首页 > 最新文献

arXiv: Applications最新文献

英文 中文
Weekly Bayesian Modelling Strategy to Predict Deaths by COVID-19: a Model and Case Study for the State of Santa Catarina, Brazil 预测COVID-19死亡人数的每周贝叶斯建模策略:巴西圣卡塔琳娜州的模型和案例研究
Pub Date : 2021-04-26 DOI: 10.21203/RS.3.RS-444318/V1
Pedro H. C. Avelar, L. Lamb, S. Tsoka, Jonathan Cardoso-Silva
Background: The novel coronavirus pandemic has affected Brazil's Santa Catarina State (SC) severely. At the time of writing (24 March 2021), over 764,000 cases and over 9,800 deaths by COVID-19 have been confirmed, hospitals were fully occupied with local news reporting at least 397 people in the waiting list for an ICU bed. Despite initial state-wide measures at the outbreak of the pandemic, the state government passed most responsibilities down to cities local government, leaving them to plan whether and when to apply Non-Pharmaceutical Interventions (NPIs). In an attempt to better inform local policy making, we applied an existing Bayesian algorithm to model the spread of the pandemic in the seven geographic macro-regions of the state. However, as we found that the model was too reactive to change in data trends, here we propose changes to extend the model and improve its forecasting capabilities. Methods: Our four proposed variations of the original method allow accessing data of daily reported infections and take into account under-reporting of cases more explicitly. Two of the proposed versions also attempt to model the delay in test reporting. We simulated weekly forecasting of deaths from the period from 31/05/2020 until 31/01/2021.First week data were used as a cold-start to the algorithm, after which weekly calibrations of the model were able to converge in fewer iterations. Google Mobility data were used as covariates to the model, as well as to estimate of the susceptible population at each simulated run. Findings: The changes made the model significantly less reactive and more rapid in adapting to scenarios after a peak in deaths is observed. Assuming that the cases are under-reported greatly benefited the model in its stability, and modelling retroactively-added data (due to the “hot” nature of the data used) had a negligible impact in performance. Interpretation: Although not as reliable as death statistics, case statistics, when modelled in conjunction with an overestimate parameter, provide a good alternative for improving the forecasting of models, especially in long-range predictions and after the peak of an infection wave.
背景:新型冠状病毒大流行严重影响了巴西圣卡塔琳娜州(SC)。在撰写本文时(2021年3月24日),已确诊的COVID-19病例超过76.4万例,死亡人数超过9800人,医院被当地新闻报道占据,至少有397人在等待重症监护室床位。尽管在大流行爆发时全州范围内采取了初步措施,但州政府将大部分责任移交给了城市地方政府,由它们来规划是否以及何时实施非药物干预措施。为了更好地为当地政策制定提供信息,我们应用现有的贝叶斯算法对该州七个地理宏观区域的大流行传播进行了建模。然而,由于我们发现模型对数据趋势的变化过于反应,在这里我们提出了一些变化来扩展模型并提高其预测能力。方法:我们提出的原始方法的四个变体允许访问每日报告感染的数据,并更明确地考虑漏报病例。其中两个提议的版本也试图模拟测试报告中的延迟。我们模拟了从2020年5月31日到2021年1月31日期间的每周死亡预测。第一周的数据被用作算法的冷启动,之后每周的模型校准能够在更少的迭代中收敛。谷歌移动数据被用作模型的协变量,以及在每次模拟运行中估计易感人群。研究结果:在观察到死亡高峰后,这些变化使模型的反应性显著降低,适应情况的速度更快。假设病例报告不足大大有利于模型的稳定性,并且建模追溯添加的数据(由于所使用数据的“热”性质)对性能的影响可以忽略不计。解释:虽然不像死亡统计那样可靠,但病例统计在与高估参数一起建模时,为改进模型的预测提供了一个很好的替代方法,特别是在长期预测和感染波高峰之后。
{"title":"Weekly Bayesian Modelling Strategy to Predict Deaths by COVID-19: a Model and Case Study for the State of Santa Catarina, Brazil","authors":"Pedro H. C. Avelar, L. Lamb, S. Tsoka, Jonathan Cardoso-Silva","doi":"10.21203/RS.3.RS-444318/V1","DOIUrl":"https://doi.org/10.21203/RS.3.RS-444318/V1","url":null,"abstract":"\u0000 Background: The novel coronavirus pandemic has affected Brazil's Santa Catarina State (SC) severely. At the time of writing (24 March 2021), over 764,000 cases and over 9,800 deaths by COVID-19 have been confirmed, hospitals were fully occupied with local news reporting at least 397 people in the waiting list for an ICU bed. Despite initial state-wide measures at the outbreak of the pandemic, the state government passed most responsibilities down to cities local government, leaving them to plan whether and when to apply Non-Pharmaceutical Interventions (NPIs). In an attempt to better inform local policy making, we applied an existing Bayesian algorithm to model the spread of the pandemic in the seven geographic macro-regions of the state. However, as we found that the model was too reactive to change in data trends, here we propose changes to extend the model and improve its forecasting capabilities. Methods: Our four proposed variations of the original method allow accessing data of daily reported infections and take into account under-reporting of cases more explicitly. Two of the proposed versions also attempt to model the delay in test reporting. We simulated weekly forecasting of deaths from the period from 31/05/2020 until 31/01/2021.First week data were used as a cold-start to the algorithm, after which weekly calibrations of the model were able to converge in fewer iterations. Google Mobility data were used as covariates to the model, as well as to estimate of the susceptible population at each simulated run. Findings: The changes made the model significantly less reactive and more rapid in adapting to scenarios after a peak in deaths is observed. Assuming that the cases are under-reported greatly benefited the model in its stability, and modelling retroactively-added data (due to the “hot” nature of the data used) had a negligible impact in performance. Interpretation: Although not as reliable as death statistics, case statistics, when modelled in conjunction with an overestimate parameter, provide a good alternative for improving the forecasting of models, especially in long-range predictions and after the peak of an infection wave.","PeriodicalId":409996,"journal":{"name":"arXiv: Applications","volume":"4 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-04-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"129049175","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Selecting the Most Effective Nudge: Evidence from a Large-Scale Experiment on Immunization 选择最有效的助推:来自大规模免疫实验的证据
Pub Date : 2021-04-19 DOI: 10.3386/W28726
A. Banerjee, Arun G. Chandrasekhar, S. Dalpath, E. Duflo, J. Floretta, M. Jackson, Harini Kannan, F. Loza, Anirudh Sankar, A. Schrimpf, Maheshwor Shrestha
We evaluate a large-scale set of interventions to increase demand for immunization in Haryana, India. The policies under consideration include the two most frequently discussed tools--reminders and incentives--as well as an intervention inspired by the networks literature. We cross-randomize whether (a) individuals receive SMS reminders about upcoming vaccination drives; (b) individuals receive incentives for vaccinating their children; (c) influential individuals (information hubs, trusted individuals, or both) are asked to act as "ambassadors" receiving regular reminders to spread the word about immunization in their community. By taking into account different versions (or "dosages") of each intervention, we obtain 75 unique policy combinations. We develop a new statistical technique--a smart pooling and pruning procedure--for finding a best policy from a large set, which also determines which policies are effective and the effect of the best policy. We proceed in two steps. First, we use a LASSO technique to collapse the data: we pool dosages of the same treatment if the data cannot reject that they had the same impact, and prune policies deemed ineffective. Second, using the remaining (pooled) policies, we estimate the effect of the best policy, accounting for the winner's curse. The key outcomes are (i) the number of measles immunizations and (ii) the number of immunizations per dollar spent. The policy that has the largest impact (information hubs, SMS reminders, incentives that increase with each immunization) increases the number of immunizations by 44% relative to the status quo. The most cost-effective policy (information hubs, SMS reminders, no incentives) increases the number of immunizations per dollar by 9.1%.
我们评估了一套大规模的干预措施,以增加印度哈里亚纳邦的免疫需求。正在考虑的政策包括两种最常讨论的工具——提醒和激励——以及受网络文献启发的干预措施。我们交叉随机选择(a)个人是否收到关于即将到来的疫苗接种活动的短信提醒;(b)为子女接种疫苗的个人获得奖励;(c)请有影响力的个人(信息中心、受信任的个人,或两者兼而有之)担任“大使”,定期收到提醒,在其社区宣传免疫接种。通过考虑每种干预措施的不同版本(或“剂量”),我们得到了75种独特的政策组合。我们开发了一种新的统计技术——智能池和修剪过程——用于从大集合中找到最佳策略,这也决定了哪些策略是有效的以及最佳策略的效果。我们分两步进行。首先,我们使用LASSO技术来分解数据:如果数据无法拒绝它们具有相同的影响,我们将相同处理的剂量集中在一起,并修剪被认为无效的政策。其次,使用剩余的(汇集的)策略,我们估计最佳策略的效果,考虑赢家的诅咒。主要成果是(一)麻疹免疫接种的数量和(二)每一美元的免疫接种数量。影响最大的政策(信息中心、短信提醒、奖励措施随着每次免疫接种的增加而增加)使免疫接种数量相对于现状增加44%。最具成本效益的政策(信息中心、短信提醒、无奖励)使每美元的免疫接种数量增加9.1%。
{"title":"Selecting the Most Effective Nudge: Evidence from a Large-Scale Experiment on Immunization","authors":"A. Banerjee, Arun G. Chandrasekhar, S. Dalpath, E. Duflo, J. Floretta, M. Jackson, Harini Kannan, F. Loza, Anirudh Sankar, A. Schrimpf, Maheshwor Shrestha","doi":"10.3386/W28726","DOIUrl":"https://doi.org/10.3386/W28726","url":null,"abstract":"We evaluate a large-scale set of interventions to increase demand for immunization in Haryana, India. The policies under consideration include the two most frequently discussed tools--reminders and incentives--as well as an intervention inspired by the networks literature. We cross-randomize whether (a) individuals receive SMS reminders about upcoming vaccination drives; (b) individuals receive incentives for vaccinating their children; (c) influential individuals (information hubs, trusted individuals, or both) are asked to act as \"ambassadors\" receiving regular reminders to spread the word about immunization in their community. By taking into account different versions (or \"dosages\") of each intervention, we obtain 75 unique policy combinations. We develop a new statistical technique--a smart pooling and pruning procedure--for finding a best policy from a large set, which also determines which policies are effective and the effect of the best policy. We proceed in two steps. First, we use a LASSO technique to collapse the data: we pool dosages of the same treatment if the data cannot reject that they had the same impact, and prune policies deemed ineffective. Second, using the remaining (pooled) policies, we estimate the effect of the best policy, accounting for the winner's curse. The key outcomes are (i) the number of measles immunizations and (ii) the number of immunizations per dollar spent. The policy that has the largest impact (information hubs, SMS reminders, incentives that increase with each immunization) increases the number of immunizations by 44% relative to the status quo. The most cost-effective policy (information hubs, SMS reminders, no incentives) increases the number of immunizations per dollar by 9.1%.","PeriodicalId":409996,"journal":{"name":"arXiv: Applications","volume":"76 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-04-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"117032198","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 36
Revealing the Transmission Dynamics of COVID-19: A Bayesian Framework for Rt Estimation 揭示COVID-19的传播动态:一个贝叶斯Rt估计框架
Pub Date : 2020-12-22 DOI: 10.21203/RS.3.RS-137557/V1
Xian Yang, Shuo Wang, Yuting Xing, Ling Li, R. Xu, Karl J. Friston, Yike Guo
In epidemiological modelling, the instantaneous reproduction number, Rt, is important to understand the transmission dynamics of infectious diseases. Current Rt estimates often suffer from problems such as lagging, averaging and uncertainties demoting the usefulness of Rt. To address these problems, we propose a new method in the framework of sequential Bayesian inference where a Data Assimilation approach is taken for Rt estimation, resulting in the state-of-the-art ‘DARt’ system for Rt estimation. With DARt, the problem of time misalignment caused by lagging observations is tackled by incorporating observation delays into the joint inference of infections and Rt; the drawback of averaging is improved by instantaneous updating upon new observations and a model selection mechanism capturing abrupt changes caused by interventions; the uncertainty is quantified and reduced by employing Bayesian smoothing. We validate the performance of DARt through simulations and demonstrate its power in revealing the transmission dynamics of COVID-19.
在流行病学建模中,瞬时繁殖数Rt对于理解传染病的传播动力学非常重要。目前的Rt估计经常存在滞后、平均和不确定性等问题,降低了Rt的实用性。为了解决这些问题,我们在顺序贝叶斯推理的框架中提出了一种新方法,其中采用数据同化方法进行Rt估计,从而产生了最先进的Rt估计“DARt”系统。在DARt中,通过将观测延迟纳入感染和Rt的联合推断中,解决了观测滞后导致的时间失调问题;通过对新观测的瞬时更新和捕获干预引起的突变的模型选择机制,改进了平均的缺点;采用贝叶斯平滑对不确定性进行量化和降低。我们通过模拟验证了DARt的性能,并展示了其在揭示COVID-19传播动态方面的能力。
{"title":"Revealing the Transmission Dynamics of COVID-19: A Bayesian Framework for Rt Estimation","authors":"Xian Yang, Shuo Wang, Yuting Xing, Ling Li, R. Xu, Karl J. Friston, Yike Guo","doi":"10.21203/RS.3.RS-137557/V1","DOIUrl":"https://doi.org/10.21203/RS.3.RS-137557/V1","url":null,"abstract":"\u0000 In epidemiological modelling, the instantaneous reproduction number, Rt, is important to understand the transmission dynamics of infectious diseases. Current Rt estimates often suffer from problems such as lagging, averaging and uncertainties demoting the usefulness of Rt. To address these problems, we propose a new method in the framework of sequential Bayesian inference where a Data Assimilation approach is taken for Rt estimation, resulting in the state-of-the-art ‘DARt’ system for Rt estimation. With DARt, the problem of time misalignment caused by lagging observations is tackled by incorporating observation delays into the joint inference of infections and Rt; the drawback of averaging is improved by instantaneous updating upon new observations and a model selection mechanism capturing abrupt changes caused by interventions; the uncertainty is quantified and reduced by employing Bayesian smoothing. We validate the performance of DARt through simulations and demonstrate its power in revealing the transmission dynamics of COVID-19.","PeriodicalId":409996,"journal":{"name":"arXiv: Applications","volume":"26 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2020-12-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"126661403","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Improving living biomass C-stock loss estimates by combining optical satellite, airborne laser scanning, and NFI data 通过结合光学卫星、机载激光扫描和NFI数据改进活生物量c储量损失估算
Pub Date : 2020-12-14 DOI: 10.1139/CJFR-2020-0518
J. Breidenbach, J. Ivanovs, A. Kangas, T. Nord‐Larsen, M. Nilson, R. Astrup
Policy measures and management decisions aiming at enhancing the role of forests in mitigating climate-change require reliable estimates of C-stock dynamics in greenhouse gas inventories (GHGIs). Aim of this study was to assemble design-based estimators to provide estimates relevant for GHGIs using national forest inventory (NFI) data. We improve basic expansion (BE) estimates of living-biomass C-stock loss using field-data only, by leveraging with remotely-sensed auxiliary data in model-assisted (MA) estimates. Our case studies from Norway, Sweden, Denmark, and Latvia covered an area of >70 Mha. Landsat-based Forest Cover Loss (FCL) and one-time wall-to-wall airborne laser scanning (ALS) data served as auxiliary data. ALS provided information on the C-stock before a potential disturbance indicated by FCL. The use of FCL in MA estimators resulted in considerable efficiency gains which in most cases were further increased by using ALS in addition. A doubling of efficiency was possible for national estimates and even larger efficiencies were observed at the sub-national level. Average annual estimates were considerably more precise than pooled estimates using NFI data from all years at once. The combination of remotely-sensed with NFI field data yields reliable estimates which is not necessarily the case when using remotely-sensed data without reference observations.
旨在加强森林在减缓气候变化中的作用的政策措施和管理决策需要对温室气体清单(ghgi)中的碳储量动态进行可靠的估计。本研究的目的是利用国家森林清查(NFI)数据集合基于设计的估算器,以提供与GHGIs相关的估算。通过利用模型辅助(MA)估算中的遥感辅助数据,我们仅使用现场数据改进了对活生物量c储备损失的基本扩展(BE)估算。我们的案例研究来自挪威、瑞典、丹麦和拉脱维亚,覆盖面积超过70公顷。基于陆地卫星的森林覆盖损失(FCL)数据和一次性机载激光扫描(ALS)数据作为辅助数据。在FCL指示的潜在扰动之前,ALS提供了C-stock的信息。在MA估计器中使用FCL导致了相当大的效率提高,在大多数情况下,通过使用ALS进一步提高了效率。国家估计数的效率可能增加一倍,在国家以下一级观察到的效率甚至更高。平均年度估计比一次性使用所有年份的NFI数据进行汇总估计要精确得多。遥感数据与NFI现场数据的结合产生了可靠的估计,而在没有参考观测的情况下使用遥感数据时不一定如此。
{"title":"Improving living biomass C-stock loss estimates by combining optical satellite, airborne laser scanning, and NFI data","authors":"J. Breidenbach, J. Ivanovs, A. Kangas, T. Nord‐Larsen, M. Nilson, R. Astrup","doi":"10.1139/CJFR-2020-0518","DOIUrl":"https://doi.org/10.1139/CJFR-2020-0518","url":null,"abstract":"Policy measures and management decisions aiming at enhancing the role of forests in mitigating climate-change require reliable estimates of C-stock dynamics in greenhouse gas inventories (GHGIs). Aim of this study was to assemble design-based estimators to provide estimates relevant for GHGIs using national forest inventory (NFI) data. We improve basic expansion (BE) estimates of living-biomass C-stock loss using field-data only, by leveraging with remotely-sensed auxiliary data in model-assisted (MA) estimates. Our case studies from Norway, Sweden, Denmark, and Latvia covered an area of >70 Mha. Landsat-based Forest Cover Loss (FCL) and one-time wall-to-wall airborne laser scanning (ALS) data served as auxiliary data. ALS provided information on the C-stock before a potential disturbance indicated by FCL. The use of FCL in MA estimators resulted in considerable efficiency gains which in most cases were further increased by using ALS in addition. A doubling of efficiency was possible for national estimates and even larger efficiencies were observed at the sub-national level. Average annual estimates were considerably more precise than pooled estimates using NFI data from all years at once. The combination of remotely-sensed with NFI field data yields reliable estimates which is not necessarily the case when using remotely-sensed data without reference observations.","PeriodicalId":409996,"journal":{"name":"arXiv: Applications","volume":"46 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2020-12-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"132420686","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 8
Bayesian classification for dating archaeological sites via projectile points. 通过抛射点测定考古遗址年代的贝叶斯分类。
Pub Date : 2020-12-01 DOI: 10.2436/20.8080.02.108
C. Armero, G. Garc'ia-Donato, Joaqu'in Jim'enez-Puerto, Salvador Pardo-Gord'o, J. Bernabeu
Dating is a key element for archaeologists. We propose a Bayesian approach to provide chronology to sites that have neither radiocarbon dating nor clear stratigraphy and whose only information comes from lithic arrowheads. This classifier is based on the Dirichlet-multinomial inferential process and posterior predictive distributions. The procedure is applied to predict the period of a set of undated sites located in the east of the Iberian Peninsula during the IVth and IIIrd millennium cal. BC.
对考古学家来说,年代测定是一个关键因素。我们提出一种贝叶斯方法,为既没有放射性碳定年法,也没有明确的地层学,而且唯一的信息来自石器箭头的遗址提供年代学。该分类器基于dirichlet -多项式推理过程和后验预测分布。该程序被用于预测位于伊比利亚半岛东部的一组未确定日期的遗址在公元前四千年和三千年的时期。
{"title":"Bayesian classification for dating archaeological sites via projectile points.","authors":"C. Armero, G. Garc'ia-Donato, Joaqu'in Jim'enez-Puerto, Salvador Pardo-Gord'o, J. Bernabeu","doi":"10.2436/20.8080.02.108","DOIUrl":"https://doi.org/10.2436/20.8080.02.108","url":null,"abstract":"Dating is a key element for archaeologists. We propose a Bayesian approach to provide chronology to sites that have neither radiocarbon dating nor clear stratigraphy and whose only information comes from lithic arrowheads. This classifier is based on the Dirichlet-multinomial inferential process and posterior predictive distributions. The procedure is applied to predict the period of a set of undated sites located in the east of the Iberian Peninsula during the IVth and IIIrd millennium cal. BC.","PeriodicalId":409996,"journal":{"name":"arXiv: Applications","volume":"99 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2020-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"121809387","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Probabilistic modeling of discrete structural response with application to composite plate penetration models. 离散结构响应的概率建模及其在复合材料板侵彻模型中的应用。
Pub Date : 2020-11-23 DOI: 10.1061/(ASCE)EM.1943-7889.0001996
Anindya Bhaduri, C. Meyer, J. Gillespie, B. Haque, M. Shields, L. Graham‐Brady
Discrete response of structures is often a key probabilistic quantity of interest. For example, one may need to identify the probability of a binary event, such as, whether a structure has buckled or not. In this study, an adaptive domain-based decomposition and classification method, combined with sparse grid sampling, is used to develop an efficient classification surrogate modeling algorithm for such discrete outputs. An assumption of monotonic behaviour of the output with respect to all model parameters, based on the physics of the problem, helps to reduce the number of model evaluations and makes the algorithm more efficient. As an application problem, this paper deals with the development of a computational framework for generation of probabilistic penetration response of S-2 glass/SC-15 epoxy composite plates under ballistic impact. This enables the computationally feasible generation of the probabilistic velocity response (PVR) curve or the $V_0-V_{100}$ curve as a function of the impact velocity, and the ballistic limit velocity prediction as a function of the model parameters. The PVR curve incorporates the variability of the model input parameters and describes the probability of penetration of the plate as a function of impact velocity.
结构的离散响应通常是我们感兴趣的关键概率量。例如,可能需要识别二元事件的概率,例如,结构是否已经屈曲。本研究采用基于自适应域的分解分类方法,结合稀疏网格采样,对此类离散输出开发了一种高效的分类代理建模算法。基于问题的物理性质,假设输出相对于所有模型参数的单调行为,有助于减少模型评估的数量,使算法更有效。作为一个应用问题,本文研究了S-2玻璃/SC-15环氧复合材料板在弹道冲击下概率侵彻响应生成的计算框架。这使得生成概率速度响应(PVR)曲线或作为冲击速度函数的$V_0-V_{100}$曲线以及作为模型参数函数的弹道极限速度预测在计算上可行。PVR曲线包含了模型输入参数的可变性,并将板的穿透概率描述为冲击速度的函数。
{"title":"Probabilistic modeling of discrete structural response with application to composite plate penetration models.","authors":"Anindya Bhaduri, C. Meyer, J. Gillespie, B. Haque, M. Shields, L. Graham‐Brady","doi":"10.1061/(ASCE)EM.1943-7889.0001996","DOIUrl":"https://doi.org/10.1061/(ASCE)EM.1943-7889.0001996","url":null,"abstract":"Discrete response of structures is often a key probabilistic quantity of interest. For example, one may need to identify the probability of a binary event, such as, whether a structure has buckled or not. In this study, an adaptive domain-based decomposition and classification method, combined with sparse grid sampling, is used to develop an efficient classification surrogate modeling algorithm for such discrete outputs. An assumption of monotonic behaviour of the output with respect to all model parameters, based on the physics of the problem, helps to reduce the number of model evaluations and makes the algorithm more efficient. As an application problem, this paper deals with the development of a computational framework for generation of probabilistic penetration response of S-2 glass/SC-15 epoxy composite plates under ballistic impact. This enables the computationally feasible generation of the probabilistic velocity response (PVR) curve or the $V_0-V_{100}$ curve as a function of the impact velocity, and the ballistic limit velocity prediction as a function of the model parameters. The PVR curve incorporates the variability of the model input parameters and describes the probability of penetration of the plate as a function of impact velocity.","PeriodicalId":409996,"journal":{"name":"arXiv: Applications","volume":"1 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2020-11-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"121878185","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 9
Statistical techniques to estimate the SARS-CoV-2 infection fatality rate 估计SARS-CoV-2感染致死率的统计技术
Pub Date : 2020-11-19 DOI: 10.1101/2020.11.19.20235036
M. Mieskolainen, R. Bainbridge, O. Buchmueller, L. Lyons, N. Wardle
The determination of the infection fatality rate (IFR) for the novel SARS-CoV-2 coronavirus is a key aim for many of the field studies that are currently being undertaken in response to the pandemic. The IFR together with the basic reproduction number R0, are the main epidemic parameters describing severity and transmissibility of the virus, respectively. The IFR can be also used as a basis for estimating and monitoring the number of infected individuals in a population, which may be subsequently used to inform policy decisions relating to public health interventions and lockdown strategies. The interpretation of IFR measurements requires the calculation of confidence intervals. We present a number of statistical methods that are relevant in this context and develop an inverse problem formulation to determine correction factors to mitigate time-dependent effects that can lead to biased IFR estimates. We also review a number of methods to combine IFR estimates from multiple independent studies, provide example calculations throughout this note and conclude with a summary and "best practice" recommendations. The developed code is available online.
确定新型SARS-CoV-2冠状病毒的感染致死率(IFR)是目前为应对大流行正在进行的许多实地研究的一个关键目标。IFR和基本繁殖数R0分别是描述病毒严重程度和传播力的主要流行参数。IFR还可作为估计和监测人群中受感染人数的基础,随后可用于为与公共卫生干预措施和封锁战略有关的政策决定提供信息。IFR测量值的解释需要计算置信区间。我们提出了许多与此相关的统计方法,并开发了一个反问题公式来确定校正因子,以减轻可能导致有偏差的IFR估计的时间依赖性影响。我们还审查了一些方法,将多个独立研究的IFR估计结合起来,在本说明中提供示例计算,并以摘要和“最佳实践”建议结束。开发的代码可在网上获得。
{"title":"Statistical techniques to estimate the SARS-CoV-2 infection fatality rate","authors":"M. Mieskolainen, R. Bainbridge, O. Buchmueller, L. Lyons, N. Wardle","doi":"10.1101/2020.11.19.20235036","DOIUrl":"https://doi.org/10.1101/2020.11.19.20235036","url":null,"abstract":"The determination of the infection fatality rate (IFR) for the novel SARS-CoV-2 coronavirus is a key aim for many of the field studies that are currently being undertaken in response to the pandemic. The IFR together with the basic reproduction number R0, are the main epidemic parameters describing severity and transmissibility of the virus, respectively. The IFR can be also used as a basis for estimating and monitoring the number of infected individuals in a population, which may be subsequently used to inform policy decisions relating to public health interventions and lockdown strategies. The interpretation of IFR measurements requires the calculation of confidence intervals. We present a number of statistical methods that are relevant in this context and develop an inverse problem formulation to determine correction factors to mitigate time-dependent effects that can lead to biased IFR estimates. We also review a number of methods to combine IFR estimates from multiple independent studies, provide example calculations throughout this note and conclude with a summary and \"best practice\" recommendations. The developed code is available online.","PeriodicalId":409996,"journal":{"name":"arXiv: Applications","volume":"10 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2020-11-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"130897616","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Prediction and model-assisted estimation of diameter distributions using Norwegian national forest inventory and airborne laser scanning data 利用挪威国家森林清查和机载激光扫描数据对直径分布进行预测和模型辅助估计
Pub Date : 2020-10-14 DOI: 10.1139/CJFR-2020-0440
Janne Raty, R. Astrup, J. Breidenbach
Diameter at breast height (DBH) distributions offer valuable information for operational and strategic forest management decisions. We predicted DBH distributions using Norwegian national forest inventory and airborne laser scanning data in an 8.7 Mha study area and compared the predictive performance of parameter prediction methods using linear-mixed effects (PPM) and generalized linear-mixed models (GLM), and a k nearest neighbor (NN) approach. With PPM and GLM, it was assumed that the data follow a truncated Weibull distribution. While GLM resulted in slightly smaller errors than PPM, both were clearly outperformed by NN. We applied NN to study the variance of model-assisted (MA) estimates of the DBH distribution in the whole study area. The MA estimator yielded greater than or almost equal efficiencies as the direct estimator in the 2 cm DBH classes (6, 8,..., 50 cm) where relative efficiencies (REs) varied in the range of 0.97$-$1.63. RE was largest in the DBH classes $leq$ 10 cm and decreased towards the right tail of the distribution. A forest mask and tree species map introduced further uncertainty beyond the DBH distribution model, which reduced REs to 0.97$-$1.50.
胸径分布为森林经营决策和战略决策提供了有价值的信息。在8.7 Mha的研究区域内,利用挪威国家森林清调查和航空激光扫描数据预测了胸径分布,并比较了线性混合效应(PPM)、广义线性混合模型(GLM)和k最近邻(NN)方法参数预测方法的预测性能。对于PPM和GLM,假设数据遵循截断威布尔分布。虽然GLM产生的误差略小于PPM,但两者都明显优于NN。应用神经网络对整个研究区胸径分布的模型辅助估计方差进行了研究。在2 cm DBH等级(6,8,…)中,MA估计器的效率大于或几乎等于直接估计器。, 50 cm),相对效率(REs)在0.97 $-$ 1.63的范围内变化。RE在DBH类$leq$ 10 cm处最大,向分布的右尾部减小。森林掩膜和树种图在胸径分布模型之外引入了进一步的不确定性,使REs降至0.97 $-$ 1.50。
{"title":"Prediction and model-assisted estimation of diameter distributions using Norwegian national forest inventory and airborne laser scanning data","authors":"Janne Raty, R. Astrup, J. Breidenbach","doi":"10.1139/CJFR-2020-0440","DOIUrl":"https://doi.org/10.1139/CJFR-2020-0440","url":null,"abstract":"Diameter at breast height (DBH) distributions offer valuable information for operational and strategic forest management decisions. We predicted DBH distributions using Norwegian national forest inventory and airborne laser scanning data in an 8.7 Mha study area and compared the predictive performance of parameter prediction methods using linear-mixed effects (PPM) and generalized linear-mixed models (GLM), and a k nearest neighbor (NN) approach. With PPM and GLM, it was assumed that the data follow a truncated Weibull distribution. While GLM resulted in slightly smaller errors than PPM, both were clearly outperformed by NN. We applied NN to study the variance of model-assisted (MA) estimates of the DBH distribution in the whole study area. The MA estimator yielded greater than or almost equal efficiencies as the direct estimator in the 2 cm DBH classes (6, 8,..., 50 cm) where relative efficiencies (REs) varied in the range of 0.97$-$1.63. RE was largest in the DBH classes $leq$ 10 cm and decreased towards the right tail of the distribution. A forest mask and tree species map introduced further uncertainty beyond the DBH distribution model, which reduced REs to 0.97$-$1.50.","PeriodicalId":409996,"journal":{"name":"arXiv: Applications","volume":"10 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2020-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"130496939","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Regional Flood Risk Projections under Climate Change 气候变化下的区域洪水风险预测
Pub Date : 2020-10-10 DOI: 10.1175/JHM-D-20-0238.1
Sanjib Sharma, Michael Gomez, K. Keller, R. Nicholas, A. Mejia
Flood-related risks to people and property are expected to increase in the future due to environmental and demographic changes. It is important to quantify and effectively communicate flood hazards and exposure to inform the design and implementation of flood risk management strategies. Here we develop an integrated modeling framework to assess projected changes in regional riverine flood inundation risks. The framework samples climate model outputs to force a hydrologic model and generate streamflow projections. Together with a statistical and hydraulic model, we use the projected streamflow to map the uncertainty of flood inundation projections for extreme flood events. We implement the framework for rivers across the state of Pennsylvania, United States. Our projections suggest that flood hazards and exposure across Pennsylvania are overall increasing with future climate change. Specific regions, including the main stem Susquehanna River, lower portion of the Allegheny basin and central portion of Delaware River basin, demonstrate higher flood inundation risks. In our analysis, the climate uncertainty dominates the overall uncertainty surrounding the flood inundation projection chain. The combined hydrologic and hydraulic uncertainties can account for as much as 37% of the total uncertainty. We discuss how this framework can provide regional and dynamic flood-risk assessments and help to inform the design of risk-management strategies.
由于环境和人口结构的变化,预计未来与洪水有关的风险将会增加。重要的是量化和有效地沟通洪水的危害和暴露,为洪水风险管理策略的设计和实施提供信息。在这里,我们开发了一个集成的建模框架来评估区域河流洪水淹没风险的预估变化。该框架对气候模型的输出进行采样,以强制建立水文模型并生成流量预测。结合统计和水力模型,我们使用预估的流量来绘制极端洪水事件洪水淹没预估的不确定性。我们为美国宾夕法尼亚州的河流实施了这个框架。我们的预测表明,随着未来的气候变化,宾夕法尼亚州的洪水灾害和暴露程度总体上正在增加。特定区域,包括萨斯奎哈纳河的干流、阿勒格尼盆地的下游和特拉华河流域的中部,显示出更高的洪水淹没风险。在我们的分析中,气候的不确定性在洪水预估链的总体不确定性中占主导地位。水文和水力综合不确定性可占总不确定性的37%。我们将讨论该框架如何提供区域和动态洪水风险评估,并帮助为风险管理策略的设计提供信息。
{"title":"Regional Flood Risk Projections under Climate Change","authors":"Sanjib Sharma, Michael Gomez, K. Keller, R. Nicholas, A. Mejia","doi":"10.1175/JHM-D-20-0238.1","DOIUrl":"https://doi.org/10.1175/JHM-D-20-0238.1","url":null,"abstract":"Flood-related risks to people and property are expected to increase in the future due to environmental and demographic changes. It is important to quantify and effectively communicate flood hazards and exposure to inform the design and implementation of flood risk management strategies. Here we develop an integrated modeling framework to assess projected changes in regional riverine flood inundation risks. The framework samples climate model outputs to force a hydrologic model and generate streamflow projections. Together with a statistical and hydraulic model, we use the projected streamflow to map the uncertainty of flood inundation projections for extreme flood events. We implement the framework for rivers across the state of Pennsylvania, United States. Our projections suggest that flood hazards and exposure across Pennsylvania are overall increasing with future climate change. Specific regions, including the main stem Susquehanna River, lower portion of the Allegheny basin and central portion of Delaware River basin, demonstrate higher flood inundation risks. In our analysis, the climate uncertainty dominates the overall uncertainty surrounding the flood inundation projection chain. The combined hydrologic and hydraulic uncertainties can account for as much as 37% of the total uncertainty. We discuss how this framework can provide regional and dynamic flood-risk assessments and help to inform the design of risk-management strategies.","PeriodicalId":409996,"journal":{"name":"arXiv: Applications","volume":"1 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2020-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"129082883","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 11
Flattening the COVID-19 Curve: The “Greek” case in the Global Pandemic COVID-19曲线趋平:全球大流行中的“希腊”案例
Pub Date : 2020-10-09 DOI: 10.21203/rs.3.rs-96544/v1
Konstantinos Demertzis, L. Magafas, D. Tsiotas
The global crisis caused by the COVID-19 pandemic, in conjunction with the economic consequences and the collapse of health systems, has raised serious concerns in Europe, which is the most affected continent by the pandemic since it recorded 2,388,694 cases and 190,091 deaths (39.6% of the worldwide total), of which 71.7% (136,238) are in the United Kingdom (43,414), Italy (34,708), France (29,778), and Spain (28,338). Unlike other countries, Greece, with about 310 confirmed cases and 18 deaths per million, is one bright exception in the study and analysis of this phenomenon. Focusing on the peculiarities of the disease spreading in Greece, both in epidemiological and in implementation terms, this paper applies an exploratory analysis of COVID-19 temporal spread in Greece and proposes a methodological approach for the modelling and prediction of the disease based on the Regression Splines algorithm and the change rate of the total infections. Also, it proposes a hybrid spline regression and complex network model of social distance measures evaluating and interpreting the spread of the disease. The overall approach contributes to decision making and support of the public health system and to the fight against the pandemic.
2019冠状病毒病大流行引发的全球危机,加上经济后果和卫生系统崩溃,引起了欧洲的严重关切。欧洲是受疫情影响最严重的大陆,共记录了2388694例病例和190,091例死亡(占全球总数的39.6%),其中71.7%(136,238例)发生在英国(43,414例)、意大利(34708例)、法国(29,778例)和西班牙(28,338例)。与其他国家不同,在对这一现象的研究和分析中,希腊是一个明显的例外,确诊病例约为310例,每百万人中有18人死亡。针对希腊新冠肺炎疫情在流行病学和实施方面的特点,对希腊新冠肺炎疫情的时间传播进行了探索性分析,提出了基于回归样条算法和总感染变化率的疾病建模和预测方法。此外,本文还提出了一种混合样条回归和社会距离测量的复杂网络模型,以评估和解释疾病的传播。整体方法有助于公共卫生系统的决策和支持,并有助于抗击大流行。
{"title":"Flattening the COVID-19 Curve: The “Greek” case in the Global Pandemic","authors":"Konstantinos Demertzis, L. Magafas, D. Tsiotas","doi":"10.21203/rs.3.rs-96544/v1","DOIUrl":"https://doi.org/10.21203/rs.3.rs-96544/v1","url":null,"abstract":"\u0000 The global crisis caused by the COVID-19 pandemic, in conjunction with the economic consequences and the collapse of health systems, has raised serious concerns in Europe, which is the most affected continent by the pandemic since it recorded 2,388,694 cases and 190,091 deaths (39.6% of the worldwide total), of which 71.7% (136,238) are in the United Kingdom (43,414), Italy (34,708), France (29,778), and Spain (28,338). Unlike other countries, Greece, with about 310 confirmed cases and 18 deaths per million, is one bright exception in the study and analysis of this phenomenon. Focusing on the peculiarities of the disease spreading in Greece, both in epidemiological and in implementation terms, this paper applies an exploratory analysis of COVID-19 temporal spread in Greece and proposes a methodological approach for the modelling and prediction of the disease based on the Regression Splines algorithm and the change rate of the total infections. Also, it proposes a hybrid spline regression and complex network model of social distance measures evaluating and interpreting the spread of the disease. The overall approach contributes to decision making and support of the public health system and to the fight against the pandemic.","PeriodicalId":409996,"journal":{"name":"arXiv: Applications","volume":"57 2 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2020-10-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"126129913","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
期刊
arXiv: Applications
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1