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P450 Electron transfer: Towards in vitro NAD(P)H-independent biocatalysis P450电子转移:迈向体外非NAD(P) h生物催化
IF 3.2 2区 化学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-10-21 DOI: 10.1016/j.jinorgbio.2025.113100
Olivia Paredes, Ava Arabshahi, Jacqueline Hu, Neel Kumar, Vikram Shende, Michael G. Hill, Andrew K. Udit
Oxidation reactions have been studied extensively as their applications are broad, spanning pharmaceuticals, textiles, and fine chemicals. Such reactions can be challenging to perform, particularly on relatively inert C-H bonds; regio- and stereospecificity, as well as overall molecular integrity can be difficult to maintain given the harsh conditions that may be needed. Biocatalysis with cytochromes P450 (P450s) provides a solution to these challenges: a key requirement is providing the enzymes with the necessary reducing equivalents, which naturally comes from NAD(P)H. The complexity of either replicating in vivo systems or providing an enzymatic cofactor recycling system suggests that in vitro, NAD(P)H-independent systems may be a preferred approach, simplifying the system to the key components. Towards this, electrochemical methods have featured prominently, and photochemical approaches have also recently been established as a viable alternative. For those systems that do not utilize a reductase, some mechanistic understanding of the electron transfer involved is critical for achieving native-like catalysis. This focused review tracks the development of these systems, with key examples and findings along the way that lead to a selection of the more recent approaches discussed herein.
氧化反应的应用十分广泛,在制药、纺织、精细化工等领域都得到了广泛的研究。这样的反应很难进行,特别是在相对惰性的碳氢键上;考虑到可能需要的恶劣条件,区域和立体特异性以及整体分子完整性可能难以维持。细胞色素P450 (P450)的生物催化为这些挑战提供了一个解决方案:一个关键的要求是为酶提供必要的还原等量物,这些酶自然来自NAD(P)H。在体内复制系统或提供酶辅因子循环系统的复杂性表明,在体外,不依赖NAD(P) h的系统可能是首选的方法,将系统简化为关键组分。为此,电化学方法具有突出的特点,光化学方法最近也被确立为一种可行的替代方法。对于那些不使用还原酶的系统,对所涉及的电子转移的一些机制的理解对于实现原生催化是至关重要的。这篇重点综述跟踪了这些系统的发展,并在此过程中提供了关键的示例和发现,从而选择了本文讨论的最新方法。
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引用次数: 0
Antilung cancer activity and apoptosis mechanisms of imidazolyl acylhydrazone zinc and europium complexes with chain structures 链结构咪唑酰腙锌铕配合物的抗肺癌活性及细胞凋亡机制。
IF 3.2 2区 化学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-10-17 DOI: 10.1016/j.jinorgbio.2025.113118
Xiaotong Lu , Pan Zhang , Zijie Zhao, Yaqing Xie, Shouying Cao, Minglun Liu, Lili Liang
In this study, a novel bidentate imidazolyl acylhydrazone ligand containing an imidazolyl group was designed, and two novel complexes [ZnL(CH3OH)]·NO3 (1) and [EuL(NO3)2DMF] (2) with a 1D chain structure were synthesized as expected, which shows significantly stronger anti-lung cancer activity than cisplatin. Complexes 1 and 2 effectively inhibit A549 cell proliferation by up-regulating the expression of cytochrome C, cleaved-caspase 3, and Bax, while down-regulating Pro-caspase 3 and Bcl-2 expression, thereby suppressing cell cycle progression and inducing the classical apoptotic pathway. Additionally, these complexes significantly inhibit A549 cell migration. Furthermore, they further elevate intracellular reactive oxygen species (ROS) levels and reduce mitochondrial membrane potential in A549 cells. In vivo anti-tumor evaluations show that complexes 1 and 2 significantly outperform cisplatin in inhibiting the growth of A549 subcutaneous tumors in nude mice, with no apparent damage to major organs. The results of histological examination show that complexes 1 and 2 do not cause obviously pathological damage to the main organs, which further verify their good biosafety in vivo. This study provides a research basis for the research and development of new metal-based drugs with chain structures which show high efficiency and low toxicity.
本研究设计了一种含有咪唑基的新型双齿咪唑酰基腙配体,并如预期合成了两种新型1D链结构的配合物[ZnL(CH3OH)]·NO3(1)和[EuL(NO3)2DMF](2),其抗肺癌活性明显强于顺铂。复合物1和2通过上调细胞色素C、切割型caspase 3和Bax的表达,下调Pro-caspase 3和Bcl-2的表达,有效抑制A549细胞增殖,从而抑制细胞周期进程,诱导经典凋亡途径。此外,这些复合物显著抑制A549细胞的迁移。此外,它们进一步提高细胞内活性氧(ROS)水平,降低A549细胞的线粒体膜电位。体内抗肿瘤评价表明,复合物1和2在抑制裸小鼠A549皮下肿瘤生长方面明显优于顺铂,且对主要器官无明显损伤。组织学检查结果显示复合物1和复合物2对主要器官未造成明显的病理损伤,进一步验证了其良好的体内生物安全性。本研究为开发高效、低毒的新型链式金属基药物提供了研究基础。
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引用次数: 0
Hydroxy-substituted electron deficient Pd porphyrin cofactors illuminate ultrafast proton transfer reactions 羟基取代的缺电子Pd卟啉辅因子阐明了超快质子转移反应
IF 3.2 2区 化学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-10-17 DOI: 10.1016/j.jinorgbio.2025.113116
Jiaqi Zhu , Rui Liu , Jarrett P. Mansergh , Minting Ouyang , Lindsay R. Pederson , Ian Bakanas , William F. DeGrado , Michael J. Therien
Coordinated electron and proton movement drive bioenergetic functions. Relative to electron transfer reactions, tracking proton transport over fast-to-ultrafast time scales is challenging. Optical resolution of proton transfer dynamics can take advantage of chromophoric photoacids that not only trigger proton migration upon photoexcitation, but produce distinct spectroscopic changes associated with protonation/deprotonation. In this work, we report the design of a hydroxy-substituted electron deficient Pd porphyrin, PPd(C6F5)3OH; upon photoexcitation, the acidity constant of this weak acid (pKa = 6.49) dramatically drops (pKa* = 0.97). Electronic excitation of PPd(C6F5)3OH triggers an ultrafast proton transfer reaction (PPd(C6F5)3OH +:B + hυ → 1[PPd(C6F5)3OH]* +:B → 1[PPd(C6F5)3O]* + HB+; τPT = 342 fs) to a H-bonded base (B) in solution. Both PPd(C6F5)3OH and its conjugate anion PPd(C6F5)3O exhibit distinct vis-NIR spectral features for their respective ground and excited states. Because the electroni-cally excited triplet lifetimes of these species exceed tens of microseconds, the PPd(C6F5)3OH photoacid defines an ideal cofactor to probe light-triggered proton release and track long-range proton migration in protein environments.
电子和质子的协调运动驱动生物能量功能。相对于电子转移反应,在快到超快的时间尺度上跟踪质子输运是具有挑战性的。质子转移动力学的光学分辨率可以利用发色光酸,它不仅在光激发下触发质子迁移,而且在质子化/去质子化过程中产生明显的光谱变化。在这项工作中,我们报道了一个羟基取代的缺电子Pd卟啉的设计,PPd(C6F5)3OH;光激发后,该弱酸(pKa = 6.49)的酸度常数急剧下降(pKa* = 0.97)。电子激发PPd(C6F5)3OH引发超快质子转移反应(PPd(C6F5)3OH +:B + hυ→1[PPd(C6F5)3OH]* +:B→1[PPd(C6F5) 30o]−* + HB+);τPT = 342 fs)在溶液中形成h键碱(B)。PPd(C6F5)3OH及其共轭阴离子PPd(C6F5) 30o−在各自的基态和激发态表现出明显的可见光-近红外光谱特征。由于这些物种的电子激发三重态寿命超过数十微秒,PPd(C6F5)3OH光酸定义了一个理想的辅助因子,用于探测光触发的质子释放和跟踪蛋白质环境中的远程质子迁移。
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引用次数: 0
The cytochrome P450 decarboxylase from Staphylococcus aureus can produce a diene from a C18 monounsaturated fatty acid: A spectroscopic, structural and kinetic characterisation 来自金黄色葡萄球菌的细胞色素P450脱羧酶可以从C18单不饱和脂肪酸中产生二烯:光谱,结构和动力学表征。
IF 3.2 2区 化学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-10-16 DOI: 10.1016/j.jinorgbio.2025.113117
Lewis J. Williams , Michael T. Wilson , James A. Birrell , Harry W. Lang , Stephen G. Bell , Jonathan A.R. Worrall
Certain members of the bacterial cytochrome P450 152 family (CYP152) are peroxygenases that catalyse the decarboxylation of fatty acids into terminal olefins making them attractive biocatalysts for biofuel production. To date, the characterisation of decarboxylating CYP152s has mainly focused on their reaction with saturated fatty acid substrates. CYP152s are often co-purified with a bound substrate, which is generally removed before further experiments are conducted. In the present work we identified that heterologous over-expressed CYP152 from Staphylococcus aureus (OleTSa) is co-purified with the trans-monounsaturated C18:1 fatty acid, elaidic acid. We report the spectral, thermodynamic and kinetic characteristics of OleTSa bound to both elaidic acid and its saturated counterpart, stearic acid. Despite differing spectral profiles, metabolic and kinetic studies reveal that OleTSa is capable of decarboxylating elaidic acid, converting it to heptadeca-1,8-diene following addition of hydrogen peroxide, at the same rate and chemoselectivity as the conversion of stearic acid to 1-heptadecane. The X-ray crystal structure of the as purified OleTSa in complex with elaidic acid is also presented, allowing for several key residues to be identified for site-directed mutagenesis studies. The influence of the site-directed variants on C18:0 and C18:1 product formation, binding thermodynamics and kinetics have been investigated, showing that while spectral differences occur as a likely result of perturbing the binding pocket, this does not alter the chemoselectivity of the enzyme. Our work provides important insights into the mechanism of decarboxylation of an unsaturated fatty acid substrate by OleTSa potentially expanding the sustainable substrate space available for CYP152s.
细菌细胞色素P450 152家族(CYP152)的某些成员是过氧化酶,催化脂肪酸脱羧成末端烯烃,使其成为生物燃料生产的有吸引力的生物催化剂。迄今为止,对脱羧CYP152s的表征主要集中在它们与饱和脂肪酸底物的反应上。CYP152s通常与结合底物共纯化,通常在进行进一步实验之前将其去除。在目前的工作中,我们发现来自金黄色葡萄球菌(OleTSa)的异源过表达CYP152与反式单不饱和脂肪酸C18:1, elaidic酸共纯化。我们报道了OleTSa与硬脂酸及其饱和对应物硬脂酸结合的光谱、热力学和动力学特性。尽管光谱分布不同,但代谢和动力学研究表明,OleTSa能够使硬脂酸脱羧,在加入过氧化氢后将其转化为十七烷-1,8-二烯,其速率和化学选择性与硬脂酸转化为1-十七烷相同。此外,还展示了与elaidi酸配合物纯化的OleTSa的x射线晶体结构,从而确定了用于定点诱变研究的几个关键残基。位点导向变异对C18:0和C18:1产物形成、结合热力学和动力学的影响已经进行了研究,表明虽然光谱差异可能是干扰结合袋的结果,但这不会改变酶的化学选择性。我们的工作为OleTSa对不饱和脂肪酸底物脱羧的机制提供了重要的见解,这可能会扩大cyp152可利用的可持续底物空间。
{"title":"The cytochrome P450 decarboxylase from Staphylococcus aureus can produce a diene from a C18 monounsaturated fatty acid: A spectroscopic, structural and kinetic characterisation","authors":"Lewis J. Williams ,&nbsp;Michael T. Wilson ,&nbsp;James A. Birrell ,&nbsp;Harry W. Lang ,&nbsp;Stephen G. Bell ,&nbsp;Jonathan A.R. Worrall","doi":"10.1016/j.jinorgbio.2025.113117","DOIUrl":"10.1016/j.jinorgbio.2025.113117","url":null,"abstract":"<div><div>Certain members of the bacterial cytochrome P450 152 family (CYP152) are peroxygenases that catalyse the decarboxylation of fatty acids into terminal olefins making them attractive biocatalysts for biofuel production. To date, the characterisation of decarboxylating CYP152s has mainly focused on their reaction with saturated fatty acid substrates. CYP152s are often co-purified with a bound substrate, which is generally removed before further experiments are conducted. In the present work we identified that heterologous over-expressed CYP152 from <em>Staphylococcus aureus</em> (OleT<sub>Sa</sub>) is co-purified with the <em>trans</em>-monounsaturated C<sub>18:1</sub> fatty acid, elaidic acid. We report the spectral, thermodynamic and kinetic characteristics of OleT<sub>Sa</sub> bound to both elaidic acid and its saturated counterpart, stearic acid. Despite differing spectral profiles, metabolic and kinetic studies reveal that OleT<sub>Sa</sub> is capable of decarboxylating elaidic acid, converting it to heptadeca-1,8-diene following addition of hydrogen peroxide, at the same rate and chemoselectivity as the conversion of stearic acid to 1-heptadecane. The X-ray crystal structure of the as purified OleT<sub>Sa</sub> in complex with elaidic acid is also presented, allowing for several key residues to be identified for site-directed mutagenesis studies. The influence of the site-directed variants on C<sub>18:0</sub> and C<sub>18:1</sub> product formation, binding thermodynamics and kinetics have been investigated, showing that while spectral differences occur as a likely result of perturbing the binding pocket, this does not alter the chemoselectivity of the enzyme. Our work provides important insights into the mechanism of decarboxylation of an unsaturated fatty acid substrate by OleT<sub>Sa</sub> potentially expanding the sustainable substrate space available for CYP152s.</div></div>","PeriodicalId":364,"journal":{"name":"Journal of Inorganic Biochemistry","volume":"275 ","pages":"Article 113117"},"PeriodicalIF":3.2,"publicationDate":"2025-10-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145342434","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Oxidizable amino acids around cytochrome P450 hemes 细胞色素P450血红素周围的可氧化氨基酸。
IF 3.2 2区 化学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-10-16 DOI: 10.1016/j.jinorgbio.2025.113119
Jay R. Winkler
Cytochrome P450 enzymes (also designated with the prefix CYP) catalyze oxygenation reactions on a wide array of organic substrates. The reaction cycle involves two high-potential intermediates that are oxidized one and two electrons above the resting enzyme. We have suggested that hole transfer along chains of tryptophan, tyrosine, and cysteine residues can prevent enzyme damage by these intermediates when reaction with substrate fails. This work is an examination of the distributions of tryptophan, tyrosine, and cysteine residues closest to the heme in the structures of 188 P450 enzymes. Tyrosine residues tend to be closest in bacterial enzymes, whereas tryptophan residues dominate in eukaryotic enzymes. A tryptophan residue hydrogen-bonded to the D-propionate of the heme is a common structural motif in eukaryotes. A tryptophan in a similar location in the bacterial CYP102A1 enzyme has been shown in prior work to extend the lifetime of the enzyme during turnover. The eukaryotic tryptophan residues might perform a similar protective role.
细胞色素P450酶(也以CYP前缀命名)在广泛的有机底物上催化氧化反应。这个反应循环涉及两个高电位的中间产物,它们在静止的酶上被氧化了一个和两个电子。我们已经提出,当与底物反应失败时,沿色氨酸、酪氨酸和半胱氨酸残基链的空穴转移可以防止这些中间体对酶的损伤。这项工作是对188 P450酶结构中最接近血红素的色氨酸、酪氨酸和半胱氨酸残基分布的检查。酪氨酸残基在细菌酶中最接近,而色氨酸残基在真核酶中占主导地位。色氨酸残基与血红素d -丙酸的氢键结合是真核生物中常见的结构基序。在之前的工作中,在细菌CYP102A1酶中类似位置的色氨酸已被证明可以延长酶在周转期间的寿命。真核色氨酸残基可能具有类似的保护作用。
{"title":"Oxidizable amino acids around cytochrome P450 hemes","authors":"Jay R. Winkler","doi":"10.1016/j.jinorgbio.2025.113119","DOIUrl":"10.1016/j.jinorgbio.2025.113119","url":null,"abstract":"<div><div>Cytochrome P450 enzymes (also designated with the prefix CYP) catalyze oxygenation reactions on a wide array of organic substrates. The reaction cycle involves two high-potential intermediates that are oxidized one and two electrons above the resting enzyme. We have suggested that hole transfer along chains of tryptophan, tyrosine, and cysteine residues can prevent enzyme damage by these intermediates when reaction with substrate fails. This work is an examination of the distributions of tryptophan, tyrosine, and cysteine residues closest to the heme in the structures of 188 P450 enzymes. Tyrosine residues tend to be closest in bacterial enzymes, whereas tryptophan residues dominate in eukaryotic enzymes. A tryptophan residue hydrogen-bonded to the D-propionate of the heme is a common structural motif in eukaryotes. A tryptophan in a similar location in the bacterial CYP102A1 enzyme has been shown in prior work to extend the lifetime of the enzyme during turnover. The eukaryotic tryptophan residues might perform a similar protective role.</div></div>","PeriodicalId":364,"journal":{"name":"Journal of Inorganic Biochemistry","volume":"275 ","pages":"Article 113119"},"PeriodicalIF":3.2,"publicationDate":"2025-10-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145353404","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Examining Pseudohalide (N3, NCS, NCO) Coordination in Nonheme Fe(II) and Fe(III) Complexes 非血红素铁(II)和铁(III)配合物中假卤化物(N3, NCS, NCO)配位的研究
IF 3.2 2区 化学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-10-15 DOI: 10.1016/j.jinorgbio.2025.113107
Vishal Yadav, Maxime A. Siegler, David P. Goldberg
Pseudohalide ligands (N3, NCS, NCO) have emerged as valuable probes for studying nonheme iron halogenase reactivity due to their halogen-like behavior and distinct infrared (IR) spectroscopic signatures. Here, we present a systematic structural and vibrational analysis of a series of Fe(II) and Fe(III) complexes ligated by pseudohalides within a consistent tetradentate N₄O ligand framework (BNPAPh2O, BNPAPh(p-F)2O, and DPAPh2O). Single-crystal X-ray diffraction and IR spectroscopy reveal how variations in oxidation state, hydrogen bonding, trans ligands, and ligand electronics modulate Fe–X (X = N3, NCS, NCO) bond lengths, angles, and stretching frequencies. While hydrogen bonding induces significant geometric distortions, it has minimal impact on azide vibrational energies. In contrast, subtle electronic modifications and trans ligand effects yield measurable shifts in vibrational frequencies, especially for NCS and NCO. Notably, axial versus equatorial ligand positioning leads to consistent vibrational splitting, enabling confident spectroscopic assignment of pseudohalide orientation. Oxidation state studies reveal a blue shift in ν(N3) from Fe(II) to Fe(III), while NCS shows a red shift and NCO remains largely unaffected. These findings establish pseudohalides as vibrational reporters of coordination environment in nonheme iron systems and offer a foundation for their use in mechanistic studies of metalloenzymes and bioinspired catalysis.
假卤化物配体(N3−,NCS−,NCO−)由于其类卤素行为和明显的红外光谱特征而成为研究非血红素铁卤化酶反应性的有价值的探针。在这里,我们提出了一个系统的结构和振动分析的一系列Fe(II)和Fe(III)配合物连接的假卤化物在一致的四齿N₄O配体框架(BNPAPh2O−,BNPAPh(p-F)2O−和DPAPh2O−)。单晶X射线衍射和红外光谱揭示了氧化态、氢键、反式配体和配体电子学的变化如何调节Fe-X (X = N3、NCS、NCO)的键长、角度和拉伸频率。虽然氢键引起显著的几何畸变,但它对叠氮化物振动能的影响很小。相比之下,细微的电子修饰和反式配体效应会产生可测量的振动频率变化,特别是对于NCS和NCO。值得注意的是,轴向与赤道配体定位导致一致的振动分裂,使伪卤化物取向的光谱分配更加可靠。氧化态研究表明,ν(N3)从Fe(II)到Fe(III)发生蓝移,而NCS则发生红移,而NCO基本未受影响。这些发现确立了假卤化物作为非血红素铁系统中配位环境的振动报告者,并为其在金属酶和生物激发催化机制研究中的应用奠定了基础。
{"title":"Examining Pseudohalide (N3, NCS, NCO) Coordination in Nonheme Fe(II) and Fe(III) Complexes","authors":"Vishal Yadav,&nbsp;Maxime A. Siegler,&nbsp;David P. Goldberg","doi":"10.1016/j.jinorgbio.2025.113107","DOIUrl":"10.1016/j.jinorgbio.2025.113107","url":null,"abstract":"<div><div>Pseudohalide ligands (N<sub>3</sub><sup>−</sup>, NCS<sup>−</sup>, NCO<sup>−</sup>) have emerged as valuable probes for studying nonheme iron halogenase reactivity due to their halogen-like behavior and distinct infrared (IR) spectroscopic signatures. Here, we present a systematic structural and vibrational analysis of a series of Fe(II) and Fe(III) complexes ligated by pseudohalides within a consistent tetradentate N₄O ligand framework (BNPA<sup>Ph<sub>2</sub></sup>O<sup>−</sup>, BNPA<sup>Ph<em>(p-F)<sub>2</sub></em></sup>O<sup>−</sup>, and DPA<sup>Ph<sub>2</sub></sup>O<sup>−</sup>). Single-crystal X-ray diffraction and IR spectroscopy reveal how variations in oxidation state, hydrogen bonding, trans ligands, and ligand electronics modulate Fe–X (X = N<sub>3</sub>, NCS, NCO) bond lengths, angles, and stretching frequencies. While hydrogen bonding induces significant geometric distortions, it has minimal impact on azide vibrational energies. In contrast, subtle electronic modifications and trans ligand effects yield measurable shifts in vibrational frequencies, especially for NCS and NCO. Notably, axial versus equatorial ligand positioning leads to consistent vibrational splitting, enabling confident spectroscopic assignment of pseudohalide orientation. Oxidation state studies reveal a blue shift in ν(N<sub>3</sub>) from Fe(II) to Fe(III), while NCS shows a red shift and NCO remains largely unaffected. These findings establish pseudohalides as vibrational reporters of coordination environment in nonheme iron systems and offer a foundation for their use in mechanistic studies of metalloenzymes and bioinspired catalysis.</div></div>","PeriodicalId":364,"journal":{"name":"Journal of Inorganic Biochemistry","volume":"275 ","pages":"Article 113107"},"PeriodicalIF":3.2,"publicationDate":"2025-10-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145463274","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synthesis, structural characterization, in vitro and in vivo antitumor activities of Pt(II) complexes with di(pyridin-2-yl)methanone − hydrazone derivatives Pt(II)与二(吡啶-2-基)甲烷腙衍生物配合物的合成、结构表征及体内体外抗肿瘤活性研究
IF 3.2 2区 化学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-10-14 DOI: 10.1016/j.jinorgbio.2025.113114
Hai-Qun Zhang , Nan-Feng Chen , Hui-Chao Lin , Muhammad Iqbal Choudhary , Hong Liang , Zhen-Feng Chen
Six Pt(II) complexes bearing di(pyridin-2-yl)methanone hydrazone derivative ligands (Pt1 − Pt6) were synthesized and characterized. These complexes exhibited promising antiproliferative activity against multiple cancer cell lines, with low cytotoxicity toward normal human cells. Among them, Pt4 and Pt6 demonstrated the strongest inhibition of A2780 cell proliferation. Mechanistic studies revealed that Pt4 and Pt6 induce apoptosis via mitochondrial dysfunction, accumulation of intracellular Ca2+ and reactive oxygen species, and activation of caspase-3/9. Importantly, Pt4, the most potent agent against A2780 cells, displayed superior antitumor efficacy compared to cisplatin in an A2780 xenograft model, with no significant systemic toxicity.
合成了六种含二(吡啶-2-基)甲烷腙衍生物配体(Pt1 - Pt6)的Pt(II)配合物,并对其进行了表征。这些复合物对多种癌细胞具有良好的抗增殖活性,对正常人类细胞具有较低的细胞毒性。其中,Pt4和Pt6对A2780细胞增殖的抑制作用最强。机制研究表明,Pt4和Pt6通过线粒体功能障碍、细胞内Ca2+和活性氧的积累以及caspase-3/9的激活诱导细胞凋亡。重要的是,与顺铂相比,Pt4作为抗A2780细胞最有效的药物,在A2780异种移植模型中显示出更好的抗肿瘤功效,且无明显的全身毒性。
{"title":"Synthesis, structural characterization, in vitro and in vivo antitumor activities of Pt(II) complexes with di(pyridin-2-yl)methanone − hydrazone derivatives","authors":"Hai-Qun Zhang ,&nbsp;Nan-Feng Chen ,&nbsp;Hui-Chao Lin ,&nbsp;Muhammad Iqbal Choudhary ,&nbsp;Hong Liang ,&nbsp;Zhen-Feng Chen","doi":"10.1016/j.jinorgbio.2025.113114","DOIUrl":"10.1016/j.jinorgbio.2025.113114","url":null,"abstract":"<div><div>Six Pt(II) complexes bearing di(pyridin-2-yl)methanone hydrazone derivative ligands (<strong>Pt1 − Pt6</strong>) were synthesized and characterized. These complexes exhibited promising antiproliferative activity against multiple cancer cell lines, with low cytotoxicity toward normal human cells. Among them, <strong>Pt4</strong> and <strong>Pt6</strong> demonstrated the strongest inhibition of A2780 cell proliferation. Mechanistic studies revealed that <strong>Pt4</strong> and <strong>Pt6</strong> induce apoptosis <em>via</em> mitochondrial dysfunction, accumulation of intracellular Ca<sup>2+</sup> and reactive oxygen species, and activation of caspase-3/9. Importantly, <strong>Pt4</strong>, the most potent agent against A2780 cells, displayed superior antitumor efficacy compared to cisplatin in an A2780 xenograft model, with no significant systemic toxicity.</div></div>","PeriodicalId":364,"journal":{"name":"Journal of Inorganic Biochemistry","volume":"275 ","pages":"Article 113114"},"PeriodicalIF":3.2,"publicationDate":"2025-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145317963","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Heme and CO metabolism by the canonical human heme oxygenases 血红素加氧酶对血红素和一氧化碳的代谢
IF 3.2 2区 化学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-10-14 DOI: 10.1016/j.jinorgbio.2025.113111
Angela S. Fleischhacker , Juan Blume-La-Torre , Kierra Pendill , Keion Dozier, Stephen W. Ragsdale
Heme is an essential biomolecule and cofactor that participates in many different biological processes by binding to a diverse group of proteins to affect structure, function, and regulation. Yet, heme becomes toxic to human cells when its levels are elevated. As will be the focus of this review, the major route of heme detoxification in humans is through the heme degradation pathway involving heme oxygenase (HO). Humans, as well as other amniotes, express two isoforms of HO, HO1 and HO2, and understanding the role each isoform plays in regulating heme homeostasis is of great interest. Recently, a role for HO2 in sequestering, rather than degrading, heme has been uncovered. Here, we highlight this role of HO2 and place it in context of how, when, and why heme degradation proceeds, including the regulation of HO activity by the other necessary components of the reaction: oxygen and electrons from NAPDH via cytochrome P450 reductase. In addition, we review the significant roles the products of heme degradation (biliverdin, iron, and carbon monoxide) play in human health. Therefore, HO has many spheres of influence centered around substrates and products of the reaction, signifying the wide-reaching effects of heme degradation and sequestration.
血红素是一种重要的生物分子和辅助因子,通过与多种蛋白质结合来影响结构、功能和调控,参与许多不同的生物过程。然而,当血红素水平升高时,它就会对人体细胞产生毒性。本文将重点介绍人体血红素解毒的主要途径是通过血红素氧化酶(HO)降解途径。人类和其他羊膜动物表达HO、HO1和HO2两种同工异构体,了解每种同工异构体在调节血红素稳态中的作用具有重要意义。最近,HO2在隔离而不是降解血红素中的作用被发现。在这里,我们强调了HO2的作用,并将其置于血红素降解如何,何时以及为什么进行的背景下,包括反应的其他必要成分对HO活性的调节:通过细胞色素P450还原酶来自NAPDH的氧和电子。此外,我们回顾了血红素降解产物(胆绿素、铁和一氧化碳)在人体健康中的重要作用。因此,HO具有以底物和反应产物为中心的许多影响范围,表明血红素降解和封存的影响范围广泛。
{"title":"Heme and CO metabolism by the canonical human heme oxygenases","authors":"Angela S. Fleischhacker ,&nbsp;Juan Blume-La-Torre ,&nbsp;Kierra Pendill ,&nbsp;Keion Dozier,&nbsp;Stephen W. Ragsdale","doi":"10.1016/j.jinorgbio.2025.113111","DOIUrl":"10.1016/j.jinorgbio.2025.113111","url":null,"abstract":"<div><div>Heme is an essential biomolecule and cofactor that participates in many different biological processes by binding to a diverse group of proteins to affect structure, function, and regulation. Yet, heme becomes toxic to human cells when its levels are elevated. As will be the focus of this review, the major route of heme detoxification in humans is through the heme degradation pathway involving heme oxygenase (HO). Humans, as well as other amniotes, express two isoforms of HO, HO1 and HO2, and understanding the role each isoform plays in regulating heme homeostasis is of great interest. Recently, a role for HO2 in sequestering, rather than degrading, heme has been uncovered. Here, we highlight this role of HO2 and place it in context of how, when, and why heme degradation proceeds, including the regulation of HO activity by the other necessary components of the reaction: oxygen and electrons from NAPDH via cytochrome P450 reductase. In addition, we review the significant roles the products of heme degradation (biliverdin, iron, and carbon monoxide) play in human health. Therefore, HO has many spheres of influence centered around substrates and products of the reaction, signifying the wide-reaching effects of heme degradation and sequestration.</div></div>","PeriodicalId":364,"journal":{"name":"Journal of Inorganic Biochemistry","volume":"275 ","pages":"Article 113111"},"PeriodicalIF":3.2,"publicationDate":"2025-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145323566","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The role of conserved elements in an active site α-helix of coproheme decarboxylase 铜原血红素脱羧酶活性位点α-螺旋中保守元件的作用。
IF 3.2 2区 化学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-10-14 DOI: 10.1016/j.jinorgbio.2025.113101
Avery Carriuolo , Shelby Parrott , Olivia Bauer , Clayton Pritchett , Mika Baltes , Robert S. Phillips , William N. Lanzilotta
The final step in the coproporphyrin-dependent (CPD) branch of the heme biosynthesis pathway involves the oxidative decarboxylation of coproheme to form heme b. This reaction, catalyzed by coproheme decarboxylase (ChdC), requires two equivalents of hydrogen peroxide to complete the synthesis of one b-type heme molecule. The CPD pathway is limited to Gram-positive bacteria and some archaea, and the precise mechanism of ChdC differs between Firmicutes and Actinobacteria. These variations highlight the importance of studying ChdCs from diverse organisms. The reaction proceeds through two sequential oxidative decarboxylations via the intermediate monovinyl monopropionate deuteroheme (MMD). Previous studies suggest that MMD does not exit the active site but instead undergoes a 90-degree rotation before another equivalent of hydrogen peroxide binds and initiates the second oxidative decarboxylation. This mechanism requires a high degree of specificity to distinguish between substrate, intermediate, and final product. To further understand this selectivity, we present biochemical and structural analyses of wild-type and variant forms of ChdC from Streptomyces coelicolor (ScChdC). We hypothesize that a conserved active site element within an alpha helix contributes to porphyrin specificity/selectivity and conformation and investigate how this influences an active site loop. Our data provides new insight into the role of this loop in substrate recognition, rotation, and catalysis. The substrate selectivity model for ChdC developed in this study will inform future mechanistic investigations and provide insights into key functional interfaces, highlighting potential targets for drug development.
血红素生物合成途径中co - proporphyin -dependent (CPD)分支的最后一步是co - proheme的氧化脱羧形成血红素b。该反应由co - proheme decarboxylase (ChdC)催化,需要两个等量的过氧化氢来完成一个b型血红素分子的合成。CPD途径仅限于革兰氏阳性菌和一些古细菌,而ChdC的确切机制在厚壁菌门和放线菌门之间存在差异。这些差异突出了研究来自不同生物的chdc的重要性。该反应通过两个连续的氧化脱羧反应进行,通过中间的单丙酸单血红素(MMD)。先前的研究表明,在另一等量的过氧化氢结合并启动第二次氧化脱羧之前,MMD不会退出活性位点,而是进行90度旋转。这种机制需要高度的特异性来区分底物、中间产物和最终产物。为了进一步了解这种选择性,我们对野生型和变型链霉菌(ScChdC)的ChdC进行了生化和结构分析。我们假设α螺旋中的保守活性位点元件有助于卟啉的特异性/选择性和构象,并研究这如何影响活性位点环。我们的数据为该环在底物识别、旋转和催化中的作用提供了新的见解。本研究建立的ChdC底物选择性模型将为未来的机制研究提供信息,并为关键功能界面提供见解,突出药物开发的潜在靶点。
{"title":"The role of conserved elements in an active site α-helix of coproheme decarboxylase","authors":"Avery Carriuolo ,&nbsp;Shelby Parrott ,&nbsp;Olivia Bauer ,&nbsp;Clayton Pritchett ,&nbsp;Mika Baltes ,&nbsp;Robert S. Phillips ,&nbsp;William N. Lanzilotta","doi":"10.1016/j.jinorgbio.2025.113101","DOIUrl":"10.1016/j.jinorgbio.2025.113101","url":null,"abstract":"<div><div>The final step in the coproporphyrin-dependent (CPD) branch of the heme biosynthesis pathway involves the oxidative decarboxylation of coproheme to form heme b. This reaction, catalyzed by coproheme decarboxylase (ChdC), requires two equivalents of hydrogen peroxide to complete the synthesis of one b-type heme molecule. The CPD pathway is limited to Gram-positive bacteria and some archaea, and the precise mechanism of ChdC differs between Firmicutes and Actinobacteria. These variations highlight the importance of studying ChdCs from diverse organisms. The reaction proceeds through two sequential oxidative decarboxylations via the intermediate monovinyl monopropionate deuteroheme (MMD). Previous studies suggest that MMD does not exit the active site but instead undergoes a 90-degree rotation before another equivalent of hydrogen peroxide binds and initiates the second oxidative decarboxylation. This mechanism requires a high degree of specificity to distinguish between substrate, intermediate, and final product. To further understand this selectivity, we present biochemical and structural analyses of wild-type and variant forms of ChdC from <em>Streptomyces coelicolor</em> (<em>Sc</em>ChdC). We hypothesize that a conserved active site element within an alpha helix contributes to porphyrin specificity/selectivity and conformation and investigate how this influences an active site loop. Our data provides new insight into the role of this loop in substrate recognition, rotation, and catalysis. The substrate selectivity model for ChdC developed in this study will inform future mechanistic investigations and provide insights into key functional interfaces, highlighting potential targets for drug development.</div></div>","PeriodicalId":364,"journal":{"name":"Journal of Inorganic Biochemistry","volume":"274 ","pages":"Article 113101"},"PeriodicalIF":3.2,"publicationDate":"2025-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145312045","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Metal ions control amyloid catalysis 金属离子控制淀粉样蛋白催化。
IF 3.2 2区 化学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-10-14 DOI: 10.1016/j.jinorgbio.2025.113112
Fiamma Ayelen Buratti , Ranjeet Kumar , Pernilla Wittung-Stafshede
Pathological amyloids, such as those formed by the protein α-synuclein in Parkinson's disease, have recently been shown to catalyze hydrolysis of ester and phosphoester bonds in vitro. Here, we report that this activity is modulated by divalent metal ions copper (Cu(II)) and zinc (Zn(II)). Specifically, α-synuclein amyloids formed in the presence of Zn(II) are catalytically inactive towards dephosphorylation of adenosine triphosphate (ATP) and cannot bind a fluorescent analog of ATP. In contrast, amyloids formed in the presence of Cu(II) retain catalytic activity towards ATP that is comparable to that of amyloids formed without metal ions. Amyloids of the α-synuclein variant with histidine at position 50 replaced by alanine (H50A) are inactive in catalyzing ATP hydrolysis independent of Zn(II); however, when these amyloids are formed in the presence of Cu(II), catalytic activity and ATP binding is restored. For lipase activity on a model substrate, both wild-type and H50A α-synuclein amyloids are catalytically active regardless of Cu(II), whereas amyloids of both variants formed in the presence of Zn(II) exhibit no such activity. In sharp contrast, hydrolysis of para-nitrophenyl acetate (pNPA) is insensitive to both metal ions and H50A mutation in the amyloids. Given the common occurrence of metal ion dysregulation in neurodegenerative disorders, and the propensity of many amyloidogenic proteins to bind metal ions, our findings imply that amyloid catalytic activity may be modulated by metal ions in vivo.
病理性淀粉样蛋白,如帕金森病中由α-突触核蛋白形成的淀粉样蛋白,最近在体外被证明可以催化酯和磷酸键的水解。在这里,我们报告了这种活性是由二价金属离子铜(Cu(II))和锌(Zn(II))调节的。具体来说,在Zn(II)存在下形成的α-突触核蛋白淀粉样蛋白对三磷酸腺苷(ATP)的去磷酸化没有催化活性,也不能结合ATP的荧光类似物。相反,在Cu(II)存在下形成的淀粉样蛋白保留了对ATP的催化活性,与没有金属离子形成的淀粉样蛋白相当。50位组氨酸被丙氨酸(H50A)取代的α-突触核蛋白变体的淀粉样蛋白不依赖Zn(II)催化ATP水解;然而,当这些淀粉样蛋白在Cu(II)存在下形成时,催化活性和ATP结合得以恢复。对于模型底物上的脂肪酶活性,无论Cu(II)是否存在,野生型和H50A α-突触核蛋白淀粉样蛋白都具有催化活性,而在Zn(II)存在下形成的两种变体的淀粉样蛋白都没有这种活性。与之形成鲜明对比的是,对硝基苯乙酸酯(pNPA)的水解对金属离子和淀粉样蛋白中的H50A突变都不敏感。鉴于金属离子失调在神经退行性疾病中的普遍存在,以及许多淀粉样蛋白结合金属离子的倾向,我们的研究结果表明,体内的淀粉样蛋白催化活性可能受到金属离子的调节。
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Journal of Inorganic Biochemistry
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