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Five-year survival of patients with non-small cell lung cancer treated with alkalization therapy 碱化治疗非小细胞肺癌患者的5年生存率。
IF 5 2区 医学 Q2 Medicine Pub Date : 2026-03-01 Epub Date: 2026-01-21 DOI: 10.1016/j.tranon.2026.102677
Shion Kachi , Kazuyuki Suzuki , Reo Hamaguchi , Ryoko Narui , Hiromasa Morikawa , Hiromi Wada
Acidic tumor microenvironments promote malignant progression, immune evasion, and drug resistance. This single-center retrospective cohort study evaluated whether, among patients with stage IV non-small cell lung cancer (NSCLC) who participated in a pragmatic “alkalization therapy”—defined as a low potential renal acid load diet plus oral sodium bicarbonate and/or potassium/sodium citrate—urinary pH was associated with long-term survival, and whether these associations differed by EGFR/ALK mutation status. Urinary pH was used as a surrogate marker of systemic alkalization. All consecutive patients with stage IV NSCLC who first attended Karasuma Wada Clinic between January 2014, and December 2019 were included (n = 203; EGFR/ALK mutation-negative, n = 100; EGFR/ALK mutation-positive, n = 103). All outpatients received standardized instruction in alkalization therapy. For each patient, a mean urine pH value (excluding the first visit) was calculated. Survival was analyzed using Kaplan–Meier methods with log-rank and Gehan–Breslow–Wilcoxon tests, and Cox proportional hazards regression models incorporating recurrence status and urine pH. Overall, the 5-year survival rate was 49·0 % and was similar by mutation status (EGFR/ALK mutation-positive, 49·9 %; EGFR/ALK mutation-negative, 48·6 %). Among EGFR/ALK mutation-negative patients, postoperative recurrence was associated with a more favorable outcome than de novo stage IV disease at initial diagnosis (5-year survival 65·5 % vs 42·0 %; log-rank p = 0·02). In this subgroup, a mean urine pH ≥7·5 was associated with superior 5-year survival (70·0 % vs 39·3 %; log-rank p = 0·04). Given potential confounding, this shows association—not a causal benefit. Urinary pH may serve as a pragmatic marker of acid–base status, particularly in EGFR/ALK-mutation-negative disease.
酸性肿瘤微环境促进恶性进展、免疫逃避和耐药。这项单中心回顾性队列研究评估了IV期非小细胞肺癌(NSCLC)患者参加实用的“碱化治疗”(定义为低潜在肾酸负荷饮食加口服碳酸氢钠和/或柠檬酸钾/钠)尿液pH是否与长期生存相关,以及这些关联是否因EGFR/ALK突变状态而异。尿液pH值作为全身碱化的替代指标。纳入2014年1月至2019年12月期间首次就诊的所有连续IV期NSCLC患者(n = 203; EGFR/ALK突变阴性,n = 100; EGFR/ALK突变阳性,n = 103)。所有门诊患者均接受标准化的碱化治疗指导。计算每位患者的平均尿液pH值(不包括第一次就诊)。采用Kaplan-Meier法、log-rank检验和Gehan-Breslow-Wilcoxon检验,以及纳入复发状态和尿ph的Cox比例风险回归模型分析生存率。总体而言,5年生存率为49.0%,突变状态相似(EGFR/ALK突变阳性,49.9%;EGFR/ALK突变阴性,48.6%)。在EGFR/ALK突变阴性的患者中,术后复发比初始诊断时的新发IV期疾病更有利(5年生存率为65.5% vs 42.0%; log-rank p = 0.02)。在该亚组中,平均尿液pH≥7.5与较好的5年生存率相关(70% vs 39.3%; log-rank p = 0.04)。考虑到潜在的混淆,这显示了关联,而不是因果关系。尿pH值可以作为酸碱状态的实用标记,特别是在EGFR/ alk突变阴性的疾病中。
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引用次数: 0
Obesity and cancer: Relevance of DNA damage response 肥胖和癌症:DNA损伤反应的相关性
IF 5 2区 医学 Q2 Medicine Pub Date : 2026-03-01 Epub Date: 2026-01-15 DOI: 10.1016/j.tranon.2025.102657
Bhavana Deshmukh , Amrendra Kumar Ajay , Manoj Kumar Bhat
Obesity is a non-communicable, multifactorial disorder that has steadily emerged as one of the major global health concerns. It significantly increases the risk of diabetes, cardiovascular diseases and cancer. In obesity, the accumulation of excess fat causes increase in the circulatory levels of adipose tissue-specific hormones (adipokines) and exacerbates carbohydrate-fuelled metabolic stress. These factors promote oxidative and genotoxic stress, resulting in chronic inflammation. Moreover, obesity-related factors contribute to increase in DNA damage and disrupt the DNA Damage Response (DDR), thereby promoting genomic instability. Consequently, obesity may facilitate a complex, multi-step process of cellular transformation and cancer progression. However, the mechanisms linking obesity-associated DDR alterations to cancer progression are active areas of investigation. Therefore, elucidating these aspects of DDR in obesity could enhance our understanding of the risk assessment and facilitate advancement in treatment strategies for patients with cancers and obesity.
肥胖是一种非传染性、多因素疾病,已逐渐成为全球主要健康问题之一。它大大增加了患糖尿病、心血管疾病和癌症的风险。在肥胖中,过量脂肪的积累导致脂肪组织特异性激素(脂肪因子)循环水平的增加,并加剧碳水化合物驱动的代谢压力。这些因素促进氧化应激和基因毒性应激,导致慢性炎症。此外,肥胖相关因素导致DNA损伤增加,破坏DNA损伤反应(DDR),从而促进基因组不稳定。因此,肥胖可能促进了一个复杂的、多步骤的细胞转化和癌症进展过程。然而,将肥胖相关的DDR改变与癌症进展联系起来的机制是研究的活跃领域。因此,阐明肥胖中DDR的这些方面可以增强我们对风险评估的理解,促进癌症和肥胖患者治疗策略的进步。
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引用次数: 0
Tumor-stroma contributes to immunotherapeutic resistance in non-small cell lung cancer via SEMA3C-mediated immunosuppressive tumor microenvironment 肿瘤基质通过sema3c介导的免疫抑制肿瘤微环境促进非小细胞肺癌的免疫治疗耐药。
IF 5 2区 医学 Q2 Medicine Pub Date : 2026-03-01 Epub Date: 2026-01-19 DOI: 10.1016/j.tranon.2026.102679
Huanyan Zhang , Hongxin Lin , Jian Wang , Di Wu , Qian Wang , Jie Mei , Qing Li , Yichao Zhu , Yun Cai

Background

The tumor-stroma proportion (TSP) was a critical factor influencing clinical outcomes in non-small cell lung cancer (NSCLC). However, the underlying molecular mechanisms driving TSP-associated aggressiveness and its contribution to immune checkpoint blockade (ICB) resistance remained poorly understood.

Methods

Using H&E staining data from the TCGA-NSCLC cohort, patients were stratified into TSP-high and low groups. Transcriptomic profiling and single-cell RNA sequencing (scRNA-seq) were employed to identify the TSP signatures. Functional validation was conducted to investigate the role of SEMA3C in cancer-associated fibroblasts (CAFs) and its influence to tumor cells and T cells.

Results

TSP-high status independently predicted worse overall survival (OS) and correlated with ICB resistance. Transcriptomic analysis identified seven TSP-related genes enriched in stromal fibroblasts. Among these signatures, SEMA3C emerged as the key TSP biomarker associated with an immunosuppressive tumor microenvironment (TME) and ICB resistance in NSCLC. Functionally, SEMA3C knockdown in CAFs suppressed their migratory capacity and collagen production. Co-culture experiments demonstrated that compared to SEMA3C-knockdown CAFs, control CAFs significantly enhanced tumor cell migration and invasion while suppressing the activation and proliferation of CD8⁺ T cells. Strikingly, in vivo targeting of SEMA3C inhibited tumor growth.

Conclusion

TSP served as an independent prognostic biomarker and predictor of ICB resistance in NSCLC. SEMA3C was identified as a crucial mediator within this axis, promoting tumor malignancy and fostering an immunosuppressive TME characterized by stromal remodeling and excluded anti-tumor immunity. This study established TSP as a clinically relevant stratification tool and revealed stromal-immune crosstalk.
背景:肿瘤-间质比例(TSP)是影响非小细胞肺癌(NSCLC)临床预后的关键因素。然而,驱动tsp相关侵袭性的潜在分子机制及其对免疫检查点阻断(ICB)抗性的贡献仍然知之甚少。方法:利用TCGA-NSCLC队列的H&E染色数据,将患者分为tsp高组和低组。利用转录组学分析和单细胞RNA测序(scRNA-seq)来鉴定TSP的特征。通过功能验证研究SEMA3C在癌症相关成纤维细胞(CAFs)中的作用及其对肿瘤细胞和T细胞的影响。结果:tsp高状态独立预测较差的总生存期(OS),并与ICB耐药相关。转录组学分析鉴定了间质成纤维细胞中富集的7个tsp相关基因。在这些特征中,SEMA3C成为与非小细胞肺癌免疫抑制肿瘤微环境(TME)和ICB耐药相关的关键TSP生物标志物。功能上,CAFs中SEMA3C的下调抑制了它们的迁移能力和胶原蛋白的产生。共培养实验表明,与sema3c敲低的CAFs相比,对照CAFs显著增强了肿瘤细胞的迁移和侵袭,同时抑制了CD8 + T细胞的活化和增殖。引人注目的是,在体内靶向SEMA3C抑制肿瘤生长。结论:TSP可作为非小细胞肺癌ICB耐药的独立预后生物标志物和预测因子。SEMA3C被认为是该轴上的一个关键介质,促进肿瘤恶性并促进以基质重塑和排除抗肿瘤免疫为特征的免疫抑制性TME。本研究确立了TSP作为临床相关的分层工具,并揭示了基质-免疫串扰。
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引用次数: 0
Improving photodynamic therapy efficacy in bladder cancer using polymer micelle-encapsulated pheophorbide a 聚合物胶束包封磷素a提高膀胱癌光动力治疗效果。
IF 5 2区 医学 Q2 Medicine Pub Date : 2026-03-01 Epub Date: 2026-02-06 DOI: 10.1016/j.tranon.2026.102687
Maxime Labroy , Stéphane Chabaud , Maud Durand , Isabelle Fourquaux , Stéphane Bolduc , François Bordeleau , Laure Gibot

Background

Photodynamic diagnosis (PDD) is widely used in bladder cancer management, enabling fluorescence-guided detection of lesions through intravesical administration of photosensitizers such as hexaminolevulinate (Cysview®/Hexvix®). Building on this clinical framework, we explored photodynamic therapy (PDT) using pheophorbide a (pheo), a chlorophyll-based photosensitizer, encapsulated in self-assembled poly(ethylene oxide)-block-poly(ε-caprolactone) (PEO5000-PCL4000) micelles.

Results

In vitro assays were performed on human bladder cancer cell lines, namely the grade 3 invasive T24 and the grade 1 SW780, in both 2D monolayers and 3D spheroid cultures. In 2D, encapsulated pheo showed higher phototoxicity (IC₅₀: 129 nM T24, 156 nM SW780), while free pheo exhibited negligible effects, preventing IC₅₀ determination. Two-photon microscopy confirmed that encapsulation markedly enhanced pheo penetration, especially in T24. SW780 spheroids exhibited tight epithelial features and low permeability, forming characteristic microbladder-like vesicles. PDT reduced viability in both T24 and SW780 3D models, with a significant advantage for encapsulated pheo at day 6 post-treatment in T24 spheroids. Preliminary exploration in human tissue-engineered bladder tumor substitutes demonstrated the feasibility for PDT assessment in complex 3D environments, warranting further study.

Conclusions

These findings support polymer nanocarrier-mediated pheo delivery as a promising therapeutic approach and pave the way for integrated diagnostic–therapeutic strategies using existing intravesical platforms.
背景:光动力诊断(PDD)广泛应用于膀胱癌治疗,通过膀胱内给药光敏剂(如六检吲哚乙酸酯(Cysview®/Hexvix®)),荧光引导检测病变。在此临床框架的基础上,我们探索了光动力疗法(PDT)使用含磷物a (pheo),一种基于叶绿素的光敏剂,封装在自组装聚(环氧乙烷)-块聚(ε-己内酯)(PEO5000-PCL4000)胶束中。结果:对3级浸润性膀胱癌细胞株T24和1级SW780进行了体外二维单层和三维球形培养。在2D中,封装的pheo表现出更高的光毒性(IC₅₀:129 nM T24, 156 nM SW780),而自由的pheo表现出可以忽略不计的影响,从而阻止了IC₅₀的测定。双光子显微镜证实包封明显增强了苯酚的渗透,尤其是在T24中。SW780球体表现出紧密的上皮特征和低渗透性,形成特征性的微囊样囊泡。PDT降低了T24和SW780 3D模型的活力,但在T24球体处理后第6天,封装的pheo具有显著优势。对人类组织工程膀胱肿瘤替代品的初步探索表明,在复杂的3D环境中进行PDT评估是可行的,值得进一步研究。结论:这些发现支持聚合物纳米载体介导的pheo递送作为一种有希望的治疗方法,并为利用现有的膀胱内平台进行综合诊断治疗策略铺平了道路。
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引用次数: 0
WISP1 is the stromal-secreting oncoprotein via paracrine downregulation of NDRG1, KAI1, and Maspin in human bladder cancer cells WISP1是人膀胱癌细胞中通过旁分泌下调NDRG1、KAI1和Maspin而产生的间质分泌癌蛋白
IF 5 2区 医学 Q2 Medicine Pub Date : 2026-03-01 Epub Date: 2026-01-28 DOI: 10.1016/j.tranon.2026.102680
Syue-Ting Chen , Kang-Shuo Chang , Chen-Pang Hou , Wei-Yin Lin , Shu-Yuan Hsu , Hsin-Ching Sung , Tsui-Hsia Feng , Yu-Hsiang Lin , Horng-Heng Juang
WNT1 inducible signaling pathway protein 1 (WISP1) is a connective tissue growth factor that regulates various cellular functions in different tissues but has yet to be examined in the human bladder. Two isoforms of WISP1 (WISP1v1 and WISP1v2) expressed only in bladder fibroblast (HBdSF) and smooth muscle (HBdSMC) cells but not in bladder cancer cells in vitro. TNF-α treatment-induced IL-6, CXCL5, and SDF-1 expressions in bladder stroma cells. TNF-α-induced IL-6 depends on the WISP1, and the TNF-α-activation was suppressed under CAPE treatment. WISP1-knockdown inhibited the proliferation and contraction of HBdSMC and HBdSF cells, while the conditioned media from either ectopic WISP1v1- or WISP1v2-overexpressed 293T cells stimulated both the proliferation of HBdSF and HBdSMC cells. The supernatant of WISP1-knockdown in HBdSMC cells reduced the migration of bladder carcinoma T24 cells. WISP1v1, but not WISP1v2, enhanced cell growth, migration, and invasion in bladder cancer cells via downregulating NDRG1, KAI1, and Maspin expressions. Silico's analysis confirmed that WISP1 is a potential oncogene in human bladder cancer. Results suggest that WISP1, a stroma-specific secreted protein, modulates the behavior of bladder stroma cells via autocrine signaling. WISP1 induces tumor growth of bladder carcinoma cells in an isoform-dependent manner via paracrine signaling, indicating that WISP1 may behave as a mediator linking diseases of the human bladder.
WNT1诱导信号通路蛋白1 (WISP1)是一种结缔组织生长因子,在不同组织中调节多种细胞功能,但尚未在人膀胱中进行研究。WISP1的两种亚型(WISP1v1和WISP1v2)仅在膀胱成纤维细胞(HBdSF)和平滑肌细胞(HBdSMC)中表达,而在体外膀胱癌细胞中不表达。TNF-α治疗诱导膀胱基质细胞中IL-6、CXCL5和SDF-1的表达。TNF-α-诱导的IL-6依赖于WISP1,在CAPE处理下TNF-α-活化被抑制。wisp1 -敲低抑制HBdSMC和HBdSF细胞的增殖和收缩,而来自异位WISP1v1-或wisp1v2 -过表达的293T细胞的条件培养基均刺激HBdSF和HBdSMC细胞的增殖。HBdSMC细胞中低敲入wisp1的上清液可减少膀胱癌T24细胞的迁移。WISP1v1,而不是WISP1v2,通过下调NDRG1、KAI1和Maspin的表达来增强膀胱癌细胞的生长、迁移和侵袭。silo的分析证实了WISP1是人类膀胱癌的潜在致癌基因。结果表明,WISP1是一种基质特异性分泌蛋白,通过自分泌信号调节膀胱基质细胞的行为。WISP1通过旁分泌信号以异构体依赖的方式诱导膀胱癌细胞的肿瘤生长,表明WISP1可能作为人类膀胱疾病的中介。
{"title":"WISP1 is the stromal-secreting oncoprotein via paracrine downregulation of NDRG1, KAI1, and Maspin in human bladder cancer cells","authors":"Syue-Ting Chen ,&nbsp;Kang-Shuo Chang ,&nbsp;Chen-Pang Hou ,&nbsp;Wei-Yin Lin ,&nbsp;Shu-Yuan Hsu ,&nbsp;Hsin-Ching Sung ,&nbsp;Tsui-Hsia Feng ,&nbsp;Yu-Hsiang Lin ,&nbsp;Horng-Heng Juang","doi":"10.1016/j.tranon.2026.102680","DOIUrl":"10.1016/j.tranon.2026.102680","url":null,"abstract":"<div><div>WNT1 inducible signaling pathway protein 1 (WISP1) is a connective tissue growth factor that regulates various cellular functions in different tissues but has yet to be examined in the human bladder. Two isoforms of WISP1 (WISP1v1 and WISP1v2) expressed only in bladder fibroblast (HBdSF) and smooth muscle (HBdSMC) cells but not in bladder cancer cells <em>in vitro</em>. TNF-α treatment-induced IL-6, CXCL5, and SDF-1 expressions in bladder stroma cells. TNF-α-induced IL-6 depends on the WISP1, and the TNF-α-activation was suppressed under CAPE treatment. WISP1-knockdown inhibited the proliferation and contraction of HBdSMC and HBdSF cells, while the conditioned media from either ectopic WISP1v1- or WISP1v2-overexpressed 293T cells stimulated both the proliferation of HBdSF and HBdSMC cells. The supernatant of WISP1-knockdown in HBdSMC cells reduced the migration of bladder carcinoma T24 cells. WISP1v1, but not WISP1v2, enhanced cell growth, migration, and invasion in bladder cancer cells via downregulating NDRG1, KAI1, and Maspin expressions. Silico's analysis confirmed that WISP1 is a potential oncogene in human bladder cancer. Results suggest that WISP1, a stroma-specific secreted protein, modulates the behavior of bladder stroma cells via autocrine signaling. WISP1 induces tumor growth of bladder carcinoma cells in an isoform-dependent manner via paracrine signaling, indicating that WISP1 may behave as a mediator linking diseases of the human bladder.</div></div>","PeriodicalId":48975,"journal":{"name":"Translational Oncology","volume":"65 ","pages":"Article 102680"},"PeriodicalIF":5.0,"publicationDate":"2026-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146079445","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
POSTN⁺ cancer-associated fibroblast–CCL3⁺ macrophage crosstalk defines the immune-excluded tumor microenvironment in clear cell renal cell carcinoma POSTN +癌症相关成纤维细胞- ccl3 +巨噬细胞串扰定义透明细胞肾细胞癌免疫排斥肿瘤微环境
IF 5 2区 医学 Q2 Medicine Pub Date : 2026-03-01 Epub Date: 2026-01-24 DOI: 10.1016/j.tranon.2026.102682
Yingjian Wang , Bingtong Yue , Hongqiang Ni , Jinchun Chen , Run Shi , Zhe Wang , Xinglai Dai , Maolin Sheng

Background

Clear cell renal cell carcinoma (ccRCC) frequently exhibits an immune-excluded tumor microenvironment (TME) that limits the efficacy of immune checkpoint blockade (ICB). However, the stromal–immune interactions responsible for this exclusion remain poorly understood.

Methods

We integrated eight single-cell RNA sequencing datasets, two spatial transcriptomic datasets, and bulk transcriptomic cohorts to construct a comprehensive ccRCC TME atlas. Fibroblast subsets were characterized using clustering, trajectory, transcription-factor regulon, and gene-network analyses. Stromal–immune signaling was assessed using CellChat and NicheNet, and spatial colocalization patterns were validated by SpaGene analysis. Prognostic and therapeutic relevance were evaluated in TCGA-KIRC and ICB-treated cohorts.

Results

Seven fibroblast subtypes were identified, among which periostin (POSTN)–positive cancer-associated fibroblasts (CAFs) were selectively enriched in tumors and exhibited strong activation of TGF-β, PI3K–AKT, and extracellular-matrix pathways. Trajectory and regulon inference revealed GATA6 as a key transcriptional regulator driving fibroblast differentiation toward this ECM-remodeling phenotype. Spatial analyses demonstrated that POSTN⁺ CAFs colocalized with CCL3-positive macrophages at the invasive front, forming a hypoxic, fibrotic niche that excluded CD8⁺ T cells. Ligand–receptor mapping identified reciprocal TGF-β, SPP1, and IL-6 signaling that reinforced fibro-myeloid activation. Activation of the POSTN⁺ CAF–CCL3⁺ macrophage axis correlated with poor survival and reduced response to ICB therapy.

Conclusions

This study defines a spatially organized stromal–immune signaling axis that drives immune exclusion and immunotherapy resistance in ccRCC. Targeting the POSTN⁺ CAF–CCL3⁺ macrophage interaction offers a promising strategy to remodel the fibrotic barrier and restore antitumor immunity.
透明细胞肾细胞癌(ccRCC)经常表现出免疫排斥肿瘤微环境(TME),这限制了免疫检查点阻断(ICB)的疗效。然而,导致这种排斥的基质-免疫相互作用仍然知之甚少。方法整合8个单细胞RNA测序数据集、2个空间转录组数据集和大量转录组队列,构建ccRCC TME图谱。使用聚类、轨迹、转录因子调控和基因网络分析来表征成纤维细胞亚群。使用CellChat和NicheNet评估基质免疫信号,并通过SpaGene分析验证空间共定位模式。在TCGA-KIRC和icb治疗组中评估预后和治疗相关性。结果鉴定出7种成纤维细胞亚型,其中骨膜蛋白(POSTN)阳性的癌相关成纤维细胞(CAFs)在肿瘤中选择性富集,并表现出TGF-β、PI3K-AKT和细胞外基质通路的强激活。轨迹和调控推断显示GATA6是驱动成纤维细胞向这种ecm重塑表型分化的关键转录调节因子。空间分析表明,POSTN + CAFs与侵袭前沿的ccl3阳性巨噬细胞共定位,形成一个缺氧的纤维化生态位,排除了CD8 + T细胞。配体受体定位鉴定了相互的TGF-β、SPP1和IL-6信号,增强了纤维髓细胞的激活。POSTN + ca - ccl3 +巨噬细胞轴的激活与较差的生存率和对ICB治疗的反应降低相关。结论本研究确定了ccRCC中驱动免疫排斥和免疫治疗耐药的空间组织基质免疫信号轴。针对POSTN + ca - ccl3 +巨噬细胞的相互作用,为重塑纤维化屏障和恢复抗肿瘤免疫提供了一种有希望的策略。
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引用次数: 0
Utilization of machine learning algorithms for the identification of the RLN associated prognostic model and feature biomarkers of RLN-related subtypes in breast cancer 利用机器学习算法识别乳腺癌中RLN相关亚型的预后模型和特征生物标志物
IF 5 2区 医学 Q2 Medicine Pub Date : 2026-03-01 Epub Date: 2026-01-24 DOI: 10.1016/j.tranon.2026.102684
Yi Du , Quan Yuan , Hao Yu , Rongjie Ye , Huan Lin , Ge Yu , Ming Niu , Huilei Qiu

Background

Breast cancer (BC) is the most common malignancy afflicting women worldwide, yet the role of relaxin-related genes (RLN) in BC progression remains unclear. This study aims to elucidate the relationship between RLN and BC outcomes through immune microenvironment and metabolic pathway analysis.

Methods

Gene expression and clinical data were collected from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO). Relaxin-related genes were identified using KEGG and Genecard databases. A prognostic model, the RLN Associated Prognostic Model (TRAPM), was established using 101 combinations of 10 machine learning algorithms and validated at the single-cell level. Multi-omics analysis, including the IMvigor210 cohort, was performed to assess TRAPM’s applicability in immunotherapy and drug selection.

Results

TRAPM, comprising nine prognostic genes (MMP1, RXFP1, PRKCZ, JUN, NFKBIA, GNAI2, NOS2, MMP9, and MMP13), showed significant associations with immune and metabolic profiles. Using TRAPM, a novel BC subtype RC3 and its key marker genes (MTHFD1L, CAVIN4, MMP1, ADGRG6, B3GNT5, SMYD2, and TFRC) were identified. Experimental validation through RT-qPCR and Western Blot confirmed the role of these markers in six BRCA cell lines.

Conclusions

The identification of TRAPM and the RC3 subtype enhances our understanding of BC heterogeneity and highlights potential therapeutic targets. This study provides a foundation for personalized treatment strategies by clarifying the biological significance and clinical relevance of the RC3 subtype.
背景:乳腺癌(BC)是全世界女性最常见的恶性肿瘤,然而松弛素相关基因(RLN)在乳腺癌进展中的作用尚不清楚。本研究旨在通过免疫微环境和代谢途径分析来阐明RLN与BC预后的关系。方法收集肿瘤基因组图谱(TCGA)和基因表达图谱(GEO)的基因表达和临床数据。使用KEGG和Genecard数据库鉴定松弛素相关基因。使用10种机器学习算法的101种组合建立了RLN相关预后模型(TRAPM),并在单细胞水平上进行了验证。包括IMvigor210队列在内的多组学分析评估了TRAPM在免疫治疗和药物选择中的适用性。结果strapm包含9个预后基因(MMP1、RXFP1、PRKCZ、JUN、NFKBIA、GNAI2、NOS2、MMP9和MMP13),与免疫和代谢谱有显著相关性。利用TRAPM技术鉴定了一种新型BC亚型RC3及其关键标记基因(MTHFD1L、CAVIN4、MMP1、ADGRG6、B3GNT5、SMYD2和TFRC)。通过RT-qPCR和Western Blot的实验验证证实了这些标记在6种BRCA细胞系中的作用。结论TRAPM和RC3亚型的鉴定增强了我们对BC异质性的理解,并突出了潜在的治疗靶点。本研究阐明了RC3亚型的生物学意义和临床相关性,为制定个性化治疗策略奠定了基础。
{"title":"Utilization of machine learning algorithms for the identification of the RLN associated prognostic model and feature biomarkers of RLN-related subtypes in breast cancer","authors":"Yi Du ,&nbsp;Quan Yuan ,&nbsp;Hao Yu ,&nbsp;Rongjie Ye ,&nbsp;Huan Lin ,&nbsp;Ge Yu ,&nbsp;Ming Niu ,&nbsp;Huilei Qiu","doi":"10.1016/j.tranon.2026.102684","DOIUrl":"10.1016/j.tranon.2026.102684","url":null,"abstract":"<div><h3>Background</h3><div>Breast cancer (BC) is the most common malignancy afflicting women worldwide, yet the role of relaxin-related genes (RLN) in BC progression remains unclear. This study aims to elucidate the relationship between RLN and BC outcomes through immune microenvironment and metabolic pathway analysis.</div></div><div><h3>Methods</h3><div>Gene expression and clinical data were collected from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO). Relaxin-related genes were identified using KEGG and Genecard databases. A prognostic model, the RLN Associated Prognostic Model (TRAPM), was established using 101 combinations of 10 machine learning algorithms and validated at the single-cell level. Multi-omics analysis, including the IMvigor210 cohort, was performed to assess TRAPM’s applicability in immunotherapy and drug selection.</div></div><div><h3>Results</h3><div>TRAPM, comprising nine prognostic genes (MMP1, RXFP1, PRKCZ, JUN, NFKBIA, GNAI2, NOS2, MMP9, and MMP13), showed significant associations with immune and metabolic profiles. Using TRAPM, a novel BC subtype RC3 and its key marker genes (MTHFD1L, CAVIN4, MMP1, ADGRG6, B3GNT5, SMYD2, and TFRC) were identified. Experimental validation through RT-qPCR and Western Blot confirmed the role of these markers in six BRCA cell lines.</div></div><div><h3>Conclusions</h3><div>The identification of TRAPM and the RC3 subtype enhances our understanding of BC heterogeneity and highlights potential therapeutic targets. This study provides a foundation for personalized treatment strategies by clarifying the biological significance and clinical relevance of the RC3 subtype.</div></div>","PeriodicalId":48975,"journal":{"name":"Translational Oncology","volume":"65 ","pages":"Article 102684"},"PeriodicalIF":5.0,"publicationDate":"2026-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146039061","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Targeting cancer stem cells as the most aggressive and tumor-initiating cells 靶向肿瘤干细胞作为最具侵袭性和肿瘤起始细胞
IF 5 2区 医学 Q2 Medicine Pub Date : 2026-03-01 Epub Date: 2026-01-27 DOI: 10.1016/j.tranon.2026.102669
Maryam Sadri , Zahra Shafaghat , Mona Roozbehani , Maryam Dorfaki , Fatemeh Kheiri , Sahel Heidari , Ali Mahmoudi , Fatemeh Faraji
Cancer stem cells (CSCs) are a small subpopulation of tumor cells characterized by their self-renewal capacity and the ability to differentiate into different cell types. These partially differentiated cells exhibit properties of both stem cells and cancer cells. CSCs drive tumor initiation and progression by generating additional stem cells through self-renewal and differentiation into heterogeneous populations of tumor cell. They are among the most aggressive tumor cells that contribute to the development of key features of malignancy such as increased proliferation, metastasis, tumor growth, multidrug resistance (MDR), and resistance to radiotherapy and chemotherapy. CSCs are also associated with relapse and minimal residual disease, highlighting their critical role in cancer persistence. Therefore, targeting CSCs is essential to achieve complete tumor eradication. Available evidence suggests that combination therapies that integrate immunotherapy with cytotoxic therapies to concurrently eliminate CSCs and non-CSCs offer a promising approach to completely eradicate cancer. This review summarizes the current strategies employed to target CSCs and improve cancer treatment outcomes.
肿瘤干细胞(CSCs)是肿瘤细胞的一个小亚群,其特点是具有自我更新能力和分化成不同细胞类型的能力。这些部分分化的细胞表现出干细胞和癌细胞的特性。CSCs通过自我更新和分化成异质肿瘤细胞群来产生额外的干细胞,从而驱动肿瘤的发生和发展。它们是最具侵略性的肿瘤细胞之一,有助于恶性肿瘤的关键特征的发展,如增殖、转移、肿瘤生长、多药耐药(MDR)和对放疗和化疗的耐药。CSCs还与复发和微小残留疾病相关,突出了它们在癌症持续性中的关键作用。因此,靶向CSCs是实现完全根除肿瘤的必要条件。现有证据表明,结合免疫疗法和细胞毒性疗法同时消除CSCs和非CSCs的联合疗法是一种有希望彻底根除癌症的方法。本文综述了目前用于靶向CSCs和改善癌症治疗结果的策略。
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引用次数: 0
Androgen receptor may promote tumor progression via TTF-1/EGFR pathway in metastatic nasopharyngeal carcinoma 雄激素受体可能通过TTF-1/EGFR通路促进转移性鼻咽癌的肿瘤进展。
IF 5 2区 医学 Q2 Medicine Pub Date : 2026-03-01 Epub Date: 2026-02-02 DOI: 10.1016/j.tranon.2026.102670
Chiao-Yun Lin , Chen-Yang Huang , Kar-Wai Lui, Yin-Kai Chao, Chun-Nan Yeh, Li-Yu Lee, Yenlin Huang, Zhangung Yang, Chia-Hsun Hsieh, Hsien-Chi Fan, An-Chi Lin, Kai-Ping Chang, Chien-Yu Lin, Hung-Ming Wang, Mei Chao, Yu-Sun Chang, Hsin-Pai Li, Cheng-Lung Hsu
Nasopharyngeal carcinoma (NPC) is prevalent in Southeast Asia, including Taiwan. It exhibits higher morbidity as well as mortality in males than in females. However, the role of the androgen receptor (AR) in NPC remains unclear. In this study, AR expression was detected in most NPC cell lines and patient-derived xenografts. Treatment with enzalutamide, an antiandrogen, substantially inhibited patient-derived xenografts growth and demonstrated additive antitumor effects when combined with chemotherapy in AR-positive models. Additionally, transcriptome analysis following enzalutamide treatment revealed activation of hypoxia-inducible factor-1, steroid hormone, and AR pathways, alongside suppression of interferon and tumor necrosis factor pathways. Protein analysis further supported these transcriptomic changes. In AR-overexpressing NPC-B13 cells, AR appeared to regulate thyroid transcription factor-1 (TTF-1, encoded by NKX2–1 gene) and its downstream target epidermal growth factor receptor (EGFR), thereby promoting cancer cell proliferation. Furthermore, chromatin immunoprecipitation suggested that AR may directly bind to the NKX2–1 promoter to upregulate its mRNA expression. Under AR overexpression, Epstein-Barr virus (EBV) remained in a latent state, accompanied by suppression of lytic gene expression. Additionally, Epstein–Barr nuclear antigen-1 enhanced AR transactivation in a dose-dependent manner in NPC cell line reporter assays. Among 96 metastatic NPC tumor samples, AR expression was observed in 35 cases (36.5%), predominantly in males (33/83, 39.8%). AR expression correlated with poorer overall survival, with statistical significance noted in the full cohort and particularly in male patients. This study suggests that AR may promote metastatic NPC progression via the TTF-1/EGFR signaling pathway and interact with EBV to influence disease behavior, especially in males.
鼻咽癌(NPC)常见于东南亚,包括台湾。男性的发病率和死亡率都高于女性。然而,雄激素受体(AR)在鼻咽癌中的作用尚不清楚。在这项研究中,在大多数鼻咽癌细胞系和患者来源的异种移植物中检测到AR表达。在ar阳性模型中,使用enzalutamide(一种抗雄激素)治疗可显著抑制患者来源的异种移植物生长,并在与化疗联合使用时显示出附加的抗肿瘤作用。此外,enzalutamide治疗后的转录组分析显示缺氧诱导因子-1、类固醇激素和AR途径的激活,以及干扰素和肿瘤坏死因子途径的抑制。蛋白质分析进一步支持这些转录组变化。在AR过表达的NPC-B13细胞中,AR似乎调节甲状腺转录因子-1 (TTF-1,由NKX2-1基因编码)及其下游靶表皮生长因子受体(EGFR),从而促进癌细胞增殖。此外,染色质免疫沉淀提示AR可能直接结合NKX2-1启动子上调其mRNA表达。在AR过表达的情况下,eb病毒(Epstein-Barr virus, EBV)处于潜伏状态,并伴有裂解基因表达的抑制。此外,Epstein-Barr核抗原-1在鼻咽癌细胞系报告细胞试验中以剂量依赖的方式增强AR反应激活。在96例转移性鼻咽癌样本中,有35例(36.5%)存在AR表达,以男性为主(33/83,39.8%)。AR表达与较差的总生存率相关,在整个队列中,特别是在男性患者中,具有统计学意义。本研究表明,AR可能通过TTF-1/EGFR信号通路促进转移性鼻咽癌进展,并与EBV相互作用影响疾病行为,尤其是在男性中。
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引用次数: 0
Tumor derived adiponectin induces immunosuppressive macrophages in upper tract urothelial carcinoma 肿瘤源性脂联素在上尿路上皮癌中诱导免疫抑制巨噬细胞。
IF 5 2区 医学 Q2 Medicine Pub Date : 2026-02-01 Epub Date: 2026-01-06 DOI: 10.1016/j.tranon.2025.102599
Cheng-Huang Shen , PiChe Chen , Chia-Bin Chang , Chih-Chia Chang , Meilin Wang , Lien-Ping Chou , Ya-Yan Lai , Ming-Yang Lee , Shu-Fen Wu
Upper tract urothelial carcinoma (UTUC) is a rare urologic cancer that is more aggressive and has a poorer survival rate compared to bladder cancer. Previously, we linked the UTUC derived factors with tumor-infiltrating immune cells. Macrophages are considered the most abundant immune cell population within tumors and serve as key regulators of the tumor microenvironment. This study aimed to investigate their role in modulating immunosuppression in UTUC tumors. Our results indicated that UTUC patients had higher proportion of M2-type macrophages in the periphery, and that tumor-infiltrating M2 macrophages were inversely correlated with tumor-infiltrating T lymphocytes within UTUC tumors. The supernatants from UTUC tumor tissue, as well as the predominant factor adiponectin, caused upregulation of arginase-1 and CD206 expression in THP-1 differentiated macrophages. Furthermore, macrophages treated with supernatants from UTUC tumor tissue or adiponectin alone inhibited CD4 T cell and CD8 T cell proliferation, along with reduction of effective cytokines produced by T cells. These results suggest that macrophages modulated by adiponectin are associated with T cell suppression in the UTUC tumor microenvironment, highlighting a potential therapeutic target.
上尿路上皮癌(UTUC)是一种罕见的泌尿系统癌症,与膀胱癌相比更具侵袭性,生存率较低。之前,我们将UTUC衍生因子与肿瘤浸润性免疫细胞联系起来。巨噬细胞被认为是肿瘤中最丰富的免疫细胞群,是肿瘤微环境的关键调节因子。本研究旨在探讨它们在调节UTUC肿瘤免疫抑制中的作用。我们的研究结果表明,UTUC患者外周血中M2型巨噬细胞比例较高,且UTUC肿瘤内浸润性M2巨噬细胞与浸润性T淋巴细胞呈负相关。UTUC肿瘤组织上清液及优势因子脂联素引起THP-1分化巨噬细胞精氨酸酶-1和CD206表达上调。此外,用UTUC肿瘤组织上清液或脂联素单独处理巨噬细胞可抑制CD4 T细胞和CD8 T细胞的增殖,并减少T细胞产生的有效细胞因子。这些结果表明,脂联素调节的巨噬细胞与UTUC肿瘤微环境中的T细胞抑制有关,突出了一个潜在的治疗靶点。
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引用次数: 0
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Translational Oncology
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