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Integrative description of a new species of Dugesia (Platyhelminthes, Tricladida, Dugesiidae) from southern China, with its complete mitogenome and a biogeographic evaluation 综合描述来自中国南方的一种新的 Dugesia(扁形动物,三链目,Dugesiidae),及其完整的有丝分裂基因组和生物地理学评价
IF 2 2区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2024-02-16 DOI: 10.3897/zse.100.114016
Ying Zhu, JiaJie Huang, R. Sluys, Yi Liu, Ting Sun, AN-TAI Wang, Yu Zhang
A new species of freshwater flatworm of the genus Dugesia from Guangdong Province in China is described through an integrative approach, including molecular and morphological data, as well as mitochondrial genome analysis. The new species, Dugesia ancoraria Zhu & Wang, sp. nov., is characterised by: (a) a highly asymmetrical penis papilla, provided with a hunchback-like dorsal bump; (b) a short duct between seminal vesicle and ejaculatory duct; and (c) a postero-ventral course of the ejaculatory duct, which opens to the exterior at the subterminal, ventral part of the penis papilla. The molecular phylogenetic tree obtained from the concatenated dataset of four DNA markers (18S rDNA, ITS-1, 28S rDNA, COI) facilitated determination of the phylogenetic position of the new species, which shares a sister-group relationship with a small clade, comprising D. notogaea Sluys & Kawakatsu, 1998 from Australia and D. bengalensis Kawakatsu, 1983 from India. The circular mitogenome of the new species is 17,705 bp in length, including 12 protein coding genes, two ribosomal genes, and 22 transfer RNAs. Via analysis of gene order of mitochondrial genomes, the presently available pattern of mitochondrial gene rearrangement in the suborder Continenticola is discussed.
通过分子和形态学数据以及线粒体基因组分析等综合方法,描述了产自中国广东省的淡水扁形虫属的一个新物种。新物种 Dugesia ancoraria Zhu & Wang, sp:(a) 阴茎乳头高度不对称,背侧有一驼背状突起;(b) 精囊与射精管之间有一短导管;(c) 射精管后外侧走向,在阴茎乳头腹侧近端向外开口。从四个 DNA 标记(18S rDNA、ITS-1、28S rDNA、COI)的数据集中获得的分子系统发生树有助于确定该新物种的系统发生位置,它与一个小支系(包括澳大利亚的 D. notogaea Sluys & Kawakatsu,1998 年和印度的 D. bengalensis Kawakatsu,1983 年)属于姊妹群关系。新物种的环形有丝分裂基因组长度为 17 705 bp,包括 12 个蛋白质编码基因、2 个核糖体基因和 22 个转移 RNA。通过对线粒体基因组基因顺序的分析,讨论了目前大陆虫亚目线粒体基因重排的模式。
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引用次数: 0
Updated taxonomy and new insights into the evolutionary relationships of the genus Sporonchulus Cobb, 1917 (Nematoda, Mononchida) after the study of two Vietnamese species 对两个越南物种的研究更新了孢子虫属的分类法,并对其进化关系有了新的认识 Cobb, 1917 (Nematoda, Mononchida)
IF 2 2区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2024-02-15 DOI: 10.3897/zse.100.118675
T. Vu, Anh D. Nguyen, Thi Mai Linh Le, R. Peña‐Santiago
Two known species of the genus Sporonchulus, namely S. ibitiensis and S. vagabundus, collected from natural areas of Vietnam, are characterized, including descriptions and illustrations of both species, as well as SEM observations and molecular (18S-, 28S rDNA) analyses of S. ibitiensis. The identity of the two species is discussed, with detailed comparison with previously known populations. The taxonomy of the genus is updated, presenting a diagnosis, list of species, key to their identification, and a compendium of their main morphometrics. An integrative analysis, combining morphological data with a cladistic approach and the first molecular study for a representative of Sporonchulus, better supports a narrow relationship of this genus with Mononchidae than with Mylonchulidae members, however further research should be conducted to elucidate its phylogeny.
本文介绍了从越南自然区域采集的两个已知的Sporonchulus属物种,即S. ibitiensis和S. vagabundus,包括这两个物种的描述和图解,以及S. ibitiensis的扫描电镜观察和分子(18S-, 28S rDNA)分析。讨论了这两个物种的身份,并与之前已知的种群进行了详细比较。对该属的分类进行了更新,提出了诊断方法、物种清单、识别关键和主要形态特征简编。结合形态学数据、宗族学方法和首次对Sporonchulus代表种的分子研究进行的综合分析,更好地支持了该属与Mononchidae而非Mylonchulidae成员的狭义关系,但仍需进一步研究以阐明其系统发育。
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引用次数: 0
Updated taxonomy and new insights into the evolutionary relationships of the genus Sporonchulus Cobb, 1917 (Nematoda, Mononchida) after the study of two Vietnamese species 对两个越南物种的研究更新了孢子虫属的分类法,并对其进化关系有了新的认识 Cobb, 1917 (Nematoda, Mononchida)
IF 2 2区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2024-02-15 DOI: 10.3897/zse.100.118675
T. Vu, Anh D. Nguyen, Thi Mai Linh Le, R. Peña‐Santiago
Two known species of the genus Sporonchulus, namely S. ibitiensis and S. vagabundus, collected from natural areas of Vietnam, are characterized, including descriptions and illustrations of both species, as well as SEM observations and molecular (18S-, 28S rDNA) analyses of S. ibitiensis. The identity of the two species is discussed, with detailed comparison with previously known populations. The taxonomy of the genus is updated, presenting a diagnosis, list of species, key to their identification, and a compendium of their main morphometrics. An integrative analysis, combining morphological data with a cladistic approach and the first molecular study for a representative of Sporonchulus, better supports a narrow relationship of this genus with Mononchidae than with Mylonchulidae members, however further research should be conducted to elucidate its phylogeny.
本文介绍了从越南自然区域采集的两个已知的Sporonchulus属物种,即S. ibitiensis和S. vagabundus,包括这两个物种的描述和图解,以及S. ibitiensis的扫描电镜观察和分子(18S-, 28S rDNA)分析。讨论了这两个物种的身份,并与之前已知的种群进行了详细比较。对该属的分类进行了更新,提出了诊断方法、物种清单、识别关键和主要形态特征简编。结合形态学数据、宗族学方法和首次对Sporonchulus代表种的分子研究进行的综合分析,更好地支持了该属与Mononchidae而非Mylonchulidae成员的狭义关系,但仍需进一步研究以阐明其系统发育。
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引用次数: 0
A new species of krait of the genus Bungarus (Squamata, Elapidae) from Ratchaburi Province, western Thailand 泰国西部叻丕府出土的一种新石龙子(有鳞目,石龙子科)。
IF 2 2区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2024-01-30 DOI: 10.3897/zse.100.116601
Akrachai Aksornneam, Attapol Rujirawan, Siriporn Yodthong, Yik‐Hei Sung, A. Aowphol
We described a new species of elapid snake genus Bungarus from the Tenasserim Mountain Range in Ratchaburi Province, western Thailand. Bungarus sagittatus sp. nov. can be distinguished from all congeners by having the combination of 15 dorsal scale rows; 215–217 ventral scales; 48–56 undivided subcaudal; prefrontal suture 2.4–2.6 times length of internasal suture; anterior chin shields larger than posterior chin shields; head of adult uniform black while juvenile black with small dim white patches on temporal and parietal areas; dorsal body black, with 25–31 white narrow bands, white and black bands at midbody covering 1.5–3.0 and 4.5–6.0 vertebral scales, respectively; dorsal body black bands not intruding ventrals or intruding ventrals less than 0.5 times of width of outer dorsal scales; ventral surface of body immaculate white; ventral side of tail white with a row of dark brown triangular patches on middle pointing posteriorly; tail relatively long, tail length/total length 0.140–0.143. Genetically, the new species has uncorrected pairwise divergences of ≥ 8.29% of the mitochondrial cytochrome b from other Bungarus species. Currently, the new species is only known from the type locality.
我们描述了产自泰国西部叻丕府Tenasserim山脉的伶蛇属Bungarus新种。Bungarus sagittatus sp. nov.与所有同属种的区别在于:背鳞15排;腹鳞215-217片;尾下48-56片不裂;前额缝长2.4-2.成体头部均匀黑色,幼体头部黑色,颞部和顶叶有小的暗白色斑块;体背黑色,有 25-31 条白色窄带,体中部有白色和黑色条带,分别覆盖 1.5-3.0 个和 4.5-3.0 个鳞片。体背黑色,有 25-31 条白色窄带,体中部白色和黑色窄带分别覆盖 1.5-3.0 个和 4.5-6.0 个椎鳞;体背黑色窄带不侵入腹面或侵入腹面的宽度小于体背外侧鳞片宽度的 0.5 倍;体腹面洁白无瑕;尾腹面白色,中间有一排黑褐色三角形斑块,指向后方;尾较长,尾长/总长 0.140-0.143。在遗传学上,新种与其他 Bungarus 种类的线粒体细胞色素 b 的未校正配对差异≥ 8.29%。目前,该新种仅在模式产地为人所知。
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引用次数: 0
Morphological and molecular support for Amphithrax verrucosus (H. Milne Edwards, 1832) and Amphithrax aculeatus (Herbst, 1790) (Crustacea, Decapoda, Brachyura) as valid species 从形态学和分子学角度支持Amphithrax verrucosus (H. Milne Edwards, 1832) 和 Amphithrax aculeatus (Herbst, 1790) (Crustacea, Decapoda, Brachyura) 为有效种
IF 2 2区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2024-01-26 DOI: 10.3897/zse.100.109192
Nadeshinie Parasram, William Santana, Yvonne Vallès, A. Windsor, Henri Vallès
The large degree of morphological variations, particularly amongst juveniles, has led to inconsistencies in the literature regarding the taxonomic status of Amphithrax aculeatus (Herbst, 1790) and Amphithrax verrucosus (H. Milne Edwards, 1832). As a result of recent biodiversity sampling initiatives in Barbados, West Indies, multiple specimens of Amphithrax aculeatus and A. verrucosus have been collected. This has prompted us to undertake a thorough reassessment of their morphological and molecular characteristics. Moreover, morphological differences in the carapace, antennae, chelipeds, pereopods and the male first gonopod (G1) supports A. aculeatus and A. verrucosus as separate species. Molecular phylogenetic analysis, based on newly-generated sequences of the 12S rRNA, 16S rRNA and ITS-1 genes also shows that A. verrucosus is a separate species and sister taxa to A. aculeatus. The total number of species within the genus Amphithrax is now brought to eleven. However, our molecular analysis also shows that the taxonomic placement of Amphithrax armatus (Saussure, 1853) within Amphithrax is questionable.
Amphithrax aculeatus(Herbst,1790 年)和 Amphithrax verrucosus(H. Milne Edwards,1832 年)的形态差异很大,尤其是幼体之间的差异,导致文献中关于它们的分类地位不一致。由于最近在西印度群岛巴巴多斯开展的生物多样性采样活动,我们采集到了多份 Aphithrax aculeatus 和 A. verrucosus 的标本。这促使我们对它们的形态和分子特征进行了彻底的重新评估。此外,Amphithrax aculeatus 和 A. verrucosus 在甲壳、触角、螯足、围足和雄性第一节足(G1)上的形态差异也支持将它们作为独立的物种。基于新产生的 12S rRNA、16S rRNA 和 ITS-1 基因序列的分子系统学分析也表明,疣螈是一个独立的种,是疣螈的姊妹类群。至此,Amphithrax 属的物种总数达到 11 个。然而,我们的分子分析也表明,Amphithrax armatus(Saussure,1853 年)在 Amphithrax 属中的分类地位值得商榷。
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引用次数: 0
Additions to the knowledge on the genus Phintella Strand, 1906 (Araneae, Salticidae, Chrysillini) from India 对印度 Phintella Strand, 1906 属(鹤形目,鮨科,蝶形目)知识的补充
IF 2 2区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2024-01-26 DOI: 10.3897/zse.100.113049
P. P. Sudhin, J. Caleb, Souvik Sen
Four new species of the chrysilline genus Phintella – P. dentissp. nov. (♂♀), P. handersonisp. nov. (♂♀), P. lunasp. nov. (♀) and P. rajbharathisp. nov. (♂) – are described from India. Additionally, the unknown female of Phintella platnicki Sudhin, Sen & Caleb, 2023 is described and new distributional data are provided for this species. Notes on the type locality and distribution of P. accentifera (Simon, 1901) are provided along with clarification on the identity of other non-type materials. Detailed morphological descriptions, illustrations and a distributional map are also given.
新种(♂♀)、P. handersonisp.nov.(♂♀)、P. lunasp.nov.(♀)和P. rajbharathisp.nov.(♂)。此外,描述了Phintella platnicki Sudhin, Sen & Caleb, 2023的未知雌性,并为该种提供了新的分布数据。accentifera (Simon, 1901) 的模式产地和分布情况,并澄清了其他非模式材料的身份。此外还提供了详细的形态描述、插图和分布图。
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引用次数: 0
The trouts of the Marmara and Aegean Sea drainages in Türkiye, with the description of a new species (Teleostei, Salmonidae) 图尔基耶马尔马拉海和爱琴海流域的鳟鱼,并描述了一个新物种(鱼类,鲑科)
IF 2 2区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2024-01-26 DOI: 10.3897/zse.100.112557
D. Turan, Esra Bayçelebi, Sadi Aksu, Münevver Oral
The taxonomic status of native trout species of the Marmara and Aegean Sea drainages is evaluated and three species, Salmo duhani, S. coruhensis and S. brunoisp. nov., are recognized. Salmo brunoi, a new species, is described from the Nilüfer River, a tributary of the Susurluk River. It is distinguished by a general brownish body color in life; few black spots (fewer than 60) on the body, generally scattered on the back and the upper part of the flank, rarely in the median part; few (fewer than 40) and small (smaller than pupil) red spots on the body, scattered on the median part and lower half of the flank; a number of black and red spots not increasing with size in both sexes; a long adipose fin (adipose-fin height 8–9% SL); a short distance between adipose-fin and caudal-fin (12–14% SL); and a short anal fin (anal-fin height 12–15% SL). Salmo brunoisp. nov. is separated from the rest of the Marmara and Aegean trouts of Anatolia based on genome-wide distributed 187.385 unlinked SNP markers. According to the best of the authors’ knowledge, whole genome data is used for the first time here to characterize a new species of trout.
评估了马尔马拉和爱琴海流域本地鳟鱼物种的分类状况,并确认了三个物种:Salmo duhani、S. coruhensis 和 S. brunoisp.Salmo brunoi 是一个新物种,描述于苏苏鲁克河的支流 Nilüfer 河。它的特征是生前体色一般为棕色;体表有少量黑斑(少于 60 个),一般散布在背部和侧腹上部,很少散布在正中部位;体表有少量(少于 40 个)小红斑(小于瞳孔),散布在正中部位和侧腹下半部;黑色和红色斑点的数量不会随着雌雄个体的大小而增加;脂肪鳍较长(脂肪鳍高度为 8-9% SL);脂肪鳍与尾鳍之间的距离较短(12-14% SL);臀鳍较短(臀鳍高度为 12-15% SL)。根据全基因组分布的 187.385 个非连锁 SNP 标记,Salmo brunoisp.据作者所知,这是首次利用全基因组数据来描述鳟鱼新物种的特征。
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引用次数: 0
Description of a new species of Phoxinus from the Ergene River (Aegean Sea Basin) in Türkiye (Actinopterygii, Leuciscidae) 描述来自蒂尔基耶埃尔金河(爱琴海流域)的一个 Phoxinus 新种(翼手目,鯈鱼科)
IF 2 2区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2024-01-26 DOI: 10.3897/zse.100.113467
Esra Bayçelebi, I. Aksu, D. Turan
Phoxinus radeki, a new species, is described from the Ergene River (Aegean Sea Basin). It is distinguished from Phoxinus species in Türkiye and the adjacent area by having the scales of the breast, scaled but separated unscaled area anteriorly, short dark rectangular blotches along the lateral line between the lateral line and belly yellowish in both males and females, body depth dorsal fin origin 16–21% SL, caudal peduncle depth 8–10% SL. Additionally, molecular results demonstrated that the new species differed from its closest congeners with a mean genetic distance value of 3.08% (min. 2.82–max. 3.29) and moderately support values in cytochrome b (Cyt b) gene partial sequences (1064 bp.). Further, the species delimitation analysis identified the new species as a single MOTU independent of other Phoxinus species.
新种Phoxinus radeki产于埃尔金河(爱琴海流域)。它与图尔基耶及其邻近地区的鲈鱼物种的区别在于:雌雄鲈鱼的胸部均有鳞片,前部有鳞片但无鳞片区域分开,侧线与腹部之间有短的深色矩形斑点,体深背鳍起源16-21% SL,尾柄深度8-10% SL。此外,分子研究结果表明,该新物种与其最近的同属物种的平均遗传距离值为 3.08%(最小值 2.82-最大值 3.29),细胞色素 b(Cyt b)基因部分序列(1064 bp.)的支持值为中等。此外,物种划界分析确定该新物种为独立于其他麝属物种的单一 MOTU。
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引用次数: 0
A new species of Ditha (Pseudoscorpiones, Chthoniidae, Tridenchthoniinae) from the Western Ghats of India, with an identification key for the genus 来自印度西高止山脉的 Ditha 新种(伪蝎科、蝎属、蝎科),附该属的识别钥匙
IF 2 2区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2024-01-26 DOI: 10.3897/zse.100.110020
Kyung-Hoon Jeong, Danilo Harms, Jithin Johnson
A new species of the pseudoscorpion genus Ditha Chamberlin, 1929, is described from Kerala State, India. A detailed morphological description, diagnostic features, and illustrations of Ditha (Paraditha) shivanparaensis Jeong, Harms & Johnson, sp. nov. are provided. The current distribution of all the known Ditha species is mapped, and an identification key for the genus is provided.
本文描述了产自印度喀拉拉邦的一种伪蝎属新物种 Ditha Chamberlin, 1929。本文提供了 Ditha (Paraditha) shivanparaensis Jeong, Harms & Johnson, sp. nov.的详细形态描述、诊断特征和插图。绘制了目前所有已知 Ditha 物种的分布图,并提供了该属的鉴定检索表。
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引用次数: 0
Population variation of Diapoma pampeana (Characiformes, Characidae, Stevardiinae) from an isolated coastal drainage in Uruguay, with new records: comparing morphological and molecular data 来自乌拉圭一个孤立的沿海排水沟的 Diapoma pampeana(鳞栉目、鳞栉科、鳞栉属)的种群变异及新记录:形态学和分子数据比较
IF 2 2区 生物学 Q2 Agricultural and Biological Sciences Pub Date : 2024-01-26 DOI: 10.3897/zse.100.112778
J. Vanegas-Ríos, Wilson Sebastián Serra Alanís, M. Azpelicueta, Thomas Litz, L. Malabarba
Diapoma pampeana was recently described to occur in the upper Negro basin in Uruguay and Brazil. An isolated population tentatively identified as D. pampeana from the Pando stream, a perturbed coastal drainage in Uruguay, is studied and compared under the light of morphological and molecular data to test if there is evidence to consider it as a separate species. New geographical records for the species are presented and included in the comparisons. The specimens analyzed were pooled into four groups: Pando, Santa Lucía, Middle Negro and Upper Negro. We analyzed 32 morphological characters using statistical procedures and recovered a COI-based phylogeny of different populations of D. pampeana to test if they may represent different species. Size-corrected PCA revealed that the Pando and Upper Negro groups are greatly diverging in both morphometric and meristic data along PC1 (mainly by the snout to dorsal-fin origin, dorsal to adipose-fin origins, number of longitudinal scales and predorsal scales). This deviating pattern was also obtained in a cluster analysis. The Santa Lucía and Middle Negro groups were found to be intermediate morphotypes. In contrast, molecular analyses revealed that the Pando and Upper Negro specimens resemble genetically and, thus, are placed together in the Neighbor-joining and Bayesian topologies, as part of a monophyletic Diapoma. We proposed that the Pando population, despite its deviating morphology observed, can be classified as D. pampeana. Therefore, this population constitutes a remarkable example of an isolated population that is morphologically divergent but genetically similar to the geographically most distant conspecific population.
Diapoma pampeana最近被描述为出现在乌拉圭和巴西的上内格罗河流域。pampeana 的一个孤立种群进行了研究,并根据形态学和分子数据对其进行了比较,以检验是否有证据将其视为一个单独的物种。比较中还介绍了该物种的新地理记录。分析的标本共分为四组:潘多、圣卢西亚、中内格罗和上内格罗。我们使用统计程序分析了 32 个形态特征,并恢复了 D. pampeana 不同种群的基于 COI 的系统发育,以检验它们是否可能代表不同的物种。经尺寸校正的 PCA 显示,潘多和上内格罗两组在形态和经体数据上沿 PC1(主要是吻鳍至背鳍起源、背鳍至脂肪鳍起源、纵鳞数量和食肉鳞)有很大差异。聚类分析也得出了这种偏离模式。圣卢西亚组和中内格罗组被认为是中间形态。相反,分子分析表明,潘多和上内格罗的标本在基因上相似,因此在邻接拓扑和贝叶斯拓扑中被放在一起,成为单系Diapoma的一部分。我们认为,尽管潘多种群的形态有偏差,但仍可归类为 D. pampeana。因此,该种群构成了一个孤立种群的杰出范例,该种群在形态上与地理上最遥远的同种种群存在差异,但在遗传学上却与之相似。
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引用次数: 0
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Zoosystematics and Evolution
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