首页 > 最新文献

21st European Signal Processing Conference (EUSIPCO 2013)最新文献

英文 中文
Windowed iterative estimation of the parameters of a damped complex exponential in noise 噪声中阻尼复指数参数的加窗迭代估计
Pub Date : 2013-09-09 DOI: 10.5281/ZENODO.43590
E. Aboutanios
The estimation of the frequency and decay factor of a single decaying exponential in noise is an important problem that has commanded significant attention in the research literature. In this paper, we examine the performance of computationally simple, yet accurate and robust, discrete Fourier transform based estimators. These estimators employ a coarse search followed by an interpolation step to obtain precise estimates of the parameters. Although their performance initially improves as the number of samples is increased, it reaches a minimum before departing significantly from the Cramer Rao Lower Bound (CRLB). We tackle this problem in this paper and propose a windowing strategy that allows the estimation performance to track the CRLB for a large number of samples. Furthermore, a practical implementation of the proposed method is given. Extensive simulations are reported that demonstrate the effectiveness of the proposed strategy.
噪声中单个衰减指数的频率和衰减因子的估计是一个重要的问题,在研究文献中引起了极大的关注。在本文中,我们研究了计算简单,但准确和鲁棒的离散傅立叶变换估计器的性能。这些估计器采用粗搜索,然后是插值步骤来获得参数的精确估计。虽然它们的性能最初会随着样本数量的增加而提高,但在显著偏离Cramer Rao下限(CRLB)之前,它会达到最小值。我们在本文中解决了这个问题,并提出了一种窗口策略,允许估计性能跟踪大量样本的CRLB。最后给出了该方法的具体实现。大量的仿真报告证明了所提出策略的有效性。
{"title":"Windowed iterative estimation of the parameters of a damped complex exponential in noise","authors":"E. Aboutanios","doi":"10.5281/ZENODO.43590","DOIUrl":"https://doi.org/10.5281/ZENODO.43590","url":null,"abstract":"The estimation of the frequency and decay factor of a single decaying exponential in noise is an important problem that has commanded significant attention in the research literature. In this paper, we examine the performance of computationally simple, yet accurate and robust, discrete Fourier transform based estimators. These estimators employ a coarse search followed by an interpolation step to obtain precise estimates of the parameters. Although their performance initially improves as the number of samples is increased, it reaches a minimum before departing significantly from the Cramer Rao Lower Bound (CRLB). We tackle this problem in this paper and propose a windowing strategy that allows the estimation performance to track the CRLB for a large number of samples. Furthermore, a practical implementation of the proposed method is given. Extensive simulations are reported that demonstrate the effectiveness of the proposed strategy.","PeriodicalId":400766,"journal":{"name":"21st European Signal Processing Conference (EUSIPCO 2013)","volume":"1 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-09-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"132429622","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Localised Capon spectral estimator with application to the processing of NMR signal 局部Capon谱估计在核磁共振信号处理中的应用
Pub Date : 2013-09-09 DOI: 10.5281/ZENODO.43560
Shanglin Ye, E. Aboutanios
In this paper, we present a localised Capon spectral estimator that exhibits improved ability of resolving closely spaced peaks in the frequency domain. Starting with a unitary transformation using the discrete Fourier transform results in signals of interest being localised to small regions of the spectrum. Therefore, the algorithm uses this fact to construct a covariance matrix with low dimensionality, which can be easily inverted. This reduces the number of samples required to be averaged to produce the covariance matrix and as a result allows the spectrum resolution to be improved. In the simulation results, by comparing with the original Capon, the effectiveness of the novel estimator in resolving close peaks is demonstrated using both simulated undamped exponentials and simulated NMR spectroscopy signal (that is damped exponentials).
在本文中,我们提出了一种局部Capon谱估计器,该估计器在频域中具有较强的分辨紧密间隔峰的能力。从使用离散傅里叶变换的幺正变换开始,将感兴趣的信号定位到频谱的小区域。因此,该算法利用这一事实构造了一个低维的协方差矩阵,该协方差矩阵易于反演。这减少了产生协方差矩阵所需的平均样本数量,从而使频谱分辨率得到提高。在仿真结果中,通过与原始Capon的比较,使用模拟的无阻尼指数和模拟的核磁共振波谱信号(即阻尼指数)来证明新估计器在分辨接近峰方面的有效性。
{"title":"Localised Capon spectral estimator with application to the processing of NMR signal","authors":"Shanglin Ye, E. Aboutanios","doi":"10.5281/ZENODO.43560","DOIUrl":"https://doi.org/10.5281/ZENODO.43560","url":null,"abstract":"In this paper, we present a localised Capon spectral estimator that exhibits improved ability of resolving closely spaced peaks in the frequency domain. Starting with a unitary transformation using the discrete Fourier transform results in signals of interest being localised to small regions of the spectrum. Therefore, the algorithm uses this fact to construct a covariance matrix with low dimensionality, which can be easily inverted. This reduces the number of samples required to be averaged to produce the covariance matrix and as a result allows the spectrum resolution to be improved. In the simulation results, by comparing with the original Capon, the effectiveness of the novel estimator in resolving close peaks is demonstrated using both simulated undamped exponentials and simulated NMR spectroscopy signal (that is damped exponentials).","PeriodicalId":400766,"journal":{"name":"21st European Signal Processing Conference (EUSIPCO 2013)","volume":"36 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-09-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"130939373","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Estimating the distribution of 3D generalized cylinders angles from an image 从图像中估计三维广义柱面角度的分布
Pub Date : 2013-09-09 DOI: 10.5281/ZENODO.43326
Jean-Pierre Da Costa, Stefan Oprean, P. Baylou, C. Germain
The use of 3D imaging techniques is a choice approach for the study of the inner structure of materials. However, for large industrial applications, the stereological analysis of 2D snapshots of material sections is still necessary for obvious time and cost reasons. We present a novel method to analyze the 3D layout of cylindrical structures from a single 2D section. In particular we propose to estimate the distribution of cutting angles i.e. angles between the cylinders axis and the normal to the image plane. Contrary to existing approaches, the knowledge of the cylinder cross section shape is not a prerequisite. The only required input is the statistical distribution of the cylinder cross section area. Our approach is based on the minimization of a least squares criterion under linear constraints. It is evaluated on synthetic data and applied to microscopy images of fibrous composites. Our experimental study focuses on the capabilities and limitations of the approach.
使用三维成像技术是研究材料内部结构的一种选择方法。然而,对于大型工业应用,由于明显的时间和成本原因,仍然需要对材料截面的二维快照进行立体分析。我们提出了一种新的方法来分析圆柱结构的三维布局从一个单一的二维截面。特别是,我们建议估计切割角度的分布,即圆柱体轴与图像平面法线之间的角度。与现有的方法相反,圆柱截面形状的知识不是先决条件。唯一需要的输入是圆柱截面面积的统计分布。我们的方法是基于线性约束下最小二乘准则的最小化。对合成数据进行了评价,并应用于纤维复合材料的显微图像。我们的实验研究侧重于该方法的能力和局限性。
{"title":"Estimating the distribution of 3D generalized cylinders angles from an image","authors":"Jean-Pierre Da Costa, Stefan Oprean, P. Baylou, C. Germain","doi":"10.5281/ZENODO.43326","DOIUrl":"https://doi.org/10.5281/ZENODO.43326","url":null,"abstract":"The use of 3D imaging techniques is a choice approach for the study of the inner structure of materials. However, for large industrial applications, the stereological analysis of 2D snapshots of material sections is still necessary for obvious time and cost reasons. We present a novel method to analyze the 3D layout of cylindrical structures from a single 2D section. In particular we propose to estimate the distribution of cutting angles i.e. angles between the cylinders axis and the normal to the image plane. Contrary to existing approaches, the knowledge of the cylinder cross section shape is not a prerequisite. The only required input is the statistical distribution of the cylinder cross section area. Our approach is based on the minimization of a least squares criterion under linear constraints. It is evaluated on synthetic data and applied to microscopy images of fibrous composites. Our experimental study focuses on the capabilities and limitations of the approach.","PeriodicalId":400766,"journal":{"name":"21st European Signal Processing Conference (EUSIPCO 2013)","volume":"1 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-09-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"130217946","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Energy efficient MIMO transmission with high order modulations for wireless sensor network 无线传感器网络高阶调制的高能效MIMO传输
Pub Date : 2013-09-09 DOI: 10.5281/ZENODO.43614
B. Han, A. Kalis, C. Papadias, R. Prasad
Energy efficiency emerges as a big concern in wireless sensor networks, where the lifetime of the system depends heavily on energy consumption. In a sensor network, the energy is consumed both by the circuit and the radio link. The radio link performance can be improved by using spatial multiplexing, but the conventional way of spatial multiplexing requires large antenna space and consumes more energy. Thus single RF MIMO transmission is proposed, which maps MIMO symbols on the radiation patterns to reduce power consumption. This paper presents the energy efficiency analysis over different schemes, which extends single RF MIMO capability with 16-QAM constellation though compact ESPAR antenna with only 2 elements. A detailed analysis on the minimal required energy is given, which shows that the proposed single RF MIMO with 16-QAM signaling has similar bit error rate performance with better energy efficiency.
在无线传感器网络中,能源效率成为一个大问题,系统的使用寿命在很大程度上取决于能源消耗。在传感器网络中,能量被电路和无线电链路同时消耗。采用空间复用技术可以提高无线电链路的性能,但传统的空间复用方式需要较大的天线空间,且能耗较大。因此,提出了单射频MIMO传输,将MIMO符号映射到辐射方向图上以降低功耗。本文对不同方案进行了能效分析,通过紧凑的2元ESPAR天线扩展了16-QAM星座的单射频MIMO能力。对最小所需能量进行了详细分析,结果表明所提出的16-QAM信令的单射频MIMO具有相似的误码率性能和更好的能量效率。
{"title":"Energy efficient MIMO transmission with high order modulations for wireless sensor network","authors":"B. Han, A. Kalis, C. Papadias, R. Prasad","doi":"10.5281/ZENODO.43614","DOIUrl":"https://doi.org/10.5281/ZENODO.43614","url":null,"abstract":"Energy efficiency emerges as a big concern in wireless sensor networks, where the lifetime of the system depends heavily on energy consumption. In a sensor network, the energy is consumed both by the circuit and the radio link. The radio link performance can be improved by using spatial multiplexing, but the conventional way of spatial multiplexing requires large antenna space and consumes more energy. Thus single RF MIMO transmission is proposed, which maps MIMO symbols on the radiation patterns to reduce power consumption. This paper presents the energy efficiency analysis over different schemes, which extends single RF MIMO capability with 16-QAM constellation though compact ESPAR antenna with only 2 elements. A detailed analysis on the minimal required energy is given, which shows that the proposed single RF MIMO with 16-QAM signaling has similar bit error rate performance with better energy efficiency.","PeriodicalId":400766,"journal":{"name":"21st European Signal Processing Conference (EUSIPCO 2013)","volume":"40 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-09-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"130482144","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Subspace-based spectrum estimation by nuclear norm minimization 基于核范数最小化的子空间频谱估计
Pub Date : 2013-09-09 DOI: 10.5281/ZENODO.43436
H. Akçay, S. Türkay
Subspace-based methods have been effectively used to estimate multi-input/multi-output, linear-time-invariant systems from noisy spectrum samples. In these methods, a critical step is splitting of two invariant subspaces associated with causal and non-causal eigenvalues of some structured matrices built from spectrum measurements via singular-value decomposition in order to determine model order. Mirror image symmetry with respect to the unit circle between the eigenvalue sets of the invariant spaces, required by these algorithms, is lost due to low signal-to-noise ratio, unmodelled dynamics, and insufficient amount of data. Consequently, the choice of model order is not straightforward. In this paper, we propose a robust model order selection scheme based on regularized nuclear norm optimization in combination with a recent subspace algorithm, which uses non-uniformly spaced, in frequencies, spectrum measurements. A simulation example shows the effectiveness of the proposed scheme to large amplitude noise over short data records. Then, the proposed scheme is used to design a linear-shape filter for random road excitations.
基于子空间的方法已被有效地用于从噪声频谱样本中估计多输入/多输出线性时不变系统。在这些方法中,一个关键步骤是通过奇异值分解将一些由频谱测量建立的结构化矩阵的因果特征值和非因果特征值相关联的两个不变子空间分裂,以确定模型顺序。这些算法所要求的相对于不变空间的特征值集之间的单位圆的镜像对称性,由于低信噪比、未建模的动态和数据量不足而丢失。因此,模型顺序的选择不是直截了当的。在本文中,我们提出了一种基于正则化核范数优化的鲁棒模型阶数选择方案,并结合最近的子空间算法,该算法使用非均匀间隔的频率和频谱测量。仿真实例表明了该方法对短数据记录下的大振幅噪声的有效性。然后,利用该方法设计了随机道路激励下的线性滤波器。
{"title":"Subspace-based spectrum estimation by nuclear norm minimization","authors":"H. Akçay, S. Türkay","doi":"10.5281/ZENODO.43436","DOIUrl":"https://doi.org/10.5281/ZENODO.43436","url":null,"abstract":"Subspace-based methods have been effectively used to estimate multi-input/multi-output, linear-time-invariant systems from noisy spectrum samples. In these methods, a critical step is splitting of two invariant subspaces associated with causal and non-causal eigenvalues of some structured matrices built from spectrum measurements via singular-value decomposition in order to determine model order. Mirror image symmetry with respect to the unit circle between the eigenvalue sets of the invariant spaces, required by these algorithms, is lost due to low signal-to-noise ratio, unmodelled dynamics, and insufficient amount of data. Consequently, the choice of model order is not straightforward. In this paper, we propose a robust model order selection scheme based on regularized nuclear norm optimization in combination with a recent subspace algorithm, which uses non-uniformly spaced, in frequencies, spectrum measurements. A simulation example shows the effectiveness of the proposed scheme to large amplitude noise over short data records. Then, the proposed scheme is used to design a linear-shape filter for random road excitations.","PeriodicalId":400766,"journal":{"name":"21st European Signal Processing Conference (EUSIPCO 2013)","volume":"28 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-09-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"127873392","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Online multi-speaker tracking using multiple microphone arrays informed by auditory scene analysis 基于听觉场景分析的多麦克风阵列在线多扬声器跟踪
Pub Date : 2013-09-09 DOI: 10.5281/ZENODO.43511
A. Plinge, G. Fink
Tracking multiple speakers with microphone arrays is used for practical applications such as video conferencing. An important task is the integration of multiple arrays with correct associations of multiple concurrent speakers. A single-array tracking approach based on CASA is extended here to probabilistic tracking with multiple arrays in order to handle a varying number of moving speakers over time and assign the concurrent localizations of multiple sensors to the speakers. Tracking is done simultaneously in angular and Euclidean space. The effectiveness of the method is shown with recordings of real speakers in a reverberant conference room by evaluation on the publicly available AV16.3 corpus.
使用麦克风阵列跟踪多个扬声器用于视频会议等实际应用。一个重要的任务是将多个阵列与多个并发说话者的正确关联进行集成。本文将基于CASA的单阵列跟踪方法扩展到多阵列的概率跟踪,以处理随时间变化的移动扬声器数量,并将多个传感器的并发定位分配给扬声器。在角空间和欧几里得空间中同时进行跟踪。通过对公开可用的AV16.3语料库的评估,在混响会议室中对真实演讲者的录音显示了该方法的有效性。
{"title":"Online multi-speaker tracking using multiple microphone arrays informed by auditory scene analysis","authors":"A. Plinge, G. Fink","doi":"10.5281/ZENODO.43511","DOIUrl":"https://doi.org/10.5281/ZENODO.43511","url":null,"abstract":"Tracking multiple speakers with microphone arrays is used for practical applications such as video conferencing. An important task is the integration of multiple arrays with correct associations of multiple concurrent speakers. A single-array tracking approach based on CASA is extended here to probabilistic tracking with multiple arrays in order to handle a varying number of moving speakers over time and assign the concurrent localizations of multiple sensors to the speakers. Tracking is done simultaneously in angular and Euclidean space. The effectiveness of the method is shown with recordings of real speakers in a reverberant conference room by evaluation on the publicly available AV16.3 corpus.","PeriodicalId":400766,"journal":{"name":"21st European Signal Processing Conference (EUSIPCO 2013)","volume":"112 2 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-09-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"114299103","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 14
Optimal OFDM pulse design, analysis and implementation over doubly dispersive channel 双色散信道OFDM脉冲优化设计、分析与实现
Pub Date : 2013-09-09 DOI: 10.5281/ZENODO.43676
Raouia Ayadi, I. Kammoun, M. Siala
This paper considers optimization and implementation of the pulse shape for Orthogonal Frequency Division Multiplexing (OFDM) systems over doubly dispersive channel. The proposed pulse shape is expressed as a linear combination of the most localized Hermite waveforms. In our previous works, we have proposed pulses optimization based on an exact expression of the Signal to Interference Ratio (SIR). In order to accelerate the optimization procedure, we propose an approximate expression of the SIR using Taylor series of interference and desired signal mean powers. For a performance evaluation of the optimized OFDM system, we propose an efficient implementation of both the modulator and the demodulator of the system and an efficient method to find out the resulting simulated SIR. Simulations results, obtained for different values of the dispersion factor, show that the SIR computed through system level simulation matches the maximum achievable SIR obtained through numerical optimization.
本文研究了正交频分复用(OFDM)系统在双色散信道上脉冲形状的优化与实现。所提出的脉冲形状表示为最局部的埃尔米特波形的线性组合。在我们之前的工作中,我们提出了基于信号干扰比(SIR)的精确表达式的脉冲优化。为了加速优化过程,我们提出了一个使用干扰和期望信号平均功率泰勒级数的SIR近似表达式。为了对优化后的OFDM系统进行性能评估,我们提出了一种有效的系统调制器和解调器的实现方法,并提出了一种有效的方法来找出由此产生的模拟SIR。对于不同色散因子值的仿真结果表明,通过系统级仿真计算的SIR与通过数值优化获得的最大可实现SIR相匹配。
{"title":"Optimal OFDM pulse design, analysis and implementation over doubly dispersive channel","authors":"Raouia Ayadi, I. Kammoun, M. Siala","doi":"10.5281/ZENODO.43676","DOIUrl":"https://doi.org/10.5281/ZENODO.43676","url":null,"abstract":"This paper considers optimization and implementation of the pulse shape for Orthogonal Frequency Division Multiplexing (OFDM) systems over doubly dispersive channel. The proposed pulse shape is expressed as a linear combination of the most localized Hermite waveforms. In our previous works, we have proposed pulses optimization based on an exact expression of the Signal to Interference Ratio (SIR). In order to accelerate the optimization procedure, we propose an approximate expression of the SIR using Taylor series of interference and desired signal mean powers. For a performance evaluation of the optimized OFDM system, we propose an efficient implementation of both the modulator and the demodulator of the system and an efficient method to find out the resulting simulated SIR. Simulations results, obtained for different values of the dispersion factor, show that the SIR computed through system level simulation matches the maximum achievable SIR obtained through numerical optimization.","PeriodicalId":400766,"journal":{"name":"21st European Signal Processing Conference (EUSIPCO 2013)","volume":"6 3 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-09-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"131487009","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Blockmodel module identification in protein interaction networks through Markov random walk 基于马尔可夫随机漫步的蛋白质相互作用网络块模型模块识别
Pub Date : 2013-09-09 DOI: 10.5281/ZENODO.43423
Yijie Wang, Xiaoning Qian
To identify biologically meaningful modules in large-scale biological networks, general blockmodel network clustering algorithms have recently attracted much attention to search for groups of molecules that have similar interaction patterns in networks. However, existing blockmodel module identification algorithms suffer from the problems of prohibitive computational complexity and being trapped at local optima due to its inherent combinatorial complexity. In this paper, we propose a novel blockmodel module identification formulation based on Markov random walk to address those problems by finding high quality approximate solutions. A new convex optimization problem is formulated to find the low conductance (LC) sets as potential modules based on the two-hop transition matrix of Markov random walk on networks. We further propose a spectral approximate algorithm to find high quality modules in large-scale networks. The experimental results on two real-world PPI (protein-protein interaction) networks demonstrate that our method outperforms the state-of-the-art blockmodel module identification algorithms in terms of the accuracy measured by the F-measure based on curated annotations such as GO (Gene Ontology) and KOG (EuKaryotic Orthologous Groups) categories.
为了在大规模生物网络中识别有生物学意义的模块,通用块模型网络聚类算法最近引起了人们的广泛关注,以寻找网络中具有相似相互作用模式的分子群。然而,现有的块模型模块识别算法由于其固有的组合复杂性,存在计算量过大和陷入局部最优的问题。在本文中,我们提出了一种新的基于马尔可夫随机漫步的块模型模块识别公式,通过寻找高质量的近似解来解决这些问题。基于网络上马尔可夫随机行走的两跳转移矩阵,构造了一个寻找低电导集作为电位模块的凸优化问题。我们进一步提出了一种谱近似算法来寻找大规模网络中的高质量模块。在两个真实世界的PPI(蛋白质-蛋白质相互作用)网络上的实验结果表明,我们的方法在基于GO(基因本体)和KOG(真核生物同源群)类别等精选注释的F-measure测量的准确性方面优于最先进的块模型模块识别算法。
{"title":"Blockmodel module identification in protein interaction networks through Markov random walk","authors":"Yijie Wang, Xiaoning Qian","doi":"10.5281/ZENODO.43423","DOIUrl":"https://doi.org/10.5281/ZENODO.43423","url":null,"abstract":"To identify biologically meaningful modules in large-scale biological networks, general blockmodel network clustering algorithms have recently attracted much attention to search for groups of molecules that have similar interaction patterns in networks. However, existing blockmodel module identification algorithms suffer from the problems of prohibitive computational complexity and being trapped at local optima due to its inherent combinatorial complexity. In this paper, we propose a novel blockmodel module identification formulation based on Markov random walk to address those problems by finding high quality approximate solutions. A new convex optimization problem is formulated to find the low conductance (LC) sets as potential modules based on the two-hop transition matrix of Markov random walk on networks. We further propose a spectral approximate algorithm to find high quality modules in large-scale networks. The experimental results on two real-world PPI (protein-protein interaction) networks demonstrate that our method outperforms the state-of-the-art blockmodel module identification algorithms in terms of the accuracy measured by the F-measure based on curated annotations such as GO (Gene Ontology) and KOG (EuKaryotic Orthologous Groups) categories.","PeriodicalId":400766,"journal":{"name":"21st European Signal Processing Conference (EUSIPCO 2013)","volume":"50 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-09-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"134311808","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Segmentation of rib bones from MR data using tracking approach and polynomial parametrization 基于跟踪方法和多项式参数化的MR数据肋骨分割
Pub Date : 2013-09-09 DOI: 10.5281/ZENODO.43439
Harri Pölönen, G. Schubert
Segmentation of rib bones from magnetic resonance (MR) data is a challenging task due to the very weak MR signal of the bone tissue. The locations of the rib bones are indicated by the lack of signal between the surrounding soft tissues. We have developed an automated rib segmentation method, which tracks the bones from a given initial point using a predefined rib cross-section template. The three-dimensional location of the rib midline is parametrized with second order polynomials. The correct rib midline is determined through numerical optimization of polynomial parameters by maximizing cross-correlation between the template and the MR data. The segmentation result is a three-dimensional binary segmentation of the ribs, which can be output also as a surface. Comparison between the method's output and a manual segmentation shows that the method works adequately.
由于骨组织的磁共振信号非常微弱,从磁共振数据中分割肋骨是一项具有挑战性的任务。肋骨的位置是由周围软组织之间缺乏信号来指示的。我们开发了一种自动肋骨分割方法,该方法使用预定义的肋骨横截面模板从给定的初始点跟踪骨骼。肋中线的三维位置用二阶多项式参数化。通过最大化模板与MR数据之间的相互关系,对多项式参数进行数值优化,确定正确的肋中线。分割结果是肋的三维二值分割,也可以作为曲面输出。将该方法的输出与人工分割的结果进行比较,结果表明该方法是有效的。
{"title":"Segmentation of rib bones from MR data using tracking approach and polynomial parametrization","authors":"Harri Pölönen, G. Schubert","doi":"10.5281/ZENODO.43439","DOIUrl":"https://doi.org/10.5281/ZENODO.43439","url":null,"abstract":"Segmentation of rib bones from magnetic resonance (MR) data is a challenging task due to the very weak MR signal of the bone tissue. The locations of the rib bones are indicated by the lack of signal between the surrounding soft tissues. We have developed an automated rib segmentation method, which tracks the bones from a given initial point using a predefined rib cross-section template. The three-dimensional location of the rib midline is parametrized with second order polynomials. The correct rib midline is determined through numerical optimization of polynomial parameters by maximizing cross-correlation between the template and the MR data. The segmentation result is a three-dimensional binary segmentation of the ribs, which can be output also as a surface. Comparison between the method's output and a manual segmentation shows that the method works adequately.","PeriodicalId":400766,"journal":{"name":"21st European Signal Processing Conference (EUSIPCO 2013)","volume":"9 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-09-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"133233910","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
On the influence of inharmonicities in model-based speech enhancement 基于模型的语音增强中不和谐度的影响
Pub Date : 2013-09-09 DOI: 10.5281/ZENODO.43372
S. Nørholm, J. Jensen, M. G. Christensen
In relation to speech enhancement, we study the influence of modifying the harmonic signal model for voiced speech to include small perturbations in the frequencies of the harmonics. A perturbed signal model is incorporated in the nonlinear least squares method, the Capon filter and the amplitude and phase estimation filter. Results show that it is possible to increase the performance, in terms of the signal reduction factor and the output signal-to-noise ratio, at the cost of increased complexity in the estimation of the model parameters. It is found that the perturbed signal model performs better than the harmonic signal model at input signal-to-noise ratios above approximately -10 dB, and that they are equally good below.
在语音增强方面,我们研究了修改浊音的谐波信号模型以包含谐波频率中的小扰动的影响。在非线性最小二乘法、Capon滤波器和幅相估计滤波器中加入了摄动信号模型。结果表明,以增加模型参数估计的复杂性为代价,可以在信号减少因子和输出信噪比方面提高性能。研究发现,在输入信噪比约为-10 dB以上时,摄动信号模型的性能优于谐波信号模型,在输入信噪比低于-10 dB时,两者的性能同样良好。
{"title":"On the influence of inharmonicities in model-based speech enhancement","authors":"S. Nørholm, J. Jensen, M. G. Christensen","doi":"10.5281/ZENODO.43372","DOIUrl":"https://doi.org/10.5281/ZENODO.43372","url":null,"abstract":"In relation to speech enhancement, we study the influence of modifying the harmonic signal model for voiced speech to include small perturbations in the frequencies of the harmonics. A perturbed signal model is incorporated in the nonlinear least squares method, the Capon filter and the amplitude and phase estimation filter. Results show that it is possible to increase the performance, in terms of the signal reduction factor and the output signal-to-noise ratio, at the cost of increased complexity in the estimation of the model parameters. It is found that the perturbed signal model performs better than the harmonic signal model at input signal-to-noise ratios above approximately -10 dB, and that they are equally good below.","PeriodicalId":400766,"journal":{"name":"21st European Signal Processing Conference (EUSIPCO 2013)","volume":"59 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-09-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"133210441","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
期刊
21st European Signal Processing Conference (EUSIPCO 2013)
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1