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Regulation of Cancer-Associated miRNAs Expression under Hypoxic Conditions 缺氧条件下癌症相关 miRNAs 的表达调控
IF 3.2 4区 医学 Q2 Medicine Pub Date : 2024-05-10 DOI: 10.1155/2024/5523283
Jesús Valencia-Cervantes, Martha Patricia Sierra-Vargas
Solid tumors frequently experience hypoxia or low O2 levels. In these conditions, hypoxia-inducible factor 1 alpha (HIF-1α) is activated and acts as a transcription factor that regulates cancer cell adaptation to O2 and nutrient deprivation. HIF-1α controls gene expression associated with various signaling pathways that promote cancer cell proliferation and survival. MicroRNAs (miRNAs) are 22-nucleotide noncoding RNAs that play a role in various biological processes essential for cancer progression. This review presents an overview of how hypoxia regulates the expression of multiple miRNAs in the progression of cancer cells.
实体瘤经常会出现缺氧或低氧水平。在这种情况下,低氧诱导因子 1α(HIF-1α)被激活,并作为一种转录因子调节癌细胞对氧气和营养匮乏的适应。HIF-1α 可控制与促进癌细胞增殖和存活的各种信号通路相关的基因表达。微小核糖核酸(miRNA)是 22 个核苷酸的非编码 RNA,在癌症进展所必需的各种生物过程中发挥作用。本综述概述了缺氧如何调控多种 miRNA 在癌细胞进展过程中的表达。
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引用次数: 0
Hsa_circ_0051908 Promotes Hepatocellular Carcinoma Progression by Regulating the Epithelial–Mesenchymal Transition Process Hsa_circ_0051908 通过调控上皮-间质转化过程促进肝细胞癌的进展
IF 3.2 4区 医学 Q2 Medicine Pub Date : 2024-04-30 DOI: 10.1155/2024/8645534
Yinbing Wu, Huafei Tang, Shuzhong Cui, Quanxing Liao, Lisi Zeng, Yinuo Tu
Background/Aims. Circular RNAs (circRNAs) are often used for tumor diagnosis and treatment owing to their high stability, high expression abundance, and strong tissue specificity. The role of hsa_circ_0051908, a newly reported circRNA, in the development of hepatocellular carcinoma (HCC) is unknown. Materials and Methods. Hsa_circ_0051908 expression was determined using RT-qPCR. HCC cell proliferation, apoptosis, invasion, and migration were assessed using CCK-8 assay, EdU staining, TUNEL staining, flow cytometry, and transwell assay. The molecular mechanism was analyzed using western blotting. In addition, the role of hsa_circ_0051908 in tumor growth was evaluated in vivo. Results. Hsa_circ_0051908 expression was increased in both HCC tissues and cell lines. The proliferation, migration, and invasion of HCC cells were significantly decreased after hsa_circ_0051908 knockdown, while cell apoptosis was notably increased. Furthermore, we found that hsa_circ_0051908 silencing downregulated vimentin and Snail and upregulated E-cadherin. In vivo, hsa_circ_0051908 silencing significantly inhibited the growth of the tumor. Conclusions. Our data provide evidence that hsa_circ_0051908 promotes HCC progression partially by mediating the epithelial–mesenchymal transition process, and it may be used for HCC treatment.
背景/目的。环状 RNA(circRNA)因其高稳定性、高表达丰度和强组织特异性,常被用于肿瘤的诊断和治疗。新报道的环状 RNA hsa_circ_0051908 在肝细胞癌(HCC)发病中的作用尚不清楚。材料与方法。使用 RT-qPCR 测定 Hsa_circ_0051908 的表达。使用 CCK-8 检测法、EdU 染色法、TUNEL 染色法、流式细胞术和透孔试验评估 HCC 细胞的增殖、凋亡、侵袭和迁移。分子机制的分析则采用了 Western 印迹技术。此外,还评估了 hsa_circ_0051908 在体内肿瘤生长中的作用。结果Hsa_circ_0051908 在 HCC 组织和细胞系中的表达均有所增加。敲除 hsa_circ_0051908 后,HCC 细胞的增殖、迁移和侵袭能力明显降低,而细胞凋亡能力显著增强。此外,我们还发现沉默 hsa_circ_0051908 会下调波形蛋白和 Snail,上调 E-cadherin。在体内,沉默 hsa_circ_0051908 能显著抑制肿瘤的生长。结论。我们的数据提供了证据,证明hsa_circ_0051908部分通过介导上皮-间质转化过程来促进HCC的进展,它可用于HCC的治疗。
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引用次数: 0
Mitochondria-Associated Gene SLC25A32 as a Novel Prognostic and Immunotherapy Biomarker: From Pan-Cancer Multiomics Analysis to Breast Cancer Validation 线粒体相关基因 SLC25A32 作为新型预后和免疫治疗生物标记物:从泛癌多组学分析到乳腺癌验证
IF 3.2 4区 医学 Q2 Medicine Pub Date : 2024-04-29 DOI: 10.1155/2024/1373659
Shiqi Zuo, Siyuan He, Zhiqin Zhu, Yingying Zhang, Yanjie Hou, Ziqing Wu, Yao Tang
Background. Mutations in SLC25A32 in humans cause late-onset exercise intolerance, which is associated with various neurological and metabolic diseases. However, its specific mechanism of action in tumour development is poorly understood owing to the lack of multiomics integrated analysis of SLC25A32 in pan-cancer. Methods. We used various analytical tools to comprehensively investigate the transcription, protein level, and promoter methylation of SLC25A32. Furthermore, the GSCA and cBioPortal databases were used to evaluate the inheritance impact and epigenetic alterations of SLC25A32 in pan-cancer. SLC25A32 expression and the prognostic significance of copy number alterations in multiple cancers were compared using the UCSCXenaShiny and GEPIA2.0 platforms, and its specific function in breast cancer was experimentally verified. Results. SLC25A32 is abnormally expressed at the transcriptional and protein levels in most cancer types, with aberrant DNA promoter methylation and significant gene amplification in most tumours. SLC25A32 is significantly associated with the survival prognosis of some cancers, immune infiltrating cells, tumour stemness, and immune-related markers. SLC25A32 knockdown decreased breast tumour cell proliferation, invasion, and metastasis. Conclusions. This study aimed to reveal SLC25A32 as a novel prognostic biomarker for pan-cancer prediction and immunotherapy efficacy and specifically describes its underlying mechanism of action in breast cancer. SLC25A32 is widely differentially expressed in pan-cancer with prognostic significance and is correlated with immune infiltration. Additionally, it can affect breast cancer occurrence and development.
背景。人类 SLC25A32 基因突变会导致迟发性运动不耐受,并与多种神经和代谢疾病相关。然而,由于缺乏对泛癌症中 SLC25A32 的多组学综合分析,人们对其在肿瘤发生中的具体作用机制知之甚少。方法。我们使用多种分析工具全面研究了 SLC25A32 的转录、蛋白水平和启动子甲基化。此外,我们还利用 GSCA 和 cBioPortal 数据库评估了 SLC25A32 在泛癌症中的遗传影响和表观遗传学改变。利用UCSCXenaShiny和GEPIA2.0平台比较了SLC25A32在多种癌症中的表达和拷贝数改变的预后意义,并通过实验验证了它在乳腺癌中的特异功能。结果发现在大多数癌症类型中,SLC25A32在转录和蛋白水平上异常表达,在大多数肿瘤中DNA启动子甲基化异常,基因显著扩增。SLC25A32 与某些癌症的生存预后、免疫浸润细胞、肿瘤干性和免疫相关标记物有明显关联。敲除 SLC25A32 可减少乳腺肿瘤细胞的增殖、侵袭和转移。结论这项研究旨在揭示 SLC25A32 作为一种新型预后生物标记物对泛癌症预测和免疫疗法疗效的作用,并具体描述了它在乳腺癌中的潜在作用机制。SLC25A32在泛癌症中广泛差异表达,具有预后意义,并与免疫浸润相关。此外,它还会影响乳腺癌的发生和发展。
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引用次数: 0
Downregulated PDIA3P1 lncRNA Impairs Trophoblast Phenotype by Regulating Snail and SFRP1 in PE 下调的PDIA3P1 lncRNA通过调控PE中的蜗牛和SFRP1损害滋养层细胞表型
IF 3.2 4区 医学 Q2 Medicine Pub Date : 2024-04-27 DOI: 10.1155/2024/8972022
Zhengzheng Ding, Liuxin Wu, Yue Sun, Yuanyuan Zhu, Qing Zuo, Li Yuan, Cong Wang, Lizhou Sun, Yetao Xu, Yuanyuan Zhang
Preeclampsia (PE) manifests as a pregnancy-specific complication arising from compromised placentation characterized by inadequate trophoblast invasion. A growing body of evidence underscores the pivotal involvement of pseudogenes, a subset of long noncoding RNAs, in the pathological processes of PE. This study presents a novel finding, demonstrating a significant downregulation of the pseudogene PDIA3P1 in PE placental tissues compared to normal tissues. In vitro functional assays revealed that suppressing PDIA3P1 hindered trophoblast proliferation, invasion, and migration, concurrently upregulating the expression of secreted frizzled-related protein 1 (SFRP1). Further exploration of the regulatory role of PDIA3P1 in PE, utilizing human trophoblasts, established that PDIA3P1 exerts its function by binding to HuR, thereby enhancing the stability of Snail expression in trophoblasts. Overall, our findings suggest a crucial role for PDIA3P1 in regulating trophoblast properties and contributing to the pathogenesis of PE, offering potential targets for prognosis and therapeutic intervention.
子痫前期(PE)是一种妊娠期特有的并发症,由滋养细胞侵袭不足导致胎盘功能受损引起。越来越多的证据表明,假基因(长非编码 RNA 的一个子集)在子痫前期的病理过程中起着关键作用。本研究提出了一个新发现,即与正常组织相比,PE 胎盘组织中的假基因 PDIA3P1 明显下调。体外功能测试显示,抑制 PDIA3P1 会阻碍滋养细胞的增殖、侵袭和迁移,同时上调分泌型皱纹相关蛋白 1(SFRP1)的表达。利用人体滋养细胞进一步探讨了 PDIA3P1 在 PE 中的调控作用,结果发现 PDIA3P1 通过与 HuR 结合发挥其功能,从而增强了滋养细胞中 Snail 表达的稳定性。总之,我们的研究结果表明,PDIA3P1 在调节滋养细胞特性和促进 PE 发病机制方面起着至关重要的作用,为预后和治疗干预提供了潜在的靶点。
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引用次数: 0
Phospholipase D, a Novel Therapeutic Target Contributes to the Pathogenesis of Neurodegenerative and Neuroimmune Diseases 磷脂酶 D--一种新的治疗靶点--有助于神经退行性疾病和神经免疫疾病的发病机制
IF 3.2 4区 医学 Q2 Medicine Pub Date : 2024-03-07 DOI: 10.1155/2024/6681911
Weiwei Zhang, Feiqi Zhu, Jie Zhu, Kangding Liu
Phospholipase D (PLD) is an enzyme that consists of six isoforms (PLD1–PLD6) and has been discovered in different organisms including bacteria, viruses, plants, and mammals. PLD is involved in regulating a wide range of nerve cells’ physiological processes, such as cytoskeleton modulation, proliferation/growth, vesicle trafficking, morphogenesis, and development. Simultaneously, PLD, which also plays an essential role in the pathogenesis of neurodegenerative and neuroimmune diseases. In this review, family members, characterizations, structure, functions and related signaling pathways, and therapeutic values of PLD was summarized, then five representative diseases including Alzheimer disease (AD), Parkinson’s disease (PD), etc. were selected as examples to tell the involvement of PLD in these neurological diseases. Notably, recent advances in the development of tools for studying PLD therapy envisaged novel therapeutic interventions. Furthermore, the limitations of PLD based therapy were also analyzed and discussed. The content of this review provided a thorough and reasonable basis for further studies to exploit the potential of PLD in the treatment of neurodegenerative and neuroimmune diseases.
磷脂酶 D(PLD)是一种由六种同工酶(PLD1-PLD6)组成的酶,已在细菌、病毒、植物和哺乳动物等不同生物体中被发现。PLD 参与调节神经细胞的多种生理过程,如细胞骨架调节、增殖/生长、囊泡贩运、形态发生和发育。同时,PLD 在神经退行性疾病和神经免疫疾病的发病机制中也发挥着重要作用。本综述总结了 PLD 的家族成员、特征、结构、功能和相关信号通路以及治疗价值,并以阿尔茨海默病(AD)、帕金森病(PD)等五种代表性疾病为例,阐述了 PLD 在这些神经系统疾病中的参与作用。值得注意的是,最近在开发 PLD 治疗研究工具方面取得的进展设想了新的治疗干预措施。此外,还分析和讨论了基于 PLD 疗法的局限性。本综述的内容为进一步研究开发 PLD 在治疗神经退行性疾病和神经免疫疾病中的潜力提供了全面合理的依据。
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引用次数: 0
miR-224-5p Attenuates Allergic Responses in Mice with Allergic Rhinitis by Modulating the Th1/Th2 Response miR-224-5p 通过调节 Th1/Th2 反应减轻过敏性鼻炎小鼠的过敏反应
IF 3.2 4区 医学 Q2 Medicine Pub Date : 2024-02-29 DOI: 10.1155/2024/5531970
Yuxiao Li, Ran An, Mingjin Wu, Jiayan He, Xiaoguang He
Background. Allergic rhinitis (AR) is a common chronic respiratory disease that has become a global health problem. miRNAs play an important role in multiple immune and inflammatory diseases, including AR. In this work, the mechanism by which miR-224-5p regulates AR in vivo and in vitro was examined. Methods. Human nasal epithelial cells (HNEpCs) were used to establish an AR cell model induced by Der P1, and C57BL/6 mice were used to establish an AR animal model induced by OVA (ovalbumin). RT-qPCR was used to determine the level of miR-224-5p; western blot analysis was used to determine GATA3; ELISA was used to determine the levels of OVA-specific IgE, IFN-γ, IL-4, IL-5, and IL-13; flow cytometry was used to determine the differentiation of Th1 and Th2 cells; and HE and PAS staining was used to observe the histopathological alterations in the mouse nasal mucosa and spleen. Results. miR-224-5p was downregulated in nasal mucosa from mice with AR and an AR cell model. Overexpressed miR-224-5p can improve AR development and attenuate AR symptoms by regulating GATA3-mediated Th1/Th2 responses. Conclusion. miR-224-5p attenuates allergic reactions in mice with AR by regulating the Th1/Th2 response.
背景。过敏性鼻炎(AR)是一种常见的慢性呼吸道疾病,已成为一个全球性的健康问题。miRNA 在多种免疫和炎症性疾病(包括 AR)中发挥着重要作用。本研究探讨了 miR-224-5p 在体内和体外调控 AR 的机制。研究方法用人鼻上皮细胞(HNEpCs)建立由 Der P1 诱导的 AR 细胞模型,用 C57BL/6 小鼠建立由 OVA(卵清蛋白)诱导的 AR 动物模型。利用 RT-qPCR 测定 miR-224-5p;利用 Western 印迹分析测定 GATA3;利用 ELISA 测定 OVA 特异性 IgE、IFN-γ、IL-4、IL-5 和 IL-13 的水平;利用流式细胞术测定 Th1 和 Th2 细胞的分化;利用 HE 和 PAS 染色观察小鼠鼻黏膜和脾脏的组织病理学改变。结果发现,miR-224-5p在AR小鼠和AR细胞模型的鼻黏膜中下调。过表达的 miR-224-5p 可通过调节 GATA3 介导的 Th1/Th2 反应改善 AR 的发展并减轻 AR 的症状。通过调节 Th1/Th2 反应,miR-224-5p 可减轻 AR 小鼠的过敏反应。
{"title":"miR-224-5p Attenuates Allergic Responses in Mice with Allergic Rhinitis by Modulating the Th1/Th2 Response","authors":"Yuxiao Li, Ran An, Mingjin Wu, Jiayan He, Xiaoguang He","doi":"10.1155/2024/5531970","DOIUrl":"https://doi.org/10.1155/2024/5531970","url":null,"abstract":"<i>Background</i>. Allergic rhinitis (AR) is a common chronic respiratory disease that has become a global health problem. miRNAs play an important role in multiple immune and inflammatory diseases, including AR. In this work, the mechanism by which miR-224-5p regulates AR in vivo and in vitro was examined. <i>Methods</i>. Human nasal epithelial cells (HNEpCs) were used to establish an AR cell model induced by Der P1, and C57BL/6 mice were used to establish an AR animal model induced by OVA (ovalbumin). RT-qPCR was used to determine the level of miR-224-5p; western blot analysis was used to determine GATA3; ELISA was used to determine the levels of OVA-specific IgE, IFN-<i>γ</i>, IL-4, IL-5, and IL-13; flow cytometry was used to determine the differentiation of Th1 and Th2 cells; and HE and PAS staining was used to observe the histopathological alterations in the mouse nasal mucosa and spleen. <i>Results</i>. miR-224-5p was downregulated in nasal mucosa from mice with AR and an AR cell model. Overexpressed miR-224-5p can improve AR development and attenuate AR symptoms by regulating GATA3-mediated Th1/Th2 responses. <i>Conclusion</i>. miR-224-5p attenuates allergic reactions in mice with AR by regulating the Th1/Th2 response.","PeriodicalId":49326,"journal":{"name":"Analytical Cellular Pathology","volume":null,"pages":null},"PeriodicalIF":3.2,"publicationDate":"2024-02-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140001535","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Hsa_circ_0000190 Promotes NSCLC Cell Resistance to Cisplatin via the Modulation of the miR-1253/IL-6 Axis Hsa_circ_0000190通过调控miR-1253/IL-6轴促进NSCLC细胞对顺铂的抗性
IF 3.2 4区 医学 Q2 Medicine Pub Date : 2024-02-26 DOI: 10.1155/2024/6647810
Hua He, Tian Li
Background. This study explored the mechanistic basis for nonsmall cell lung cancer (NSCLC) cisplatin (DDP) treatment resistance in an effort to define effective approaches to abrogating the emergence of such chemoresistance. Methods. Analyses of NSCLC expression of hsa_circ_0000190, miR-1253, and interleukin 6 (IL-6) were conducted via a quantitative real-time polymerase chain reaction (qPCR) approach, while the ability of these tumor cells to resist DDP treatment was evaluated with a CCK-8 assay. Interactions between different RNA molecules were assessed using both RNA immunoprecipitation and dual-luciferase reporter assays. Results. NSCLC cell lines and tissues resistant to DDP were found to express higher levels of hsa_circ_0000190, and knocking down this circRNA in NSCLC cells was associated with greater sensitivity to DDP exposure. Further research identified miR-1253 as a hsa_circ_0000190 target, with the ability of hsa_circ_0000190 knockdown to restore DDP sensitivity being largely attributable to the ability of this circRNA to suppress miR-1253 activity. IL-6 was identified as a major miR-1253 target in this context, with miR-1253 regulating chemoresistance in NSCLC cells in part by preventing IL-6 upregulation. Conclusion. Together, these data suggest that hsa_circ_0000190 can promote DDP chemoresistance in NSCLC cells through its ability to modulate miR-1253/IL-6 axis activity, highlighting a novel pathway that can be targeted in an effort to guide the more effective diagnosis and management of DDP-resistant tumors.
研究背景本研究探讨了非小细胞肺癌(NSCLC)顺铂(DDP)治疗耐药性的机理基础,以确定消除这种化疗耐药性的有效方法。研究方法通过定量实时聚合酶链式反应(qPCR)方法分析了NSCLC中hsa_circ_0000190、miR-1253和白细胞介素6(IL-6)的表达情况,同时用CCK-8检测法评估了这些肿瘤细胞抵抗DDP治疗的能力。利用 RNA 免疫沉淀和双荧光素酶报告实验评估了不同 RNA 分子之间的相互作用。结果研究发现,对DDP具有抗性的NSCLC细胞系和组织表达较高水平的hsa_circ_0000190,在NSCLC细胞中敲除这种circRNA与对DDP暴露更敏感有关。进一步的研究发现,miR-1253 是 hsa_circ_0000190 的靶点,敲除 hsa_circ_0000190 能够恢复对 DDP 的敏感性主要归因于这种 circRNA 能够抑制 miR-1253 的活性。在这种情况下,IL-6 被确定为 miR-1253 的一个主要靶点,miR-1253 部分通过阻止 IL-6 上调来调节 NSCLC 细胞的化疗耐药性。结论这些数据共同表明,hsa_circ_0000190能通过调节miR-1253/IL-6轴活性来促进NSCLC细胞的DDP化疗耐药性,突出了一种可作为靶点的新型途径,从而指导更有效地诊断和治疗DDP耐药性肿瘤。
{"title":"Hsa_circ_0000190 Promotes NSCLC Cell Resistance to Cisplatin via the Modulation of the miR-1253/IL-6 Axis","authors":"Hua He, Tian Li","doi":"10.1155/2024/6647810","DOIUrl":"https://doi.org/10.1155/2024/6647810","url":null,"abstract":"<i>Background</i>. This study explored the mechanistic basis for nonsmall cell lung cancer (NSCLC) cisplatin (DDP) treatment resistance in an effort to define effective approaches to abrogating the emergence of such chemoresistance. <i>Methods</i>. Analyses of NSCLC expression of hsa_circ_0000190, miR-1253, and interleukin 6 (IL-6) were conducted via a quantitative real-time polymerase chain reaction (qPCR) approach, while the ability of these tumor cells to resist DDP treatment was evaluated with a CCK-8 assay. Interactions between different RNA molecules were assessed using both RNA immunoprecipitation and dual-luciferase reporter assays. <i>Results</i>. NSCLC cell lines and tissues resistant to DDP were found to express higher levels of hsa_circ_0000190, and knocking down this circRNA in NSCLC cells was associated with greater sensitivity to DDP exposure. Further research identified miR-1253 as a hsa_circ_0000190 target, with the ability of hsa_circ_0000190 knockdown to restore DDP sensitivity being largely attributable to the ability of this circRNA to suppress miR-1253 activity. IL-6 was identified as a major miR-1253 target in this context, with miR-1253 regulating chemoresistance in NSCLC cells in part by preventing IL-6 upregulation. <i>Conclusion</i>. Together, these data suggest that hsa_circ_0000190 can promote DDP chemoresistance in NSCLC cells through its ability to modulate miR-1253/IL-6 axis activity, highlighting a novel pathway that can be targeted in an effort to guide the more effective diagnosis and management of DDP-resistant tumors.","PeriodicalId":49326,"journal":{"name":"Analytical Cellular Pathology","volume":null,"pages":null},"PeriodicalIF":3.2,"publicationDate":"2024-02-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139968267","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Identification of a Novel Prognostic Lymphangiogenesis-Related Signature Associated with Tumor Immunity for Guiding Therapy in Lung Adenocarcinoma 鉴定与肿瘤免疫相关的新型淋巴管生成预后特征,为肺腺癌治疗提供指导
IF 3.2 4区 医学 Q2 Medicine Pub Date : 2024-02-17 DOI: 10.1155/2024/2090450
Juan Peng, Dan Liu, Hong-feng Zhang, Qi-hao Hu, Wen Chen, Juan Zou, Juan Zhang, Hui Li, An-bo Gao, Yu-kun Li
Lymphangiogenesis, an integral contributor to lymphatic metastasis, is a significant reason for the poor prognosis of cancer patients. Anti-lymphangiogenesis treatment is a promising novel therapeutic direction, especially for tumors resistant to conventional therapies. We confirmed the ectopic expression of lymphangiogenesis-related genes (LRGs) in lung adenocarcinoma (LUAD) cohorts based on the TCGA database. We constructed a prediction signature with 15 LRG prognostic signatures (F2RL1, LOXL2, MKI67, PTPRM, GPI, POSTN, INHA, LDHA, LINC00857, ITGA2, PECAM1, SOD3, GDF15, SIX1, and FGD5), and the overall survival (OS) was significantly different between the high- and low-risk groups (TCGA-training: , TCGA-test: , GSE30219:
淋巴管生成是导致淋巴转移的一个重要因素,也是癌症患者预后不良的一个重要原因。抗淋巴管生成治疗是一个很有前景的新治疗方向,尤其是对传统疗法耐药的肿瘤。我们基于 TCGA 数据库确认了肺腺癌(LUAD)队列中淋巴管生成相关基因(LRGs)的异位表达。我们用15个LRG预后特征(F2RL1、LOXL2、MKI67、PTPRM、GPI、POSTN、INHA、LDHA、LINC00857、ITGA2、PECAM1、SOD3、GDF15、SIX1和FGD5)构建了一个预测特征,高危组和低危组的总生存期(OS)有显著差异(TCGA-training:GSE30219:、GSE37745:和 GSE50081:)。此外,风险评分还与 PIK3CA 和 BRCA1 通路相关。在提名图中,风险评分对OS的预后预测效果优于年龄、性别、分期、T期、N期和M期等临床病理参数。总之,我们构建并验证了15-LRG特征,它可能有助于预测LUAD的预后,并为未来下游分子机制的研究提供了可能的方向。
{"title":"Identification of a Novel Prognostic Lymphangiogenesis-Related Signature Associated with Tumor Immunity for Guiding Therapy in Lung Adenocarcinoma","authors":"Juan Peng, Dan Liu, Hong-feng Zhang, Qi-hao Hu, Wen Chen, Juan Zou, Juan Zhang, Hui Li, An-bo Gao, Yu-kun Li","doi":"10.1155/2024/2090450","DOIUrl":"https://doi.org/10.1155/2024/2090450","url":null,"abstract":"Lymphangiogenesis, an integral contributor to lymphatic metastasis, is a significant reason for the poor prognosis of cancer patients. Anti-lymphangiogenesis treatment is a promising novel therapeutic direction, especially for tumors resistant to conventional therapies. We confirmed the ectopic expression of lymphangiogenesis-related genes (LRGs) in lung adenocarcinoma (LUAD) cohorts based on the TCGA database. We constructed a prediction signature with 15 LRG prognostic signatures (F2RL1, LOXL2, MKI67, PTPRM, GPI, POSTN, INHA, LDHA, LINC00857, ITGA2, PECAM1, SOD3, GDF15, SIX1, and FGD5), and the overall survival (OS) was significantly different between the high- and low-risk groups (TCGA-training: <span><svg height=\"11.7782pt\" style=\"vertical-align:-3.42938pt\" version=\"1.1\" viewbox=\"-0.0498162 -8.34882 18.973 11.7782\" width=\"18.973pt\" xmlns=\"http://www.w3.org/2000/svg\" xmlns:xlink=\"http://www.w3.org/1999/xlink\"><g transform=\"matrix(.013,0,0,-0.013,0,0)\"></path></g><g transform=\"matrix(.013,0,0,-0.013,11.342,0)\"></path></g></svg><span></span><span><svg height=\"11.7782pt\" style=\"vertical-align:-3.42938pt\" version=\"1.1\" viewbox=\"22.555183800000002 -8.34882 28.184 11.7782\" width=\"28.184pt\" xmlns=\"http://www.w3.org/2000/svg\" xmlns:xlink=\"http://www.w3.org/1999/xlink\"><g transform=\"matrix(.013,0,0,-0.013,22.605,0)\"></path></g><g transform=\"matrix(.013,0,0,-0.013,28.845,0)\"></path></g><g transform=\"matrix(.013,0,0,-0.013,31.809,0)\"><use xlink:href=\"#g113-49\"></use></g><g transform=\"matrix(.013,0,0,-0.013,38.049,0)\"><use xlink:href=\"#g113-49\"></use></g><g transform=\"matrix(.013,0,0,-0.013,44.289,0)\"></path></g></svg>,</span></span> TCGA-test: <span><svg height=\"11.7782pt\" style=\"vertical-align:-3.42938pt\" version=\"1.1\" viewbox=\"-0.0498162 -8.34882 18.973 11.7782\" width=\"18.973pt\" xmlns=\"http://www.w3.org/2000/svg\" xmlns:xlink=\"http://www.w3.org/1999/xlink\"><g transform=\"matrix(.013,0,0,-0.013,0,0)\"><use xlink:href=\"#g113-113\"></use></g><g transform=\"matrix(.013,0,0,-0.013,11.342,0)\"></path></g></svg><span></span><span><svg height=\"11.7782pt\" style=\"vertical-align:-3.42938pt\" version=\"1.1\" viewbox=\"22.555183800000002 -8.34882 21.921 11.7782\" width=\"21.921pt\" xmlns=\"http://www.w3.org/2000/svg\" xmlns:xlink=\"http://www.w3.org/1999/xlink\"><g transform=\"matrix(.013,0,0,-0.013,22.605,0)\"><use xlink:href=\"#g113-49\"></use></g><g transform=\"matrix(.013,0,0,-0.013,28.845,0)\"><use xlink:href=\"#g113-47\"></use></g><g transform=\"matrix(.013,0,0,-0.013,31.809,0)\"><use xlink:href=\"#g113-49\"></use></g><g transform=\"matrix(.013,0,0,-0.013,38.049,0)\"></path></g></svg>,</span></span> GSE30219: <span><svg height=\"11.7782pt\" style=\"vertical-align:-3.42938pt\" version=\"1.1\" viewbox=\"-0.0498162 -8.34882 18.973 11.7782\" width=\"18.973pt\" xmlns=\"http://www.w3.org/2000/svg\" xmlns:xlink=\"http://www.w3.org/1999/xlink\"><g transform=\"matrix(.013,0,0,-0.013,0,0)\"><use xlink:href=\"#g113-113\"></use></g><g transform=\"matrix(.013,0,0,-0.013,11.342,0)\"><use xlink:href=\"#g117-91\"></use></g></s","PeriodicalId":49326,"journal":{"name":"Analytical Cellular Pathology","volume":null,"pages":null},"PeriodicalIF":3.2,"publicationDate":"2024-02-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139768145","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Astragaloside IV Protects against Shear Stress-Induced Glycocalyx Damage and Alleviates Abdominal Aortic Aneurysm by Regulating miR-17-3p/Syndecan-1 黄芪皂苷 IV 通过调节 miR-17-3p/Syndecan-1 保护剪切应力诱导的糖萼损伤并缓解腹主动脉瘤
IF 3.2 4区 医学 Q2 Medicine Pub Date : 2024-02-13 DOI: 10.1155/2024/2348336
Guojian Li, Qionghui Yang, Kaikai Luo, Ankou Xu, Lijuan Hou, Zhaoxiang Li, Lingjuan Du
Background. The present study aimed to analyze the impact of astragaloside IV (AS-IV) on abdominal aortic aneurysm (AAA) and the glycocalyx, elucidating the potential mechanism of AS-IV. Methods. Rat models of AAA were established using porcine pancreatic elastase. The effects of intraperitoneal AS-IV injection on the morphology, diameter, and glycocalyx of the aorta and the expression of miR-17-3p and Syndecan-1 (SDC1) protein were examined. Differentially expressed miRNAs from peripheral blood samples of healthy individuals, untreated patients with AAA, and treated patients with AAA were identified through sequencing. The relationship between miR-17-3p and SDC1 was validated using a dual-luciferase reporter assay. In vitro, shear stress was induced in human aortic endothelial cells (HAECs) to simulate AAA. Overexpression of miR-17-3p was performed to assess the effects of AS-IV on miR-17-3p and SDC1 expressions, apoptosis, and glycocalyx in HAECs. Results. AS-IV mitigated aortic damage in AAA rats, reducing the aortic diameter and alleviating glycocalyx damage. In addition, it suppressed the increase in miR-17-3p expression and promoted SDC1 expression in AAA rats. Peripheral blood miR-17-3p levels were significantly higher in patients with AAA than in healthy individuals. miR-17-3p inhibited the SDC1 protein expression in HAECs. In the in vitro AAA environment, miR-17-3p was upregulated and SDC1 was downregulated in HAECs. AS-IV inhibited miR-17-3p expression, promoted SDC1 expression, and mitigated shear stress-induced apoptosis and glycocalyx damage in HAECs. Overexpression of miR-17-3p blocked AS-IV–induced SDC1 expression promotion, glycocalyx protection, and apoptosis suppression in HAECs. Conclusion. miR-17-3p may damage the glycocalyx of aortic endothelial cells by targeting SDC1. AS-IV may promote SDC1 expression by inhibiting miR-17-3p, thereby protecting the glycocalyx and alleviating AAA.
背景。本研究旨在分析黄芪甲苷 IV(AS-IV)对腹主动脉瘤(AAA)和糖萼的影响,阐明 AS-IV 的潜在机制。方法。使用猪胰弹性蛋白酶建立 AAA 大鼠模型。腹腔注射 AS-IV 对大鼠主动脉的形态、直径、糖萼以及 miR-17-3p 和 Syndecan-1 (SDC1) 蛋白表达的影响。通过测序鉴定了健康人、未接受治疗的 AAA 患者和接受治疗的 AAA 患者外周血样本中差异表达的 miRNA。利用双荧光素酶报告实验验证了 miR-17-3p 与 SDC1 之间的关系。在体外,在人主动脉内皮细胞(HAECs)中诱导剪切应力以模拟 AAA。过表达 miR-17-3p 以评估 AS-IV 对 HAECs 中 miR-17-3p 和 SDC1 表达、细胞凋亡以及糖萼的影响。结果显示AS-IV 可减轻 AAA 大鼠的主动脉损伤,缩小主动脉直径并减轻糖萼的损伤。此外,AS-IV 还抑制了 AAA 大鼠体内 miR-17-3p 表达的增加,促进了 SDC1 的表达。miR-17-3p 可抑制 HAECs 中 SDC1 蛋白的表达。在体外 AAA 环境中,miR-17-3p 在 HAECs 中上调,而 SDC1 则下调。AS-IV抑制了miR-17-3p的表达,促进了SDC1的表达,减轻了剪切应力诱导的HAECs细胞凋亡和糖萼损伤。过表达 miR-17-3p 会阻断 AS-IV 在 HAECs 中诱导的 SDC1 表达促进、糖萼保护和凋亡抑制。结论:miR-17-3p 可通过靶向 SDC1 破坏主动脉内皮细胞的糖萼。AS-IV 可通过抑制 miR-17-3p 促进 SDC1 的表达,从而保护糖萼并缓解 AAA。
{"title":"Astragaloside IV Protects against Shear Stress-Induced Glycocalyx Damage and Alleviates Abdominal Aortic Aneurysm by Regulating miR-17-3p/Syndecan-1","authors":"Guojian Li, Qionghui Yang, Kaikai Luo, Ankou Xu, Lijuan Hou, Zhaoxiang Li, Lingjuan Du","doi":"10.1155/2024/2348336","DOIUrl":"https://doi.org/10.1155/2024/2348336","url":null,"abstract":"<i>Background</i>. The present study aimed to analyze the impact of astragaloside IV (AS-IV) on abdominal aortic aneurysm (AAA) and the glycocalyx, elucidating the potential mechanism of AS-IV. <i>Methods</i>. Rat models of AAA were established using porcine pancreatic elastase. The effects of intraperitoneal AS-IV injection on the morphology, diameter, and glycocalyx of the aorta and the expression of miR-17-3p and Syndecan-1 (SDC1) protein were examined. Differentially expressed miRNAs from peripheral blood samples of healthy individuals, untreated patients with AAA, and treated patients with AAA were identified through sequencing. The relationship between miR-17-3p and SDC1 was validated using a dual-luciferase reporter assay. In vitro, shear stress was induced in human aortic endothelial cells (HAECs) to simulate AAA. Overexpression of miR-17-3p was performed to assess the effects of AS-IV on miR-17-3p and SDC1 expressions, apoptosis, and glycocalyx in HAECs. <i>Results</i>. AS-IV mitigated aortic damage in AAA rats, reducing the aortic diameter and alleviating glycocalyx damage. In addition, it suppressed the increase in miR-17-3p expression and promoted SDC1 expression in AAA rats. Peripheral blood miR-17-3p levels were significantly higher in patients with AAA than in healthy individuals. miR-17-3p inhibited the SDC1 protein expression in HAECs. In the in vitro AAA environment, miR-17-3p was upregulated and SDC1 was downregulated in HAECs. AS-IV inhibited miR-17-3p expression, promoted SDC1 expression, and mitigated shear stress-induced apoptosis and glycocalyx damage in HAECs. Overexpression of miR-17-3p blocked AS-IV–induced SDC1 expression promotion, glycocalyx protection, and apoptosis suppression in HAECs. <i>Conclusion</i>. miR-17-3p may damage the glycocalyx of aortic endothelial cells by targeting SDC1. AS-IV may promote SDC1 expression by inhibiting miR-17-3p, thereby protecting the glycocalyx and alleviating AAA.","PeriodicalId":49326,"journal":{"name":"Analytical Cellular Pathology","volume":null,"pages":null},"PeriodicalIF":3.2,"publicationDate":"2024-02-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139768147","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Identification of a 16-MTGs Prognostic Signature in Diffuse Large B-Cell Lymphoma 弥漫大 B 细胞淋巴瘤 16-MTGs 预后特征的鉴定
IF 3.2 4区 医学 Q2 Medicine Pub Date : 2024-01-18 DOI: 10.1155/2024/4619644
Shijun Wang, Xiaoqin Wang, Guixia Li, Pengcheng Feng
Background. Diffuse large B-cell lymphoma (DLBCL) is one of the largest lymphoma subcategories. Usually, 50%–70% of DLBCL patients can be cured by the standard treatment. But, at least one third have bad prognosis. Based on this situation, the research on DLBCL therapy strategy is still indispensable. Methods. A prognostic signature was built according to the public data and bioinformatics methods, the stability and reliability was assessed and validated. GSEA was performed to explore the difference in different groups. Consensus clustering and immune infiltration analysis were conducted comprehensively. Results. In this work, a signature based on multiple metabolism-associated genes (MTGs) was established, containing 16 MTGs, to predict the prognosis of DLBCL patients. The accuracy and effectiveness of this signature have been verified by three external validation sets. According to the risk formula, DLBCL patients were divided into high- and low-risk groups, and the survival rate of the low-risk group was significantly higher than that of the high-risk group. Furthermore, gene set enrichment analysis (GSEA) demonstrated that beta-alanine metabolism and regulation of actin cytoskeleton signal pathways were enriched in the low-risk group. The actual survival and nomogram-predicted survival matched well both in the training cohort and verification cohorts. Conclusion. In general, our prognostic signature can provide reliable and valuable information for medical workers in predicting the prognosis of DLBCL. A preprint was made available by the research square in the following link: “https://www.researchsquare.com/article/rs-1468741/v2.”
背景。弥漫大B细胞淋巴瘤(DLBCL)是最大的淋巴瘤亚类之一。通常,50%-70%的DLBCL患者可通过标准治疗治愈。但至少有三分之一的患者预后不良。基于这种情况,对 DLBCL 治疗策略的研究仍然不可或缺。研究方法根据公开数据和生物信息学方法建立预后特征,评估并验证其稳定性和可靠性。进行GSEA分析,探讨不同组间的差异。综合进行共识聚类和免疫浸润分析。结果这项研究建立了一个基于多个代谢相关基因(MTGs)的特征,包含16个MTGs,用于预测DLBCL患者的预后。该特征的准确性和有效性已通过三个外部验证集得到验证。根据风险公式,DLBCL 患者被分为高危和低危两组,低危组的生存率明显高于高危组。此外,基因组富集分析(GSEA)显示,β-丙氨酸代谢和肌动蛋白细胞骨架信号通路的调控在低危组中富集。在训练队列和验证队列中,实际存活率和提名图预测的存活率都非常吻合。结论总的来说,我们的预后特征能为医务工作者预测DLBCL的预后提供可靠而有价值的信息。研究方通过以下链接提供了预印本:"https://www.researchsquare.com/article/rs-1468741/v2"。
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Analytical Cellular Pathology
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