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Aculeapyridones A-Q, Pyranopyridone Alkaloids with Protective Effects against Acetaminophen-Induced Acute Liver Injury Discovered from a Coculture of Aspergillus aculeatinus WHUF0198 and a Penicillium sp.
IF 3.3 2区 生物学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2025-01-28 DOI: 10.1021/acs.jnatprod.4c0104910.1021/acs.jnatprod.4c01049
Wei-Chen Chen, Xin Song, Jun Wu, Yu-Ting Zhong, Philomina Panin Edjah, Qin-Yong Zhang, Mu Li, Kong-Kai Zhu, Congkui Tian, Rui-Ying Yuan, Xiao-Yan Wu, Ping Gao, Kui Hong*, Meng-Ke Zhang*, Jie Ping* and You-Sheng Cai*, 

In the search for novel natural products with hepatoprotective effects against acetaminophen-induced acute liver injury, the marine-derived fungus Aspergillus aculeatinus WHUF0198 was investigated. Seventeen undescribed pyranopyridone alkaloids, aculeapyridones A–Q (117), were isolated by bioactivity-guided fractionation of an extract obtained by coculture of the A. aculeatinus WHUF0198 with the mangrove-associated fungus Penicillium sp. DM27. Notably, compounds 1215, which possessed a unique N-methoxy group, were identified as activation products of fungal coculture in liquid media. The structures and absolute configurations of these compounds were elucidated using a combination of universal spectroscopic techniques (NMR and HR-ESI-MS), ECD calculations, and single crystal X-ray diffraction analysis. All the isolated compounds, except 8 and 17, were evaluated for their hepatoprotective activity against acetaminophen-induced acute liver injury in vitro. Compounds 17, 9, 10 and 1215 increased cell viability and reduced alanine aminotransferase (ALT) levels of acetaminophen-induced murine hepatocytes at either 5 or 10 μM.

{"title":"Aculeapyridones A-Q, Pyranopyridone Alkaloids with Protective Effects against Acetaminophen-Induced Acute Liver Injury Discovered from a Coculture of Aspergillus aculeatinus WHUF0198 and a Penicillium sp.","authors":"Wei-Chen Chen,&nbsp;Xin Song,&nbsp;Jun Wu,&nbsp;Yu-Ting Zhong,&nbsp;Philomina Panin Edjah,&nbsp;Qin-Yong Zhang,&nbsp;Mu Li,&nbsp;Kong-Kai Zhu,&nbsp;Congkui Tian,&nbsp;Rui-Ying Yuan,&nbsp;Xiao-Yan Wu,&nbsp;Ping Gao,&nbsp;Kui Hong*,&nbsp;Meng-Ke Zhang*,&nbsp;Jie Ping* and You-Sheng Cai*,&nbsp;","doi":"10.1021/acs.jnatprod.4c0104910.1021/acs.jnatprod.4c01049","DOIUrl":"https://doi.org/10.1021/acs.jnatprod.4c01049https://doi.org/10.1021/acs.jnatprod.4c01049","url":null,"abstract":"<p >In the search for novel natural products with hepatoprotective effects against acetaminophen-induced acute liver injury, the marine-derived fungus <i>Aspergillus aculeatinus</i> WHUF0198 was investigated. Seventeen undescribed pyranopyridone alkaloids, aculeapyridones A–Q (<b>1</b>–<b>17</b>), were isolated by bioactivity-guided fractionation of an extract obtained by coculture of the <i>A. aculeatinus</i> WHUF0198 with the mangrove-associated fungus <i>Penicillium</i> sp. DM27. Notably, compounds <b>12</b>–<b>15</b>, which possessed a unique <i>N</i>-methoxy group, were identified as activation products of fungal coculture in liquid media. The structures and absolute configurations of these compounds were elucidated using a combination of universal spectroscopic techniques (NMR and HR-ESI-MS), ECD calculations, and single crystal X-ray diffraction analysis. All the isolated compounds, except <b>8</b> and <b>17</b>, were evaluated for their hepatoprotective activity against acetaminophen-induced acute liver injury <i>in vitro</i>. Compounds <b>1</b>–<b>7</b>, <b>9</b>, <b>10</b> and <b>12</b>–<b>15</b> increased cell viability and reduced alanine aminotransferase (ALT) levels of acetaminophen-induced murine hepatocytes at either 5 or 10 μM.</p>","PeriodicalId":47,"journal":{"name":"Journal of Natural Products ","volume":"88 2","pages":"336–348 336–348"},"PeriodicalIF":3.3,"publicationDate":"2025-01-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143507741","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Dihydroaurones and Isoflavan Derivatives from the Roots of Glycyrrhiza asymmetrica
IF 3.3 2区 生物学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2025-01-28 DOI: 10.1021/acs.jnatprod.4c0087810.1021/acs.jnatprod.4c00878
Dicle Çevik*, Milena Masullo*, Gianluigi Lauro, Assunta Napolitano, Stefania Martucciello, Gaetana Paolella, Luciana Maria Polcaro, Giuseppe Bifulco, Hasan Kırmızıbekmez and Sonia Piacente, 

As a continuation of our pharmacognostic studies on different Glycyrrhiza species growing in Türkiye, the phytochemical investigation of the roots of Glycyrrhiza asymmetrica Hub.-Mor., a licorice species endemic to Türkiye, was carried out. This study yielded twenty-three secondary metabolites (123) including nine previously unreported compounds: two dihydroaurone-3-enoic acids, licoaurone A (1) and licoaurone B (2), isoflavan hydroxypreglabridin (3), isoflavanone cyclodeoxykievitone (4), flavanone-3-ol glycyasymmetrol (5), and four bi-isoflavans, glycyasymmetrica A–D (69). The structures of isolated compounds were established by NMR and MS experiments. The relative configurations (69) were assigned by a combined quantum mechanical/NMR approach, comparing the experimental 13C/1H NMR chemical shift data and the related predicted values. The absolute configurations of compounds 19 were assigned by comparison of their experimental electronic circular dichroism curves with the TDDFT-predicted curves. All isolated compounds were also evaluated for their cytotoxic activity against MCF-7, HeLa, HepG2, and A549 cancer cell lines by using MTT assay.

{"title":"Dihydroaurones and Isoflavan Derivatives from the Roots of Glycyrrhiza asymmetrica","authors":"Dicle Çevik*,&nbsp;Milena Masullo*,&nbsp;Gianluigi Lauro,&nbsp;Assunta Napolitano,&nbsp;Stefania Martucciello,&nbsp;Gaetana Paolella,&nbsp;Luciana Maria Polcaro,&nbsp;Giuseppe Bifulco,&nbsp;Hasan Kırmızıbekmez and Sonia Piacente,&nbsp;","doi":"10.1021/acs.jnatprod.4c0087810.1021/acs.jnatprod.4c00878","DOIUrl":"https://doi.org/10.1021/acs.jnatprod.4c00878https://doi.org/10.1021/acs.jnatprod.4c00878","url":null,"abstract":"<p >As a continuation of our pharmacognostic studies on different <i>Glycyrrhiza</i> species growing in Türkiye, the phytochemical investigation of the roots of <i>Glycyrrhiza asymmetrica</i> Hub.-Mor., a licorice species endemic to Türkiye, was carried out. This study yielded twenty-three secondary metabolites (<b>1</b>–<b>23</b>) including nine previously unreported compounds: two dihydroaurone-3-enoic acids, licoaurone A (<b>1</b>) and licoaurone B (<b>2</b>), isoflavan hydroxypreglabridin (<b>3</b>), isoflavanone cyclodeoxykievitone (<b>4</b>), flavanone-3-ol glycyasymmetrol (<b>5</b>), and four bi-isoflavans, glycyasymmetrica A–D (<b>6</b>–<b>9</b>). The structures of isolated compounds were established by NMR and MS experiments. The relative configurations (<b>6</b>–<b>9</b>) were assigned by a combined quantum mechanical/NMR approach, comparing the experimental <sup>13</sup>C/<sup>1</sup>H NMR chemical shift data and the related predicted values. The absolute configurations of compounds <b>1</b>–<b>9</b> were assigned by comparison of their experimental electronic circular dichroism curves with the TDDFT-predicted curves. All isolated compounds were also evaluated for their cytotoxic activity against MCF-7, HeLa, HepG2, and A549 cancer cell lines by using MTT assay.</p>","PeriodicalId":47,"journal":{"name":"Journal of Natural Products ","volume":"88 2","pages":"294–305 294–305"},"PeriodicalIF":3.3,"publicationDate":"2025-01-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143507740","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Serinophospholipids: A Third Type of Natural Phospholipid Discovered in a Thermophilic Bacterium
IF 3.3 2区 生物学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2025-01-28 DOI: 10.1021/acs.jnatprod.4c0114110.1021/acs.jnatprod.4c01141
Mikhail Vyssotski*, Kirill Lagutin, Andrew MacKenzie, Kevin Mitchell, Arran W. Stewart, Dawn Scott, Matthew B. Stott and Benjamin J. Compton*, 

Phospholipids are an essential constituent of cells with all life thought to produce these compounds with either a glycerol or sphingoid moiety at their core. For the first time, we demonstrate that a thermophilic bacterium, Limisphaera ngatamarikiensis NGM72.4T, produces a third type of phospholipid, serinophospholipids, which are distinct from glycero- and sphingophospholipids by featuring a serinol backbone instead. We show that the major serinophospholipid metabolites are N,O-diacylserinophospho-N-methylethanolamine and N,O-diacylserinophosphoethanolamine, and that serinophospholipids constitute up to 38% of the phospholipid mass. Furthermore, we demonstrate that these metabolites are further differentiated from “traditional” bacterial glycerophospholipids by their backbone configuration. In contrast to bacterial glycerophospholipids, which have an sn-glycerol-3-phosphate (G3P) architecture, the newly discovered serinophospholipids have an (S)-configured serinol core that is equivalent to the sn-glycerol-1-phosphate (G1P) arrangement characteristic of Archaea.

{"title":"Serinophospholipids: A Third Type of Natural Phospholipid Discovered in a Thermophilic Bacterium","authors":"Mikhail Vyssotski*,&nbsp;Kirill Lagutin,&nbsp;Andrew MacKenzie,&nbsp;Kevin Mitchell,&nbsp;Arran W. Stewart,&nbsp;Dawn Scott,&nbsp;Matthew B. Stott and Benjamin J. Compton*,&nbsp;","doi":"10.1021/acs.jnatprod.4c0114110.1021/acs.jnatprod.4c01141","DOIUrl":"https://doi.org/10.1021/acs.jnatprod.4c01141https://doi.org/10.1021/acs.jnatprod.4c01141","url":null,"abstract":"<p >Phospholipids are an essential constituent of cells with all life thought to produce these compounds with either a glycerol or sphingoid moiety at their core. For the first time, we demonstrate that a thermophilic bacterium, <i>Limisphaera ngatamarikiensis</i> NGM72.4<sup>T</sup>, produces a third type of phospholipid, serinophospholipids, which are distinct from glycero- and sphingophospholipids by featuring a serinol backbone instead. We show that the major serinophospholipid metabolites are <i>N</i>,<i>O</i>-diacylserinophospho-<i>N</i>-methylethanolamine and <i>N</i>,<i>O</i>-diacylserinophosphoethanolamine, and that serinophospholipids constitute up to 38% of the phospholipid mass. Furthermore, we demonstrate that these metabolites are further differentiated from “traditional” bacterial glycerophospholipids by their backbone configuration. In contrast to bacterial glycerophospholipids, which have an <i>sn</i>-glycerol-3-phosphate (G3P) architecture, the newly discovered serinophospholipids have an (<i>S</i>)-configured serinol core that is equivalent to the <i>sn-</i>glycerol-1-phosphate (G1P) arrangement characteristic of Archaea.</p>","PeriodicalId":47,"journal":{"name":"Journal of Natural Products ","volume":"88 2","pages":"373–383 373–383"},"PeriodicalIF":3.3,"publicationDate":"2025-01-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143507779","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Aurovertins from a Marine-Derived Penicillium Species and Nonenzymatic Reactions in Their Formation
IF 3.3 2区 生物学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2025-01-25 DOI: 10.1021/acs.jnatprod.4c0143610.1021/acs.jnatprod.4c01436
Shan Cheng, Yanchao Xu, Meng Kang, Weiming Zhu, Liping Wang* and Peng Fu*, 

Six new aurovertins (16) and a new citreoviridin derivative (7), together with six known analogues (813), were isolated from the marine-derived Penicillium sp. OUCMDZ-5930. Their structures were determined based on detailed spectroscopic analysis and ECD calculations. The putative nonenzymatic formation from citreoviridin to various aurovertins was presented, which was confirmed by chemical transformations. These results provide new insights into the formation mechanism of the 2,6-dioxabicyclo[3.2.1]octane ring system present in aurovertin-type natural products.

{"title":"Aurovertins from a Marine-Derived Penicillium Species and Nonenzymatic Reactions in Their Formation","authors":"Shan Cheng,&nbsp;Yanchao Xu,&nbsp;Meng Kang,&nbsp;Weiming Zhu,&nbsp;Liping Wang* and Peng Fu*,&nbsp;","doi":"10.1021/acs.jnatprod.4c0143610.1021/acs.jnatprod.4c01436","DOIUrl":"https://doi.org/10.1021/acs.jnatprod.4c01436https://doi.org/10.1021/acs.jnatprod.4c01436","url":null,"abstract":"<p >Six new aurovertins (<b>1</b>–<b>6</b>) and a new citreoviridin derivative (<b>7</b>), together with six known analogues (<b>8</b>–<b>13</b>), were isolated from the marine-derived <i>Penicillium</i> sp. OUCMDZ-5930. Their structures were determined based on detailed spectroscopic analysis and ECD calculations. The putative nonenzymatic formation from citreoviridin to various aurovertins was presented, which was confirmed by chemical transformations. These results provide new insights into the formation mechanism of the 2,6-dioxabicyclo[3.2.1]octane ring system present in aurovertin-type natural products.</p>","PeriodicalId":47,"journal":{"name":"Journal of Natural Products ","volume":"88 2","pages":"554–562 554–562"},"PeriodicalIF":3.3,"publicationDate":"2025-01-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143507650","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Editorial for the Special Issue in Honor of Sheo Singh.
IF 3.3 2区 生物学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2025-01-24 DOI: 10.1021/acs.jnatprod.4c01403
Gerald Bills, Gordon M Cragg, Olga Genilloud, David J Newman, Gino M Salituro
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引用次数: 0
Preparation, Modification, Quantitation, and Dentin Biomodification Activity of Selectively Enriched Proanthocyanidins. 选择性富集原花青素的制备、修饰、定量和牙本质生物修饰活性。
IF 3.3 2区 生物学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2025-01-24 Epub Date: 2025-01-13 DOI: 10.1021/acs.jnatprod.4c01213
Shu-Xi Jing, José Guilherme Neves, Walleska Liberato, Daneel Ferreira, Ana K Bedran-Russo, James B McAlpine, Shao-Nong Chen, Guido F Pauli

To date, quantitative analysis of proanthocyanidin (PAC) containing materials including plant extracts and fractions depends on colorimetric assays or phloroglucinolysis/thiolysis combined with UV-HPLC analysis. Such assays are of limited accuracy, particularly lack specificity, require extensive sample preparation and degradation, and need appropriate physical reference standards. To address this analytical challenge and toward our broader goal of developing new plant-sourced biomaterials that chemically and mechanically modulate the properties of dental tissue for clinical interventions, we have characterized 12 different PAC DESIGNER (Depletion and Enrichment of Select Ingredients Generating Normalized Extract Resources) materials. The DESIGNER approach is carried out by using either centrifugal partition chromatography (CPC) or size-exclusion chromatography (SEC) for the selective enrichment of trimeric and tetrameric PACs. Moreover, the rare but biologically interesting A-type PAC DESIGNERs can now be generated successfully from their natural AB-type PAC precursors via phenol-oxidative intramolecular coupling initiated by a mixture of the stable radicals, 2,2-diphenyl-1-picrylhydrazyl (DPPH) and 2,2,6,6-tetramethylpiperidine-1-oxyl (TEMPO). Furthermore, to ensure the quality and stability of PAC DESIGNER materials, we developed a quantitative analysis of the total PAC content of the DESIGNER materials in the form of a quantitative NMR (qNMR) method using a non-PAC internal calibrant combined with diol-HPLC. The total PAC content was, thus, determined to be in a range of 67.5-96.9% by qNMR. We highlight the complementarity of diol-HPLC and qNMR to accurately assess the amount of PACs across a range of concentrations and PAC stability in the DESIGNER materials. This quantitative methodology paves the way to generate standardized DESIGNER and other PAC-containing materials and to perform rigorous quality control for dental (pre)clinical studies of PACs.

迄今为止,含有植物提取物和组分的原花青素(PAC)的定量分析依赖于比色法或间苯三酚解/硫解结合UV-HPLC分析。这种检测方法的准确性有限,特别是缺乏特异性,需要大量的样品制备和降解,并且需要适当的物理参考标准。为了解决这一分析挑战,并朝着我们开发新的植物源生物材料的更广泛目标,这些生物材料可以化学和机械地调节临床干预牙齿组织的特性,我们对12种不同的PAC DESIGNER(消耗和富集选择成分产生标准化提取资源)材料进行了表征。DESIGNER方法采用离心分配色谱法(CPC)或粒径排除色谱法(SEC)选择性富集三聚体和四聚体PACs。此外,通过稳定自由基2,2-二苯基-1-picrylhydrazyl (DPPH)和2,2,6,6-四甲基哌啶-1-oxyl (TEMPO)的混合物引发的苯酚-氧化分子内偶联,现在可以成功地从天然ab型PAC前体中生成罕见但生物学上有趣的a型PAC设计器。此外,为了确保PAC DESIGNER材料的质量和稳定性,我们开发了一种定量核磁共振(qNMR)方法,使用非PAC内校准剂结合二醇-高效液相色谱对DESIGNER材料的PAC总含量进行定量分析。因此,通过qNMR测定总PAC含量在67.5-96.9%之间。我们强调了二醇- hplc和qNMR的互补性,以准确评估PAC在一定浓度范围内的数量和PAC在DESIGNER材料中的稳定性。这种定量方法为生成标准化的DESIGNER和其他含有pac的材料铺平了道路,并为pac的牙科(前)临床研究执行严格的质量控制。
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引用次数: 0
Semisynthesis of Nocarterphenyl A and Its Analogues. 诺卡特苯A及其类似物的半合成。
IF 3.3 2区 生物学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2025-01-24 Epub Date: 2024-12-27 DOI: 10.1021/acs.jnatprod.4c01198
Yong Wang, Yanchao Xu, Dan Wu, Dongyang Wang, Peng Fu, Weiming Zhu, Liping Wang

p-Terphenyl compounds are known to possess a diverse range of biological activities, making the synthesis of novel p-terphenyl derivatives a significant research objective. In this study, we report the first synthesis of nocarterphenyl A (1), characterized by a thiazole-fused p-terphenyl framework. Furthermore, we synthesized 18 additional analogs, including the naturally occurring compound 5-methoxy-4,7-bis(4-methoxyphenyl)benzo[d]thiazol-6-ol (9), employing a similar synthetic approach. Notably, compounds 12, 13, 15-17, and 19 demonstrated potent inhibitory effects against protein tyrosine phosphatase 1B (PTP1B), exhibiting IC50 values ranging from 2.2 to 7.9 μM, which are lower than that of oleanolic acid (13.2 μM). Additionally, compound 14 was found to inhibit α-glucosidase from human colorectal adenocarcinoma (Caco-2) cells with an IC50 value of 10.4 μM, which is also lower than that of acarbose (11.2 μM).

众所周知,对terphenyl化合物具有多种生物活性,因此合成新的对terphenyl衍生物是一个重要的研究目标。在这项研究中,我们报道了第一次合成nocarterphenyl A(1),其特征是一个噻唑-融合对terphenyl框架。此外,我们还合成了另外18个类似物,包括天然化合物5-甲氧基-4,7-双(4-甲氧基苯基)苯并[d]噻唑-6-醇(9),采用类似的合成方法。其中化合物12、13、15 ~ 17和19对蛋白酪氨酸磷酸酶1B (PTP1B)具有较强的抑制作用,IC50值在2.2 ~ 7.9 μM之间,低于齐齐果酸的IC50值(13.2 μM)。此外,化合物14对人结直肠癌(Caco-2)细胞α-葡萄糖苷酶有抑制作用,IC50值为10.4 μM,也低于阿卡波糖(11.2 μM)。
{"title":"Semisynthesis of Nocarterphenyl A and Its Analogues.","authors":"Yong Wang, Yanchao Xu, Dan Wu, Dongyang Wang, Peng Fu, Weiming Zhu, Liping Wang","doi":"10.1021/acs.jnatprod.4c01198","DOIUrl":"10.1021/acs.jnatprod.4c01198","url":null,"abstract":"<p><p><i>p</i>-Terphenyl compounds are known to possess a diverse range of biological activities, making the synthesis of novel <i>p</i>-terphenyl derivatives a significant research objective. In this study, we report the first synthesis of nocarterphenyl A (<b>1</b>), characterized by a thiazole-fused <i>p</i>-terphenyl framework. Furthermore, we synthesized 18 additional analogs, including the naturally occurring compound 5-methoxy-4,7-bis(4-methoxyphenyl)benzo[<i>d</i>]thiazol-6-ol (<b>9</b>), employing a similar synthetic approach. Notably, compounds <b>12</b>, <b>13</b>, <b>15</b>-<b>17</b>, and <b>19</b> demonstrated potent inhibitory effects against protein tyrosine phosphatase 1B (PTP1B), exhibiting IC<sub>50</sub> values ranging from 2.2 to 7.9 μM, which are lower than that of oleanolic acid (13.2 μM). Additionally, compound <b>14</b> was found to inhibit α-glucosidase from human colorectal adenocarcinoma (Caco-2) cells with an IC<sub>50</sub> value of 10.4 μM, which is also lower than that of acarbose (11.2 μM).</p>","PeriodicalId":47,"journal":{"name":"Journal of Natural Products ","volume":" ","pages":"133-140"},"PeriodicalIF":3.3,"publicationDate":"2025-01-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142890682","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Pyridoxal 5'-Phosphate (PLP)-Dependent β- and γ-Substitution Reactions Forming Nonproteinogenic Amino Acids in Natural Product Biosynthesis. 吡哆醛5'-磷酸(PLP)依赖性β-和γ-取代反应在天然产物生物合成中形成非蛋白氨基酸。
IF 3.3 2区 生物学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2025-01-24 Epub Date: 2024-12-19 DOI: 10.1021/acs.jnatprod.4c01226
Taku Mizutani, Ikuro Abe

Living organisms synthesize various nonproteinogenic amino acids (NPAAs) as the building blocks of natural products. These NPAAs are often biosynthesized by pyridoxal 5'-phosphate (PLP)-dependent enzymes, which catalyze β- or γ- substitutions. These enzymes contribute to the structural diversification of NPAAs by installing new functional groups to amino acid side chains. Recent developments in genome mining have led to the identification of various PLP-dependent enzymes catalyzing β- or γ- substitutions, which form NPAAs in secondary metabolism. This short review summarizes recently investigated PLP-enzymes catalyzing β- or γ-substitutions in the biosynthesis of NPAAs by covering the literature published from 2015 through 2024.

生物体合成各种非蛋白源氨基酸(NPAAs),作为天然产物的组成成分。这些非蛋白源氨基酸通常由依赖吡哆醛-5'-磷酸(PLP)的酶进行生物合成,这些酶催化β-或γ-取代。这些酶通过在氨基酸侧链上添加新的功能基团,促进了 NPAAs 结构的多样化。基因组挖掘方面的最新进展导致鉴定出了各种依赖 PLP 的酶,这些酶催化 β- 或 γ- 取代,在次级代谢中形成 NPAAs。本短文综述通过对 2015 年至 2024 年发表的文献进行梳理,总结了最近研究的催化 β- 或 γ- 取代的 PLP 酶在 NPAAs 生物合成中的作用。
{"title":"Pyridoxal 5'-Phosphate (PLP)-Dependent β- and γ-Substitution Reactions Forming Nonproteinogenic Amino Acids in Natural Product Biosynthesis.","authors":"Taku Mizutani, Ikuro Abe","doi":"10.1021/acs.jnatprod.4c01226","DOIUrl":"10.1021/acs.jnatprod.4c01226","url":null,"abstract":"<p><p>Living organisms synthesize various nonproteinogenic amino acids (NPAAs) as the building blocks of natural products. These NPAAs are often biosynthesized by pyridoxal 5'-phosphate (PLP)-dependent enzymes, which catalyze β- or γ- substitutions. These enzymes contribute to the structural diversification of NPAAs by installing new functional groups to amino acid side chains. Recent developments in genome mining have led to the identification of various PLP-dependent enzymes catalyzing β- or γ- substitutions, which form NPAAs in secondary metabolism. This short review summarizes recently investigated PLP-enzymes catalyzing β- or γ-substitutions in the biosynthesis of NPAAs by covering the literature published from 2015 through 2024.</p>","PeriodicalId":47,"journal":{"name":"Journal of Natural Products ","volume":" ","pages":"211-230"},"PeriodicalIF":3.3,"publicationDate":"2025-01-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142862529","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Semi-Synthesis of Dimeric Cannabidiol Derivatives and Evaluation of their Affinity at Neurological Targets
IF 3.3 2区 生物学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2025-01-24 DOI: 10.1021/acs.jnatprod.4c0117410.1021/acs.jnatprod.4c01174
Zachary Stryker, Jorge I. Castillo-Arellano, Stephen J. Cutler, Michael D. Wyatt and Francisco León*, 

Cannabidiol (CBD) is a natural product associated with a wide range of biological and therapeutic activities. Despite the widespread cultural acceptance of CBD as a medicinal agent, much remains to be determined regarding its precise mechanism(s) of action in treating multiple conditions. CBD has been shown to promiscuously interact with several neurological targets with varying affinities. To expand the chemical space of phytocannabinoids and develop novel chemical compounds, we have designed and synthesized a series of CBD and Δ8-THC homodimers, and CBD/Δ8-THC heterodimers. The capacity of the dimers to interact with a panel of CNS targets was explored along with the capacity to activate CB1 receptors, as measured by a GIRK channel activation assay. In the panel screen, the dimers were shown to be generally more active toward 5-HT2B and sigma 2 receptors with a range of Ki values from 0.6 to 8.7 μM. These findings provide early evidence that this new class of dimers can serve as novel chemical entities to explore receptor function and the potential for these dimers to have bivalent, bitopic, or dual mechanisms of action.

{"title":"Semi-Synthesis of Dimeric Cannabidiol Derivatives and Evaluation of their Affinity at Neurological Targets","authors":"Zachary Stryker,&nbsp;Jorge I. Castillo-Arellano,&nbsp;Stephen J. Cutler,&nbsp;Michael D. Wyatt and Francisco León*,&nbsp;","doi":"10.1021/acs.jnatprod.4c0117410.1021/acs.jnatprod.4c01174","DOIUrl":"https://doi.org/10.1021/acs.jnatprod.4c01174https://doi.org/10.1021/acs.jnatprod.4c01174","url":null,"abstract":"<p >Cannabidiol (CBD) is a natural product associated with a wide range of biological and therapeutic activities. Despite the widespread cultural acceptance of CBD as a medicinal agent, much remains to be determined regarding its precise mechanism(s) of action in treating multiple conditions. CBD has been shown to promiscuously interact with several neurological targets with varying affinities. To expand the chemical space of phytocannabinoids and develop novel chemical compounds, we have designed and synthesized a series of CBD and Δ<sup>8</sup>-THC homodimers, and CBD/Δ<sup>8</sup>-THC heterodimers. The capacity of the dimers to interact with a panel of CNS targets was explored along with the capacity to activate CB1 receptors, as measured by a GIRK channel activation assay. In the panel screen, the dimers were shown to be generally more active toward 5-HT2B and sigma 2 receptors with a range of <i>K</i><sub><i>i</i></sub> values from 0.6 to 8.7 μM. These findings provide early evidence that this new class of dimers can serve as novel chemical entities to explore receptor function and the potential for these dimers to have bivalent, bitopic, or dual mechanisms of action.</p>","PeriodicalId":47,"journal":{"name":"Journal of Natural Products ","volume":"88 2","pages":"397–414 397–414"},"PeriodicalIF":3.3,"publicationDate":"2025-01-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143507647","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Retraction of "Direct Identification of α-Bisabolol Enantiomers in an Essential Oil Using a Combined Ion Mobility-Mass Spectrometry/Quantum Chemistry Approach".
IF 3.3 2区 生物学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2025-01-24 Epub Date: 2024-12-30 DOI: 10.1021/acs.jnatprod.4c01444
Erik Laurini, Stéphane Andreani, Alain Muselli, Sabrina Pricl, Aura Tintaru
{"title":"Retraction of \"Direct Identification of α-Bisabolol Enantiomers in an Essential Oil Using a Combined Ion Mobility-Mass Spectrometry/Quantum Chemistry Approach\".","authors":"Erik Laurini, Stéphane Andreani, Alain Muselli, Sabrina Pricl, Aura Tintaru","doi":"10.1021/acs.jnatprod.4c01444","DOIUrl":"https://doi.org/10.1021/acs.jnatprod.4c01444","url":null,"abstract":"","PeriodicalId":47,"journal":{"name":"Journal of Natural Products ","volume":"88 1","pages":"231"},"PeriodicalIF":3.3,"publicationDate":"2025-01-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143027466","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Journal of Natural Products
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