首页 > 最新文献

Communications in Applied Mathematics and Computational Science最新文献

英文 中文
Application of a fourth-order accurate finite-volume method with adaptive refinement in space and time to multifluid plasma simulations 在多流体等离子体模拟中应用空间和时间自适应细化的四阶精确有限体积法
IF 2.1 3区 数学 Q1 MATHEMATICS, APPLIED Pub Date : 2024-08-28 DOI: 10.2140/camcos.2024.19.57
Scott Polak, Xinfeng Gao

A novel multifluid plasma model is developed, based on the finite-volume method, with a fourth-order accurate algorithm and solution-adaptive mesh refinement in space and time. Previously, the order of accuracy of the multifluid plasma model was verified and the solutions to common plasma test cases were demonstrated. In the present work, the multifluid plasma model is applied to solve complex test cases involving discontinuities and shocks. Discussion is thus focused on methods of numerical stabilization and strategies with adaptive mesh refinement. The results show improvements to solution stability and as much as an order of magnitude improvement in compute time due to adaptive mesh refinement.

以有限体积法为基础,利用四阶精确算法和空间与时间上的求解自适应网格细化,开发了一种新型多流体等离子体模型。在此之前,已经验证了多流体等离子体模型的精度阶次,并演示了常见等离子体测试案例的解决方案。在本研究中,多流体等离子体模型被应用于解决涉及不连续和冲击的复杂测试案例。因此,讨论的重点是数值稳定方法和自适应网格细化策略。结果表明,自适应网格细化提高了求解稳定性,计算时间缩短了一个数量级。
{"title":"Application of a fourth-order accurate finite-volume method with adaptive refinement in space and time to multifluid plasma simulations","authors":"Scott Polak, Xinfeng Gao","doi":"10.2140/camcos.2024.19.57","DOIUrl":"https://doi.org/10.2140/camcos.2024.19.57","url":null,"abstract":"<p>A novel multifluid plasma model is developed, based on the finite-volume method, with a fourth-order accurate algorithm and solution-adaptive mesh refinement in space and time. Previously, the order of accuracy of the multifluid plasma model was verified and the solutions to common plasma test cases were demonstrated. In the present work, the multifluid plasma model is applied to solve complex test cases involving discontinuities and shocks. Discussion is thus focused on methods of numerical stabilization and strategies with adaptive mesh refinement. The results show improvements to solution stability and as much as an order of magnitude improvement in compute time due to adaptive mesh refinement. </p>","PeriodicalId":49265,"journal":{"name":"Communications in Applied Mathematics and Computational Science","volume":"176 1","pages":""},"PeriodicalIF":2.1,"publicationDate":"2024-08-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142195656","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Bright-dark rogue wave transition in coupled AB system via the physics-informed neural networks method 通过物理信息神经网络方法实现耦合 AB 系统中的明暗流氓波转换
IF 2.1 3区 数学 Q1 MATHEMATICS, APPLIED Pub Date : 2024-06-17 DOI: 10.2140/camcos.2024.19.1
Shi-Lin Zhang, Min-Hua Wang, Yin-Chuan Zhao

Physics-informed neural networks (PINNs) can be used not only to predict the solutions of nonlinear partial differential equations, but also to discover the dynamic characteristics and phase transitions of rogue waves in nonlinear systems. Based on improved PINNs, we predict bright-dark one-soliton, two-soliton, two-soliton molecule and rogue wave solutions in a coupled AB system. We find that using only a small number of dynamic evolutionary rogue wave solutions as training data, we can find the phase transition boundary that can distinguish bright and dark rogue waves, and realize the mutual prediction between different rogue wave structures. The results show that the improved algorithm has high prediction accuracy, which provides a promising general technique for discovering and predicting new rogue structures in other parametric coupled systems.

物理信息神经网络(PINNs)不仅可用于预测非线性偏微分方程的解,还可用于发现非线性系统中无赖波的动态特征和相变。基于改进后的 PINNs,我们预测了耦合 AB 系统中的明暗单孑子、双孑子、双孑子分子和无赖波解。我们发现,只需使用少量动态演化无赖波解作为训练数据,就能找到区分明暗无赖波的相变边界,并实现不同无赖波结构之间的相互预测。结果表明,改进后的算法具有很高的预测精度,为在其他参数耦合系统中发现和预测新的流氓波结构提供了一种前景广阔的通用技术。
{"title":"Bright-dark rogue wave transition in coupled AB system via the physics-informed neural networks method","authors":"Shi-Lin Zhang, Min-Hua Wang, Yin-Chuan Zhao","doi":"10.2140/camcos.2024.19.1","DOIUrl":"https://doi.org/10.2140/camcos.2024.19.1","url":null,"abstract":"<p>Physics-informed neural networks (PINNs) can be used not only to predict the solutions of nonlinear partial differential equations, but also to discover the dynamic characteristics and phase transitions of rogue waves in nonlinear systems. Based on improved PINNs, we predict bright-dark one-soliton, two-soliton, two-soliton molecule and rogue wave solutions in a coupled AB system. We find that using only a small number of dynamic evolutionary rogue wave solutions as training data, we can find the phase transition boundary that can distinguish bright and dark rogue waves, and realize the mutual prediction between different rogue wave structures. The results show that the improved algorithm has high prediction accuracy, which provides a promising general technique for discovering and predicting new rogue structures in other parametric coupled systems. </p>","PeriodicalId":49265,"journal":{"name":"Communications in Applied Mathematics and Computational Science","volume":"44 1","pages":""},"PeriodicalIF":2.1,"publicationDate":"2024-06-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141507713","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Multiderivative time integration methods preserving nonlinear functionals via relaxation 通过松弛保留非线性函数的多因次时间积分法
IF 2.1 3区 数学 Q1 MATHEMATICS, APPLIED Pub Date : 2024-06-17 DOI: 10.2140/camcos.2024.19.27
Hendrik Ranocha, Jochen Schütz

We combine the recent relaxation approach with multiderivative Runge–Kutta methods to preserve conservation or dissipation of entropy functionals for ordinary and partial differential equations. Relaxation methods are minor modifications of explicit and implicit schemes, requiring only the solution of a single scalar equation per time step in addition to the baseline scheme. We demonstrate the robustness of the resulting methods for a range of test problems including the 3D compressible Euler equations. In particular, we point out improved error growth rates for certain entropy-conservative problems including nonlinear dispersive wave equations.

我们将最新的松弛方法与多阶 Runge-Kutta 方法相结合,以保持常微分方程和偏微分方程的熵函数守恒或耗散。松弛方法是对显式和隐式方案的微小修改,除了基线方案外,每个时间步只需要解决一个标量方程。我们在一系列测试问题(包括三维可压缩欧拉方程)中证明了由此产生的方法的稳健性。特别是,我们指出某些熵保守问题(包括非线性分散波方程)的误差增长率有所提高。
{"title":"Multiderivative time integration methods preserving nonlinear functionals via relaxation","authors":"Hendrik Ranocha, Jochen Schütz","doi":"10.2140/camcos.2024.19.27","DOIUrl":"https://doi.org/10.2140/camcos.2024.19.27","url":null,"abstract":"<p>We combine the recent relaxation approach with multiderivative Runge–Kutta methods to preserve conservation or dissipation of entropy functionals for ordinary and partial differential equations. Relaxation methods are minor modifications of explicit and implicit schemes, requiring only the solution of a single scalar equation per time step in addition to the baseline scheme. We demonstrate the robustness of the resulting methods for a range of test problems including the 3D compressible Euler equations. In particular, we point out improved error growth rates for certain entropy-conservative problems including nonlinear dispersive wave equations. </p>","PeriodicalId":49265,"journal":{"name":"Communications in Applied Mathematics and Computational Science","volume":"27 1","pages":""},"PeriodicalIF":2.1,"publicationDate":"2024-06-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141507714","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A parallel-in-time collocation method using diagonalization: theory and implementation for linear problems 使用对角化的并行实时配准法:线性问题的理论与实现
IF 2.1 3区 数学 Q1 MATHEMATICS, APPLIED Pub Date : 2023-12-21 DOI: 10.2140/camcos.2023.18.55
Gayatri Čaklović, Robert Speck, Martin Frank

We present and analyze a parallel implementation of a parallel-in-time collocation method based on α-circulant preconditioned Richardson iterations. While many papers explore this family of single-level, time-parallel “all-at-once” integrators from various perspectives, performance results of actual parallel runs are still scarce. This leaves a critical gap, because the efficiency and applicability of any parallel method heavily rely on the actual parallel performance, with only limited guidance from theoretical considerations. Further, challenges like selecting good parameters, finding suitable communication strategies, and performing a fair comparison to sequential time-stepping methods can be easily missed. In this paper, we first extend the original idea of these fixed point iterative approaches based on α-circulant preconditioners to high-order collocation methods, adding yet another level of parallelization in time “across the method”. We derive an adaptive strategy to select a new α-circulant preconditioner for each iteration during runtime for balancing convergence rates, round-off errors, and inexactness of inner system solves for the individual time-steps. After addressing these more theoretical challenges, we present an open-source space- and time-parallel implementation and evaluate its performance for two different test problems.

我们介绍并分析了一种基于 α 循环预处理理查森迭代法的并行实时配准方法的并行实施。尽管许多论文从不同角度探讨了这一系列单层次、时间并行的 "一次性 "积分器,但实际并行运行的性能结果仍然很少。这就留下了一个关键的空白,因为任何并行方法的效率和适用性都在很大程度上依赖于实际的并行性能,而理论上的指导作用非常有限。此外,选择好的参数、找到合适的通信策略以及与顺序时间步进方法进行公平比较等挑战也很容易被忽略。在本文中,我们首先将这些基于 α-环流前置条件器的定点迭代方法的原始思想扩展到高阶拼合方法,在时间上 "跨方法 "增加了另一个层次的并行化。我们推导出一种自适应策略,用于在运行期间为每次迭代选择新的α-环形预处理器,以平衡收敛率、舍入误差和各时间步内部系统求解的不精确性。在解决了这些理论上的难题后,我们提出了一个空间和时间并行的开源实现方案,并针对两个不同的测试问题对其性能进行了评估。
{"title":"A parallel-in-time collocation method using diagonalization: theory and implementation for linear problems","authors":"Gayatri Čaklović, Robert Speck, Martin Frank","doi":"10.2140/camcos.2023.18.55","DOIUrl":"https://doi.org/10.2140/camcos.2023.18.55","url":null,"abstract":"<p>We present and analyze a parallel implementation of a parallel-in-time collocation method based on <math display=\"inline\" xmlns=\"http://www.w3.org/1998/Math/MathML\"><mi>α</mi></math>-circulant preconditioned Richardson iterations. While many papers explore this family of single-level, time-parallel “all-at-once” integrators from various perspectives, performance results of actual parallel runs are still scarce. This leaves a critical gap, because the efficiency and applicability of any parallel method heavily rely on the actual parallel performance, with only limited guidance from theoretical considerations. Further, challenges like selecting good parameters, finding suitable communication strategies, and performing a fair comparison to sequential time-stepping methods can be easily missed. In this paper, we first extend the original idea of these fixed point iterative approaches based on <math display=\"inline\" xmlns=\"http://www.w3.org/1998/Math/MathML\"><mi>α</mi></math>-circulant preconditioners to high-order collocation methods, adding yet another level of parallelization in time “across the method”. We derive an adaptive strategy to select a new <math display=\"inline\" xmlns=\"http://www.w3.org/1998/Math/MathML\"><mi>α</mi></math>-circulant preconditioner for each iteration during runtime for balancing convergence rates, round-off errors, and inexactness of inner system solves for the individual time-steps. After addressing these more theoretical challenges, we present an open-source space- and time-parallel implementation and evaluate its performance for two different test problems. </p>","PeriodicalId":49265,"journal":{"name":"Communications in Applied Mathematics and Computational Science","volume":"31 1","pages":""},"PeriodicalIF":2.1,"publicationDate":"2023-12-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139027434","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Hopf bifurcation analysis of a phage therapy model 噬菌体疗法模型的霍普夫分岔分析
IF 2.1 3区 数学 Q1 MATHEMATICS, APPLIED Pub Date : 2023-12-21 DOI: 10.2140/camcos.2023.18.87
Ei Ei Kyaw, Hongchan Zheng, Jingjing Wang
{"title":"Hopf bifurcation analysis of a phage therapy model","authors":"Ei Ei Kyaw, Hongchan Zheng, Jingjing Wang","doi":"10.2140/camcos.2023.18.87","DOIUrl":"https://doi.org/10.2140/camcos.2023.18.87","url":null,"abstract":"","PeriodicalId":49265,"journal":{"name":"Communications in Applied Mathematics and Computational Science","volume":"59 41","pages":""},"PeriodicalIF":2.1,"publicationDate":"2023-12-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138949098","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A source term method for Poisson problems with a discontinuous diffusion coefficient 非连续扩散系数泊松问题的源项方法
IF 2.1 3区 数学 Q1 MATHEMATICS, APPLIED Pub Date : 2023-12-21 DOI: 10.2140/camcos.2023.18.153
John D. Towers
{"title":"A source term method for Poisson problems with a discontinuous diffusion coefficient","authors":"John D. Towers","doi":"10.2140/camcos.2023.18.153","DOIUrl":"https://doi.org/10.2140/camcos.2023.18.153","url":null,"abstract":"","PeriodicalId":49265,"journal":{"name":"Communications in Applied Mathematics and Computational Science","volume":"30 7","pages":""},"PeriodicalIF":2.1,"publicationDate":"2023-12-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138951721","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A numerical study of Landau damping with PETSc-PIC 利用 PETSc-PIC 对兰道阻尼进行数值研究
IF 2.1 3区 数学 Q1 MATHEMATICS, APPLIED Pub Date : 2023-12-21 DOI: 10.2140/camcos.2023.18.135
Daniel S. Finn, Matthew G. Knepley, Joseph V. Pusztay, Mark F. Adams

We present a study of the standard plasma physics test, Landau damping, using the particle-in-cell (PIC) algorithm. The Landau damping phenomenon consists of the damping of small oscillations in plasmas without collisions. In the PIC method, a hybrid discretization is constructed with a grid of finitely supported basis functions to represent the electric, magnetic and/or gravitational fields, and a distribution of delta functions to represent the particle field. Approximations to the dispersion relation are found to be inadequate in accurately calculating values for the electric field frequency and damping rate when parameters of the physical system, such as the plasma frequency or thermal velocity, are varied. We present a full derivation and numerical solution for the dispersion relation, and verify the PETSC-PIC numerical solutions to the Vlasov–Poisson system for a large range of wavenumbers and charge densities.

我们利用粒子入胞(PIC)算法对标准等离子体物理测试--朗道阻尼--进行了研究。朗道阻尼现象包括等离子体中没有碰撞的微小振荡的阻尼。在 PIC 方法中,使用有限支持的基函数网格构建混合离散,以表示电场、磁场和/或引力场,并使用三角函数分布表示粒子场。当物理系统的参数(如等离子体频率或热速度)发生变化时,我们发现分散关系的近似值不足以精确计算电场频率和阻尼率的值。我们提出了频散关系的完整推导和数值解,并验证了 PETSC-PIC 数值解在较大波数和电荷密度范围内的 Vlasov-Poisson 系统。
{"title":"A numerical study of Landau damping with PETSc-PIC","authors":"Daniel S. Finn, Matthew G. Knepley, Joseph V. Pusztay, Mark F. Adams","doi":"10.2140/camcos.2023.18.135","DOIUrl":"https://doi.org/10.2140/camcos.2023.18.135","url":null,"abstract":"<p>We present a study of the standard plasma physics test, Landau damping, using the particle-in-cell (PIC) algorithm. The Landau damping phenomenon consists of the damping of small oscillations in plasmas without collisions. In the PIC method, a hybrid discretization is constructed with a grid of finitely supported basis functions to represent the electric, magnetic and/or gravitational fields, and a distribution of delta functions to represent the particle field. Approximations to the dispersion relation are found to be inadequate in accurately calculating values for the electric field frequency and damping rate when parameters of the physical system, such as the plasma frequency or thermal velocity, are varied. We present a full derivation and numerical solution for the dispersion relation, and verify the PETSC-PIC numerical solutions to the Vlasov–Poisson system for a large range of wavenumbers and charge densities. </p>","PeriodicalId":49265,"journal":{"name":"Communications in Applied Mathematics and Computational Science","volume":"6 1","pages":""},"PeriodicalIF":2.1,"publicationDate":"2023-12-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139027404","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A comparative study of iterative Riemann solvers for the shallow water and Euler equations 浅水方程和欧拉方程的黎曼迭代求解器比较研究
IF 2.1 3区 数学 Q1 MATHEMATICS, APPLIED Pub Date : 2023-12-21 DOI: 10.2140/camcos.2023.18.107
Carlos Muñoz Moncayo, Manuel Quezada de Luna, David I. Ketcheson

We investigate the achievable efficiency of exact solvers for the Riemann problem for two systems of first-order hyperbolic PDEs: the shallow water equations and the Euler equations of compressible gas dynamics. Many approximate solvers have been developed for these systems; exact solution algorithms have received less attention because the computation of the exact solution typically requires an iterative solution of algebraic equations, which can be expensive or unreliable. We investigate a range of iterative algorithms and initial guesses. In addition to existing algorithms, we propose simple new algorithms that are guaranteed to converge and to remain in the range of physically admissible values at all iterations. We apply the existing and new iterative schemes to an ensemble of test Riemann problems. For the shallow water equations, we find that Newton’s method with a simple modification converges quickly and reliably. For the Euler equations we obtain similar results; however, when the required precision is high, a combination of Ostrowski and Newton iterations converges faster. These solvers are slower than standard approximate solvers like Roe and HLLE, but come within a factor of two in speed. We also provide a preliminary comparison of the accuracy of a finite volume discretization using an exact solver versus standard approximate solvers.

我们研究了两个一阶双曲 PDE 系统(浅水方程和可压缩气体动力学欧拉方程)的黎曼问题精确求解器的可实现效率。针对这些系统已经开发了许多近似求解器;精确求解算法受到的关注较少,因为精确解的计算通常需要代数方程的迭代求解,而迭代求解可能成本高昂或不可靠。我们研究了一系列迭代算法和初始猜测。除现有算法外,我们还提出了简单的新算法,这些算法可保证在所有迭代过程中收敛并保持在物理可容许值范围内。我们将现有的和新的迭代方案应用于一系列测试黎曼问题。对于浅水方程,我们发现牛顿方法经过简单修改后就能快速可靠地收敛。对于欧拉方程,我们得到了类似的结果;然而,当要求的精度较高时,奥斯特洛夫斯基和牛顿迭代法的组合收敛速度更快。这些求解器比标准近似求解器(如 Roe 和 HLLE)慢,但速度不超过 2 倍。我们还初步比较了使用精确求解器和标准近似求解器进行有限体积离散化的精度。
{"title":"A comparative study of iterative Riemann solvers for the shallow water and Euler equations","authors":"Carlos Muñoz Moncayo, Manuel Quezada de Luna, David I. Ketcheson","doi":"10.2140/camcos.2023.18.107","DOIUrl":"https://doi.org/10.2140/camcos.2023.18.107","url":null,"abstract":"<p>We investigate the achievable efficiency of exact solvers for the Riemann problem for two systems of first-order hyperbolic PDEs: the shallow water equations and the Euler equations of compressible gas dynamics. Many approximate solvers have been developed for these systems; exact solution algorithms have received less attention because the computation of the exact solution typically requires an iterative solution of algebraic equations, which can be expensive or unreliable. We investigate a range of iterative algorithms and initial guesses. In addition to existing algorithms, we propose simple new algorithms that are guaranteed to converge and to remain in the range of physically admissible values at all iterations. We apply the existing and new iterative schemes to an ensemble of test Riemann problems. For the shallow water equations, we find that Newton’s method with a simple modification converges quickly and reliably. For the Euler equations we obtain similar results; however, when the required precision is high, a combination of Ostrowski and Newton iterations converges faster. These solvers are slower than standard approximate solvers like Roe and HLLE, but come within a factor of two in speed. We also provide a preliminary comparison of the accuracy of a finite volume discretization using an exact solver versus standard approximate solvers. </p>","PeriodicalId":49265,"journal":{"name":"Communications in Applied Mathematics and Computational Science","volume":"19 1","pages":""},"PeriodicalIF":2.1,"publicationDate":"2023-12-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139027095","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A connected component labeling algorithm for implicitly defined domains 隐式定义域的连通构件标注算法
3区 数学 Q1 MATHEMATICS, APPLIED Pub Date : 2023-06-15 DOI: 10.2140/camcos.2023.18.29
Robert I. Saye
{"title":"A connected component labeling algorithm for implicitly defined domains","authors":"Robert I. Saye","doi":"10.2140/camcos.2023.18.29","DOIUrl":"https://doi.org/10.2140/camcos.2023.18.29","url":null,"abstract":"","PeriodicalId":49265,"journal":{"name":"Communications in Applied Mathematics and Computational Science","volume":"28 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-06-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"134981971","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Advanced stationary and nonstationary kernel designs for domain-aware Gaussian processes 领域感知高斯过程的高级平稳和非平稳核设计
IF 2.1 3区 数学 Q1 MATHEMATICS, APPLIED Pub Date : 2022-10-07 DOI: 10.2140/camcos.2022.17.131
Marcus M. Noack, James A. Sethian

Gaussian process regression is a widely applied method for function approximation and uncertainty quantification. The technique has recently gained popularity in the machine learning community due to its robustness and interpretability. The mathematical methods we discuss in this paper are an extension of the Gaussian process framework. We are proposing advanced kernel designs that only allow for functions with certain desirable characteristics to be elements of the reproducing kernel Hilbert space (RKHS) that underlies all kernel methods and serves as the sample space for Gaussian process regression. These desirable characteristics reflect the underlying physics; two obvious examples are symmetry and periodicity constraints. In addition, we want to draw attention to nonstationary kernel designs that can be defined in the same framework to yield flexible multitask Gaussian processes. We will show the impact of advanced kernel designs on Gaussian processes using several synthetic and two scientific data sets. The results show that informing a Gaussian process of domain knowledge, combined with additional flexibility and communicated through advanced kernel designs, has a significant impact on the accuracy and relevance of the function approximation.

高斯过程回归是一种应用广泛的函数逼近和不确定性量化方法。由于其鲁棒性和可解释性,该技术最近在机器学习社区中得到了普及。本文讨论的数学方法是高斯过程框架的一种扩展。我们提出了先进的核设计,只允许具有某些理想特征的函数成为再现核希尔伯特空间(RKHS)的元素,该空间是所有核方法的基础,并作为高斯过程回归的样本空间。这些理想的特性反映了潜在的物理特性;两个明显的例子是对称约束和周期性约束。此外,我们希望提请注意非平稳核设计,它可以在相同的框架中定义,以产生灵活的多任务高斯过程。我们将使用几个合成数据集和两个科学数据集来展示高级核设计对高斯过程的影响。结果表明,将领域知识告知高斯过程,结合额外的灵活性,并通过先进的核设计进行交流,对函数逼近的准确性和相关性有显著影响。
{"title":"Advanced stationary and nonstationary kernel designs for domain-aware Gaussian processes","authors":"Marcus M. Noack, James A. Sethian","doi":"10.2140/camcos.2022.17.131","DOIUrl":"https://doi.org/10.2140/camcos.2022.17.131","url":null,"abstract":"<p>Gaussian process regression is a widely applied method for function approximation and uncertainty quantification. The technique has recently gained popularity in the machine learning community due to its robustness and interpretability. The mathematical methods we discuss in this paper are an extension of the Gaussian process framework. We are proposing advanced kernel designs that only allow for functions with certain desirable characteristics to be elements of the reproducing kernel Hilbert space (RKHS) that underlies all kernel methods and serves as the sample space for Gaussian process regression. These desirable characteristics reflect the underlying physics; two obvious examples are symmetry and periodicity constraints. In addition, we want to draw attention to nonstationary kernel designs that can be defined in the same framework to yield flexible multitask Gaussian processes. We will show the impact of advanced kernel designs on Gaussian processes using several synthetic and two scientific data sets. The results show that informing a Gaussian process of domain knowledge, combined with additional flexibility and communicated through advanced kernel designs, has a significant impact on the accuracy and relevance of the function approximation. </p>","PeriodicalId":49265,"journal":{"name":"Communications in Applied Mathematics and Computational Science","volume":"51 1","pages":""},"PeriodicalIF":2.1,"publicationDate":"2022-10-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138524700","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 12
期刊
Communications in Applied Mathematics and Computational Science
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1