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Real-time analysis of microbial growth by means of the Heat-Transfer Method (HTM) using Saccharomyces cerevisiae as model organism 以酿酒酵母为模式生物的热传递法实时分析微生物生长
Q3 Medicine Pub Date : 2018-12-01 DOI: 10.1016/j.phmed.2018.05.001
K. Betlem , S. Hoksbergen , N. Mansouri , M. Down , P. Losada-Pérez , K. Eersels , B. van Grinsven , T.J. Cleij , P. Kelly , D. Sawtell , M. Zubko , C. Banks , M. Peeters

In this manuscript, we explore the use of the Heat-Transfer Method (HTM) for the real-time analysis of microbial growth using Saccharomyces cerevisiae as a model organism. The thermal responses of gold electrodes upon exposure to suspensions of S. cerevisiae (wild type strain DLY640) concentrations were monitored, demonstrating an increase in thermal resistance at the solid-liquid interface with higher concentrations of the microorganism. Flow cells were manufactured using 3D-printing to facilitate longitudinal experiments.

We can clearly discriminate between the growth of S. cerevisiae under optimal conditions and under the influence of factors that inhibit the replication process, such as the use of nutrient depleted growth medium, elevated temperature, and the presence of toxic compounds. In addition, it is possible to determine the kinetics of the growth process and quantify yeast replication which was demonstrated by measuring a mutant temperature sensitive strain.

This is the first time HTM has been used for the real-time determination of factors that impact microbial growth. Thermal sensing is low-cost, offers straightforward analysis and measurements can be performed on-site. Due to the versatility of this method, this platform can be extended to monitor other microorganisms and in particular to study the response of bacteria to selected antibiotics.

在这篇论文中,我们探讨了利用热传递法(HTM)实时分析以酿酒酵母为模式生物的微生物生长。对暴露于酵母悬浮液(野生型菌株DLY640)浓度下的金电极的热响应进行了监测,表明随着微生物浓度的增加,固液界面的热阻增加。为了便于纵向实验,我们使用3d打印技术制造了流动细胞。我们可以清楚地区分酿酒酵母在最佳条件下的生长和在抑制复制过程的因素的影响下的生长,如使用营养耗尽的生长培养基、升高的温度和有毒化合物的存在。此外,可以确定生长过程的动力学和量化酵母复制,这是通过测量一个突变的温度敏感菌株来证明的。这是HTM首次用于实时测定影响微生物生长的因素。热感测是低成本的,提供直接的分析和测量,可以在现场进行。由于该方法的通用性,该平台可以扩展到监测其他微生物,特别是研究细菌对选定抗生素的反应。
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引用次数: 16
Assessment of Monte Carlo Geant4 capabilities in prediction of photon beam dose distribution in a heterogeneous medium 评价蒙特卡罗Geant4在非均匀介质中预测光子束剂量分布的能力
Q3 Medicine Pub Date : 2018-06-01 DOI: 10.1016/j.phmed.2017.08.001
Jaafar EL Bakkali , Abderrahim Doudouh , Hamid Mansouri

The aim of this study is the assessment of the Geant4 capabilities in accurately modeling of dose distribution in a heterogeneous water phantom. In this purpose, a Geant4 user code has been designed and developed to enable an accurate modeling of cross beam profiles in a heterogeneous water phantom deposited by a 12 MV photon beam emitted by a Saturne 43 Linac head and configuring a 10 × 10 cm2 radiation field. The calculated cross beam profiles at two distinct depths (22 cm and 25 cm), were compared to the ones obtained with MCNPX code. Our findings show that the shapes of dosimetric curves at two distinct depths calculated with Geant4 code and the ones obtained by MCNPX code are in a very good agreement. However, the Geant4 code seems painfully slow when calculating those dosimetric curves and its associated statistical uncertainties don't seem to reach 1% after two weeks of calculations. To deal with this issue, we suggest that a new variance reduction technique specially addressed for dose calculation in a heterogeneous medium must be developed by the Geant4 collaboration, in order to decrease the required computing time and to improve the statistical of calculations.

本研究的目的是评估Geant4在非均匀水影中准确建模剂量分布的能力。为此,设计并开发了一个Geant4用户代码,以实现由Saturne 43直线加速器头发射的12 MV光子束沉积的非均质水影中的交叉光束剖面的精确建模,并配置了10 × 10 cm2的辐射场。计算的两个不同深度(22 cm和25 cm)的横梁轮廓与MCNPX代码的计算结果进行了比较。结果表明,用Geant4程序计算的两个不同深度的剂量学曲线形状与MCNPX程序计算的曲线形状吻合得很好。然而,在计算这些剂量曲线时,Geant4代码似乎慢得令人痛苦,其相关的统计不确定性在计算两周后似乎没有达到1%。为了解决这一问题,我们建议必须由Geant4合作开发一种专门针对非均匀介质中剂量计算的新的方差减少技术,以减少所需的计算时间并提高计算的统计性。
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引用次数: 3
Flexible perovskite based X-ray detectors for dose monitoring in medical imaging applications 柔性钙钛矿x射线探测器,用于医学成像应用中的剂量监测
Q3 Medicine Pub Date : 2018-06-01 DOI: 10.1016/j.phmed.2018.04.001
Hardeep Singh Gill , Bassem Elshahat , Akshay Kokil , Lian Li , Ravi Mosurkal , Piotr Zygmanski , Erno Sajo , Jayant Kumar

Organometallic halide perovskite materials are attracting considerable interest for high performance photovoltaic and photodetector applications due to their exceptional opto-electronic properties and easy processing capability. The high atomic numbers (Z) of their constituents also make these materials suitable for X-ray detection. Here we report on the direct detection of X-ray induced photocurrents in flexible organolead halide perovskite based detectors. The electrical response of the detectors was found to be linear with the radiation dosage. These perovskite based radiation detectors were about 550% more sensitive than commonly used amorphous silicon solar devices. The high sensitivity to the X-rays could be attributed to the high Z constituents and large charge carrier mobility. Our results indicate that the perovskite materials are promising candidates for direct X-ray detectors.

有机金属卤化物钙钛矿材料由于其优异的光电性能和易于加工的能力,在高性能光伏和光电探测器应用中引起了相当大的兴趣。其成分的高原子序数(Z)也使这些材料适合x射线探测。本文报道了在柔性卤化有机铅钙钛矿基探测器中直接探测x射线诱导光电流的方法。发现探测器的电响应与辐射剂量成线性关系。这些钙钛矿辐射探测器的灵敏度比常用的非晶硅太阳能器件高550%。对x射线的高灵敏度可归因于高Z组分和大载流子迁移率。我们的研究结果表明,钙钛矿材料是直接x射线探测器的有希望的候选者。
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引用次数: 56
Regional body fat distribution assessment by bioelectrical impedance analysis and its correlation with anthropometric indices 生物电阻抗分析法评估局部体脂分布及其与人体测量指标的相关性
Q3 Medicine Pub Date : 2018-06-01 DOI: 10.1016/j.phmed.2018.02.001
Haval Y. Yacoob Aldosky , Abdulkadir Yildiz , Haliz A. Hussein

Objective

The purpose of this study is to assess the validity of Bioelectrical Impedance Analysis (BIA) to characterize the regional fat distribution among female and its correlation with anthropometric indices.

Materials and methods

The following indices were carried out: weight, height, body mass index (BMI), waist circumference (WC), hip circumference (HC), waist hip index (WC + HC) of random samples (209) of women (age, 32–85 years). The segmental body fat percentages were assessed by bioelectrical impedance analysis. Hand-to-Hand and Foot-to-Foot Body Analyzer devices were used to estimate upper and lower body fat percent (BF %), respectively. Upper and lower body fat measurements were used to calculate total body fat. Agreement between the variables was assessed by scatter plots.

Results

The plots of upper and lower percent body fat (BF %) against waist and hip circumferences revealed significant correlation values of (r = 0.949) and (r = 0.942), respectively. The total of upper and lower body fat ratios showed a stronger correlation with the BMI than those of severally. Weak to fear correlations between upper and lower body fat percent, with BMI were observed.

Conclusion

The results indicated that the BIA technique of estimating segmental body fat percent associated with the anthropometrical indices (WC, HC) has the potential to determine adiposity risk available for use in large epidemiological studies.

目的评价生物阻抗分析(BIA)在女性脂肪区域分布特征及其与人体测量指标的相关性中的有效性。材料与方法随机抽取年龄32 ~ 85岁的女性209例,进行体重、身高、体质指数(BMI)、腰围(WC)、臀围(HC)、腰臀指数(WC + HC)等指标的测定。采用生物电阻抗法测定节段体脂率。使用手对手和脚对脚身体分析仪分别估计上体和下体脂肪百分比(BF %)。上体和下体脂肪测量值用于计算总体脂肪。通过散点图评估变量之间的一致性。结果上、下体脂率(BF %)与腰、臀围曲线的相关值分别为(r = 0.949)和(r = 0.942)。上体脂肪比和下体脂肪比的总和与身体质量指数的相关性比个别的强。观察到上半身和下半身脂肪百分比与BMI之间的弱至恐惧相关性。结论BIA技术与人体测量指数(WC, HC)相关,具有确定肥胖风险的潜力,可用于大型流行病学研究。
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引用次数: 6
A hypothesis of series resonance in the white matter for understanding the mechanism of spike-wave seizures 白质串联共振假说用于理解棘波发作机制
Q3 Medicine Pub Date : 2018-06-01 DOI: 10.1016/j.phmed.2017.12.001
Shigeki Sadahiro

Generalized epilepsy is accompanied by large-amplitude synchronized spike-wave discharges on electroencephalography. The condition rapidly and synchronously involves most regions of the brain, but the mechanism underlying this global involvement remains unclear. Here I attempt to clarify this phenomenon by hypothesizing a series resonance in an equivalent electric circuit for the white matter. This hypothesis is based on the ideas that the electric conduction along an axon is due to the displacement current, and the unit structure composed of a node of Ranvier and the next node can be regarded as a capacitor or an inductor, depending on the geometry and the substance around the nodes. The flash-visual evoked potentials at various flash repetition rates were measured in generalized epilepsy patients, and compared with those for healthy controls and focal epilepsy patients. The P100 amplitude plotted against the flash repetition rate had a maximum peak at a certain flash repetition rate only for each of the generalized epilepsy patients. The observation of a peak in the P100 amplitude was inferred to reflect the series resonance phenomenon in the white matter. I speculate that patients with generalized epilepsy have large regions of white matter with similar resonance frequencies.

在脑电图上,全身性癫痫伴有大幅度的同步尖波放电。这种情况迅速而同步地涉及到大脑的大部分区域,但这种全球参与的机制尚不清楚。在这里,我试图通过假设白质等效电路中的一系列共振来澄清这一现象。这个假设是基于沿轴突的电传导是由于位移电流,由一个朗维耶节点和下一个节点组成的单元结构可以看作是电容器或电感器,这取决于节点周围的几何形状和物质。测量了全面性癫痫患者在不同闪烁重复频率下的闪烁视觉诱发电位,并与健康对照和局灶性癫痫患者进行了比较。P100振幅与闪烁重复率的关系仅在每个广泛性癫痫患者的特定闪烁重复率处出现最大峰值。P100振幅出现一个峰,反映了白质的串联共振现象。我推测全身性癫痫患者的白质区域有相似的共振频率。
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引用次数: 1
Real-time monitoring of interactions between Ebola fusion peptide and solid-supported phospholipid membranes: Effect of peptide concentration and layer geometry 埃博拉融合肽与固体支撑磷脂膜相互作用的实时监测:肽浓度和层几何形状的影响
Q3 Medicine Pub Date : 2017-12-01 DOI: 10.1016/j.phmed.2017.06.001
M. Khorshid , P. Losada-Pérez , G. Wackers , D. Yongabi , F.U. Renner , R. Thoelen , P. Wagner

The pathogenesis of the Ebola virus which leads to a severe hemorrhagic fever in hosts is a very complex process which is not completely understood. Glycoproteins of the viral envelope are believed to play a crucial role in receptor binding and subsequently in fusion of the virus with the target cells of the host. As a result, the virus enters the cells and replicates. This process causes further cytopathic, and pathological reactions in the host's body. To gain further insights into the fusogenic interactions of the virus with cell membranes, we used well-controlled simple biomimetic systems, consisting of solid-supported phospholipid layers together with a small sequence of the viral glycoprotein (EBO17), which is believed to be the most important part responsible for viral pathogenesis. We monitor the real-time interaction of a EBO17 peptide sequence from the Ebola virus with dipalmitoylphosphatidylcholine (DMPC) phospholipid membranes using quartz crystal microbalance with dissipation monitoring (QCM-D) as a label-free method. In particular, we focus on the influence of the concentration of the peptide and the lipid layer geometry on the disrupting mechanism of the EBO17 peptide. Results indicate that for 2D supported lipid bilayers, low peptide concentrations induce a small, but detectable change in layer stability due to the presence of an α-helix configuration of the peptide. With large peptide concentrations, the peptide acquires a β-sheet configuration and no significant layer changes can be observed. A different mechanism is responsible for the interaction of the EBO17 peptides with the more complex 3D supported vesicle layers, for which a concentration-dependent trend can be observed leading to thicker lipid layers. Complementary analysis of the lipids' main phase transition evidences the differences induced in layer organization on the two layer geometries. These results confirm the importance of the interplay between lipid layer geometry and related peptide organization as an essential marker in peptide activity.

导致宿主严重出血热的埃博拉病毒的发病机制是一个非常复杂的过程,目前尚未完全了解。病毒包膜的糖蛋白被认为在受体结合和随后的病毒与宿主靶细胞融合中起着至关重要的作用。结果,病毒进入细胞并复制。这个过程在宿主体内引起进一步的细胞病变和病理反应。为了进一步了解病毒与细胞膜的融合相互作用,我们使用了控制良好的简单仿生系统,由固体支撑的磷脂层和病毒糖蛋白(EBO17)的一小段序列组成,这被认为是病毒发病机制中最重要的部分。我们利用石英晶体微平衡耗散监测(QCM-D)作为无标记方法,实时监测了埃博拉病毒EBO17肽序列与双棕榈酰磷脂酰胆碱(DMPC)磷脂膜的相互作用。我们特别关注肽浓度和脂质层几何形状对EBO17肽破坏机制的影响。结果表明,对于二维支撑脂质双层,由于肽的α-螺旋结构的存在,低肽浓度诱导了层稳定性的微小但可检测的变化。当肽浓度较大时,肽获得β-片结构,未观察到明显的层变化。EBO17肽与更复杂的3D支持囊泡层的相互作用有不同的机制,可以观察到浓度依赖的趋势,导致更厚的脂质层。脂质主要相变的互补分析证明了两层几何结构上的层组织差异。这些结果证实了脂质层几何形状和相关肽组织之间的相互作用作为肽活性的重要标志的重要性。
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引用次数: 8
Neural stem cells influenced by ultrasound: Frequency and energy density dependencies 超声对神经干细胞的影响:频率和能量密度依赖性
Q3 Medicine Pub Date : 2017-12-01 DOI: 10.1016/j.phmed.2017.09.001
Anne Schuster , Holger Rabe , Tanja Schwab , Michael Bischof , Christian Degel , Markus Klotz , Karl-Herbert Schäfer

Therapeutic ultrasound is a widely used application in clinics. The response to ultrasound is tissue specific and the parameters of ultrasonic treatments are decisive. Here, the responses of primary enteric (ENS) and central nervous system (CNS) neural stem cells were investigated to different frequency – energy density – combination treatments between 510 kHz–3 W s/cm2 and 4.36 MHz–25 W s/cm2. Responses to ultrasonic treatments were both frequency and energy density dependent. Ultrasound enhanced the expansion and showed enlarged neurospheres for both ENS and CNS neural stem cell cultures. Differentiation was not impaired in regard to neuronal and glial cell number as well as neurite and glial fiber outgrowth. Ultrasound is a promising tool to expand neural stem cells in vitro neither influencing neurogenesis nor gliogenesis by applying specific frequency – energy density – combinations.

超声治疗在临床上有着广泛的应用。超声的反应是组织特异性的,超声治疗的参数是决定性的。本研究研究了原代肠(ENS)和中枢神经系统(CNS)神经干细胞对510 kHz-3 W s/cm2和4.36 MHz-25 W s/cm2之间不同频率-能量密度组合处理的反应。对超声治疗的反应与频率和能量密度有关。超声增强了ENS和CNS神经干细胞培养的扩增并显示增大的神经球。在神经元和神经胶质细胞数量以及神经突和神经胶质纤维的生长方面,分化未受到损害。超声是体外扩增神经干细胞的一种很有前途的工具,既不影响神经发生,也不影响胶质瘤的发生,通过应用特定的频率-能量密度组合。
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引用次数: 3
Suction force-suction distance relation during aspiration thrombectomy for ischemic stroke: A computational fluid dynamics study 缺血性卒中吸入性取栓术中吸力-吸力距离关系的计算流体动力学研究
Q3 Medicine Pub Date : 2017-06-01 DOI: 10.1016/j.phmed.2016.11.001
Yubing Shi , David Cheshire , Frank Lally , Christine Roffe

Acute Ischemic Stroke (AIS) is the major type of stroke occurring in patients. Aspiration thrombectomy, which uses suction to remove the thrombosis, is a promising technique in the clinical treatment of AIS patients. In this research a computational fluid dynamics (CFD) analysis was conducted to model the blood flow dynamics in a simplified cerebral model during an aspiration thrombectomy procedure. The flow system being analysed was a typical in vitro cerebral flow model, and the system parameters were set based on the clinical and in vitro data reported in open literature. The simulated flow field features showed good correlation with the in vitro response as reported in literature. The CFD study provides detailed technical data including the peak velocity occurring at the catheter tip and the suction force-suction distance relation during the aspiration thrombectomy procedure, which are useful new knowledge and have the potential to influence future catheter design as well as clinical operational protocols used during thrombectomy intervention.

急性缺血性脑卒中(Acute Ischemic Stroke, AIS)是发生在患者中的主要脑卒中类型。吸入性取栓术是一种利用吸力清除血栓形成的技术,是临床上治疗AIS患者的一种很有前途的技术。在这项研究中,计算流体动力学(CFD)分析进行了模拟在一个简化的脑模型在吸入性取栓过程中的血流动力学。所分析的血流系统是一个典型的体外脑血流模型,系统参数是根据公开文献报道的临床和体外数据设置的。模拟的流场特征与文献报道的体外反应具有良好的相关性。CFD研究提供了详细的技术数据,包括导管尖端出现的峰值速度和吸力-吸力距离在吸入性取栓过程中的关系,这是有用的新知识,有可能影响未来的导管设计以及在取栓干预过程中使用的临床操作方案。
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引用次数: 22
Acoustical properties in inhaling singing: A case-study 吸入歌唱的声学特性:个案研究
Q3 Medicine Pub Date : 2017-06-01 DOI: 10.1016/j.phmed.2017.02.001
Françoise Vanhecke , Mieke Moerman , Frank Desmet , Joren Six , Kristin Daemers , Godfried-Willem Raes , Marc Leman

A highly experienced versatile female professional singer displaying no apparent vocal complaint, developed inhaling singing, an innovative approach to reverse phonation. Although there are some reports in literature that describe the characteristics of ingressive phonation and sounds, to the best of our knowledge, no reports on actual inhaling singing are available in literature. This paper reports a case study on the acoustical analysis of inhaling singing, comparing this innovative technique with traditional exhaling singing. As this is rather undiscovered territory, we have decided to address several questions: is it possible to match the same pitches using inhaling singing compared to exhaling singing? Is the harmonic structure and energy distribution similar? Is it possible to maintain the same phonation duration in both techniques? Are there differences in volume and tessitura (vocal range)? This paper, reporting on the experience of one individual, demonstrates that a tessitura can be mastered in inhaling singing. Spectral analysis reveals a similar frequency distribution in both conditions. However, in inhaling singing the energy of the harmonics is significantly lower for the first 3 overtones, while the maximum phonation time is larger, than in exhaling singing. The singer reports that less effort is required for inhaling singing in the high register. As such, inhaling singing offers new possibilities for vocal performance.

一位经验丰富的全能女专业歌手,没有明显的声音抱怨,发展了吸气式演唱,一种创新的反发声方法。虽然文献中有一些报道描述了吸气式发音和声音的特征,但据我们所知,文献中没有关于实际吸气式唱歌的报道。本文对吸气式歌唱的声学分析进行了案例研究,并将这种创新技术与传统的呼气式歌唱进行了比较。由于这是一个相当未被发现的领域,我们决定解决几个问题:与呼气唱歌相比,吸气唱歌是否有可能匹配相同的音高?谐波结构和能量分布是否相似?在这两种技术中是否有可能保持相同的发声时长?音量和音域(音域)有区别吗?这篇文章,报告了一个人的经验,证明了一个织体可以在吸气唱歌中被掌握。频谱分析显示两种情况下频率分布相似。然而,在吸气式演唱中,前3个泛音的谐波能量明显低于呼气式演唱,而最大发声时间则大于呼气式演唱。歌手报告说,在高音区吸气所需的努力更少。因此,吸气式歌唱为声乐表演提供了新的可能性。
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引用次数: 4
Sound-induced motility of outer hair cells explained by stochastic resonance in nanometric sensors in the lateral wall 外毛细胞的声致运动由外侧壁纳米传感器的随机共振解释
Q3 Medicine Pub Date : 2016-12-01 DOI: 10.1016/j.phmed.2016.06.001
Einat Shapira , Rémy Pujol , Michael Plaksin , Eitan Kimmel

The mechanism of mammalian hearing has intrigued scientists for decades. It is widely assumed that the process of hearing begins when sound reaches the inner ear and causes the basilar membrane (BM) to vibrate. These vibrations are then detected and consequently amplified by the outer hair cells (OHCs). We question this sequence of events and the inauguration of sound-induced motility, i.e. transformation of sound pressure wave into directional vibrations. Based on the morphology of the mammalian cochlea, we suggest that motility of the OHCs could be due to the synchronized action of hundreds of thousands of nanometric acoustic sensors-actuators in the OHC’s lateral wall. We propose that stochastic resonance in these nanometric units can account for all of the major features of mammalian hearing: a wide dynamic range; sharp frequency selectivity; generation of spontaneous otoacoustic emissions; and the ability to process relatively high frequencies. The proposed model might inspire the design of hypersensitive sensors and actuators, which potentially could be incorporated into new types of hearing aids.

几十年来,哺乳动物的听觉机制一直吸引着科学家。人们普遍认为,当声音到达内耳并引起基底膜(BM)振动时,听力过程开始。这些振动随后被外毛细胞(ohc)检测并放大。我们质疑这一系列事件和声诱导运动的开始,即声压波转化为定向振动。基于哺乳动物耳蜗的形态,我们认为耳蜗外腔的运动可能是由于耳蜗外腔壁上数十万个纳米声学传感器的同步作用。我们认为这些纳米单位的随机共振可以解释哺乳动物听力的所有主要特征:宽动态范围;锐利的频率选择性;自发耳声发射的产生;以及处理相对高频率的能力。所提出的模型可能会启发超敏传感器和致动器的设计,这可能会被纳入新型助听器。
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引用次数: 1
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Physics in Medicine
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