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CRISPR as agent: a metaphor that rhetorically inhibits the prospects for responsible research. 作为代理人的 CRISPR:一个在言辞上抑制负责任研究前景的隐喻。
IF 3.1 Q1 Arts and Humanities Pub Date : 2018-11-13 DOI: 10.1186/s40504-018-0088-8
Leah Ceccarelli

In 2015, a group of 18 scientists and bioethicists published an editorial in Science calling for "open discourse on the use of CRISPR-Cas9 technology to manipulate the human genome" and recommending that steps be taken to strongly discourage "any attempts at germline genome modification" in humans with this powerful new technology. Press reports compared the essay to a letter written by Paul Berg and 10 other scientists in 1974, also published in Science, calling for a voluntary deferral of certain types of recombinant DNA experimentation. A rhetorical analysis of the metaphors in these two documents, and in the summary statements that came out of the respective National Academy of Sciences conferences they instigated, shows that while they have a lot in common, they are different in at least one important way. The more recent texts deploy conceptual metaphors that portray the biotechnology in question as an autonomous agent, subtly suggesting an inevitability to its development, in contrast to the earlier texts, which portray the scientists who are using the technology as the primary agents who take action. Rhetorical moves depicting biotechnology as an agent in the 2015 texts hint at contemporary skepticism about whether humans can restrain the forward momentum of science and technology in a global context, thus inhibiting scientists from imagining a consequential role for themselves in shaping the future of responsible research.

2015年,一个由18名科学家和生物伦理学家组成的小组在《科学》杂志上发表了一篇社论,呼吁 "就使用CRISPR-Cas9技术操纵人类基因组展开公开讨论",并建议采取措施,坚决阻止利用这种强大的新技术在人类身上 "进行任何种系基因组改造的尝试"。媒体报道将这篇文章与 1974 年保罗-伯格(Paul Berg)和其他 10 位科学家写的一封信(也发表在《科学》杂志上)进行了比较,后者呼吁自愿推迟某些类型的 DNA 重组实验。通过对这两份文件中的隐喻,以及它们分别发起的美国国家科学院会议上发表的总结性声明中的隐喻进行修辞分析,可以发现它们虽然有很多共同点,但至少在一个重要方面有所不同。较新的文本使用了概念隐喻,将有关生物技术描绘成一个自主的主体,巧妙地暗示了其发展的必然性,而较早的文本则将使用该技术的科学家描绘成采取行动的主要主体。在 2015 年的文本中,将生物技术描绘成代理人的修辞手法暗示了当代人对人类是否能在全球范围内抑制科技发展势头的怀疑态度,从而抑制了科学家对自己在塑造负责任研究的未来中发挥重要作用的想象。
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引用次数: 0
Understanding the emotion of shame in transgender individuals - some insight from Kafka. 理解跨性别者的羞耻感——来自卡夫卡的一些见解。
IF 3.1 Q1 Arts and Humanities Pub Date : 2018-10-01 DOI: 10.1186/s40504-018-0085-y
Simona Giordano

Both clinical literature and biographical accounts suggest that many transgender individuals experience shame or have experienced shame at some point in their life for reasons related to their gender identity. In clinical psychology, at least until the 1960s, shame has not received much attention; focus was on guilt and shame was regarded mainly as a 'by-product' of guilt. From the 1960s shame has been identified as an emotion not necessarily related to guilt and with unique features, and has been studied in connection with a number of situations, such as domestic abuse, trauma, illness, and sexual orientation. However shame has been studied less in connection with gender variance. Shame has however intrigued philosophers, writers and artists for a very long time. Yet, the importance of the contribution of various disciplines to the understanding of the experience of shame in vulnerable individuals has been overlooked. This paper attempts to explore the meaning of shame for transgender individuals, by making reference not only to clinical studies, but also to artworks and literary novels. Franz Kafka, named "the poet of shame" is particularly salient to the analysis of shame, and some of his works will enable us to shed light on the complexities of the experience of shame in transgender individuals which may defy clinical observation.

临床文献和传记都表明,许多跨性别者在他们生命中的某个阶段因为与他们的性别认同有关的原因而感到羞耻或曾经感到羞耻。在临床心理学中,至少在20世纪60年代之前,羞耻感并没有受到太多关注;人们关注的是负罪感,羞耻感主要被视为负罪感的“副产品”。从20世纪60年代开始,羞耻感就被认为是一种与内疚无关的情感,具有独特的特征,并被研究与许多情况有关,如家庭虐待、创伤、疾病和性取向。然而,羞耻感与性别差异的关系研究较少。然而,羞耻在很长一段时间内引起了哲学家、作家和艺术家的兴趣。然而,各种学科对理解弱势个体羞耻体验的贡献的重要性被忽视了。本文试图通过临床研究,以及艺术作品和文学小说来探讨跨性别者羞耻的意义。被称为“羞耻诗人”的弗朗茨·卡夫卡对羞耻的分析尤为突出,他的一些作品将使我们能够揭示跨性别者羞耻经历的复杂性,这可能是临床观察所无法做到的。
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引用次数: 14
How to do things with metaphors: engineering life as hodgepodge. 如何用隐喻做事:把生活想象成大杂烩。
IF 3.1 Q1 Arts and Humanities Pub Date : 2018-09-17 DOI: 10.1186/s40504-018-0084-z
Matthew Kearnes, Declan Kuch, Angus Johnston

This paper presents a collaboration between social scientists and a chemist exploring the promises for new therapy development at the intersection between synthetic biology and nanotechnology. Drawing from ethnographic studies of laboratories and a recorded discussion between the three authors, we interrogate the metaphors that underpin what Mackenzie (Futures 48:5-12 2013) has identified as a recursive relationship in the iconography of the life sciences and its infrastructure. Focusing specifically on the use of gene editing techniques in synthetic biology and bio-nanotechnology, we focus our analysis on the key metaphors of 'evolutionary life as hodge-podge' within which 'cutting' of DNA and the 'sticking' and 'binding' of engineered particles to proteins can be performed by researchers in laboratory settings. Taken together, we argue that these metaphors are consequential for understanding metaphors of life-as-machine and the prevalence of notions of 'engineering life'. Exploring the ways in which notions of cutting, targeting and life as an evolutionary hodgepodge prefigure a more contingent notion of engineering and synthesis we close by considering the interpretive implications for ethnomethodological approaches to contemporary life science research.

本文介绍了社会科学家和一位化学家之间的合作,他们在合成生物学和纳米技术的交叉点上探索新疗法的发展前景。根据实验室的人种学研究和三位作者之间的讨论记录,我们质疑了Mackenzie(Futures 48:5-12 2013)在生命科学及其基础设施的图像学中所认定的递归关系的隐喻。特别关注基因编辑技术在合成生物学和生物纳米技术中的应用,我们将分析重点放在“进化生活大杂烩”的关键隐喻上,研究人员可以在实验室环境中进行DNA的“切割”以及工程颗粒与蛋白质的“粘附”和“结合”。总之,我们认为这些隐喻对于理解生命作为机器的隐喻和“工程生命”概念的流行是重要的。探索切割、靶向和生命作为一个进化大杂烩的概念预示着一个更偶然的工程和综合概念的方式,我们通过考虑对当代生命科学研究的民族方法论方法的解释意义来结束。
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引用次数: 0
Constructing future scenarios as a tool to foster responsible research and innovation among future synthetic biologists. 构建未来场景,作为促进未来合成生物学家负责任研究和创新的工具。
IF 3.1 Q1 Arts and Humanities Pub Date : 2018-09-10 DOI: 10.1186/s40504-018-0082-1
Afke Wieke Betten, Virgil Rerimassie, Jacqueline E W Broerse, Dirk Stemerding, Frank Kupper

The emerging field of synthetic biology, the (re-)designing and construction of biological parts, devices and systems for useful purposes, may simultaneously resolve some issues and raise others. In order to develop applications robustly and in the public interest, it is important to organize reflexive strategies of assessment and engagement in early stages of development. Against this backdrop, initiatives related to the concept of Responsible Research and Innovation (RRI) have also appeared. This paper describes such an initiative: the construction of future scenarios to explore the plausibility and desirability of potential synthetic biology innovations. We guided teams of synthetic biology students who participated in the large international Genetically Engineered Machines (iGEM) competition, in constructing scenarios aimed at exploring the plausibility and desirability of potential synthetic biology innovations. In this paper we aim to examine to what extent, and how, constructing such future scenarios contributes to RRI. In order to do so, we conducted observations and interviews to understand what kind of learning and reflection was promoted by constructing the scenarios in terms of four dimensions, which are discussed prominently in the literature on RRI: anticipation, inclusion, reflexivity and responsiveness. While we focus on how constructing future scenarios can contribute to strengthening RRI at a project (and individual) level, we also consider how far our experiment may foster RRI in the iGEM competition in general, and perhaps even inspire constructive collaboration between 'social scientists' and 'natural scientists' in the context of larger scientific research programmes.

合成生物学的新兴领域,即为有用目的设计和构建生物部件、装置和系统,可能会同时解决一些问题,也会提出其他问题。为了有力地开发应用程序并符合公众利益,在开发的早期阶段组织反射性评估和参与策略是很重要的。在这种背景下,与负责任研究与创新(RRI)概念相关的举措也出现了。本文描述了这样一个倡议:构建未来场景,以探索潜在的合成生物学创新的合理性和可取性。我们指导参加大型国际基因工程机器(iGEM)竞赛的合成生物学学生团队构建场景,旨在探索潜在合成生物学创新的合理性和可取性。在本文中,我们旨在研究构建这样的未来场景在多大程度上以及如何对RRI做出贡献。为了做到这一点,我们进行了观察和采访,以了解通过从四个维度构建场景来促进什么样的学习和反思,这在RRI文献中有突出的讨论:预期、包容、自反和反应。在我们关注构建未来情景如何有助于在项目(和个人)层面加强RRI的同时,我们还考虑了我们的实验在iGEM竞争中可以在多大程度上促进RRI,甚至可能在更大的科学研究计划中激发“社会科学家”和“自然科学家”之间的建设性合作。
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引用次数: 19
The governance structure for data access in the DIRECT consortium: an innovative medicines initiative (IMI) project. DIRECT联盟中数据访问的治理结构:创新药物倡议(IMI)项目。
IF 3.1 Q1 Arts and Humanities Pub Date : 2018-09-04 DOI: 10.1186/s40504-018-0083-0
Harriet J A Teare, Federico de Masi, Karina Banasik, Anna Barnett, Sanna Herrgard, Bernd Jablonka, Jacqueline W M Postma, Timothy J McDonald, Ian Forgie, Piotr J Chmura, Emil K Rydzka, Ramneek Gupta, Soren Brunak, Ewan Pearson, Jane Kaye

Biomedical research projects involving multiple partners from public and private sectors require coherent internal governance mechanisms to engender good working relationships. The DIRECT project is an example of such a venture, funded by the Innovative Medicines Initiative Joint Undertaking (IMI JU). This paper describes the data access policy that was developed within DIRECT to support data access and sharing, via the establishment of a 3-tiered Data Access Committee. The process was intended to allow quick access to data, whilst enabling strong oversight of how data were being accessed and by whom, and any subsequent analyses, to contribute to the overall objectives of the consortium.

涉及公共和私营部门多个合作伙伴的生物医学研究项目需要连贯的内部治理机制,以建立良好的工作关系。DIRECT项目就是这样一个由创新药物倡议联合企业(IMI JU)资助的项目。本文介绍了DIRECT内部制定的数据访问政策,该政策旨在通过建立三级数据访问委员会来支持数据访问和共享。该过程旨在允许快速访问数据,同时能够对数据的访问方式、访问人以及任何后续分析进行强有力的监督,以促进联盟的总体目标。
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引用次数: 8
Creating life and the media: translations and echoes. 创造生活与媒体:翻译与呼应。
IF 3.1 Q1 Arts and Humanities Pub Date : 2018-08-20 DOI: 10.1186/s40504-018-0087-9
Manuel Porcar, Juli Peretó

Synthetic biology is the engineering view on biotechnology that ultimately aims at fulfilling the quest of building an artificial cell. From the very first attempts of synthesizing life, this subject has made an impact on the media through, very often, misleading headlines and news. We review here the historical journalistic approach on synthetic biology and related disciplines, from the early twentieth century to the lastest achievements on designing protocells or genome reduction. However, it would be very naive to consider the research community and the media to be unidirectionally linked, with the latter being mere displayers (and disrupters) of the research "reality". On the contrary, the research community has also received a strong influence from the media, as evidenced by statements from researchers, common metaphors and, even, a trend to unconsciously develop shared techno-social paradigms. We conclude that, beyond overstatements from researchers and journalists' misunderstandings, both communities provide strong feedback to each other and, together, contribute to define the dream that synthetic biologists are aiming for.

合成生物学是对生物技术的工程学观点,其最终目标是实现构建人造细胞的追求。从合成生命的第一次尝试开始,这个主题就经常通过误导性的标题和新闻对媒体产生影响。我们在这里回顾了合成生物学和相关学科的历史新闻方法,从20世纪初到设计原始细胞或基因组还原的最新成就。然而,如果认为研究界和媒体是单向联系的,后者仅仅是研究“现实”的展示者(和破坏者),那就太天真了。相反,研究界也受到了媒体的强烈影响,研究人员的陈述、常用的隐喻,甚至无意识地发展出共享的技术社会范式的趋势都证明了这一点。我们得出的结论是,除了科学家和记者的误解所造成的夸大之外,这两个群体相互提供了强有力的反馈,并且共同为定义合成生物学家所追求的梦想做出了贡献。
{"title":"Creating life and the media: translations and echoes.","authors":"Manuel Porcar,&nbsp;Juli Peretó","doi":"10.1186/s40504-018-0087-9","DOIUrl":"https://doi.org/10.1186/s40504-018-0087-9","url":null,"abstract":"<p><p>Synthetic biology is the engineering view on biotechnology that ultimately aims at fulfilling the quest of building an artificial cell. From the very first attempts of synthesizing life, this subject has made an impact on the media through, very often, misleading headlines and news. We review here the historical journalistic approach on synthetic biology and related disciplines, from the early twentieth century to the lastest achievements on designing protocells or genome reduction. However, it would be very naive to consider the research community and the media to be unidirectionally linked, with the latter being mere displayers (and disrupters) of the research \"reality\". On the contrary, the research community has also received a strong influence from the media, as evidenced by statements from researchers, common metaphors and, even, a trend to unconsciously develop shared techno-social paradigms. We conclude that, beyond overstatements from researchers and journalists' misunderstandings, both communities provide strong feedback to each other and, together, contribute to define the dream that synthetic biologists are aiming for.</p>","PeriodicalId":37861,"journal":{"name":"Life Sciences, Society and Policy","volume":"14 1","pages":"19"},"PeriodicalIF":3.1,"publicationDate":"2018-08-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s40504-018-0087-9","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"36411705","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 7
Evolutionary tinkering vs. rational engineering in the times of synthetic biology. 合成生物学时代的进化修修补补与理性工程。
IF 3.1 Q1 Arts and Humanities Pub Date : 2018-08-12 DOI: 10.1186/s40504-018-0086-x
Víctor de Lorenzo

Synthetic biology is not only a contemporary reformulation of the recombinant DNA technologies of the last 30 years, combined with descriptive language imported from electrical and industrial engineering. It is also a new way to interpret living systems and a statement of intent for the use and reprogramming of biological objects for human benefit. In this context, the notion of designer biology is often presented as opposed to natural selection following the powerful rationale formulated by François Jacob on evolution-as-tinkering. The onset of synthetic biology opens a different perspective by leaving aside the question about the evolutionary origin of biological phenomena and focusing instead on the relational logic and the material properties of the corresponding components that make biological system work as they do. Once a functional challenge arises, the solution space for the problem is not homogeneous but it has attractors that can be accessed either through random exploration (as evolution does) or rational design (as engineers do). Although these two paths (i.e. evolution and engineering) are essentially different, they can lead to solutions to specific mechanistic bottlenecks that frequently coincide or converge-and one can easily help to understand and improve the other. Alas, productive discussions on these matters are often contaminated by ideological preconceptions that prevent adoption of the engineering metaphor to understand and ultimately reshape living systems-as ambitioned by synthetic biology. Yet, some possible ways to overcome the impasse are feasible. In parallel to Monod's evolutionary paradox of teleo-logy (finality/purpose) vs. teleo-nomy (appearance of finality/purpose), a mechanistic paradox could be entertained between techno-logy (rational engineering) vs techno-nomy (appearance of rational engineering), all for the sake of understanding the relational logic that enables live systems to function as physico-chemical entities in time and space. This article thus proposes a radical vision of synthetic biology through the lens of the engineering metaphor.

合成生物学不仅是对过去30年的重组DNA技术的当代重新表述,还结合了从电气和工业工程中引入的描述性语言。这也是一种解释生命系统的新方法,也是一种为人类利益而使用和重新编程生物物体的意图声明。在这种背景下,设计师生物学的概念经常被呈现为与自然选择相反的观点,这一观点遵循了弗朗索瓦·雅各布关于进化即修补的强有力的理论基础。合成生物学的开始开启了一个不同的视角,它把生物现象的进化起源问题放在一边,转而关注使生物系统正常工作的相关逻辑和相应组成部分的物质特性。一旦功能性挑战出现,问题的解决方案空间就不是同质的,但它有吸引点,可以通过随机探索(如进化)或理性设计(如工程师)来访问。尽管这两条路径(即进化和工程)本质上是不同的,但它们可以为经常重合或汇合的特定机制瓶颈提供解决方案——其中一条可以很容易地帮助理解和改进另一条。唉,关于这些问题的富有成效的讨论常常被意识形态上的先入之见所污染,这些先入之见阻碍了采用工程隐喻来理解并最终重塑生命系统——正如合成生物学所雄心勃勃的那样。然而,克服僵局的一些可能的方法是可行的。与莫诺德的目的论(最终性/目的)vs目的论(最终性/目的的表象)的进化悖论类似,在技术(理性工程)vs技术经济学(理性工程的表象)之间也可以有一个机械性的悖论,这都是为了理解使生命系统在时间和空间中作为物理-化学实体发挥作用的关系逻辑。因此,本文通过工程隐喻的镜头提出了合成生物学的激进愿景。
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引用次数: 13
Clinical exome sequencing in France and Quebec: what are the challenges? What does the future hold? 法国和魁北克的临床外显子组测序:面临哪些挑战?未来会怎样?
IF 3.1 Q1 Arts and Humanities Pub Date : 2018-08-01 DOI: 10.1186/s40504-018-0081-2
Gabrielle Bertier, Yann Joly

Background: The decreasing cost of next-generation sequencing technologies (NGS) has resulted in their increased use in research, and in the clinic. However, France and Quebec have not yet implemented nation-wide personalized medicine programs using NGS. To produce policies on the large-scale implementation of NGS, decision makers could benefit from a detailed understanding of how these technologies are currently used, their limitations, and the benefits they could bring to patients.

Objectives: We aimed at answering two research questions: How are patients' NGS data currently managed in healthcare institutions in Quebec and in France? What issues do technology users identify which should be solved in order to implement clinical genomics at the national level?

Method: Through a multiple case study method, we analysed interviews and documentation from four teams that use whole-exome sequencing in hybrid clinical research projects focusing on cancer and rare diseases.

Results: Interviewees detailed numerous challenges linked with managing the complexity of the process of collecting and interpreting data in a relevant manner for patients, and described how obtaining buy-in from multiple stakeholders was necessary.

Conclusion: A strong political will is essential for personalized medicine to be implemented efficiently in France and Quebec.

背景:下一代测序技术(NGS)成本的降低导致其在研究和临床中的应用增加。然而,法国和魁北克尚未在全国范围内实施使用NGS的个性化医疗计划。为了制定大规模实施NGS的政策,决策者可以详细了解这些技术目前的使用方式、局限性以及它们可以给患者带来的好处。目的:我们旨在回答两个研究问题:魁北克和法国的医疗机构目前如何管理患者的NGS数据?为了在国家层面实施临床基因组学,技术用户确定了哪些问题需要解决?方法:通过多病例研究方法,我们分析了四个团队的访谈和文件,这些团队在专注于癌症和罕见病的混合临床研究项目中使用全基因组测序。结果:受访者详细描述了与以相关方式管理患者收集和解释数据过程的复杂性相关的许多挑战,并描述了如何获得多个利益相关者的支持是必要的。结论:强烈的政治意愿对于在法国和魁北克有效实施个性化医疗至关重要。
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引用次数: 2
Who are the users of synthetic DNA? Using metaphors to activate microorganisms at the center of synthetic biology. 谁是合成 DNA 的使用者?用隐喻激活合成生物学中心的微生物。
IF 3.1 Q1 Arts and Humanities Pub Date : 2018-07-14 DOI: 10.1186/s40504-018-0080-3
Erika Amethyst Szymanski

Synthetic biology, a multidisciplinary field involving designing and building with DNA, often designs and builds in microorganisms. The role of these microorganisms tends to be understood through metaphors making the microbial cell like a machine and emphasizing its passivity: cells are described as platforms, chassis, and computers. Here, I point to the efficacy of such metaphors in enacting the microorganism as a particular kind of (non-)participant in the research process, and I suggest the utility of employing metaphors that make microorganisms a different kind of thing-active participants, contributors, and even collaborators in scientific research. This suggestion is worth making, I argue, because enabling the activity of the microorganism generates opportunities for learning from microorganisms in ways that may help explain currently unexplained phenomena in synthetic biology and suggest new experimental directions. Moreover, "activating the microorganism" reorients relationships between human scientists and nonhuman experimental participants away from control over nonhuman creatures and toward respect for and listening to them, generating conditions of possibility for exploring what responsible research means when humans try to be responsible toward and even with creatures across species boundaries.

合成生物学是一个涉及 DNA 设计和构建的多学科领域,通常在微生物中进行设计和构建。这些微生物的作用往往是通过一些隐喻来理解的,这些隐喻将微生物细胞比喻成机器,并强调其被动性:细胞被描述成平台、底盘和计算机。在这里,我指出了这些隐喻在将微生物作为研究过程中的一种特殊(非)参与者方面的功效,并建议使用一些隐喻,将微生物作为另一种事物--科学研究中的积极参与者、贡献者甚至合作者--来加以利用。我认为,这一建议值得提出,因为让微生物活跃起来,就有机会向微生物学习,从而帮助解释合成生物学中目前无法解释的现象,并提出新的实验方向。此外,"激活微生物 "重新调整了人类科学家与非人类实验参与者之间的关系,从控制非人类生物转向尊重和倾听非人类生物,从而为探索当人类试图对跨物种生物负责,甚至对它们负责时,负责任的研究意味着什么创造了可能性条件。
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引用次数: 0
Disease surveillance data sharing for public health: the next ethical frontiers. 公共卫生疾病监测数据共享:下一个伦理前沿。
IF 3.1 Q1 Arts and Humanities Pub Date : 2018-07-04 DOI: 10.1186/s40504-018-0078-x
Patty Kostkova

In the recent years, we have been witnessing a digital revolution in public and global health creating unprecedented opportunities for epidemic intelligence and public health emergencies. However, these opportunities created a double edge sword as access to data, quality monitoring and assurance, as well as governance and regulation frameworks for data privacy are lagging behind technological achievements.In this paper we identify three ethical challenges: sharing data across various early warning tools to support risk assessment. Secondly, define the challenges to be addressed by the legal frameworks for public health data sharing to unlock the potential of population-level datasets for research with no impact on citizens privacy. The third challenge lies with stricter regulation of the IT industry with regards to manipulating user data - such an initiative, GDPR, comes to force in the EU in May 2018.

近年来,我们目睹了公共和全球卫生领域的数字革命,为疫情情报和突发公共卫生事件创造了前所未有的机会。然而,这些机会创造了一把双刃剑,因为数据访问、质量监测和保证以及数据隐私的治理和监管框架都落后于技术成就。在本文中,我们确定了三个道德挑战:在各种早期预警工具之间共享数据以支持风险评估。其次,确定公共卫生数据共享法律框架需要解决的挑战,以释放人口层面数据集在不影响公民隐私的情况下用于研究的潜力。第三个挑战是对IT行业在操纵用户数据方面的更严格监管——欧盟将于2018年5月实施GDPR。
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引用次数: 41
期刊
Life Sciences, Society and Policy
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