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Novel hybrid biofilm system using synthetically engineered curli fibres 利用合成工程卷曲纤维的新型杂交生物膜系统
Pub Date : 2018-08-23 DOI: 10.18192/OSURJ.V1I1.3708
H. Ramesh, Keerthana Pasumarthi, M. Hou, Jennifer Lee
Hydraulic fracturing, a popular mining technique, generates heavy metal contamination in nearby freshwater aquifers. This poses a threat to both the surrounding ecosystems an  human health if exposed. Existing methods of heavy metal removal can produce additional hazardous byproducts. This proposal presents the use of a hybrid biofilm filter containing graphene and curli fibres with metal binding sites. Curli fibres are amyloid fibrils found on the extracellular biofilm of Escherichia coli (E coli.). Through the use of plasmid vectors, E. coliwill be engineered to produce secreted curli fibres with metal-binding residues. The stability and cohesive properties of the curli fibres augments the adherence to the graphene scaffolding, thus allowing for generation of a hybrid biofilm. With the filtration design and various experimental controls proposed, this model is ready for empirical proof of concept and subsequent quantitative optimization.
水力压裂是一种流行的采矿技术,在附近的淡水含水层中产生重金属污染。这将对周围的生态系统和人类健康造成威胁。现有的重金属去除方法会产生额外的有害副产品。该提案提出了一种混合生物膜过滤器的使用,该过滤器含有石墨烯和具有金属结合位点的卷曲纤维。卷曲纤维是在大肠杆菌的细胞外生物膜上发现的淀粉样原纤维。通过使用质粒载体,大肠杆菌将被改造成产生分泌的带有金属结合残基的卷曲纤维。卷曲纤维的稳定性和内聚性增强了对石墨烯支架的粘附性,从而允许产生杂交生物膜。随着过滤设计和各种实验控制的提出,该模型为概念的经验证明和随后的定量优化做好了准备。
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引用次数: 0
Comparison of regenerative neurogenesis in response to CNS injury between adult zebrafish and mice 成年斑马鱼与小鼠中枢神经系统损伤后再生神经发生的比较
Pub Date : 2018-08-23 DOI: 10.18192/OSURJ.V1I1.3696
Kuan Chung
The difference between adult zebrafish and mice in their regenerative capacity following central nervous system (CNS) injury is influenced by the permissiveness of the brain microenvironment aside from the intrinsic neurogenic potential of the cell population. In adult zebrafish, glia cells largely retain their radial characteristics and neurogenic capacity, and the zebrafish brain shows full recovery after traumatic brain injury (TBI) as well as spinal cord injury (SCI). Conversely, in mice, radial glia (RG) have largely differentiated into astrocytes. Excluding certain brain regions, following TBI, reactive astrocytes that show the potential to become neural stem cells (NSCs) in vitro remain strictly non-neurogenic in vivo due to the presence of inhibitory factors in the microenvironment. Combined with prolonged inflammation and gliosis, injury to the CNS eventually results in formation of a glial scar further impeding regeneration. However in rodents, suppression of neurogenesis may be a protection mechanism against possible detrimental side-effects of neurogenesis in the long term.
成年斑马鱼和小鼠在中枢神经系统(CNS)损伤后再生能力的差异除了受细胞群固有神经源性的影响外,还受脑微环境的容纳性的影响。在成年斑马鱼中,神经胶质细胞在很大程度上保留了其径向特征和神经发生能力,斑马鱼的大脑在创伤性脑损伤(TBI)和脊髓损伤(SCI)后表现出完全的恢复。相反,在小鼠中,径向胶质细胞(RG)大部分分化为星形胶质细胞。排除脑外伤后的某些脑区,由于微环境中存在抑制因子,在体外表现出成为神经干细胞(NSCs)潜力的反应性星形胶质细胞在体内严格保持非神经源性。再加上长期的炎症和神经胶质瘤,中枢神经系统的损伤最终导致神经胶质瘤疤痕的形成,进一步阻碍再生。然而,在啮齿类动物中,抑制神经发生可能是一种长期的保护机制,可以防止神经发生可能产生的有害副作用。
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引用次数: 1
Chromosomal instability and aneuploidy: a conundrum in cancer evolution 染色体不稳定性和非整倍体:癌症进化中的一个难题
Pub Date : 2018-08-23 DOI: 10.18192/osurj.v1i1.3690
J. Ali
Chromosomal instability (CIN), defined as an increased rate of gain or loss of whole chromosomes, leads to aneuploid cells, which are cells that display an abnormal number of chromosomes. Both CIN and aneuploidy are hallmarks of cancer, yet the underlying mechanisms of CIN and aneuploidy and their impact on tumourigenesis have remained poorly defined. Although multiple mechanisms have been proposed to explain the role of CIN and aneuploidy in tumourigenesis, this review focuses on three principal pathways leading to CIN: spindle assembly checkpoint defects, merotelic attachments, and cohesion defects. Here, we provide a brief overview of the current understanding of the roles of these mechanisms in CIN and aneuploidy. We also present emerging evidence that contradicts the importance of certain mechanisms in cancer evolution. A clearer understanding of these fundamental pathways could prove to be helpful in developing effective cancer therapies.
染色体不稳定性(CIN),定义为整个染色体的获得或丢失率增加,导致非整倍体细胞,这是一种显示异常染色体数量的细胞。CIN和非整倍体都是癌症的标志,然而CIN和非整倍体的潜在机制及其对肿瘤发生的影响仍然不明确。尽管已经提出了多种机制来解释CIN和非整倍体在肿瘤发生中的作用,但本文主要关注导致CIN的三个主要途径:纺锤体组装检查点缺陷、merotelic附着和内聚缺陷。在这里,我们简要概述了目前对这些机制在CIN和非整倍体中的作用的理解。我们还提出了与癌症进化中某些机制的重要性相矛盾的新证据。更清楚地了解这些基本途径可能有助于开发有效的癌症治疗方法。
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引用次数: 0
The effects of radium-226 in cattle and predicted impacts of cancer 镭-226对牛的影响及对癌症的预测影响
Pub Date : 2018-08-23 DOI: 10.18192/osurj.v1i1.3714
Nayha Eijaz, Bhairavei Gnanamanogaran, P. Kapoor, Saranya Naraentheraraja
Hydraulic fracturing is a controversial method of natural gas extraction that has gained its fair share of critics. Although research has been conducted on the environmentalimpact of fracking, research concerning naturally occurring radioactive materials (NORM) has been scarce. Radionuclides are known to bioaccumulate in the environment and can have toxic effects on humans. This study aims to examine the extent of biomagnification of radium-226 in soil, crops and animals. Fluid samples from areas near fracking sites will be compared with samples from non-fracking sites via gamma spectroscopy. Homogenized samples of soil and crops will be analyzed by gamma spectroscopy while milk and cattle meat samples will undergo alpha spectroscopy. This will provide a clear image of the process of bioaccumulation and magnification of radionuclides in the environment as a byproduct of fracking.
水力压裂法是一种有争议的天然气开采方法,受到了相当多的批评。虽然对水力压裂对环境的影响进行了研究,但对天然放射性物质(NORM)的研究却很少。已知放射性核素会在环境中生物积累,并可能对人类产生毒性作用。本研究旨在探讨226在土壤、作物和动物中的生物放大程度。来自压裂点附近地区的流体样本将通过伽马光谱与来自非压裂点的样本进行比较。土壤和农作物的均质样品将采用伽马光谱分析,牛奶和牛肉样品将采用α光谱分析。这将提供作为水力压裂副产品的放射性核素在环境中生物积累和放大过程的清晰图像。
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引用次数: 0
Investigating graphene oxide permeable reactive barriers for filtering groundwater contaminated from hydraulic fracturing 研究氧化石墨烯渗透反应屏障对水力压裂污染地下水的过滤作用
Pub Date : 2018-08-23 DOI: 10.18192/osurj.v1i1.3705
Zi-Han An, Konrad Grala, Aakanx K Panchal, K. Trivedi
Hydraulic fracturing, or fracking, is a method of natural gas extraction which involves pumping a brine solution into the ground to create a fracture that will allow natural gas to rise. One of the major concerns surrounding this method of natural gas extraction is that wastewater enters the groundwater supply, thereby contaminating it. This wastewater contains toxic materials such as heavy metal ions, radionuclides and other salts and organic compounds in high concentrations. Some of these materials are carcinogenic and thus a concern to human life and the environment. The current solution involves the use of a zerovalent iron (ZVI) permeable reactive barrier (PRB) to filter out these toxic substances. However, it causes more fouling due to the accumulation of mineral precipitates and therefore is not very effective. A recent development in nanotechnology may allow us to develop a superior water filter to prevent groundwater contamination. Therefore, a novel PRB is suggested: featuring the use of solid graphene oxide (GO), a nanomaterial with a superior sorption ability is proposed as a replacement for the system. The proposed experiment will test the filtration capability of the GO-PRB as compared to the traditional ZVI-PRB. By emulating the process of groundwater contamination and flow using common materials found in fracking wastewater, we can determine how much more effective the GO-PRB is than the ZVIPRB.
水力压裂法是一种天然气开采方法,它将盐水溶液泵入地下,形成一条裂缝,使天然气得以上升。围绕这种天然气开采方法的一个主要问题是废水进入地下水供应,从而污染地下水。这种废水含有高浓度的有毒物质,如重金属离子、放射性核素和其他盐和有机化合物。其中一些材料是致癌物质,因此对人类生命和环境造成了影响。目前的解决方案包括使用零价铁(ZVI)渗透性反应屏障(PRB)来过滤这些有毒物质。然而,由于矿物沉淀的积累,它会造成更多的污垢,因此不是很有效。纳米技术的最新发展可能使我们开发出一种高级水过滤器来防止地下水污染。因此,我们提出了一种新的PRB:使用固体氧化石墨烯(GO),一种具有优越吸附能力的纳米材料作为系统的替代品。与传统的ZVI-PRB相比,拟议的实验将测试GO-PRB的过滤能力。通过使用压裂废水中的常见物质模拟地下水污染和流动过程,我们可以确定GO-PRB比ZVIPRB更有效。
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引用次数: 1
Do stem cell divisions significantly contribute to cancer development? 干细胞分裂对癌症的发展有显著影响吗?
Pub Date : 2018-08-23 DOI: 10.18192/OSURJ.V1I1.3687
R. Sandarage, Justin G. Chitpin
Cancer is caused by uncontrolled cellular growth, yet some cancer cells may have greater roles in sustaining tumour proliferation and overcoming conventional cancer treatments. The origins of these cancer stem cells, as they are hypothesized, is widely contested. The current opinion points to extrinsic factors such as smoking, diet and sedentary lifestyle to be the primary inducer of cancer stem cells. This dogma was challenged in 2015 when Tomasetti and Vogelstein postulated that two-thirds of the variation in cancer risk could be explained by random mutations arising during DNA replication in healthy stem cells. Their "bad luck" hypothesis sparked fierce debate and controversy in the scientific community. In this point-counterpoint article, we discuss the random mutation cancer stem cell model and its implications for guiding public health through primary and secondary cancer prevention.
癌症是由不受控制的细胞生长引起的,然而一些癌细胞可能在维持肿瘤增殖和克服常规癌症治疗方面发挥更大的作用。这些癌症干细胞的起源,正如它们被假设的那样,是广泛争议的。目前的观点指出,吸烟、饮食和久坐不动的生活方式等外在因素是癌症干细胞的主要诱发因素。这一教条在2015年受到了挑战,当时托马塞蒂和沃格尔斯坦假设,三分之二的癌症风险变化可以用健康干细胞DNA复制过程中产生的随机突变来解释。他们的“坏运气”假说在科学界引发了激烈的争论和争议。在这篇点对点文章中,我们讨论了随机突变癌症干细胞模型及其通过原发性和继发性癌症预防指导公共卫生的意义。
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引用次数: 0
Optimization of reverse osmosis flowback water treatment using halotolerant microbes naturally enriched in fractured shales 利用裂缝页岩天然富集的耐盐微生物优化反渗透反排水处理
Pub Date : 2018-08-23 DOI: 10.18192/OSURJ.V1I1.3720
M. Cahalan, D. Moskal, Cimon Song, Jianhang Wu
Flowback water recovered after hydraulic fracturing operations poses a serious environmental concern due to the sheer quantity produced and its toxic chemical composition. Traditional methods of wastewater treatment cannot be used for flowback water treatment due to its high concentration of non-biodegradable dissolved solids. Consequently, alternative technology has been developed to address this problem. Reverse osmosis (RO) treatment is one such example. However, guar gum gelling agents found in flowback water impede membrane permeability and water flux rate of RO, consequently decreasing the efficiency and practicality of this desirable, environment-friendly technology. Previously, a biological solution using activated sludge to degrade guar gum prior to RO treatment was attempted with limited success due to the inhibitory effects of hypersalinity (characterized by high total dissolved solids content) on microbial activity. To solve this problem, several recently discovered strains of bacteria and archaea found to be naturally enriched in fractured shales may be utilized through genetic modification to degrade guar gum under hypersaline conditions. These microbes are naturally halotolerant and thrive under hypersaline conditions, making them prime targets for genetic modification targeting various chemical additives in flowback water. Here, we provide a proof of concept model using these microbes to selectively target guar gum degradation to improve the efficiency of RO treatment.
水力压裂作业后回收的返排水由于其巨大的产量和有毒的化学成分而引起了严重的环境问题。传统的废水处理方法不能用于反排水处理,因为其高浓度的不可生物降解的溶解固体。因此,已经开发出替代技术来解决这个问题。反渗透(RO)处理就是这样一个例子。然而,在反排水中发现瓜尔胶凝胶剂阻碍了反渗透膜的渗透性和水通量,从而降低了这一理想的环保技术的效率和实用性。此前,由于高盐度(以高总溶解固体含量为特征)对微生物活性的抑制作用,在反渗透处理之前,曾尝试使用活性污泥降解瓜尔胶的生物溶液,但成功率有限。为了解决这一问题,最近发现的几种天然富集于裂缝页岩中的细菌和古细菌可以通过基因改造来降解高盐条件下的瓜尔胶。这些微生物天生耐盐,在高盐条件下也能茁壮成长,这使它们成为针对反排水中各种化学添加剂进行基因改造的主要目标。在这里,我们提供了一个概念验证模型,利用这些微生物选择性地靶向瓜尔胶降解,以提高反渗透处理的效率。
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引用次数: 0
Shocking the brain to regain motor function : a non-invasive therapy for stroke patients 电击大脑以恢复运动功能:一种针对中风患者的非侵入性治疗方法
Pub Date : 2018-08-23 DOI: 10.18192/osurj.v1i1.3681
Michael Leung
Invasive treatments and its associated risks are important factors of concern when the conditions are affecting the nervous system. Transcranial direct current stimulation (tDCS) is a non-invasive technique that stimulates brain areas through the scalp and has excitatory or inhibitory neuromodulatory effects. In the context of stroke patients, recovery is often impaired from the increased inhibition of the damaged area from the unaffected hemisphere. Fujimoto et al. uses dual-hemisphere transcranial direct current stimulation to address this interhemispheric inhibition and demonstrates that stroke patients were able to periodically restore sensory deficits. 
当病情影响神经系统时,侵入性治疗及其相关风险是值得关注的重要因素。经颅直流电刺激(tDCS)是一种非侵入性技术,通过头皮刺激大脑区域,具有兴奋性或抑制性神经调节作用。在中风患者的情况下,由于未受影响的半球对受损区域的抑制增加,恢复往往受到损害。Fujimoto等人使用双半球经颅直流电刺激来解决这种半球间抑制,并证明中风患者能够周期性地恢复感觉缺陷。
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引用次数: 0
Examining estradiols neuroprotective abilities and mechanisms of action in cerebrovascular accidents and neurodegenerative conditions 研究雌二醇在脑血管意外和神经退行性疾病中的神经保护能力及其作用机制
Pub Date : 2018-08-23 DOI: 10.18192/OSURJ.V1I1.3699
Sukanthatulsee Uthayabalan
Estrogens are known for playing essential roles in the body. These hormones exert crucial protective actions when faced with neural damage. Numerous studies have provided a deep understanding of these unique actions that go far beyond the scope of reproduction and reproductive regulation. Through various mechanisms, delivery routes, dosage levels, and with the age and health status of the individuals receiving the treatment in mind, the hormone can be used in protecting against neural death. This review examines the discoveries that comprise the current body of knowledge regarding estrogen as a neuro-protector against cerebrovascular accidents (CVA, stroke) and neurodegenerative diseases. These findings have great implications for improving the quality of life in the aging population. They provide insight into the impact of hormones on the protection of neural tissues, and prompt discussion between members of the scientific community, ensuring that future clinical studies utilize methods that will maximize the quality of the obtained results.
众所周知,雌激素在人体中起着至关重要的作用。当面对神经损伤时,这些激素发挥重要的保护作用。大量的研究提供了对这些独特行为的深刻理解,这些行为远远超出了生殖和生殖调节的范围。通过各种机制、输送途径、剂量水平,以及考虑到接受治疗的个体的年龄和健康状况,该激素可用于防止神经死亡。本文综述了雌激素作为神经保护剂预防脑血管意外(CVA,中风)和神经退行性疾病的最新发现。这些发现对提高老年人的生活质量具有重要意义。它们提供了对激素对神经组织保护的影响的见解,并促进了科学界成员之间的讨论,确保未来的临床研究使用的方法将最大限度地提高所获得结果的质量。
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引用次数: 0
Reducing volatile organic compound emissions with a biofilter inoculated with synthetically engineered Escherichia coli 用合成工程大肠杆菌接种生物过滤器减少挥发性有机化合物排放
Pub Date : 2018-08-23 DOI: 10.18192/osurj.v1i1.3717
Mihai Dumbrava, C. Kao, Daniel Lee, I-Yuan Sung
Various byproducts of fracking, such as methane gas, benzene, and other Volatile Organic Compounds (VOCs), have become a target for studies on health and environmental damage. These compounds are released during natural gas and petroleum extraction, and from the toxic residual water created from the fracking process. Although the long-term effects of some of these chemicals have yet to be determined, the elevated levels present in neighboring communities have been shown to cause an increase in the prevalence of acute respiratory, neurological, and reproductive diseases. In order to reduce the levels of these harmful airborne pollutants, we propose the creation of a biofilter inoculated with genetically engineered bacteria designed to metabolize VOCs and convert them into safer end products.
水力压裂的各种副产品,如甲烷气体、苯和其他挥发性有机化合物(VOCs),已成为健康和环境损害研究的目标。这些化合物在天然气和石油开采过程中释放出来,也从水力压裂过程中产生的有毒残余水中释放出来。虽然其中一些化学物质的长期影响尚未确定,但在邻近社区中存在的水平升高已被证明会导致急性呼吸、神经和生殖疾病的患病率增加。为了降低这些有害空气污染物的水平,我们建议创建一种生物过滤器,接种基因工程细菌,旨在代谢挥发性有机化合物并将其转化为更安全的最终产品。
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引用次数: 0
期刊
University of Ottawa Science Undergraduate Research Journal
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