec. Of an additional 209 tasks related to drug dose and frequency terms, 94 percent were successful, 0.5 percent were suboptimal, and 6 percent failed, for an overall success rate of 82 percent. Conclusions: Data entry by clinicians using the outpatient system and the MED was generally successful and efficient. The cognitive-based observational approach permitted detection of false- positive (suboptimal) and false-negative (failed due to user interface) data entry. � J Am Med Inform Assoc. 2001;8:163-173.
目的:探讨临床医生在实际操作中使用一种观察性的、基于认知的方法来区分编码数据输入的成功、次优和失败,并检测捕获真实意图的尝试失败的原因是否由于术语内容、术语表示或用户界面问题。设计:在纽约长老会医院门诊对数据录入事件进行录像和随后编码的观察性研究。参与者:8名主治医生,18名住院医生和1名执业护士,使用医疗实体词典(MED)在门诊医疗记录系统中记录患者的问题,药物和不良反应。测量:将数据输入事件分类为成功、次优或失败,并估计原因;记录系统响应时间和总事件时间。结果:分析了238个数据输入事件;71.0%成功,6.3%次优,22.7%失败;不成功的条目是由于13.0%的事件中的内容问题,10.1%的事件中的表示问题,以及5.9%的事件中的可用性问题。反应时间平均为0.74秒,总事件时间平均为40.4秒。在与药物剂量和频率相关的额外209项任务中,94%成功,0.5%次优,6%失败,总体成功率为82%。结论:临床医生使用门诊系统和MED的数据输入通常是成功和有效的。基于认知的观察方法允许检测假阳性(次优)和假阴性(由于用户界面失败)数据输入。[J]中华医学杂志,2001;8(3):693 - 693。
{"title":"Research Paper: Studying the Human- Computer-Terminology Interface","authors":"J. Cimino, V. Patel, A. Kushniruk","doi":"10.1136/jamia.2001.0080163","DOIUrl":"https://doi.org/10.1136/jamia.2001.0080163","url":null,"abstract":"Objective: To explore the use of an observational, cognitive-based approach for differentiating between successful, suboptimal, and failed entry of coded data by clinicians in actual practice, and to detect whether causes for unsuccessful attempts to capture true intended meaning were due to terminology content, terminology representation, or user interface problems. Design: Observational study with videotaping and subsequent coding of data entry events in an outpatient clinic at New York Presbyterian Hospital. Participants: Eight attending physicians, 18 resident physicians, and 1 nurse practitioner, using the Medical Entities Dictionary (MED) to record patient problems, medications, and adverse reactions in an outpatient medical record system. Measurements: Classification of data entry events as successful, suboptimal, or failed, and estimation of cause; recording of system response time and total event time. Results: Two hundred thirty-eight data entry events were analyzed; 71.0 percent were successful, 6.3 percent suboptimal, and 22.7 percent failed; unsuccessful entries were due to problems with content in 13.0 percent of events, representation problems in 10.1 percent of events, and usability problems in 5.9 percent of events. Response time averaged 0.74 sec, and total event time averaged 40.4 sec. Of an additional 209 tasks related to drug dose and frequency terms, 94 percent were successful, 0.5 percent were suboptimal, and 6 percent failed, for an overall success rate of 82 percent. Conclusions: Data entry by clinicians using the outpatient system and the MED was generally successful and efficient. The cognitive-based observational approach permitted detection of false- positive (suboptimal) and false-negative (failed due to user interface) data entry. � J Am Med Inform Assoc. 2001;8:163-173.","PeriodicalId":344533,"journal":{"name":"J. Am. Medical Informatics Assoc.","volume":"8 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2001-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"116491078","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 41
Viewpoint: Progress with Formalization in Medical Informatics? 观点:医学信息学正规化的进步?
Pub Date : 2001-03-01 DOI: 10.1136/jamia.2001.0080126
A. Maas, A. J. T. Hoopen, A. Hofstede
The prevailing view of medical informatics as a primarily subservient discipline in health care is challenged. Developments in both general informatics and medical informatics are described to identify desirable properties of modeling languages and tools needed to solve key problems in the application field. For progress in medical informatics, it is considered essential to develop far more formal modeling languages, modeling techniques, and tools. A major aim of this development should be to expel ambiguity from concepts essential to medicine, positioning medical informatics "at the heart of health care."
医学信息学作为卫生保健的主要附属学科的流行观点受到挑战。描述了通用信息学和医学信息学的发展,以确定解决应用领域关键问题所需的建模语言和工具的理想属性。为了医学信息学的进步,开发更加正式的建模语言、建模技术和工具被认为是必不可少的。这一发展的一个主要目标应该是消除医学基本概念的模糊性,将医学信息学定位为“医疗保健的核心”。
{"title":"Viewpoint: Progress with Formalization in Medical Informatics?","authors":"A. Maas, A. J. T. Hoopen, A. Hofstede","doi":"10.1136/jamia.2001.0080126","DOIUrl":"https://doi.org/10.1136/jamia.2001.0080126","url":null,"abstract":"The prevailing view of medical informatics as a primarily subservient discipline in health care is challenged. Developments in both general informatics and medical informatics are described to identify desirable properties of modeling languages and tools needed to solve key problems in the application field. For progress in medical informatics, it is considered essential to develop far more formal modeling languages, modeling techniques, and tools. A major aim of this development should be to expel ambiguity from concepts essential to medicine, positioning medical informatics \"at the heart of health care.\"","PeriodicalId":344533,"journal":{"name":"J. Am. Medical Informatics Assoc.","volume":"12 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2001-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"133628251","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
American College of Medical Informatics FELLOWS, 2000 美国医学信息学院研究员,2000年
Pub Date : 2001-03-01 DOI: 10.1136/jamia.2001.0080194
W. Stead
David Bates is Chief, Division of General Medicine at Brigham and Women's Hospital, and Medical Director, Clinical and Quality Analysis at Partners HealthCare System, Inc. He is also an Associate Professor in Medicine at Harvard Medical School and has a joint appointment at Harvard School of Public Health in the Department of Health Policy and Management. Dr. Bates received his BS degree in Chemistry from Stanford University, his MD from Johns Hopkins School of Medicine, and his MSc from Harvard School of Public Health (Department of Health Policy and Management). He completed residency training in internal medicine at the Oregon Health Sciences University and a postdoctoral research fellowship in medicine at the Harvard Medical School.Dr. Bates' primary informatics interest has been the use of computerized decision support to improve safety and thereby reduce the costs of care. A particular focus has been on improving the systems by which drugs are given, to reduce the frequency of medication errors and adverse drug events. One study he led demonstrated that implementation of computerized physician order entry reduced the rate of serious medication errors by 55 percent. Other research interests include affecting physicians' decision making, particularly using computerized interventions; quality of care and cost-effectiveness in medical practice; and outcomes assessment.Dr. Bates has been the recipient of numerous awards, including a National Research Service Award; the Henry Christian Award for Excellence in Research; the Culpeper Award; the Young Investigator of the Year from the Society of General Internal Medicine, Northeast Region; Clinical Investigator of the Year, Center for Healthcare Information Management; the Partners in Excellence Award Quality Treatment and Service and Leadership and Innovation; and the Cheers Award for Outstanding Contribution to Medication Error Prevention from the Institute for Safe Medication Practices.Dr. Bates is a Scientific Advisor, SCRIPT Project, Health Care …
David Bates是Brigham and Women's Hospital的综合医学部主任,Partners HealthCare System, Inc.的临床和质量分析医学主任。他也是哈佛大学医学院的医学副教授,并在哈佛大学公共卫生学院的卫生政策和管理系担任联合任命。他持有Stanford University的化学学士学位,Johns Hopkins School of Medicine的医学博士学位,以及Harvard School of Public Health (Health Policy and Management Department)的理学硕士学位。他在俄勒冈健康科学大学(Oregon Health Sciences University)完成了内科住院医师培训,并在哈佛医学院(Harvard Medical school)获得医学博士后研究奖学金。贝茨的主要信息学兴趣是使用计算机决策支持来提高安全性,从而降低护理成本。一个特别的重点是改善给药系统,以减少药物错误和药物不良事件的频率。他领导的一项研究表明,计算机化医嘱输入的实施将严重用药错误率降低了55%。其他研究兴趣包括影响医生的决策,特别是使用计算机干预;医疗服务的质量和成本效益;和结果评估。贝茨获得了许多奖项,包括国家研究服务奖;亨利·克里斯蒂安卓越研究奖;卡尔佩珀奖;东北地区全科内科学会年度优秀青年研究员;医疗信息管理中心年度最佳临床研究者;卓越合作伙伴奖、优质待遇及服务奖、领导及创新奖;以及安全用药实践研究所颁发的“预防用药错误杰出贡献奖”。贝茨是科学顾问,SCRIPT项目,医疗保健…
{"title":"American College of Medical Informatics FELLOWS, 2000","authors":"W. Stead","doi":"10.1136/jamia.2001.0080194","DOIUrl":"https://doi.org/10.1136/jamia.2001.0080194","url":null,"abstract":"David Bates is Chief, Division of General Medicine at Brigham and Women's Hospital, and Medical Director, Clinical and Quality Analysis at Partners HealthCare System, Inc. He is also an Associate Professor in Medicine at Harvard Medical School and has a joint appointment at Harvard School of Public Health in the Department of Health Policy and Management. Dr. Bates received his BS degree in Chemistry from Stanford University, his MD from Johns Hopkins School of Medicine, and his MSc from Harvard School of Public Health (Department of Health Policy and Management). He completed residency training in internal medicine at the Oregon Health Sciences University and a postdoctoral research fellowship in medicine at the Harvard Medical School.\u0000\u0000Dr. Bates' primary informatics interest has been the use of computerized decision support to improve safety and thereby reduce the costs of care. A particular focus has been on improving the systems by which drugs are given, to reduce the frequency of medication errors and adverse drug events. One study he led demonstrated that implementation of computerized physician order entry reduced the rate of serious medication errors by 55 percent. Other research interests include affecting physicians' decision making, particularly using computerized interventions; quality of care and cost-effectiveness in medical practice; and outcomes assessment.\u0000\u0000Dr. Bates has been the recipient of numerous awards, including a National Research Service Award; the Henry Christian Award for Excellence in Research; the Culpeper Award; the Young Investigator of the Year from the Society of General Internal Medicine, Northeast Region; Clinical Investigator of the Year, Center for Healthcare Information Management; the Partners in Excellence Award Quality Treatment and Service and Leadership and Innovation; and the Cheers Award for Outstanding Contribution to Medication Error Prevention from the Institute for Safe Medication Practices.\u0000\u0000Dr. Bates is a Scientific Advisor, SCRIPT Project, Health Care …","PeriodicalId":344533,"journal":{"name":"J. Am. Medical Informatics Assoc.","volume":"1 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2001-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"130822122","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Policy of the American Medical Informatics Association (AMIA) on Documents for Circulation, Position Papers and Policy Statements 美国医学信息学协会(AMIA)关于流通文件、立场文件和政策声明的政策
Pub Date : 1997-11-01 DOI: 10.1136/jamia.1997.0040483
Committees
AMIA working groups and committees are encouraged to discuss, document, circulate, and publish (in paper or electronic media) articles, views, issues and recommendations for positions and policy of pertinence to health care informatics. However, documents from AMIA working groups and committees cannot be circulated or distributed as working group or committee documents without the approval of the appropriate AMIA administrative body. Thus, a document that is to represent the work or views of a working group must have the approval of the working group and the Working Group Steering Committee, and a document that is to represent the work of a committee of the AMIA board must have the approval of the Board. Further, …
鼓励AMIA工作组和委员会讨论、记录、分发和出版(在纸质或电子媒体上)与卫生保健信息学相关的文章、观点、问题和立场和政策建议。但是,非经适当的非盟行政机构核准,非盟各工作组和委员会的文件不得作为工作组或委员会文件分发或分发。因此,代表工作组工作或意见的文件必须得到工作组和工作组指导委员会的批准,代表AMIA董事会委员会工作的文件必须得到董事会的批准。此外,……
{"title":"Policy of the American Medical Informatics Association (AMIA) on Documents for Circulation, Position Papers and Policy Statements","authors":"Committees","doi":"10.1136/jamia.1997.0040483","DOIUrl":"https://doi.org/10.1136/jamia.1997.0040483","url":null,"abstract":"AMIA working groups and committees are encouraged to discuss, document, circulate, and publish (in paper or electronic media) articles, views, issues and recommendations for positions and policy of pertinence to health care informatics. However, documents from AMIA working groups and committees cannot be circulated or distributed as working group or committee documents without the approval of the appropriate AMIA administrative body. Thus, a document that is to represent the work or views of a working group must have the approval of the working group and the Working Group Steering Committee, and a document that is to represent the work of a committee of the AMIA board must have the approval of the Board. Further, …","PeriodicalId":344533,"journal":{"name":"J. Am. Medical Informatics Assoc.","volume":"30 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1997-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"117166771","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Book Review: Telemedicine: A Guide to Assessing Telecommunications in Health Care 书评:远程医疗:卫生保健电信评估指南
Pub Date : 1997-03-01 DOI: 10.1136/jamia.1997.0040136
D. Masys
{"title":"Book Review: Telemedicine: A Guide to Assessing Telecommunications in Health Care","authors":"D. Masys","doi":"10.1136/jamia.1997.0040136","DOIUrl":"https://doi.org/10.1136/jamia.1997.0040136","url":null,"abstract":"","PeriodicalId":344533,"journal":{"name":"J. Am. Medical Informatics Assoc.","volume":"12 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1997-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"129313164","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 8
Application of Information Technology: Design and Applications of a Multimodality Image Data Warehouse Framework 信息技术的应用:多模态图像数据仓库框架的设计与应用
Pub Date : 1900-01-01 DOI: 10.1197/jamia.M0988
Stephen T. C. Wong, K. S. Hoo, R. Knowlton, K. Laxer, Xinhua Cao, R. Hawkins, W. Dillon, R. Arenson
{"title":"Application of Information Technology: Design and Applications of a Multimodality Image Data Warehouse Framework","authors":"Stephen T. C. Wong, K. S. Hoo, R. Knowlton, K. Laxer, Xinhua Cao, R. Hawkins, W. Dillon, R. Arenson","doi":"10.1197/jamia.M0988","DOIUrl":"https://doi.org/10.1197/jamia.M0988","url":null,"abstract":"","PeriodicalId":344533,"journal":{"name":"J. Am. Medical Informatics Assoc.","volume":"42 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"114545705","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 44
Special Focus on Biomedical Data Science 特别关注生物医学数据科学
Pub Date : 1900-01-01 DOI: 10.1093/jamia/ocx151
L. Ohno-Machado
JAMIA has documented the evolution of biomedical informatics through its dissemination of original research and applications, brief communications and case studies, thought-provoking perspectives, and insightful reviews. The number and diversity of data-driven models have increased substantially in the past few years. From the first developments in machine and statistical learning that were applied to health sciences decades ago, our field has flourished to include biomedical data science as one of its important components, which is possible only because of other informatics work that allows data to be standardized, integrated, and used in various learning models. This issue is focused on biomedical data science and illustrates a broad range of techniques and application areas in this field; articles submitted in response to a specific request for papers are featured in an editorial by Brennan et al. (p. 2). In addition to the articles covered in the editorial, this issue highlights tools and applications of data science in a variety of domains, all of which use clinical text as a source of data: Trivedi (p. 81) presents an interactive tool for processing clinical text, Luo (p. 93) uses convolutional neural networks to classify relations in clinical notes, and Bejan (p. 61) introduces an approach to find homelessness and adverse childhood experiences described in clinical narratives. Additionally, nonclinical text is increasing in importance for health care and public health. Xie (p. 72) uses recurrent neural networks to find e-cigarette adverse events in social media posts, while Vigo (p. 88) describes a method to collect seasonal allergy symptoms for the British population. New types of structured data and new ways to integrate them are also continuously being produced: Doostparasti (p. 99) describes a novel approach for integrating -omics data to enhance phenotype classification performance, and Yu (p. 54) introduces a phenotyping algorithm that does not depend on expert-labeled observations. The articles listed above are only a few examples of the scope of informatics activities covered in JAMIA. Starting with this January issue, readers will be able to easily group articles into themes based on technologies used or application areas. This grouping is made possible by JAMIA’s change in frequency and format (to monthly online), which will allow for more frequent indexing. Readers will be able to compare approaches and discover solutions that are best suited to their problems. Stay tuned for additional data science articles in future monthly issues, as well as articles focused on clinical informatics systems (including clinical decision support), clinical research systems, translational bioinformatics, global public health informatics, and many other subfields of informatics that help us, through information technology, understand and address human health and disease.
JAMIA通过传播原始研究和应用、简短的交流和案例研究、发人深省的观点和有见地的评论,记录了生物医学信息学的发展。在过去几年中,数据驱动模型的数量和多样性大大增加。从几十年前应用于健康科学的机器和统计学习的第一次发展开始,我们的领域已经蓬勃发展,将生物医学数据科学作为其重要组成部分之一,这是可能的,因为其他信息学工作允许数据标准化,集成并用于各种学习模型。本刊重点关注生物医学数据科学,并阐述了该领域的广泛技术和应用领域;响应特定论文请求而提交的文章在Brennan等人的社论中有特色(第2页)。除了社论中涵盖的文章外,本期还重点介绍了数据科学在各个领域的工具和应用,所有这些领域都使用临床文本作为数据来源:Trivedi(第81页)提出了一种用于处理临床文本的交互式工具,Luo(第93页)使用卷积神经网络对临床记录中的关系进行分类,Bejan(第61页)介绍了一种方法来发现临床叙述中描述的无家可归和不良童年经历。此外,非临床文本对卫生保健和公共卫生的重要性日益增加。Xie(第72页)使用递归神经网络在社交媒体帖子中发现电子烟不良事件,而Vigo(第88页)描述了一种收集英国人群季节性过敏症状的方法。新类型的结构化数据和整合它们的新方法也在不断产生:Doostparasti(第99页)描述了一种整合组学数据以增强表型分类性能的新方法,Yu(第54页)介绍了一种不依赖于专家标记观察的表型算法。上面列出的文章只是JAMIA所涵盖的信息学活动范围的几个例子。从今年1月开始,读者将能够根据所使用的技术或应用领域轻松地将文章分组为主题。这种分组是由于JAMIA在频率和格式上的改变(改为每月在线),这将允许更频繁的索引。读者将能够比较方法并发现最适合他们问题的解决方案。请继续关注未来月刊中更多的数据科学文章,以及关注临床信息学系统(包括临床决策支持)、临床研究系统、转化生物信息学、全球公共卫生信息学和许多其他信息学子领域的文章,这些文章帮助我们通过信息技术了解和解决人类健康和疾病。
{"title":"Special Focus on Biomedical Data Science","authors":"L. Ohno-Machado","doi":"10.1093/jamia/ocx151","DOIUrl":"https://doi.org/10.1093/jamia/ocx151","url":null,"abstract":"JAMIA has documented the evolution of biomedical informatics through its dissemination of original research and applications, brief communications and case studies, thought-provoking perspectives, and insightful reviews. The number and diversity of data-driven models have increased substantially in the past few years. From the first developments in machine and statistical learning that were applied to health sciences decades ago, our field has flourished to include biomedical data science as one of its important components, which is possible only because of other informatics work that allows data to be standardized, integrated, and used in various learning models. This issue is focused on biomedical data science and illustrates a broad range of techniques and application areas in this field; articles submitted in response to a specific request for papers are featured in an editorial by Brennan et al. (p. 2). In addition to the articles covered in the editorial, this issue highlights tools and applications of data science in a variety of domains, all of which use clinical text as a source of data: Trivedi (p. 81) presents an interactive tool for processing clinical text, Luo (p. 93) uses convolutional neural networks to classify relations in clinical notes, and Bejan (p. 61) introduces an approach to find homelessness and adverse childhood experiences described in clinical narratives. Additionally, nonclinical text is increasing in importance for health care and public health. Xie (p. 72) uses recurrent neural networks to find e-cigarette adverse events in social media posts, while Vigo (p. 88) describes a method to collect seasonal allergy symptoms for the British population. New types of structured data and new ways to integrate them are also continuously being produced: Doostparasti (p. 99) describes a novel approach for integrating -omics data to enhance phenotype classification performance, and Yu (p. 54) introduces a phenotyping algorithm that does not depend on expert-labeled observations. The articles listed above are only a few examples of the scope of informatics activities covered in JAMIA. Starting with this January issue, readers will be able to easily group articles into themes based on technologies used or application areas. This grouping is made possible by JAMIA’s change in frequency and format (to monthly online), which will allow for more frequent indexing. Readers will be able to compare approaches and discover solutions that are best suited to their problems. Stay tuned for additional data science articles in future monthly issues, as well as articles focused on clinical informatics systems (including clinical decision support), clinical research systems, translational bioinformatics, global public health informatics, and many other subfields of informatics that help us, through information technology, understand and address human health and disease.","PeriodicalId":344533,"journal":{"name":"J. Am. Medical Informatics Assoc.","volume":"50 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"124061804","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
A familiar home, a new beginning, a bright future 一个熟悉的家,一个新的开始,一个光明的未来
Pub Date : 1900-01-01 DOI: 10.1093/jamia/ocu032
D. Fridsma
“We have two ears and one mouth so that we can listen twice as much as we speak.” Epictetus (AD c. 55 – 135) As the new President and CEO of AMIA, I’m excited to begin a journey with the organization that has been my professional home for over 20 years. AMIA is the professional home to informatics researchers, clinicians, implementers, practitioners and health IT professionals who recognize the value of applying informatics knowledge and expertise to the problems of health and health care. I’m proud to be able to serve my colleagues and the field, gently stepping in the shoes of predecessors, Drs. Don E. Detmer, Edward H. Shortliffe, and Kevin M. Fickenscher.Professionally, this is the culmination of my informatics work in academic research, clinical practice, and government service. I come to AMIA after five years with the Office of the National Coordinator for Health Information Technology …
“我们有两只耳朵和一张嘴,所以我们听的是说的两倍。”爱彼泰德(公元55 - 135年)作为AMIA的新任总裁兼首席执行官,我很高兴能与这个20多年来一直是我职业家园的组织开始新的旅程。AMIA是信息学研究人员、临床医生、实施者、从业者和卫生IT专业人员的专业之家,他们认识到将信息学知识和专业知识应用于卫生和卫生保健问题的价值。我很自豪能够为我的同事和这个领域服务,轻轻地踏着前任的脚步。Don E. Detmer, Edward H. Shortliffe和Kevin M. Fickenscher。在专业方面,这是我在学术研究、临床实践和政府服务方面信息学工作的高潮。我在国家卫生信息技术协调办公室工作了五年之后来到AMIA…
{"title":"A familiar home, a new beginning, a bright future","authors":"D. Fridsma","doi":"10.1093/jamia/ocu032","DOIUrl":"https://doi.org/10.1093/jamia/ocu032","url":null,"abstract":"“We have two ears and one mouth so that we can listen twice as much as we speak.” Epictetus (AD c. 55 – 135) \u0000\u0000As the new President and CEO of AMIA, I’m excited to begin a journey with the organization that has been my professional home for over 20 years. AMIA is the professional home to informatics researchers, clinicians, implementers, practitioners and health IT professionals who recognize the value of applying informatics knowledge and expertise to the problems of health and health care. I’m proud to be able to serve my colleagues and the field, gently stepping in the shoes of predecessors, Drs. Don E. Detmer, Edward H. Shortliffe, and Kevin M. Fickenscher.\u0000\u0000Professionally, this is the culmination of my informatics work in academic research, clinical practice, and government service. I come to AMIA after five years with the Office of the National Coordinator for Health Information Technology …","PeriodicalId":344533,"journal":{"name":"J. Am. Medical Informatics Assoc.","volume":"29 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"123810827","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Model Formulation: Requirements for Medical Modeling Languages 模型制定:医学建模语言的要求
Pub Date : 1900-01-01 DOI: 10.1136/jamia.2001.0080146
Arnoud Van Der Maas, A. Hofstede, A. J. T. Hoopen
{"title":"Model Formulation: Requirements for Medical Modeling Languages","authors":"Arnoud Van Der Maas, A. Hofstede, A. J. T. Hoopen","doi":"10.1136/jamia.2001.0080146","DOIUrl":"https://doi.org/10.1136/jamia.2001.0080146","url":null,"abstract":"","PeriodicalId":344533,"journal":{"name":"J. Am. Medical Informatics Assoc.","volume":"73 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"124647169","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 11
期刊
J. Am. Medical Informatics Assoc.
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1