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Establishing obstetrics-specific metrics and interventions for antimicrobial stewardship 为抗菌药物管理建立产科特定指标和干预措施
Q3 Medicine Pub Date : 2023-09-18 DOI: 10.3138/jammi-2022-0032
Jeffrey Man Hay Wong, Denise J Wooding, Sarah E Leung, Vanessa Paquette, Ashley Roberts, Chelsea Elwood
Background: To describe baseline antimicrobial stewardship (AMS) metrics and apply AMS interventions in an inpatient obstetrical population. Methods: From October 2018 to October 2019, our tertiary-care obstetrical center reviewed components of our AMS program, which included: (1) antimicrobial consumption data, (2) point prevalence surveys (PPS), and (3) prospective audit and feedback. We reviewed institutional data for antimicrobial consumption from the pharmacy database. Detailed point prevalence surveys were conducted for all antimicrobial prescriptions on two predefined dates each month. Daily audits and feedback assessed the appropriateness of all non-protocolized antimicrobials. Results: Our average antimicrobial length of therapy (LOT) was 12 days per 100 patient-days, where erythromycin (2.33), amoxicillin (2.28), and ampicillin (1.81) were the greatest contributors. Point prevalence surveys revealed that 28.8% of obstetrical inpatients were on antimicrobials, of which 11.2% were inappropriate. Protocolized antimicrobials were 62% less likely ( p = 0.027) to be inappropriate. From 565 audited prescriptions, 110 (19.5%) resulted in feedback, where 90% of recommendations were accepted and implemented. The most common reasons for interventions include incorrect dosage, recommending a diagnostic test before continuing antimicrobials, and changing antimicrobials based on specific culture and sensitivity. Conclusions: Antimicrobial use in obstetrics is unique compared to general inpatients. We provide a baseline set of metrics for AMS at our obstetrical center intending to lay the groundwork for AMS programming in our discipline. Antimicrobial protocolization, as well as audit and feedback, are feasible interventions to improve antimicrobial prescribing patterns.
背景:描述基线抗菌药物管理(AMS)指标和应用AMS干预在住院产科人群。方法:2018年10月至2019年10月,我们的三级保健产科中心回顾了我们的AMS项目的组成部分,包括:(1)抗菌药物消费数据,(2)点患病率调查(PPS),(3)前瞻性审计和反馈。我们回顾了药房数据库中抗菌药物使用的机构数据。在每个月预定义的两个日期对所有抗菌药物处方进行详细的点患病率调查。每日审计和反馈评估了所有非规程抗菌药物的适宜性。结果:我们的平均抗菌药物治疗时间(LOT)为12天/ 100患者日,其中红霉素(2.33)、阿莫西林(2.28)和氨苄西林(1.81)贡献最大。点状流行病学调查显示,28.8%的产科住院患者使用了抗菌药物,其中11.2%的患者使用不当。方案规定的抗菌素不适当的可能性降低62% (p = 0.027)。在565张审核处方中,110张(19.5%)产生了反馈,其中90%的建议被接受和实施。干预措施最常见的原因包括剂量不正确,在继续使用抗菌素之前建议进行诊断测试,以及根据特定培养和敏感性改变抗菌素。结论:与普通住院患者相比,产科的抗菌药物使用具有独特性。我们在我们的产科中心为AMS提供了一套基线指标,旨在为我们学科的AMS编程奠定基础。抗菌药物协议以及审计和反馈是改善抗菌药物处方模式的可行干预措施。
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引用次数: 0
The pitfalls of mass hospital health care worker testing for COVID-19. 大规模医院卫生保健工作者COVID-19检测的陷阱。
Q3 Medicine Pub Date : 2020-10-11 eCollection Date: 2020-10-01 DOI: 10.3138/jammi-2020-06-17
Dominik Mertz, Gerald A Evans, Susy Hota
On May 29, 2020, Ontario released an ambitious plan, “Protecting Ontarians through Enhanced Testing,” [1] for COVID-19. The approach included testing asymptomatic individuals who are at risk for infection due to suspected exposure or at-risk occupations and targeted testing campaigns for high-risk populations. Shortly thereafter, several Ontario hospitals were requested to conduct comprehensive health care worker (HCW) asymptomatic testing for COVID-19. While on the surface, broad testing of HCWs for COVID-19 seems to have merit, a deeper look raises questions regarding the rationale, effectiveness, and potential harms of this endeavour. To understand the rationale for targeting hospital HCWs for mass, asymptomatic testing, we must first ask what question we seek to answer by carrying out this testing. If the goal is to derive an estimate of community prevalence of COVID-19, hospital HCWs may or may not be representative of the general public. As a result, are we asserting that HCWs are at extremely high risk for acquiring COVID-19 despite personal protective equipment (PPE) use and are therefore driving community transmission? Studies to date have not suggested a significantly higher incidence of COVID-19 infection in acute hospital HCWs compared to the community, outside of outbreak settings [2–4]. Indiscriminate testing of asymptomatic HCWs is challenging to interpret. When asymptomatic persons test positive for COVID-19, we identify four groups with differing levels of infectious risk. In descending order, they are [1] those who are pre-symptomatic, [2] those who have a completely asymptomatic course of infection, [3] those who are recovering from infection, and [4] those with a false-positive test result. While pre-symptomatic individuals are likely as infectious as symptomatic individuals, this group will be a small minority of the true positive cases given that our current polymerase chain Dominik Mertz MD, MSc1, Gerald A Evans MD2, Susy Hota MD, MSc3 on behalf of the Ontario Infection Prevention and Control Community of Practice (see list) 1Hamilton Health Sciences Centre & McMaster University, Hamilton, Ontario; 2Kingston Health Sciences Centre & Queen’s University, Kingston, Ontario; 3University Health Network & University of Toronto, Toronto, Ontario
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引用次数: 0
Asymmetric eye size in an infant. 婴儿眼睛大小不对称。
Q3 Medicine Pub Date : 2020-10-11 eCollection Date: 2020-10-01 DOI: 10.3138/jammi-2020-0006
Brett D Edwards, Joseph V Vayalumkal, Rupesh Chawla, Kevin Fonseca, Hong Yuan Zhou

Toxoplasmosis is an uncommon congenital infection in Canada, but one with potentially severe clinical manifestations, including fetal death. Neurologic and ocular manifestations are frequent in untreated disease; however, small eye size (microphthalmia) is a rare finding. This finding may be a marker of severe ocular disease. As universal screening does not occur in Canada, clinicians' early recognition is imperative, particularly given the lack of risk factors in many patients and the benefit that treatment may have even in initially asymptomatic disease. Here, we report a case of congenital toxoplasmosis and review the diagnostics and treatment of the infection.

弓形虫病是一种罕见的先天性感染在加拿大,但一个潜在的严重的临床表现,包括胎儿死亡。未经治疗的疾病常出现神经和眼部表现;然而,小眼(小眼)是一种罕见的发现。这一发现可能是严重眼病的标志。由于加拿大没有进行普遍筛查,临床医生的早期识别是必不可少的,特别是考虑到许多患者缺乏危险因素,并且即使在最初无症状的疾病中治疗也可能带来益处。在此,我们报告一例先天性弓形虫病,并对该病的诊断和治疗进行综述。
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引用次数: 1
Rabies virus infection in a 21-year-old male presenting with ascending paralysis after a bat scratch. 一名21岁男性感染狂犬病毒,在被蝙蝠抓伤后出现上升性麻痹。
Q3 Medicine Pub Date : 2020-10-11 eCollection Date: 2020-10-01 DOI: 10.3138/jammi-2020-0007
Shay-Anne Daniels, Elizabeth M King, Christopher J Olivier, John Pd Harding, Christine Fehlner-Gardiner, Susan Nadin-Davis, Melanie Cm Murray

A 21-year-old, previously healthy male presented to hospital following 1 week of bilateral asymmetric ascending paralysis, odynophagia, and dysphagia. Initial magnetic resonance imaging (MRI) of the spine revealed an abnormal increased T2 signal with predominant dorsal column involvement and sparing of white matter throughout the cervical cord and extending to T5. The initial presumptive diagnosis was an acute infectious, versus inflammatory, myelitis. On reviewing the history, family members recalled a bat scratch on the left hand, sustained months prior, for which the patient did not seek or receive post-exposure prophylaxis (PEP). Rabies virus (RABV) RNA was detected by quantitative reverse transcription polymerase chain reaction (RT-qPCR) in two saliva samples, while nuchal skin biopsy and cerebrospinal fluid (CSF) were negative. Serum was negative for RABV neutralizing antibody. Sequencing and phylogenetic analyses identified the infecting RABV as a variant associated with silver-haired bats. Following risk assessment of exposure, 67 health care workers and several family members were offered PEP.

一名21岁的健康男性,在出现双侧不对称上升性麻痹、吞咽困难和吞咽困难1周后入院。脊柱的初始磁共振成像(MRI)显示T2信号异常增加,主要累及脊背柱,整个颈髓白质保留,并延伸至T5。最初的推定诊断是急性感染性与炎症性脊髓炎。在回顾病史时,家庭成员回忆起几个月前左手有蝙蝠抓伤,患者没有寻求或接受暴露后预防(PEP)。采用定量逆转录聚合酶链反应(RT-qPCR)检测两份唾液样本的狂犬病毒(RABV) RNA,颈部皮肤活检和脑脊液(CSF)检测均为阴性。血清RABV中和抗体阴性。测序和系统发育分析确定感染RABV是与银毛蝙蝠相关的一种变异。在接触风险评估之后,67名卫生保健工作者和几名家庭成员接受了PEP。
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引用次数: 2
Using blood donors and solid organ transplant donors and recipients to estimate the seroprevalence of cytomegalovirus and Epstein-Barr virus in Canada: A cross-sectional study. 在加拿大使用献血者和实体器官移植献血者和接受者来估计巨细胞病毒和eb病毒的血清阳性率:一项横断面研究。
Q3 Medicine Pub Date : 2020-10-11 eCollection Date: 2020-10-01 DOI: 10.3138/jammi-2020-0005
Curtis Mabilangan, Catherine Burton, Sheila O'Brien, Sabrina Plitt, Dean Eurich, Jutta Preiksaitis

Background: Cytomegalovirus (CMV) and Epstein-Barr virus (EBV) infections are common, causing significant morbidity in pregnancy (congenital CMV) and transplant recipients (CMV, EBV). Canadian prevalence data are needed to model disease burden and develop strategies for future vaccines. We estimated prevalence using screening data from blood donors and solid organ transplant (SOT) donors and recipients.

Methods: We retrospectively analyzed CMV and EBV serology from Alberta SOT donors (n = 3,016) and recipients (n = 4,614) (1984-2013) and Canadian Blood Services blood donors (n = 1,253,350) (2005-2014), studying associations with age, sex, organ, year, and geographic region.

Results: CMV seroprevalence rises gradually with age. By age 70, CMV seropositivity ranged from 67% (blood donors) to 73% (SOT recipients). Significant proportions of women of child-bearing age were CMV-seronegative (organ donors, 44%; SOT recipients, 43%; blood donors, 61%). Blood donor CMV seroprevalence decreased from 48% in Western Canada to 30% in Eastern Canada. Women were more likely to be CMV-seropositive (ORs = 1.58, 1.45, and 1.11 for organ donors, SOT recipients, and blood donors, respectively) and EBV-seropositive (ORs = 1.87 and 1.46 for organ donors and SOT recipients, respectively). EBV prevalence rises rapidly, and by age 17-29 years, 81% of SOT recipients and 90% of organ donors were seropositive.

Conclusions: Canada has relatively low and perhaps decreasing age-specific EBV and CMV prevalence, making Canadians vulnerable to primary infection-associated morbidity and suggesting benefit from future vaccines. Collection and analysis of routine serology screening data are useful for observing trends.

背景:巨细胞病毒(CMV)和eb病毒(EBV)感染很常见,在妊娠期(先天性CMV)和移植受者(CMV、EBV)中发病率很高。需要加拿大的流行率数据来建立疾病负担模型并制定未来疫苗的战略。我们使用献血者和实体器官移植(SOT)献血者和受者的筛查数据估计患病率。方法:回顾性分析艾伯塔省SOT献血者(n = 3016)、受体(n = 4614)(1984-2013)和加拿大血液服务局献血者(n = 1253350)(2005-2014)的CMV和EBV血清学,研究其与年龄、性别、器官、年份和地理区域的关系。结果:巨细胞病毒血清阳性率随年龄增长逐渐升高。到70岁时,CMV血清阳性从67%(献血者)到73% (SOT接受者)不等。相当比例的育龄妇女cmv血清阴性(器官供体,44%;SOT接受者,43%;献血者(61%)。献血者巨细胞病毒血清阳性率从加拿大西部的48%下降到加拿大东部的30%。女性更有可能是cmv血清阳性(器官捐献者、SOT受者和献血者的or分别为1.58、1.45和1.11)和ebv血清阳性(器官捐献者和SOT受者的or分别为1.87和1.46)。EBV患病率迅速上升,到17-29岁时,81%的SOT受者和90%的器官供者血清呈阳性。结论:加拿大的EBV和CMV患病率相对较低,并且可能正在下降,这使得加拿大人容易发生与原发性感染相关的发病率,并建议未来接种疫苗。收集和分析常规血清学筛查数据有助于观察趋势。
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引用次数: 5
Drug use evaluation (DUE) of ceftriaxone: A quality metric in a pediatric hospital. 头孢曲松药物使用评价(DUE):儿科医院的质量指标。
Q3 Medicine Pub Date : 2020-10-11 eCollection Date: 2020-10-01 DOI: 10.3138/jammi-2019-0026
Clara Delorme, Isabelle Viel-Thériault, Tassnim Moradipour, Nicole Le Saux

Background: Ceftriaxone is frequently used as empiric therapy because of its broad spectrum and dosing characteristics. The purpose of this study was to evaluate the appropriateness of ceftriaxone therapy among hospitalized children using drug use evaluation (DUE) methodology.

Methods: Hospitalized patients who received one or fewer dose of intravenous ceftriaxone at Children's Hospital of Eastern Ontario between January 1, 2018, and June 30, 2018, were identified. Duration was defined as empiric if 72 or less and definitive if more than 72 hours. Two infectious disease physicians reviewed the charts and rated appropriateness using a previously developed scale.

Results: A total of 276 ceftriaxone courses in 248 patients (mean age 6.0 y) were reviewed. Of these, 153 (55.4%) were assessed as definitively or possibly indicated. The most common reason for inappropriate empiric use was an overly broad spectrum. Of the 120 courses given empirically for which there was no indication, the three most common reasons were lower respiratory infections (51; 42.5%), head and neck infections (18; 15.0%), and intra-abdominal infections (15; 12.5%). Of the 39 (14.1%) courses of ceftriaxone that were given for more than 72 hours, 14 (35.9%) met criteria for a definitive or possible indication.

Conclusion: Ceftriaxone is still overused as empiric therapy. Although 85% of courses were discontinued after three doses, 14% were continued for longer than 72 hours, with approximately one-third ultimately meeting an indication. DUE using Canadian pediatric and local guidelines criteria is useful to identify clinical presentations for which narrower spectrum antimicrobials should be used.

背景:头孢曲松由于其广谱和给药特点,经常被用作经经验治疗。本研究的目的是采用药物使用评价(DUE)方法评价头孢曲松治疗在住院儿童中的适宜性。方法:对2018年1月1日至2018年6月30日期间在安大略省东部儿童医院接受一剂或更少剂量静脉注射头孢曲松的住院患者进行分析。持续时间定义为经验,如果72小时或更少,确定,如果超过72小时。两名传染病医生审查了这些图表,并使用先前开发的量表对适当性进行了评分。结果:248例患者(平均年龄6.0岁)共276个头孢曲松疗程。其中153例(55.4%)被评估为明确或可能指征。不恰当的经验性使用最常见的原因是频谱过于宽泛。在经验给出的120个疗程中,没有指征,三个最常见的原因是下呼吸道感染(51;42.5%),头颈部感染(18%;15.0%)和腹腔内感染(15;12.5%)。在给予头孢曲松超过72小时的39个疗程(14.1%)中,14个疗程(35.9%)符合明确或可能适应证的标准。结论:头孢曲松作为经验性治疗仍存在滥用现象。虽然85%的疗程在三次剂量后停止,但14%的疗程持续超过72小时,约三分之一的患者最终达到适应症。使用加拿大儿科和地方指南标准有助于确定应使用窄谱抗菌素的临床表现。
{"title":"Drug use evaluation (DUE) of ceftriaxone: A quality metric in a pediatric hospital.","authors":"Clara Delorme,&nbsp;Isabelle Viel-Thériault,&nbsp;Tassnim Moradipour,&nbsp;Nicole Le Saux","doi":"10.3138/jammi-2019-0026","DOIUrl":"https://doi.org/10.3138/jammi-2019-0026","url":null,"abstract":"<p><strong>Background: </strong>Ceftriaxone is frequently used as empiric therapy because of its broad spectrum and dosing characteristics. The purpose of this study was to evaluate the appropriateness of ceftriaxone therapy among hospitalized children using drug use evaluation (DUE) methodology.</p><p><strong>Methods: </strong>Hospitalized patients who received one or fewer dose of intravenous ceftriaxone at Children's Hospital of Eastern Ontario between January 1, 2018, and June 30, 2018, were identified. Duration was defined as empiric if 72 or less and definitive if more than 72 hours. Two infectious disease physicians reviewed the charts and rated appropriateness using a previously developed scale.</p><p><strong>Results: </strong>A total of 276 ceftriaxone courses in 248 patients (mean age 6.0 y) were reviewed. Of these, 153 (55.4%) were assessed as definitively or possibly indicated. The most common reason for inappropriate empiric use was an overly broad spectrum. Of the 120 courses given empirically for which there was no indication, the three most common reasons were lower respiratory infections (51; 42.5%), head and neck infections (18; 15.0%), and intra-abdominal infections (15; 12.5%). Of the 39 (14.1%) courses of ceftriaxone that were given for more than 72 hours, 14 (35.9%) met criteria for a definitive or possible indication.</p><p><strong>Conclusion: </strong>Ceftriaxone is still overused as empiric therapy. Although 85% of courses were discontinued after three doses, 14% were continued for longer than 72 hours, with approximately one-third ultimately meeting an indication. DUE using Canadian pediatric and local guidelines criteria is useful to identify clinical presentations for which narrower spectrum antimicrobials should be used.</p>","PeriodicalId":36782,"journal":{"name":"JAMMI","volume":" ","pages":"139-144"},"PeriodicalIF":0.0,"publicationDate":"2020-10-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.3138/jammi-2019-0026","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40670580","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Pandoraea sp infection in a lung transplant patient and the critical role of MALDI-TOF in accurate bacterial identification. 一例肺移植患者的潘多拉菌感染及MALDI-TOF在准确细菌鉴定中的关键作用
Q3 Medicine Pub Date : 2020-10-11 eCollection Date: 2020-10-01 DOI: 10.3138/jammi-2020-0001
Catherine-Audrey Boutin, Gilbert Cornut, Véronica Bilik Pinto, Simon Grandjean Lapierre

Diagnosis and clinical management of pulmonary infections in lung transplant patients are challenging. The increased diversity of bacterial species identified from clinical samples with novel proteomics-based systems can further complicate clinical decision making in this highly vulnerable population. Whether newly recognized organisms are colonizers or true pathogens often remains controversial since symptoms causality and impact on lung function is often unknown. We present the case of a 48-year-old female lung transplant patient with Pandoraea sp infection. We review and discuss the role of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) for accurate bacterial identification. We report on therapeutic management and clinical outcome.

肺移植患者肺部感染的诊断和临床管理具有挑战性。基于新型蛋白质组学的系统从临床样本中鉴定出的细菌种类多样性增加,可能会使这一高度易感人群的临床决策进一步复杂化。由于症状、因果关系和对肺功能的影响往往是未知的,新发现的微生物是殖民者还是真正的病原体常常存在争议。我们报告一例48岁女性肺移植患者感染潘多拉菌。我们回顾并讨论了基质辅助激光解吸/电离飞行时间质谱(MALDI-TOF MS)在准确鉴定细菌中的作用。我们报告治疗管理和临床结果。
{"title":"<i>Pandoraea</i> sp infection in a lung transplant patient and the critical role of MALDI-TOF in accurate bacterial identification.","authors":"Catherine-Audrey Boutin,&nbsp;Gilbert Cornut,&nbsp;Véronica Bilik Pinto,&nbsp;Simon Grandjean Lapierre","doi":"10.3138/jammi-2020-0001","DOIUrl":"https://doi.org/10.3138/jammi-2020-0001","url":null,"abstract":"<p><p>Diagnosis and clinical management of pulmonary infections in lung transplant patients are challenging. The increased diversity of bacterial species identified from clinical samples with novel proteomics-based systems can further complicate clinical decision making in this highly vulnerable population. Whether newly recognized organisms are colonizers or true pathogens often remains controversial since symptoms causality and impact on lung function is often unknown. We present the case of a 48-year-old female lung transplant patient with <i>Pandoraea</i> sp infection. We review and discuss the role of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) for accurate bacterial identification. We report on therapeutic management and clinical outcome.</p>","PeriodicalId":36782,"journal":{"name":"JAMMI","volume":" ","pages":"177-181"},"PeriodicalIF":0.0,"publicationDate":"2020-10-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9608733/pdf/jammi-2020-0001.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40670582","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Comparison of Accelerate PhenoTest BC Kit and MALDI-TOF MS/VITEK 2 System for the rapid identification and antimicrobial susceptibility testing of gram-negative bacilli causing bloodstream infections. 加速表型测试BC试剂盒与MALDI-TOF MS/VITEK 2系统快速鉴定革兰氏阴性杆菌血流感染及药敏试验的比较
Q3 Medicine Pub Date : 2020-10-11 eCollection Date: 2020-10-01 DOI: 10.3138/jammi-2020-0004
William Stokes, Lorraine Campbell, Johann Pitout, John Conly, Deirdre Church, Dan Gregson

Background: Our laboratory uses matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI) and the VITEK 2 system (DV2) directly from positive blood cultures (BC) for organism identification (ID) and antimicrobial susceptibility testing (AST). Our objective was to compare direct MALDI-DV2 with a commercial BC ID-AST platform, the Accelerate Pheno system (AXDX), in the ID-AST of clinical and seeded BC positive for gram-negative bacilli (GNB).

Methods: BC positive for GNB were collected over a 3-mo period and tested using AXDX and direct MALDI-DV2 and compared with conventional methods. A subset of sterile BC were seeded with multi-drug-resistant GNB.

Results: Twenty-nine clinical samples and 35 seeded samples were analyzed. Direct MALDI had a higher ID failure rate (31.0%) than AXDX (3.4%; p < 0.001). Time to ID-AST was 1.5-6.9 h, 5.8-16.5 h, and 21.6-33.0 h for AXDX, direct MALDI-DV2, and conventional methods, respectively (p < 0.001). For clinical samples, AXDX and DV2 had essential agreement (EA) or categorical agreement (CA) of more than 96%. For seeded samples, AXDX had EA, CA, VME, ME, and minor error (mE) of 93.2%, 89.0%, 2.2%, 0%, and 9.2%, respectively. AXDX had a large number of non-reports (6.1%) stemming from meropenem testing. DV2 had EA, CA, VME, ME, and mE of 97.5%, 94.7%, 1.3%, 0%, and 4.1%, respectively.

Conclusions: Direct MALDI-DV2 and AXDX both had high agreement for clinical samples, but direct MALDI-DV2 had higher agreement when challenged with MDR GNB.

背景:本实验室采用基质辅助激光解吸/电离飞行时间质谱法(MALDI)和直接从阳性血培养物(BC)中提取的VITEK 2系统(DV2)进行生物鉴定(ID)和抗菌药敏试验(AST)。我们的目的是比较直接MALDI-DV2与商业BC ID-AST平台,加速Pheno系统(AXDX),在临床和种子BC中革兰氏阴性杆菌(GNB)阳性的ID-AST。方法:收集GNB BC阳性3个月,采用AXDX和直接MALDI-DV2检测,并与常规方法进行比较。无菌BC的一个子集播种了多重耐药的GNB。结果:临床标本29份,种子标本35份。直接MALDI的ID失败率(31.0%)高于AXDX (3.4%);P < 0.001)。AXDX法、直接MALDI-DV2法和常规法的ID-AST时间分别为1.5 ~ 6.9 h、5.8 ~ 16.5 h和21.6 ~ 33.0 h (p < 0.001)。对于临床样本,AXDX和DV2基本一致(EA)或分类一致(CA)超过96%。对于种子样品,AXDX的EA、CA、VME、ME和次要误差(ME)分别为93.2%、89.0%、2.2%、0%和9.2%。AXDX有大量来自美罗培南检测的非报告(6.1%)。DV2的EA、CA、VME、ME、ME分别为97.5%、94.7%、1.3%、0%、4.1%。结论:直接MALDI-DV2和AXDX对临床样品具有较高的一致性,但直接MALDI-DV2在MDR GNB挑战时具有更高的一致性。
{"title":"Comparison of Accelerate PhenoTest BC Kit and MALDI-TOF MS/VITEK 2 System for the rapid identification and antimicrobial susceptibility testing of gram-negative bacilli causing bloodstream infections.","authors":"William Stokes,&nbsp;Lorraine Campbell,&nbsp;Johann Pitout,&nbsp;John Conly,&nbsp;Deirdre Church,&nbsp;Dan Gregson","doi":"10.3138/jammi-2020-0004","DOIUrl":"https://doi.org/10.3138/jammi-2020-0004","url":null,"abstract":"<p><strong>Background: </strong>Our laboratory uses matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI) and the VITEK 2 system (DV2) directly from positive blood cultures (BC) for organism identification (ID) and antimicrobial susceptibility testing (AST). Our objective was to compare direct MALDI-DV2 with a commercial BC ID-AST platform, the Accelerate Pheno system (AXDX), in the ID-AST of clinical and seeded BC positive for gram-negative bacilli (GNB).</p><p><strong>Methods: </strong>BC positive for GNB were collected over a 3-mo period and tested using AXDX and direct MALDI-DV2 and compared with conventional methods. A subset of sterile BC were seeded with multi-drug-resistant GNB.</p><p><strong>Results: </strong>Twenty-nine clinical samples and 35 seeded samples were analyzed. Direct MALDI had a higher ID failure rate (31.0%) than AXDX (3.4%; <i>p</i> < 0.001). Time to ID-AST was 1.5-6.9 h, 5.8-16.5 h, and 21.6-33.0 h for AXDX, direct MALDI-DV2, and conventional methods, respectively (<i>p</i> < 0.001). For clinical samples, AXDX and DV2 had essential agreement (EA) or categorical agreement (CA) of more than 96%. For seeded samples, AXDX had EA, CA, VME, ME, and minor error (mE) of 93.2%, 89.0%, 2.2%, 0%, and 9.2%, respectively. AXDX had a large number of non-reports (6.1%) stemming from meropenem testing. DV2 had EA, CA, VME, ME, and mE of 97.5%, 94.7%, 1.3%, 0%, and 4.1%, respectively.</p><p><strong>Conclusions: </strong>Direct MALDI-DV2 and AXDX both had high agreement for clinical samples, but direct MALDI-DV2 had higher agreement when challenged with MDR GNB.</p>","PeriodicalId":36782,"journal":{"name":"JAMMI","volume":" ","pages":"145-157"},"PeriodicalIF":0.0,"publicationDate":"2020-10-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9608732/pdf/jammi-2020-0004.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40670579","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Canadian physicians' knowledge, attitudes, and beliefs about the risk of HTLV infection in solid organ transplantation. 加拿大医生对实体器官移植中HTLV感染风险的认识、态度和信念。
Q3 Medicine Pub Date : 2020-10-11 eCollection Date: 2020-10-01 DOI: 10.3138/jammi-2019-0017
Glenn Patriquin, Jill E Hatchette, Todd F Hatchette
{"title":"Canadian physicians' knowledge, attitudes, and beliefs about the risk of HTLV infection in solid organ transplantation.","authors":"Glenn Patriquin,&nbsp;Jill E Hatchette,&nbsp;Todd F Hatchette","doi":"10.3138/jammi-2019-0017","DOIUrl":"https://doi.org/10.3138/jammi-2019-0017","url":null,"abstract":"","PeriodicalId":36782,"journal":{"name":"JAMMI","volume":" ","pages":"124-126"},"PeriodicalIF":0.0,"publicationDate":"2020-10-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9608730/pdf/jammi-2019-0017.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40670584","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Pseudomonas aeruginosa infection in intensive care: Epidemiology, outcomes, and antimicrobial susceptibilities. 重症监护中的铜绿假单胞菌感染:流行病学、结果和抗菌药物敏感性。
Q3 Medicine Pub Date : 2020-10-11 eCollection Date: 2020-10-01 DOI: 10.3138/jammi-2020-0003
Brittany E Kula, Darren Hudson, Wendy I Sligl

Background: Pseudomonas aeruginosa (PA) infection in the intensive care unit (ICU) contributes to substantial mortality. In this study, we describe the epidemiology, antimicrobial susceptibilities, and outcomes of ICU patients with pseudomonal infection.

Methods: ICU patients with PA were identified and classified as colonized or infected. Infected patients were reviewed for source, patient characteristics, antimicrobial susceptibilities, appropriateness of empiric antimicrobial therapy, and 30-day mortality. Independent predictors of mortality were identified using multivariable logistic regression.

Results: One hundred forty (71%) patients with PA were infected. Mean patient age was 55 (SD 18) years; 62% were male. Admission categories included medical (71%), surgical (20%), and trauma or neurological (9%). Mean Acute Physiology and Chronic Health Evaluation (APACHE) II score was 19 (SD 10). One hundred twenty-six (90%) patients were mechanically ventilated, 102 (73%) required vasopressors, and 27 (19%) received renal replacement; 32 (23%) died within 30 days. Infection was nosocomial in 101 (72%) cases. Sources were respiratory (66%), skin-soft tissue (11%), urinary (10%), blood (5%), surgical (5%), gastrointestinal (2%), or unknown (1%). Twenty (14%) isolates were multi-drug resistant; 6 (4%) were extensively drug resistant. Empiric antimicrobial therapy was effective in 97 (69%) cases. Liver disease (adjusted OR [aOR] 6.2, 95% CI 1.5 to 25.7; p = 0.01), malignancy (aOR 5.0, 95% CI 1.5 to 17.3; p = 0.01), and higher APACHE II score (aOR 1.1, 95% CI 1.0 to 1.1; p = 0.02) were independently associated with 30-day mortality.

Conclusions: PA infection in ICU is most commonly respiratory and associated with substantial mortality. Existing malignancy, liver disease, and higher APACHE II score were independently associated with mortality.

背景:重症监护病房(ICU)的铜绿假单胞菌(PA)感染是造成大量死亡的原因之一。在这项研究中,我们描述了流行病学,抗菌药物敏感性和ICU患者假单胞菌感染的结局。方法:对重症监护病房的PA患者进行鉴定,并将其分为定植型和感染型。对感染患者的来源、患者特征、抗菌药物敏感性、经验性抗菌药物治疗的适宜性和30天死亡率进行审查。使用多变量逻辑回归确定死亡率的独立预测因子。结果:140例(71%)PA患者感染。患者平均年龄55岁(SD 18岁);62%是男性。入院类别包括内科(71%)、外科(20%)和创伤或神经系统(9%)。急性生理和慢性健康评估(APACHE) II平均评分为19 (SD 10)。126例(90%)患者接受机械通气,102例(73%)患者需要血管加压药物,27例(19%)患者接受肾脏替代;32例(23%)在30天内死亡。医院感染101例(72%)。来源为呼吸道(66%)、皮肤软组织(11%)、尿液(10%)、血液(5%)、外科(5%)、胃肠道(2%)或未知(1%)。20株(14%)具有多重耐药;6例(4%)广泛耐药。经验性抗菌药物治疗97例(69%)有效。肝病(调整OR [aOR] 6.2, 95% CI 1.5 ~ 25.7;p = 0.01),恶性肿瘤(aOR 5.0, 95% CI 1.5 ~ 17.3;p = 0.01),且APACHE II评分较高(aOR 1.1, 95% CI 1.0 ~ 1.1;P = 0.02)与30天死亡率独立相关。结论:ICU中PA感染最常见的是呼吸道感染,并与大量死亡率相关。现有的恶性肿瘤、肝脏疾病和较高的APACHE II评分与死亡率独立相关。
{"title":"<i>Pseudomonas aeruginosa</i> infection in intensive care: Epidemiology, outcomes, and antimicrobial susceptibilities.","authors":"Brittany E Kula,&nbsp;Darren Hudson,&nbsp;Wendy I Sligl","doi":"10.3138/jammi-2020-0003","DOIUrl":"https://doi.org/10.3138/jammi-2020-0003","url":null,"abstract":"<p><strong>Background: </strong><i>Pseudomonas aeruginosa</i> (PA) infection in the intensive care unit (ICU) contributes to substantial mortality. In this study, we describe the epidemiology, antimicrobial susceptibilities, and outcomes of ICU patients with pseudomonal infection.</p><p><strong>Methods: </strong>ICU patients with PA were identified and classified as colonized or infected. Infected patients were reviewed for source, patient characteristics, antimicrobial susceptibilities, appropriateness of empiric antimicrobial therapy, and 30-day mortality. Independent predictors of mortality were identified using multivariable logistic regression.</p><p><strong>Results: </strong>One hundred forty (71%) patients with PA were infected. Mean patient age was 55 (SD 18) years; 62% were male. Admission categories included medical (71%), surgical (20%), and trauma or neurological (9%). Mean Acute Physiology and Chronic Health Evaluation (APACHE) II score was 19 (SD 10). One hundred twenty-six (90%) patients were mechanically ventilated, 102 (73%) required vasopressors, and 27 (19%) received renal replacement; 32 (23%) died within 30 days. Infection was nosocomial in 101 (72%) cases. Sources were respiratory (66%), skin-soft tissue (11%), urinary (10%), blood (5%), surgical (5%), gastrointestinal (2%), or unknown (1%). Twenty (14%) isolates were multi-drug resistant; 6 (4%) were extensively drug resistant. Empiric antimicrobial therapy was effective in 97 (69%) cases. Liver disease (adjusted OR [aOR] 6.2, 95% CI 1.5 to 25.7; <i>p</i> = 0.01), malignancy (aOR 5.0, 95% CI 1.5 to 17.3; <i>p</i> = 0.01), and higher APACHE II score (aOR 1.1, 95% CI 1.0 to 1.1; <i>p</i> = 0.02) were independently associated with 30-day mortality.</p><p><strong>Conclusions: </strong>PA infection in ICU is most commonly respiratory and associated with substantial mortality. Existing malignancy, liver disease, and higher APACHE II score were independently associated with mortality.</p>","PeriodicalId":36782,"journal":{"name":"JAMMI","volume":" ","pages":"130-138"},"PeriodicalIF":0.0,"publicationDate":"2020-10-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9608728/pdf/jammi-2020-0003.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40670585","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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